# terms

id: PBO:0084064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0084064"}


id: PBO:0018099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acyl-CoA binding binding protein Acb1 (predicted)","termid":"PBO:0018099"}


id: PBO:0077695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNK2 antisense RNA 1","termid":"PBO:0077695"}


id: PBO:0088614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit Sno1","termid":"PBO:0088614"}


id: PBO:0068557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 8, pseudogene","termid":"PBO:0068557"}


id: GO:0018050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-threonine amide by hydrolysis and oxidation of an interior Thr-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0097"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-threonine amidation (obsolete GO:0018050)","termid":"GO:0018050"}


id: GO:0098969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor to the postsynaptic membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport to plasma membrane","termid":"GO:0098877"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"establishment of protein localization to postsynaptic membrane","termid":"GO:1903540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"neurotransmitter receptor transport to postsynaptic membrane","termid":"GO:0098969"}


id: PBO:0059439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A8","termid":"PBO:0059439"}


id: GO:0098843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stably positioned site of clathrin adjacent and physically attached to the postsynaptic specialization, which is the site of endocytosis of post-synaptic proteins.","definition_xrefs":["PMID:17880892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic endocytic zone","termid":"GO:0098843"}


id: PBO:0046884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A10, pseudogene","termid":"PBO:0046884"}


id: PBO:0085402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in remodeling GPI anchors; member of the MBOAT family of putative membrane-bound O-acyltransferases; role in misfolded protein quality control; proposed to be involved in glycerol transport; homolog of the mammalian Hedgehog pathway modulator HHATL; GUP1 has a paralog, GUP2, that arose from the whole genome duplication","termid":"PBO:0085402"}


id: PBO:0091195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp","termid":"PBO:0091195"}


id: PBO:0062320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 2","termid":"PBO:0062320"}


id: PBO:0068732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 3, pseudogene","termid":"PBO:0068732"}


id: PBO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 8","termid":"PBO:0071324"}


id: PBO:0073134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 6","termid":"PBO:0073134"}


id: PBO:0074842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 35A","termid":"PBO:0074842"}


id: PBO:0068438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 8, pseudogene","termid":"PBO:0068438"}


id: GO:0070410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a common mediator SMAD signaling protein.","definition_xrefs":["GOC:vk","PMID:19114992","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"co-SMAD binding","synonyms":[{"name":"common mediator SMAD binding","type":"exact"},{"name":"common partner SMAD binding","type":"exact"},{"name":"common-mediator SMAD binding","type":"exact"},{"name":"common-partner SMAD binding","type":"exact"}],"termid":"GO:0070410"}


id: PR:O43078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- knk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase-like fidgetin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.01","synonyms":[{"name":"Spom972h-knk1","type":"exact"},{"name":"protein sur2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43078"}


id: GO:0052787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown of large alpha-linked polysaccharides by hydrolysis of (1->4)-alpha-D-glucosidic linkages to yield maltopentaose.","definition_xrefs":["GOC:mengo_curators","PMID:7511484","PMID:9406414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alpha-linked polysaccharide catabolism to maltopentaose","synonyms":[{"name":"alpha-amylase-mediated polysaccharide catabolism, producing maltopentaose","type":"exact"},{"name":"maltopentaose-forming alpha-amylase activity","type":"related"}],"termid":"GO:0052787"}


id: FYPO:0005833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"decreased protein transport along microtubule during vegetative growth","termid":"FYPO:0005494"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"decreased protein transport during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005833"}


id: PBO:0087056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L27A; homologous to mammalian ribosomal protein L27, no bacterial homolog; RPL27A has a paralog, RPL27B, that arose from the whole genome duplication","termid":"PBO:0087056"}


id: PBO:0065984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1K pseudogene","termid":"PBO:0065984"}


id: FYPO:0007271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear chromatin organization is abnormal, such regions containing transposons (Tf2 elements) are tethered to the centromere to a greater extent than normal.","definition_xrefs":["PMID:23084836","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased Tf body tethering to centromere","synonyms":[{"name":"increased Tf body tethering to centromere during mitotic cell cycle","type":"related"},{"name":"increased Tf body tethering to centromere during vegetative growth","type":"exact"},{"name":"increased Tf2 body tethering to centromere","type":"exact"},{"name":"increased centromere tethering of Tf2 bodies","type":"exact"}],"termid":"FYPO:0007271"}


id: GO:0010833
data:
  {"annotated_genes":["SJAG_04586","SJAG_01378","SJAG_02194","SJAG_03092","SJAG_02212","SJAG_03685","SJAG_03855","SJAG_05979","SJAG_00939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69071,73457],"is_not":false,"summary":null,"term":"GO:0010833"},{"annotations":[75713],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[110975,106663,70601,95013,103302,86129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"}]},"cv_name":"biological_process","definition":"Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and lengthening the telomeric DNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"telomere maintenance via telomere lengthening","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010833","terms_by_termid":{"GO:0007004":null,"GO:0010833":null,"GO:0032210":null}}


id: PR:Q10343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-AMP-activated protein kinase subunit gamma-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01573","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-AMP-activated protein kinase subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.08c","secondary_identifiers":["UniProtKB:Q10343"],"synonyms":[{"name":"AMPK gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AMPK subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PRKAG1","type":"exact"}],"termid":"PR:Q10343"}


id: GO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dehydration of peptidyl-serine, followed by hydrogenation to produce peptidyl-D-alanine.","definition_xrefs":["RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-D-alanine racemization","termid":"GO:0019122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-D-alanine racemization via peptidyl-L-serine","termid":"GO:0019917"}


id: GO:0007175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor-activated receptor activity","secondary_identifiers":["GO:0007177"],"synonyms":[{"name":"EGF receptor downregulation","type":"exact"},{"name":"down regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"downregulation of epidermal growth factor receptor activity","type":"exact"},{"name":"inhibition of epidermal growth factor receptor activity","type":"narrow"},{"name":"negative regulation of EGF receptor activity","type":"exact"},{"name":"negative regulation of EGFR activity","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007175"}


id: PBO:0084515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm F33D4.7/EMC-6, fly CG11781, human TMEM93","termid":"PBO:0084515"}


id: GO:0141047
data:
  {"annotated_genes":["SJAG_02891","SJAG_01365","SJAG_01226","SJAG_06309","SJAG_03616","SJAG_03971","SJAG_03849","SJAG_00615","SJAG_03843","SJAG_00452","SJAG_02253"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86512,70253,78662,70535,74765,85591,86511,74809,72278,104710,78156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031386"}]},"cv_name":"molecular_function","definition":"A molecular function exhibited by a protein that is covalently attached (AKA tagged or conjugated) to another molecule (for example a protein or a lipid) where it acts as a marker, recognized by the cellular apparatus to target the tagged protein for some cellular process such as modification, sequestration, transport or degradation.","definition_xrefs":["PMID:17632063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_02253":null,"SJAG_02891":null,"SJAG_03616":null,"SJAG_03843":null,"SJAG_03849":null,"SJAG_03971":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular tag activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"covalent modifier","type":"broad"},{"name":"tag","type":"exact"}],"termid":"GO:0141047","terms_by_termid":{"GO:0031386":null}}


id: PBO:0045577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase","termid":"PBO:0045577"}


id: GO:0042572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A.","definition_xrefs":["PMID:1924551","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"retinol metabolic process","secondary_identifiers":["Wikipedia:Retinol"],"synonyms":[{"name":"retinol metabolism","type":"exact"},{"name":"vitamin A1 alcohol metabolic process","type":"exact"},{"name":"vitamin A1 alcohol metabolism","type":"exact"},{"name":"vitamin A1 metabolic process","type":"exact"},{"name":"vitamin A1 metabolism","type":"exact"}],"termid":"GO:0042572"}


id: PBO:0027611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation_during_mitotic_G2_phase_resulting_in_complete_rereplication","termid":"PBO:0027611"}


id: GO:1904266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell chemotaxis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16203995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"regulates","term_name":"Schwann cell chemotaxis","termid":"GO:1990751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell chemotaxis","termid":"GO:1904266"}


id: MOD:01033
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a p-methoxybenzyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p-methoxybenzyl modified residue","synonyms":[{"name":"Mbzl","type":"exact"},{"name":"Mob","type":"exact"}],"termid":"MOD:01033"}


id: GO:0099606
data:
  {"annotated_genes":["SJAG_04884","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90162,105051],"is_not":false,"summary":null,"term":"GO:0099606"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules. This process is part of mitotic metaphase plate congression.","definition_xrefs":["PMID:26705896","GOC:dos","PMID:26258632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04745":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"microtubule plus-end directed mitotic chromosome migration","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"plus-end directed chromosome gliding","type":"exact"}],"termid":"GO:0099606","terms_by_termid":{"GO:0099606":null}}


id: GO:0043561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:tb","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}


id: GO:0140604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the coenzyme mycofactocin, a variably glycosylated small molecule electron pair carrier derived from the C-terminal valine-tyrosine dipeptide of the ribosomally translated precursor peptide MftA.","definition_xrefs":["PMID:27312813","PMID:30778644","PMID:31381312","PMID:33014324","PMID:21223593","PMID:30183269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"cellular nitrogen compound biosynthetic process","termid":"GO:0044271"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mycofactocin biosynthetic process","termid":"GO:0140604"}


id: PBO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php3","termid":"PBO:0001367"}


id: PBO:0048949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 2","termid":"PBO:0048949"}


id: FYPO:0004573
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114419,114421],"is_not":false,"summary":null,"term":"FYPO:0004573"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of non-coding RNA transcribed from telomeric regions measured in a cell is higher than normal.","definition_xrefs":["PMID:25398909","SO:0001927","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":2,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"increased telomeric transcript level","references_by_uniquename":{"PMID:35226668":null},"synonyms":[{"name":"increased telomeric lncRNA level","type":"exact"},{"name":"increased telomeric transcript accumulation","type":"related"},{"name":"increased telomeric transcript level during mitotic cell cycle","type":"related"},{"name":"increased telomeric transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0004573","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null}}


id: GO:0033221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + urea(out) = ADP + phosphate + urea(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transporter activity","termid":"GO:0015204"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled urea transmembrane transporter activity","secondary_identifiers":["RHEA:32803"],"synonyms":[{"name":"ATP-dependent urea transmembrane transporter activity","type":"exact"},{"name":"carbamide-transporting ATPase activity","type":"exact"},{"name":"urea-transporting ATPase activity","type":"exact"}],"termid":"GO:0033221"}


id: PBO:0085206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer mitochondrial membrane GTPase, subunit of the ERMES complex; potential regulatory subunit of the ERMES complex that links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; ortholog of metazoan Miro GTPases","termid":"PBO:0085206"}


id: GO:0044140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in the symbiont's size or mass on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth of symbiont on or near host surface (obsolete GO:0044140)","termid":"GO:0044140"}


id: PBO:0048316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 27","termid":"PBO:0048316"}


id: PBO:0048186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABARAPL1 antisense RNA 1","termid":"PBO:0048186"}


id: PBO:0077690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 2","termid":"PBO:0077690"}


id: FYPO:0005152
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114373],"is_not":false,"summary":null,"term":"FYPO:0005152"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caspofungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"resistance to caspofungin during mitotic cell cycle","type":"related"},{"name":"resistance to caspofungin during vegetative growth","type":"exact"},{"name":"resistant to caspofungin","type":"exact"}],"termid":"FYPO:0005152","terms_by_termid":{"FYPO:0005152":null,"FYPO_EXT:0000002":null}}


id: PBO:0030265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_decamethylenediguanidine","termid":"PBO:0030265"}


id: GO:0019960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X3-C chemokine; C-X3-C chemokines have three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"C-X3-C chemokine binding","termid":"GO:0019960"}


id: PBO:0088886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase","termid":"PBO:0088886"}


id: FYPO:0007875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:34382996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton","termid":"FYPO:0004096"},{"relation_name":"is_a","term_name":"normal protein transport","termid":"FYPO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to actin fusion focus","synonyms":[{"name":"normal protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0007875"}


id: PBO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 16","termid":"PBO:0048281"}


id: PBO:0003407
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extender of the Chronological Lifespan","termid":"PBO:0003407"}


id: PBO:0085964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the high-frequency loss of mini-chromosomes, probably by increasing the rate of proper chromosome segregation; translated gene product of YCR041W, but not its transcript, is responsible for suppression; suppression ability of YCR041W is completely dependent on silencing protein Sir4p","termid":"PBO:0085964"}


id: GO:0000152
data:
  {"annotated_genes":["SJAG_02822","SJAG_02186","SJAG_04661","SJAG_00146","SJAG_03575","SJAG_03858","SJAG_03219","SJAG_01540","SJAG_03350","SJAG_01956","SJAG_03680","SJAG_03561","SJAG_00666","SJAG_04573","SJAG_02162","SJAG_04520","SJAG_00756","SJAG_04180","SJAG_01572","SJAG_02119","SJAG_04574","SJAG_04853","SJAG_03037","SJAG_02651","SJAG_05329","SJAG_01801","SJAG_05012","SJAG_03351","SJAG_05236","SJAG_02591","SJAG_00341","SJAG_02299","SJAG_03809","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90543,97101,77663,76445,77604,70016,72517,72601,87193,108210,75455,78333,77571,89164,63524,102787,70541,107315,78566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005680"},{"annotations":[89745,109063,105606,92085,113743,112670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[97373,105447,104238,93112,86093,100087,89748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"},{"annotations":[105103,86985,92049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033768"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00146":null,"SJAG_00341":null,"SJAG_00666":null,"SJAG_00756":null,"SJAG_01540":null,"SJAG_01572":null,"SJAG_01801":null,"SJAG_01956":null,"SJAG_02119":null,"SJAG_02162":null,"SJAG_02186":null,"SJAG_02299":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03037":null,"SJAG_03219":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03680":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04180":null,"SJAG_04520":null,"SJAG_04573":null,"SJAG_04574":null,"SJAG_04661":null,"SJAG_04853":null,"SJAG_05012":null,"SJAG_05236":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000152","terms_by_termid":{"GO:0005680":null,"GO:0033768":null,"GO:0043224":null,"GO:0043494":null}}


id: PBO:0064321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 3","termid":"PBO:0064321"}


id: PBO:0055183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2607","termid":"PBO:0055183"}


id: GO:1990057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle regulatory process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of DNA damage from environmental insults or errors during metabolism.","definition_xrefs":["GOC:rph","PMID:10630641"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest in response to DNA damage stimulus (obsolete GO:1990057)","synonyms":[{"name":"cell cycle arrest in response to DNA damage stimulus","type":"exact"}],"termid":"GO:1990057"}


id: PBO:0079067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-1","termid":"PBO:0079067"}


id: PBO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 11, pseudogene","termid":"PBO:0047720"}


id: PBO:0040358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 7","termid":"PBO:0040358"}


id: SO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_J_cluster","synonyms":[{"name":"(VJ)-J-CLUSTER","type":"exact"},{"name":"VJ J cluster","type":"exact"}],"termid":"SO:0000491"}


id: PR:O74427
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uridine-cytidine kinase-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10285:SF17","OMA:SCHPO04726","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.11c","secondary_identifiers":["UniProtKB:O74427"],"synonyms":[{"name":"Spom972h-UCKL1","type":"exact"},{"name":"uridine monophosphokinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74427"}


id: GO:0034702
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective monoatomic ion transport down its electrochemical gradient.","definition_xrefs":["GOC:mah","ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"monoatomic ion channel complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0034702","terms_by_termid":{"GO:0005891":null}}


id: GO:0032080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of type I restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032073"},{"relation_name":"is_a","term_name":"regulation of type I site-specific deoxyribonuclease activity","termid":"GO:0032084"},{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type I site-specific deoxyribonuclease activity","synonyms":[{"name":"down regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type I restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type I restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type I restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032080"}


id: PBO:0058004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3927","termid":"PBO:0058004"}


id: PBO:0088476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex zf-CCCH type zinc finger subunit Red5","termid":"PBO:0088476"}


id: PBO:0091981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body protein Dms1","termid":"PBO:0091981"}


id: PR:O60155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prs1 gene.","definition_xrefs":["UniProtKB:O60155","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase C19C7.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.06","synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-prs1","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60155"}


id: GO:0110054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament annealing, i.e. the end-to-end joining of existing actin filaments.","definition_xrefs":["PMID:11575927","PMID:15743909","GOC:mah","PMID:10585915","PMID:19244341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament annealing","termid":"GO:0110054"}


id: PBO:0048503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 3","termid":"PBO:0048503"}


id: GO:1903823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Single strand break repair that takes place in a telomere.","definition_xrefs":["PMID:24374808","GO_REF:0000062","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"telomere single strand break repair","synonyms":[{"name":"single strand break repair in telomere","type":"exact"},{"name":"telomere SSBR","type":"related"},{"name":"telomere single-strand break repair","type":"exact"},{"name":"telomeric single strand break repair","type":"exact"}],"termid":"GO:1903823"}


id: PBO:0087088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L6A; N-terminally acetylated; binds 5.8S rRNA; homologous to mammalian ribosomal protein L6, no bacterial homolog; RPL6A has a paralog, RPL6B, that arose from the whole genome duplication","termid":"PBO:0087088"}


id: PBO:0059231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L2 pseudogene 1","termid":"PBO:0059231"}


id: FYPO:0002796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is abnormal when the cell is subject to nitrogen starvation. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein degradation during nitrogen starvation","synonyms":[{"name":"abnormal protein breakdown during nitrogen starvation","type":"exact"},{"name":"abnormal protein catabolic process during nitrogen starvation","type":"exact"},{"name":"abnormal protein catabolism during nitrogen starvation","type":"exact"},{"name":"abnormal protein degradation during nitrogen depletion","type":"exact"},{"name":"abnormal protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002796"}


id: PBO:0011437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, sensor for unfolded proteins in the ER Ire1","termid":"PBO:0011437"}


id: PBO:0089317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body associated protein Pby1","termid":"PBO:0089317"}


id: PBO:0064009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 43","termid":"PBO:0064009"}


id: GO:0102057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-valine + ATP(4-) + a jasmonic acid = AMP(2-) + diphosphoric acid + a jasmonoyl-valine.","definition_xrefs":["PMID:17291501","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete jasmonoyl-valine synthetase activity (obsolete GO:0102057)","termid":"GO:0102057"}


id: PBO:0067529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 673, pseudogene","termid":"PBO:0067529"}


id: PBO:0002651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant protein kinase 19 family protein","termid":"PBO:0002651"}


id: PR:Q09854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1527.01","synonyms":[{"name":"Spom972h-mok11","type":"exact"}],"termid":"PR:Q09854"}


id: GO:0071812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of fever generation via positive regulation of the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fever generation","termid":"GO:0031622"},{"relation_name":"is_a","term_name":"positive regulation of prostaglandin secretion","termid":"GO:0032308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fever generation by positive regulation of prostaglandin secretion","termid":"GO:0071812"}


id: PBO:0044478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 21 subfamily A member 1, pseudogene","termid":"PBO:0044478"}


id: PBO:0049404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1C","termid":"PBO:0049404"}


id: PBO:0068824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 62, pseudogene","termid":"PBO:0068824"}


id: PBO:0017554
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bypass of Yeast Ras","termid":"PBO:0017554"}


id: PBO:0031783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cytokinesis","termid":"PBO:0031783"}


id: FYPO:0008156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to glucose starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:18820678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to glucose starvation","termid":"FYPO:0008156"}


id: GO:1903017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exo-alpha-sialidase activity.","definition_xrefs":["GOC:rl","PMID:23544079","GOC:TermGenie","GO_REF:0000059","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of exo-alpha-sialidase activity","termid":"GO:1903015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of exo-alpha-sialidase activity","synonyms":[{"name":"activation of N-acylneuraminate glycohydrolase activity","type":"narrow"},{"name":"activation of acetylneuraminidase activity","type":"narrow"},{"name":"activation of acetylneuraminyl hydrolase activity","type":"narrow"},{"name":"activation of alpha-neuraminidase activity","type":"narrow"},{"name":"activation of exo-alpha-sialidase activity","type":"narrow"},{"name":"activation of neuraminidase activity","type":"narrow"},{"name":"activation of sialidase activity","type":"narrow"},{"name":"positive regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"positive regulation of acetylneuraminidase activity","type":"exact"},{"name":"positive regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"positive regulation of alpha-neuraminidase activity","type":"exact"},{"name":"positive regulation of neuraminidase activity","type":"exact"},{"name":"positive regulation of sialidase activity","type":"exact"},{"name":"up regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"up regulation of acetylneuraminidase activity","type":"exact"},{"name":"up regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"up regulation of alpha-neuraminidase activity","type":"exact"},{"name":"up regulation of exo-alpha-sialidase activity","type":"exact"},{"name":"up regulation of neuraminidase activity","type":"exact"},{"name":"up regulation of sialidase activity","type":"exact"},{"name":"up-regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"up-regulation of acetylneuraminidase activity","type":"exact"},{"name":"up-regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"up-regulation of alpha-neuraminidase activity","type":"exact"},{"name":"up-regulation of exo-alpha-sialidase activity","type":"exact"},{"name":"up-regulation of neuraminidase activity","type":"exact"},{"name":"up-regulation of sialidase activity","type":"exact"},{"name":"upregulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"upregulation of acetylneuraminidase activity","type":"exact"},{"name":"upregulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"upregulation of alpha-neuraminidase activity","type":"exact"},{"name":"upregulation of exo-alpha-sialidase activity","type":"exact"},{"name":"upregulation of neuraminidase activity","type":"exact"},{"name":"upregulation of sialidase activity","type":"exact"}],"termid":"GO:1903017"}


id: GO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products.","definition_xrefs":["EC:3.1.22.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"deoxyribonuclease II activity","secondary_identifiers":["MetaCyc:3.1.22.1-RXN"],"synonyms":[{"name":"DNase II activity","type":"related"},{"name":"acid DNase activity","type":"related"},{"name":"acid deoxyribonuclease activity","type":"related"},{"name":"deoxyribonucleate 3'-nucleotidohydrolase activity","type":"related"},{"name":"lysosomal DNase II activity","type":"narrow"},{"name":"pancreatic DNase II","type":"related"}],"termid":"GO:0004531"}


id: PBO:0036338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal-dependent protein hydrolase family protein, human C12orf10 ortholog","termid":"PBO:0036338"}


id: PBO:0030557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_amino_acid_import_during_nitrogen_starvation","termid":"PBO:0030557"}


id: GO:0004114
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004115"},{"annotations":[77540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside 3',5'-cyclic phosphate + H2O = a nucleoside 5'-phosphate.","definition_xrefs":["RHEA:14653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"3',5'-cyclic-nucleotide phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.1.4.17-RXN","Reactome:R-HSA-162425","EC:3.1.4.17"],"synonyms":[{"name":"3', 5'-cyclic nucleoside monophosphate phosphodiesterase activity","type":"related"},{"name":"3',5' cyclic-nucleotide phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-nucleotide 5'-nucleotidohydrolase activity","type":"related"},{"name":"3',5'-cyclonucleotide phosphodiesterase activity","type":"related"},{"name":"3',5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"3': 5'-monophosphate phosphodiesterase (cyclic CMP) activity","type":"related"},{"name":"3':5'-cyclic nucleotide 5'-nucleotidohydrolase activity","type":"related"},{"name":"PDE","type":"related"},{"name":"cyclic 3',5'-mononucleotide phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5'-phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5-nucleotide monophosphate phosphodiesterase activity","type":"related"},{"name":"cyclic AMP phosphodiesterase activity","type":"narrow"},{"name":"cyclic nucleotide phosphodiesterase activity","type":"related"},{"name":"cytidine 3':5'-monophosphate phosphodiesterase (cyclic CMP) activity","type":"related"},{"name":"nucleoside 3',5'-cyclic phosphate diesterase activity","type":"related"},{"name":"nucleoside-3',5-monophosphate phosphodiesterase activity","type":"related"}],"termid":"GO:0004114","terms_by_termid":{"GO:0004115":null,"GO:0047555":null}}


id: PBO:0069175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 429, pseudogene","termid":"PBO:0069175"}


id: GO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of an oxidizable substrate, for example, fructose.","definition_xrefs":["GOC:jl","PMID:11029423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to oxidizable substrate","synonyms":[{"name":"taxis in response to oxidizable substrate","type":"exact"}],"termid":"GO:0042333"}


id: GO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of veins of the heart are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vein morphogenesis","termid":"GO:0003169"}


id: GO:0060693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of branching morphogenesis in the salivary gland epithelium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}


id: PBO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vid27 family protein","termid":"PBO:0003228"}


id: GO:0060757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior by which an adult locates food.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult foraging behavior","termid":"GO:0060757"}


id: GO:2000949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"negatively_regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of xyloglucan metabolic process","synonyms":[{"name":"negative regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000949"}


id: GO:0021980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of cells from one site to another in the subpallium.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium cell migration","termid":"GO:0021980"}


id: SOFP:orf_classification
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"gene call confidence flag","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf_classification","termid":"SOFP:orf_classification"}


id: PBO:0109622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 2B (pseudogene)","termid":"PBO:0109622"}


id: PBO:0054001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1326","termid":"PBO:0054001"}


id: PBO:0058780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7114","termid":"PBO:0058780"}


id: PBO:0058574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511b-2","termid":"PBO:0058574"}


id: GO:0044573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biochemical reactions and pathways resulting in the formation of a P-cluster of a nitrogenase, a high-nuclearity, Fe/S-only cluster that can be viewed as two [4Fe-4S] sub-clusters sharing a gamma-6-sulfide.","definition_xrefs":["PMID:17563349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"nitrogenase P cluster assembly","synonyms":[{"name":"nitrogenase P cluster biosynthesis","type":"exact"},{"name":"nitrogenase P cluster maturation","type":"exact"}],"termid":"GO:0044573"}


id: GO:0033080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division in the thymus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature T cell proliferation","termid":"GO:0033079"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation in thymus","synonyms":[{"name":"thymic T cell proliferation","type":"exact"},{"name":"thymocyte cell proliferation","type":"exact"},{"name":"thymocyte proliferation","type":"exact"}],"termid":"GO:0033080"}


id: GO:0044382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a CLRC complex is transported to, or maintained in, heterochromatin. CLRC complex is an active cullin-dependent E3 ubiquitin ligase complex essential for heterochromatin assembly by RNAi and histone H3K9 methylation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"CLRC complex localization to heterochromatin","synonyms":[{"name":"CLRC ubiquitin ligase complex localisation to heterochromatin","type":"exact"},{"name":"CLRC ubiquitin ligase complex localization to heterochromatin","type":"exact"}],"termid":"GO:0044382"}


id: PBO:0071060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 62","termid":"PBO:0071060"}


id: PATO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000357 protein concentration value (obsolete PATO:0000357)","termid":"PATO:0000357"}


id: GO:0044427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a chromosome, a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosomal part (obsolete GO:0044427)","synonyms":[{"name":"chromosomal component","type":"exact"},{"name":"chromosome component","type":"exact"},{"name":"chromosome part","type":"exact"}],"termid":"GO:0044427"}


id: GO:0030637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of derivatives of acetic acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate derivative catabolic process (obsolete GO:0030637)","synonyms":[{"name":"acetate derivative breakdown","type":"exact"},{"name":"acetate derivative catabolic process","type":"exact"},{"name":"acetate derivative catabolism","type":"exact"},{"name":"acetate derivative degradation","type":"exact"}],"termid":"GO:0030637"}


id: PBO:0086479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial ribosomal protein of the large subunit; required for respiratory growth and for efficient translation of mitochondrial COX1 and COX3;  conditional mutant has reduced cytochrome c oxidase activity; protein increases in abundance and relocalizes to the plasma membrane upon DNA replication stress; contains and N-terminal mitochondrial targeting sequence; similar to E. coli L34 ribosomal protein","termid":"PBO:0086479"}


id: GO:0004735
data:
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id: PBO:0036191
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id: GO:1901734
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remodelling","type":"exact"}],"termid":"GO:0006338","terms_by_termid":{"GO:0000183":null,"GO:0006334":null,"GO:0006337":null,"GO:0006338":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0034080":null,"GO:0034728":null,"GO:0040029":null,"GO:0045814":null,"GO:0045815":null,"GO:0060906":null,"GO:0061186":null,"GO:0061188":null,"GO:0070828":null,"GO:0090052":null,"GO:0140462":null,"GO:0140673":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0140861":null,"GO:0140898":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: PBO:0065288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 3","termid":"PBO:0065288"}


id: GO:0046305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"alkanesulfonate biosynthetic process","synonyms":[{"name":"alkanesulfonate anabolism","type":"exact"},{"name":"alkanesulfonate biosynthesis","type":"exact"},{"name":"alkanesulfonate formation","type":"exact"},{"name":"alkanesulfonate synthesis","type":"exact"},{"name":"alkanesulphonate biosynthesis","type":"exact"},{"name":"alkanesulphonate biosynthetic process","type":"exact"}],"termid":"GO:0046305"}


id: PBO:0091832
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HAP5","termid":"PBO:0091832"}


id: PBO:0033760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_meiosis_I","termid":"PBO:0033760"}


id: PBO:0056914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC-induced long non-coding RNA","termid":"PBO:0056914"}


id: PBO:0052697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 5","termid":"PBO:0052697"}


id: PBO:0056786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 3","termid":"PBO:0056786"}


id: PBO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glucose_import","termid":"PBO:0030818"}


id: SO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor rearranged gene cluster","type":"exact"}],"termid":"SO:0000938"}


id: MOD:01468
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide) (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:2211698","PubMed:14235557","PubMed:8052647","PubMed:9036855","RESID:AA0248#CYS","Unimod:415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-selenocysteine residue","termid":"MOD:02073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide) (Cys)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD+Delta:S(-1)Se(1)","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-selenocysteinyl-Se-molybdenum","type":"exact"},{"name":"formate dehydrogenase selenocysteine molybdenum cofactor","type":"exact"},{"name":"molybdopterin-se","type":"related"}],"termid":"MOD:01468"}


id: PR:O43047
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GrpE protein homolog 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE protein homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.19","secondary_identifiers":["UniProtKB:O43047"],"synonyms":[{"name":"Spom972h-GRPEL1","type":"exact"}],"termid":"PR:O43047"}


id: PBO:0035724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_HSE_promoter","termid":"PBO:0035724"}


id: GO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Relaying of environmental signals promoting filamentous growth.","definition_xrefs":["PMID:9728395","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction involved in filamentous growth","synonyms":[{"name":"MAPKKK cascade (pseudohyphal growth)","type":"related"},{"name":"signal transduction during filamentous growth","type":"related"}],"termid":"GO:0001402"}


id: PBO:0056841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member F, pseudogene","termid":"PBO:0056841"}


id: PBO:0056228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member H1","termid":"PBO:0056228"}


id: GO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oleic acid","termid":"GO:0034201"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oleic acid","synonyms":[{"name":"cellular response to oleate","type":"exact"}],"termid":"GO:0071400"}


id: GO:0045278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the respiratory chain located in the plasma membrane, containing the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2). Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex IV","termid":"GO:0045277"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane respirasome","termid":"GO:0070470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex IV","secondary_identifiers":["GO:0045288"],"synonyms":[{"name":"cytochrome c oxidase complex","type":"broad"},{"name":"respiratory chain complex IV","type":"broad"}],"termid":"GO:0045278"}


id: GO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible reaction: (R,R)-butane-2,3-diol + NAD+ = (R)-acetoin + NADH + H+.","definition_xrefs":["EC:1.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R,R)-butanediol dehydrogenase activity","secondary_identifiers":["MetaCyc:RR-BUTANEDIOL-DEHYDROGENASE-RXN","RHEA:24340"],"synonyms":[{"name":"(R)-2,3-butanediol dehydrogenase activity","type":"related"},{"name":"(R)-diacetyl reductase activity","type":"related"},{"name":"1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"1-amino-2-propanol oxidoreductase activity","type":"related"},{"name":"2,3-butanediol dehydrogenase activity","type":"related"},{"name":"D-(-)-butanediol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol:NAD(2) oxidoreductase activity","type":"related"},{"name":"D-aminopropanol dehydrogenase activity","type":"related"},{"name":"D-butanediol dehydrogenase activity","type":"related"},{"name":"aminopropanol oxidoreductase activity","type":"related"},{"name":"butylene glycol dehydrogenase activity","type":"related"},{"name":"butyleneglycol dehydrogenase activity","type":"related"},{"name":"diacetyl (acetoin) reductase activity","type":"related"}],"termid":"GO:0000721"}


id: PATO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's placement which is defined by the angle between the bearer and an axis, or the angle between the bearer and another object.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orientation","secondary_identifiers":["PATO:0000137"],"synonyms":[{"name":"amount of rotation","type":"related"},{"name":"angle","type":"related"},{"name":"angular magnitude","type":"related"},{"name":"angular placement","type":"exact"},{"name":"plane angle","type":"related"}],"termid":"PATO:0000133"}


id: FYPO:0006740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is increased.","definition_xrefs":["PMID:30134042","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at promoter","termid":"FYPO:0007506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at MCB promoters during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at MCB target genes during vegetative growth","type":"related"},{"name":"increased protein localization to chromatin at MCB-containing promoters during vegetative growth","type":"exact"}],"termid":"FYPO:0006740"}


id: PBO:0091730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam6","termid":"PBO:0091730"}


id: GO:0033909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,2-alpha-L-fucoside linkages in fucoidan without release of sulfate.","definition_xrefs":["PMID:11910806","PMID:6417453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"fucoidanase activity","secondary_identifiers":["EC:3.2.1.211","MetaCyc:RXN-20949"],"synonyms":[{"name":"poly(1,2-alpha-L-fucoside-4-sulfate) glycanohydrolase activity","type":"related"}],"termid":"GO:0033909"}


id: PBO:0005790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex Epl1","termid":"PBO:0005790"}


id: PBO:0012236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A Ppa1","termid":"PBO:0012236"}


id: GO:2001210
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id: PBO:0045591
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id: GO:0044289
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id: PBO:0004964
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id: PBO:0044168
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id: PBO:0027664
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id: GO:0000003
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id: GO:0099632
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id: PBO:0040954
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 25","termid":"PBO:0040954"}


id: PBO:0061306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide FF-amide peptide precursor","termid":"PBO:0061306"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: GO:0080181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in lateral roots.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"part_of","term_name":"lateral root morphogenesis","termid":"GO:0010102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root branching","termid":"GO:0080181"}


id: GO:1902677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left caudal flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:5961344","PMID:16607022","GOC:TermGenie","ISBN:9780124260207","GOC:giardia","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left caudal flagellum","termid":"GO:0097560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"left caudal basal body","synonyms":[{"name":"cilial basal body of left caudal cilium","type":"exact"},{"name":"cilial basal body of left caudal flagellum","type":"exact"},{"name":"ciliary basal body of left caudal cilium","type":"exact"},{"name":"ciliary basal body of left caudal flagellum","type":"exact"},{"name":"cilium basal body of left caudal cilium","type":"exact"},{"name":"cilium basal body of left caudal flagellum","type":"exact"},{"name":"left caudal flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left caudal cilium","type":"exact"},{"name":"microtubule basal body of left caudal flagellum","type":"exact"}],"termid":"GO:1902677"}


id: PBO:0046937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM53B antisense RNA 1","termid":"PBO:0046937"}


id: PBO:0067786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 88","termid":"PBO:0067786"}


id: PBO:0050549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparanase","termid":"PBO:0050549"}


id: FYPO:0005219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is shorter than normal.","definition_xrefs":["SO:0000673","PMID:26582768","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0003048","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcript length","synonyms":[{"name":"short transcript","type":"exact"},{"name":"shortened transcript","type":"exact"}],"termid":"FYPO:0005219"}


id: GO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Neu/ErbB-2 receptor activity (obsolete GO:0005012)","synonyms":[{"name":"Neu/ErbB-2 receptor activity","type":"exact"}],"termid":"GO:0005012"}


id: PBO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytochelatin synthetase","termid":"PBO:0001256"}


id: PBO:0041699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 5","termid":"PBO:0041699"}


id: PBO:0042479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 5","termid":"PBO:0042479"}


id: GO:0075015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a symbiont structure that serves to infect its host organism. It includes physiological, developmental, and morphological changes of the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of infection structure","synonyms":[{"name":"formation by symbiont of infection structure on or near host","type":"related"},{"name":"formation of host infection structure","type":"exact"},{"name":"formation of host penetration structure","type":"related"},{"name":"formation of infection structure on or near host","type":"related"}],"termid":"GO:0075015"}


id: PBO:0030222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_guanosine-diphosphatase_activity","termid":"PBO:0030222"}


id: GO:0033538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside, by a pathway in which galactan:galactan galactosyltransferase catalyzes chain elongation by transferring the alpha-galactosyl residue of one raffinose-family oligosaccharide to another.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ajugose biosynthetic process","termid":"GO:0033536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"ajugose biosynthetic process using galactan:galactan galactosyltransferase","synonyms":[{"name":"ajugose anabolism using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose biosynthesis using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose formation using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose synthesis using galactan:galactan galactosyltransferase","type":"exact"}],"termid":"GO:0033538"}


id: PBO:0038907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E2","termid":"PBO:0038907"}


id: PBO:0017014
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Orc4 binds to the T-rich strand of replication origins throughout the cell cycle","termid":"PBO:0017014"}


id: PBO:0079372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 7","termid":"PBO:0079372"}


id: GO:0055061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:ai","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete di-, tri-valent inorganic anion homeostasis (obsolete GO:0055061)","synonyms":[{"name":"di-, tri-valent inorganic anion homeostasis","type":"exact"}],"termid":"GO:0055061"}


id: GO:0032437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense network of actin filaments found beneath the apical cell surface of hair cells, and into which stereocilia are inserted.","definition_xrefs":["PMID:8071151","PMID:12485990","PMID:2592408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0015629","GO:0005938"],"is_obsolete":false,"name":"cuticular plate","termid":"GO:0032437"}


id: GO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes specifically on the paternal X-chromosome in the XX sex.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of paternal X chromosome (obsolete GO:0060817)","termid":"GO:0060817"}


id: PBO:0068879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 119, pseudogene","termid":"PBO:0068879"}


id: GO:0007174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of epidermal growth factor (EGF), following internalization of the receptor-bound ligand into the signal-receiving cell. Full breakdown of epidermal growth factor results in a ligand that is unable to bind and activate its receptor.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:2985587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0030163","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor catabolic process","synonyms":[{"name":"EGF breakdown","type":"exact"},{"name":"EGF catabolism","type":"exact"},{"name":"EGF receptor ligand processing","type":"related"},{"name":"epidermal growth factor breakdown","type":"exact"},{"name":"epidermal growth factor catabolism","type":"exact"},{"name":"epidermal growth factor ligand processing","type":"related"},{"name":"intracellular EGF processing","type":"related"},{"name":"receptor-mediated EGF processing","type":"related"}],"termid":"GO:0007174"}


id: PBO:0091968
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"III:g.1774235_1774236insGATC","termid":"PBO:0091968"}


id: PR:O60175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein Hikeshi that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein OPI10 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.06c","secondary_identifiers":["UniProtKB:O60175"],"synonyms":[{"name":"Spom972h-C11orf73","type":"exact"}],"termid":"PR:O60175"}


id: MOD:01005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butylsulfenyl","synonyms":[{"name":"StBu","type":"exact"}],"termid":"MOD:01005"}


id: PBO:0028846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snRNA_splicing","termid":"PBO:0028846"}


id: GO:0034212
data:
  {"annotated_genes":["SJAG_00676","SJAG_02990","SJAG_02773","SJAG_04131","SJAG_04179","SJAG_04631","SJAG_01826","SJAG_03537","SJAG_02165","SJAG_03546","SJAG_02726","SJAG_01204"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[73518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[86870,86244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[86871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[94290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[72209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[86872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[73515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[83985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[71600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046972"},{"annotations":[83986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[83987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[71906,76618,105549,112960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[76111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[76110,73517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"}]},"cv_name":"molecular_function","definition":"Catalysis of the acetylation of an amino acid residue of a peptide or protein, according to the reaction: acetyl-CoA + peptide = CoA + N-acetylpeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_01204":null,"SJAG_01826":null,"SJAG_02165":null,"SJAG_02726":null,"SJAG_02773":null,"SJAG_02990":null,"SJAG_03537":null,"SJAG_03546":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04631":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"peptide N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9760081","Reactome:R-HSA-3371554"],"termid":"GO:0034212","terms_by_termid":{"GO:0004402":null,"GO:0004596":null,"GO:0010485":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046972":null,"GO:1990189":null,"GO:1990190":null}}


id: GO:0036019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An transient hybrid organelle formed by fusion of a late endosome with a lysosome, and in which active degradation takes place.","definition_xrefs":["GOC:pde","PMID:21878991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"},{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endolysosome","termid":"GO:0036019"}


id: PBO:0041199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD23 rRNA methyltransferase and ribosome maturation factor","termid":"PBO:0041199"}


id: FYPO:0001834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal phosphoglycerate mutase activity","termid":"FYPO:0001834"}


id: PATO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an identical molecule in an adjacent cell.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular adhesivity","termid":"PATO:0001531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homophilic","termid":"PATO:0001440"}


id: PBO:0082598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin adaptor (adaptin) accessory protein; physically interacts with and is involved in localization of clathrin adaptor protein complex-1 (AP-1); green fluorescent protein (GFP)-fusion protein colocalizes with clathrin-coated vesicles","termid":"PBO:0082598"}


id: GO:0042975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peroxisome proliferator activated receptor, alpha, beta or gamma.","definition_xrefs":["GOC:jl","PMID:12769781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"peroxisome proliferator activated receptor binding","synonyms":[{"name":"PPAR binding","type":"exact"}],"termid":"GO:0042975"}


id: PBO:0108958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_insertion_and_mutation","termid":"PBO:0108958"}


id: GO:1990333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the spindle checkpoint, preventing the activation of the anaphase-promoting complex until all chromosomes are correctly attached in a bipolar fashion to the mitotic spindle. In budding yeast this complex consists of Mad2p and Cdc20p, and in mammalian cells it consists of MAD2 and CDC20.","definition_xrefs":["GOC:bhm","PMID:15879521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"mitotic checkpoint complex","termid":"GO:0033597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitotic checkpoint complex, CDC20-MAD2 subcomplex","synonyms":[{"name":"CDC20-MAD2 complex","type":"exact"}],"termid":"GO:1990333"}


id: PBO:0057926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3651","termid":"PBO:0057926"}


id: PBO:0026726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0026726"}


id: PBO:0088859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1","termid":"PBO:0088859"}


id: PBO:0079251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC23 antisense RNA 1","termid":"PBO:0079251"}


id: PBO:0071138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 1","termid":"PBO:0071138"}


id: PBO:0027009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_tethering_at_nuclear_periphery","termid":"PBO:0027009"}


id: GO:0005536
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89933,93343],"is_not":false,"summary":null,"term":"GO:0005536"}]},"cv_name":"molecular_function","definition":"Binding to D- or L-enantiomers of glucose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glucose binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005536","terms_by_termid":{"GO:0005536":null}}


id: PBO:0064880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 catalytic subunit alpha","termid":"PBO:0064880"}


id: PBO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITIH4 antisense RNA 1","termid":"PBO:0051933"}


id: PBO:0039033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 10, pseudogene","termid":"PBO:0039033"}


id: PBO:0050969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 4","termid":"PBO:0050969"}


id: PBO:0090406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex/COPII-coated vesicle component/nuclear pore outer ring WD repeat protein Sec13","termid":"PBO:0090406"}


id: FYECO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which uracil was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited uracil","termid":"FYECO:0000316"}


id: PBO:0005704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof6","termid":"PBO:0005704"}


id: GO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed inner ear sensory epithelia.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}


id: GO:0006054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N-acetylneuraminate metabolic process","synonyms":[{"name":"N-acetylneuraminate metabolism","type":"exact"},{"name":"sialic acid metabolic process","type":"broad"},{"name":"sialic acid metabolism","type":"broad"}],"termid":"GO:0006054"}


id: PBO:0003610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sec31 (predicted)","termid":"PBO:0003610"}


id: MOD:01897
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["RESID:AA0473","PubMed:7592021","PubMed:21788474","PubMed:8557573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"5-hydroxy-3-methyl-L-proline","termid":"MOD:01905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline (Ile)","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro(Ile)","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01897"}


id: PBO:0059898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 21","termid":"PBO:0059898"}


id: PR:O42882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.05c","synonyms":[{"name":"Spom972h-SPAC8E11.05c","type":"exact"}],"termid":"PR:O42882"}


id: GO:0052856
data:
  {"annotated_genes":["SJAG_02462"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72937],"is_not":false,"summary":null,"term":"GO:0052856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-NADHX = (S)-NADHX.","definition_xrefs":["PMID:21994945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NADHX epimerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:5.1.99.6","RHEA:32215"],"termid":"GO:0052856","terms_by_termid":{"GO:0052856":null}}


id: GO:0034412
data:
  {"annotated_genes":["SJAG_04666","SJAG_04483","SJAG_04771","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104458],"is_not":false,"summary":null,"term":"GO:0034412"},{"annotations":[89863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[83091,87853],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030437","GO:0005975","GO:0007049","GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan anabolism","type":"exact"},{"name":"ascospore wall beta-glucan biosynthesis","type":"exact"},{"name":"ascospore wall beta-glucan formation","type":"exact"},{"name":"ascospore wall beta-glucan synthesis","type":"exact"}],"termid":"GO:0034412","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: SO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base of the terminator codon (stop) is changed, resulting in an elongated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"feature_elongation","termid":"SO:0001907"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_lost","secondary_identifiers":["http://vat.gersteinlab.org/formats.php","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:stoploss","type":"exact"},{"name":"Jannovar:stop_lost","type":"exact"},{"name":"Seattleseq:stop-lost","type":"exact"},{"name":"Seattleseq:stop-lost-near-splice","type":"related"},{"name":"VAAST:stop_lost","type":"exact"},{"name":"VAT:removedStop","type":"exact"},{"name":"VEP:stop_lost","type":"exact"},{"name":"snpEff:STOP_LOST","type":"exact"},{"name":"stop codon lost","type":"exact"},{"name":"stop lost","type":"exact"}],"termid":"SO:0001578"}


id: GO:0005247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic anion channel activity","termid":"GO:0008308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated chloride channel activity","secondary_identifiers":["Reactome:R-HSA-2744228"],"synonyms":[{"name":"voltage gated chloride channel activity","type":"exact"},{"name":"voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:0005247"}


id: PBO:0003262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 family phosphatase Ibp1","termid":"PBO:0003262"}


id: PR:O14085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.02 gene.","definition_xrefs":["UniProtKB:O14085","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.02","synonyms":[{"name":"Spom972h-SPAC2F3.02","type":"exact"}],"termid":"PR:O14085"}


id: GO:0019112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrol + glucose = phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenanthrol glycosyltransferase activity","termid":"GO:0019112"}


id: GO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of low molecular mass.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"low molecular weight kininogen binding","synonyms":[{"name":"LMW kininogen binding","type":"exact"},{"name":"LK binding","type":"exact"}],"termid":"GO:0030986"}


id: PBO:0077550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 258","termid":"PBO:0077550"}


id: GO:0044296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization found in some types of dendrites which consists of numerous small terminal branches, giving the dendrite a tufted appearance.","definition_xrefs":["NIF_Subcellular:sao1340260079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tuft","synonyms":[{"name":"dendrite tuft","type":"exact"}],"termid":"GO:0044296"}


id: FYPO:0003815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the S phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is decreased. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072429","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased response to S-phase DNA damage checkpoint signaling","synonyms":[{"name":"decreased S-phase DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"decreased response to intra-S DNA damage checkpoint signaling","type":"exact"},{"name":"decreased response to mitotic S-phase DNA damage checkpoint signaling","type":"exact"},{"name":"reduced response to intra-S DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0003815"}


id: GO:0061466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a cell junction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of cell junction (obsolete GO:0061466)","termid":"GO:0061466"}


id: GO:0031730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR5 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CCR5 chemokine receptor binding","synonyms":[{"name":"CCR5 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031730"}


id: GO:0060859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of the directed movement of substances within a cell by a cellular process that begins with the formation of membrane-bounded vesicles in which the transported substances are enclosed or located in the vesicle membrane which are then targeted to, and fuse with, an acceptor membrane contributing to the shedding of a floral organ.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport involved in floral organ abscission (obsolete GO:0060859)","termid":"GO:0060859"}


id: PBO:0040346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 3","termid":"PBO:0040346"}


id: SO:1000027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from guanine to thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_T_transversion","synonyms":[{"name":"G to T transversion","type":"exact"}],"termid":"SO:1000027"}


id: PBO:0047845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formyl peptide receptor 1","termid":"PBO:0047845"}


id: PBO:0058308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4681","termid":"PBO:0058308"}


id: PBO:0083039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the coatomer complex (COPI); COPI coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER","termid":"PBO:0083039"}


id: PBO:0047314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 3","termid":"PBO:0047314"}


id: PBO:0088142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar RNase of the T(2) family; relocalizes to the cytosol where it cleaves tRNAs upon oxidative or stationary phase stress; required for tRNA-specific translational pausing during oxidative stress; promotes apoptosis under stress conditions and this function is independent of Rny1p catalytic activity","termid":"PBO:0088142"}


id: PBO:0034477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_microtubule_depolymerization_during_anaphase_A","termid":"PBO:0034477"}


id: PR:O60166
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nud3 gene.","definition_xrefs":["UniProtKB:O60166","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear movement protein nudc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.02","synonyms":[{"name":"Spom972h-nud3","type":"exact"},{"name":"nuclear distribution protein C homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60166"}


id: GO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates peroxisome organization.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by transcription from RNA polymerase II promoter (obsolete GO:0100004)","termid":"GO:0100004"}


id: PBO:0081319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 2","termid":"PBO:0081319"}


id: GO:0021586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the pons to attain its fully functional state. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"},{"relation_name":"part_of","term_name":"hindbrain maturation","termid":"GO:0021578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons maturation","termid":"GO:0021586"}


id: PBO:0072486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 15","termid":"PBO:0072486"}


id: _global:assayed_protein
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and a protein gene product with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_protein","termid":"_global:assayed_protein"}


id: PBO:0059910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 33","termid":"PBO:0059910"}


id: PBO:0005350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-factor pheromone Map2","termid":"PBO:0005350"}


id: GO:0010494
data:
  {"annotated_genes":["SJAG_01512","SJAG_03424","SJAG_04480","SJAG_03498","SJAG_02628","SJAG_01026","SJAG_00686","SJAG_02263","SJAG_00391","SJAG_01650","SJAG_00474","SJAG_04772","SJAG_03762","SJAG_02592","SJAG_04640","SJAG_03283","SJAG_03696","SJAG_05694","SJAG_02995","SJAG_04342","SJAG_01548","SJAG_03023","SJAG_00507","SJAG_03277","SJAG_02663","SJAG_02573","SJAG_01159","SJAG_16454","SJAG_03276","SJAG_01954","SJAG_05010","SJAG_04672","SJAG_03157","SJAG_03214","SJAG_01222","SJAG_01479","SJAG_02164","SJAG_00544","SJAG_04427","SJAG_02239","SJAG_16457","SJAG_02419","SJAG_04744","SJAG_01317"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70429,72476,73283,74001,75622,77845,83093,83914,84682,84997,85205,85405,85692,85764,85806,85816,85854,86997,87976,88423,88424,89761,89951,89952,90172,91456,92466,93125,94248,95213,100414,100523,100783,100872,100873,101864,102133,105023,105121,106183,108402,108622,108699,112267],"is_not":false,"summary":null,"term":"GO:0010494"}]},"cv_name":"cellular_component","definition":"A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["PMID:20368989","PMID:17284590","GOC:ans","PMID:17601829","PMID:17967451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_01026":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01650":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02663":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03498":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_04342":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic stress granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Stress_granule"],"synonyms":[{"name":"cytoplasmic mRNP granule","type":"exact"},{"name":"stress granule","type":"exact"}],"termid":"GO:0010494","terms_by_termid":{"GO:0010494":null}}


id: GO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any butyrate, the anions of butyric acid (butanoic acid), a saturated, unbranched aliphatic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butyrate metabolic process","secondary_identifiers":["GO:0043437"],"synonyms":[{"name":"butanoic acid metabolic process","type":"exact"},{"name":"butanoic acid metabolism","type":"exact"},{"name":"butyrate metabolism","type":"exact"},{"name":"butyric acid metabolic process","type":"exact"},{"name":"butyric acid metabolism","type":"exact"}],"termid":"GO:0019605"}


id: FYPO:0001357
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114542,114543,114545,114541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[114189,114297,114298,114299],"is_not":false,"summary":null,"term":"FYPO:0001357"},{"annotations":[114452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows normally (i.e. indistinguishably from wild type) in the vegetative growth phase of the life cycle. 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id: PBO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 104 pseudogene","termid":"PBO:0070186"}


id: GO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the lens of an eye.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of eye lens","termid":"GO:0005212"}


id: GO:0052739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylserine + H2O = 2-acyl-sn-glycero-3-phosphoserine + fatty acid.","definition_xrefs":["KEGG_REACTION:R04034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidylserine 1-acylhydrolase activity","secondary_identifiers":["EC:3.1.1.32","Reactome:R-HSA-8869425"],"synonyms":[{"name":"phosphatidylserine-specific phospholipase A1 activity","type":"broad"}],"termid":"GO:0052739"}


id: PR:O94518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dic1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.17c","synonyms":[{"name":"Spom972h-dic1","type":"exact"},{"name":"meiotically up-regulated gene 44 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94518"}


id: GO:0018298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or noncovalent attachment of a chromophore to a protein.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage (obsolete GO:0018298)","termid":"GO:0018298"}


id: FYPO:0007940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type). Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal chromatin organization","termid":"FYPO:0007940"}


id: PBO:0067706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 4","termid":"PBO:0067706"}


id: PBO:0083390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps IES1/YFL013C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083390"}


id: GO:0060316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051281"},{"relation_name":"is_a","term_name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060316"}


id: GO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane-bounded periplasmic space","secondary_identifiers":["Wikipedia:Periplasmic_space"],"synonyms":[{"name":"outer membrane bounded periplasmic space","type":"exact"},{"name":"outer membrane-enclosed periplasmic space","type":"exact"}],"termid":"GO:0030288"}


id: FYPO:0006563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MBF complex assembly is abolished during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished MBF complex assembly during mitotic G1 phase","synonyms":[{"name":"MBF complex assembly abolished during mitotic G1 phase","type":"exact"},{"name":"abolished MBF complex assembly during G1 phase during vegetative growth","type":"exact"},{"name":"abolished MBF complex assembly during G1 phase of mitotic cell cycle","type":"exact"},{"name":"abolished MBF transcription complex assembly during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006563"}


id: PBO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta like 2, pseudogene","termid":"PBO:0043969"}


id: PBO:0086037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in the ER and vacuole lumen; overexpression of YIL089W affects endocytic protein trafficking","termid":"PBO:0086037"}


id: PBO:0089084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein O-mannosyltransferase Ogm4","termid":"PBO:0089084"}


id: GO:0014822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an injury stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of wounding","synonyms":[{"name":"detection of injury","type":"exact"}],"termid":"GO:0014822"}


id: PBO:0040242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 2B","termid":"PBO:0040242"}


id: PR:O74627
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pch1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pch1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.06","synonyms":[{"name":"Spom972h-pch1","type":"exact"},{"name":"pombe cyclin C homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74627"}


id: GO:0047296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 putrescine = NH3 + sym-homospermidine.","definition_xrefs":["MetaCyc:2.5.1.44-RXN","EC:2.5.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"homospermidine synthase activity","secondary_identifiers":["RHEA:18645"],"synonyms":[{"name":"putrescine:putrescine 4-aminobutyltransferase (ammonia-forming)","type":"related"}],"termid":"GO:0047296"}


id: PBO:0059344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 5","termid":"PBO:0059344"}


id: GO:0045548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine = NH4 + trans-cinnamate.","definition_xrefs":["RHEA:21384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phenylalanine ammonia-lyase activity","secondary_identifiers":["EC:4.3.1.25","EC:4.3.1.24"],"synonyms":[{"name":"L-phenylalanine ammonia-lyase activity","type":"related"},{"name":"PAL activity","type":"broad"},{"name":"phe ammonia-lyase activity","type":"related"},{"name":"phenylalanine ammonium-lyase activity","type":"related"},{"name":"phenylalanine deaminase activity","type":"related"}],"termid":"GO:0045548"}


id: PBO:0087332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin for late-Golgi enzymes; required to maintain late-Golgi resident enzymes in their proper location by recycling molecules from the prevacuolar compartment; contains a PX domain and sequence similarity to human Snx3p","termid":"PBO:0087332"}


id: PBO:0039477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 19, pseudogene","termid":"PBO:0039477"}


id: PBO:0061126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family member X1","termid":"PBO:0061126"}


id: PBO:0057036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 129-2","termid":"PBO:0057036"}


id: PBO:0058379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4751","termid":"PBO:0058379"}


id: PBO:0026739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethionine","termid":"PBO:0026739"}


id: PBO:0082708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic26p is a non-essential component of the complex; orthologous to human APOO and APOOL","termid":"PBO:0082708"}


id: PBO:0078072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking kinesin protein 1","termid":"PBO:0078072"}


id: PBO:0064725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 61","termid":"PBO:0064725"}


id: PBO:0076450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tafazzin, phospholipid-lysophospholipid transacylase","termid":"PBO:0076450"}


id: PBO:0064562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 and ZP3 fusion","termid":"PBO:0064562"}


id: GO:0043844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + D-fructose 6-phosphate = AMP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ADP-specific phosphofructokinase activity","secondary_identifiers":["RHEA:20105"],"synonyms":[{"name":"ADP-6-phosphofructokinase activity","type":"related"},{"name":"ADP-Pfk activity","type":"related"},{"name":"ADP-dependent phosphofructokinase activity","type":"related"},{"name":"ADP:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0043844"}


id: PBO:0040620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF-activated non-protein coding RNA","termid":"PBO:0040620"}


id: GO:0071080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the cell surface protein basigin.","definition_xrefs":["PMID:9360995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-basigin complex","synonyms":[{"name":"ITGA3-ITGB1-BSG complex","type":"narrow"}],"termid":"GO:0071080"}


id: GO:0071518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxy-pentane-2,3-dione + ATP = 5-phospho-4-hydroxy-pentane-2,3-dione (P-DPD) + ADP.","definition_xrefs":["PMID:17274596","PMID:20025244","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"autoinducer-2 kinase activity","secondary_identifiers":["MetaCyc:RXN0-5461","RHEA:15377"],"synonyms":[{"name":"4,5-dihydroxy-pentane-2,3-dione kinase activity","type":"exact"}],"termid":"GO:0071518"}


id: PBO:0044815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108D (pseudogene)","termid":"PBO:0044815"}


id: PBO:0054029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1360","termid":"PBO:0054029"}


id: PBO:0051740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 7","termid":"PBO:0051740"}


id: PATO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer touching another entity along a border or with a projecting part.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abut","termid":"PATO:0002435"}


id: PBO:0070772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 2","termid":"PBO:0070772"}


id: FYPO:0000581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of spore germination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased spore germination frequency","synonyms":[{"name":"decreased spore germination","type":"exact"},{"name":"decreased spore viability","type":"related"},{"name":"reduced spore germination frequency","type":"exact"},{"name":"reduced spore viability","type":"related"},{"name":"spore germination: decreased","type":"related"}],"termid":"FYPO:0000581"}


id: PBO:0070901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 9","termid":"PBO:0070901"}


id: GO:0009563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of a synergid cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid differentiation","synonyms":[{"name":"synergid cell differentiation","type":"exact"}],"termid":"GO:0009563"}


id: PBO:0054256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1640","termid":"PBO:0054256"}


id: PBO:0108519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and histone Rpd3L deacetylase complex LCCL domain subunit Rxt3","termid":"PBO:0108519"}


id: PBO:0070775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 5","termid":"PBO:0070775"}


id: GO:0004668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-arginyl-[protein] = L-citrullyl-[protein] + NH4+, resulting in citrullination of the target protein. This reaction is calcium-dependent.","definition_xrefs":["PMID:27393304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"protein-arginine deiminase activity","secondary_identifiers":["EC:3.5.3.15","MetaCyc:PROTEIN-ARGININE-DEIMINASE-RXN","Reactome:R-HSA-1183128","Reactome:R-HSA-3247569","RHEA:18089"],"synonyms":[{"name":"peptidylarginine deiminase activity","type":"related"},{"name":"protein-L-arginine iminohydrolase activity","type":"related"}],"termid":"GO:0004668"}


id: GO:0070423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing (NOD) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["PMID:17944960","PMID:18585455","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-binding oligomerization domain containing signaling pathway (obsolete GO:0070423)","synonyms":[{"name":"NOD signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing signalling pathway","type":"exact"}],"termid":"GO:0070423"}


id: FYPO:0000381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of macroautophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased macroautophagy","synonyms":[{"name":"autophagy: decreased","type":"broad"},{"name":"decreased autophagy","type":"broad"},{"name":"reduced macroautophagy","type":"exact"}],"termid":"FYPO:0000381"}


id: PBO:0002946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Spt20","termid":"PBO:0002946"}


id: PBO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 4","termid":"PBO:0050036"}


id: PATO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer or a population by virtue of some of it's members' inability to survive to reproduce.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-lethal (sensu genetics)","termid":"PATO:0001768"}


id: GO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAP kinase activity","termid":"GO:0043406"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of JUN kinase activity","synonyms":[{"name":"positive regulation of JUNK activity","type":"exact"},{"name":"stimulation of JNK activity","type":"narrow"},{"name":"up regulation of JNK activity","type":"exact"},{"name":"up-regulation of JNK activity","type":"exact"},{"name":"upregulation of JNK activity","type":"exact"}],"termid":"GO:0043507"}


id: PBO:0080519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 5, pseudogene","termid":"PBO:0080519"}


id: GO:0004679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction requires the presence of AMP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0004672","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"AMP-activated protein kinase activity","secondary_identifiers":["Reactome:R-HSA-380927","EC:2.7.11.11","Reactome:R-HSA-163691","Reactome:R-HSA-6805470","Reactome:R-HSA-447074","Reactome:R-HSA-5673768","Reactome:R-HSA-200423","Reactome:R-HSA-1592244"],"synonyms":[{"name":"5'-AMP-activated protein kinase activity","type":"exact"},{"name":"AMPK activity","type":"related"},{"name":"SNF1A/AMP-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004679"}


id: PR:000044739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PMID:28367989","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 phosphorylated 6 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"S7P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:6","type":"exact"}],"termid":"PR:000044739"}


id: PBO:0050597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 2","termid":"PBO:0050597"}


id: PBO:0073315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion regulating guanine nucleotide exchange factor","termid":"PBO:0073315"}


id: PBO:0076940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tissue factor pathway inhibitor","termid":"PBO:0076940"}


id: PBO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YGL056C and YBR214W","termid":"PBO:0003401"}


id: GO:0052619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + L-glutamate + factor gamma-F420-1 = GDP + H+ + factor gamma-F420-2 + phosphate.","definition_xrefs":["MetaCyc:RXN-8081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme F420-0 gamma-glutamyl ligase activity","termid":"GO:0043773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420-1:gamma-L-glutamate ligase activity","secondary_identifiers":["EC:6.3.2.34","RHEA:30523"],"termid":"GO:0052619"}


id: GO:0042777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across the plasma membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.","definition_xrefs":["ISBN:0716731363","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton motive force-driven ATP synthesis","termid":"GO:0015986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"proton motive force-driven plasma membrane ATP synthesis","synonyms":[{"name":"ATP synthesis coupled proton transport","type":"broad"},{"name":"plasma membrane ATP synthesis coupled proton transport","type":"exact"}],"termid":"GO:0042777"}


id: GO:0102240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galactose + soyasapogenol B 3-O-beta-glucuronate = H+ + UDP + soyasaponin III.","definition_xrefs":["EC:2.4.1.272","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"soyasapogenol B glucuronide galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12319","RHEA:31487"],"termid":"GO:0102240"}


id: PBO:0050602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD11B1 antisense RNA 1","termid":"PBO:0050602"}


id: PBO:0067940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 242","termid":"PBO:0067940"}


id: GO:0003178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the valve of the coronary sinus over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary sinus valve development","termid":"GO:0003178"}


id: PBO:0042339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD72 molecule","termid":"PBO:0042339"}


id: GO:0018014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal methionine of proteins to form the derivative N-methyl-L-methionine.","definition_xrefs":["RESID:AA0064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-methionine methylation","termid":"GO:0018014"}


id: GO:0019741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"pentacyclic triterpenoid catabolic process","synonyms":[{"name":"pentacyclic triterpenoid breakdown","type":"exact"},{"name":"pentacyclic triterpenoid catabolism","type":"exact"},{"name":"pentacyclic triterpenoid degradation","type":"exact"}],"termid":"GO:0019741"}


id: PR:Q10356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein DJ-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase DJ-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.03c","secondary_identifiers":["UniProtKB:Q10356"],"synonyms":[{"name":"Spom972h-PARK7","type":"exact"},{"name":"heat shock protein 31 homolog 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein DJ-1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10356"}


id: PBO:0057506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 624","termid":"PBO:0057506"}


id: GO:0061142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesothelial cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesothelial-mesenchymal cell signaling involved in early lung development","synonyms":[{"name":"mesothelial-mesenchymal cell signalling involved in early lung development","type":"exact"}],"termid":"GO:0061142"}


id: GO:0051631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of acetylcholine uptake","synonyms":[{"name":"regulation of acetylcholine import","type":"exact"}],"termid":"GO:0051631"}


id: GO:0097427
data:
  {"annotated_genes":["SJAG_03073","SJAG_02737","SJAG_03540","SJAG_01196","SJAG_02761","SJAG_04841","SJAG_03264","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905720"},{"annotations":[96714,95668,92639,111944,113600,107853,109115,113098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099070"}]},"cv_name":"cellular_component","definition":"An arrangement of closely apposed microtubules running parallel to each other.","definition_xrefs":["NIF_Subcellular:sao1872343973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microtubule bundle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule fascicle","type":"exact"}],"termid":"GO:0097427","terms_by_termid":{"GO:0099070":null,"GO:1905720":null}}


id: PBO:0009818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome protein Pil1","termid":"PBO:0009818"}


id: PBO:0038534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 10, depalmitoylase","termid":"PBO:0038534"}


id: PR:Q9UUC6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein Sm D3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02964","PANTHER:PTHR23338:SF17","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein Sm D3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.14","secondary_identifiers":["UniProtKB:Q9UUC6"],"synonyms":[{"name":"Sm-D3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPD3","type":"exact"},{"name":"snRNP core protein D3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUC6"}


id: PBO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 38","termid":"PBO:0052746"}


id: PBO:0047259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member B","termid":"PBO:0047259"}


id: PBO:0067742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 41","termid":"PBO:0067742"}


id: GO:0002128
data:
  {"annotated_genes":["SJAG_04649","SJAG_02352","SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109879],"is_not":false,"summary":null,"term":"GO:0002128"},{"annotations":[93191,98145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The process that results in the modification of the sugar of a nucleoside in tRNA at the 2'O position.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_02352":null,"SJAG_04649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA nucleoside ribose methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002128","terms_by_termid":{"GO:0002128":null,"GO:0002130":null}}


id: GO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular epithelial cell over time, from its formation to the mature structure. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell development","termid":"GO:0072310"}


id: MOD:01355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a threonine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1O-glycosylated threonine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01355"}


id: GO:0061993
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in).","definition_xrefs":["PMID:19098009","PMID:28645169","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcium:proton antiporter complex","synonyms":[{"name":"CAX1 homodimer","type":"narrow"},{"name":"CAX1-CAX3 complex","type":"narrow"},{"name":"CAX3 homodimer","type":"narrow"}],"termid":"GO:0061993"}


id: PBO:0090328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydrolase-like, human TSTD2 and OVCA2 ortholog, unknown biological role, implicated in co-factor metabolism","termid":"PBO:0090328"}


id: GO:0009440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanate metabolic process","termid":"GO:0009439"},{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"cyanate catabolic process","synonyms":[{"name":"cyanate breakdown","type":"exact"},{"name":"cyanate catabolism","type":"exact"},{"name":"cyanate degradation","type":"exact"}],"termid":"GO:0009440"}


id: PBO:0047102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member A","termid":"PBO:0047102"}


id: PATO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000102 macronutrient sensitivity (obsolete PATO:0000102)","termid":"PATO:0000102"}


id: PBO:0039970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 1","termid":"PBO:0039970"}


id: GO:0046312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphoarginine, a phosphorylated derivative of the amino acid arginine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoarginine metabolic process","termid":"GO:0006604"},{"relation_name":"is_a","term_name":"phosphagen biosynthetic process","termid":"GO:0042396"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phosphoarginine biosynthetic process","synonyms":[{"name":"phosphoarginine anabolism","type":"exact"},{"name":"phosphoarginine biosynthesis","type":"exact"},{"name":"phosphoarginine formation","type":"exact"},{"name":"phosphoarginine synthesis","type":"exact"}],"termid":"GO:0046312"}


id: GO:0020007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A group of cytoskeletal structures and associated membrane-bounded organelles found at the anterior end of adult obligate intracellular protozoan parasites in the phylum Apicomplexa. The apical complex is involved in attachment to and penetration of the host cell, and in parasite proliferation.","definition_xrefs":["PMID:16518471","GOC:giardia","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical complex","termid":"GO:0020007"}


id: MOD:01630
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks either an  L-glutamine residue or an L-glutamic acid residue with an L-lysine residue by an isopeptide bond to form  N6-(L-isoglutamyl)-L-lysine .","definition_xrefs":["ChEBI:21863","PubMed:2461365","PubMed:5656070","DeltaMass:0","PubMed:8598899","RESID:AA0124","PubMed:5637041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoglutamyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"2-azanyl-6-([4-azanyl-4-carboxybutanoyl]azanyl)hexanoic acid","type":"exact"},{"name":"5-glutamyl N6-lysine","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-lysine","type":"exact"},{"name":"N(epsilon)-(gamma-glutamyl)lysine","type":"exact"},{"name":"N6-(L-isoglutamyl)-L-lysine","type":"exact"}],"termid":"MOD:01630"}


id: PR:Q9UUB4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole-succinocarboxamide synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.10","synonyms":[{"name":"SAICAR synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade7","type":"exact"}],"termid":"PR:Q9UUB4"}


id: PBO:0013475
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses chk1delta sensitivity to UV and hydroxyurea","termid":"PBO:0013475"}


id: PBO:0085876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0085876"}


id: PBO:0034569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034569"}


id: PBO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit","termid":"PBO:0001896"}


id: PBO:0089694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent chromatin remodeler/ ubiquitin-protein ligase E3","termid":"PBO:0089694"}


id: PBO:0043616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMMD5 pseudogene 1","termid":"PBO:0043616"}


id: PBO:0064826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 7","termid":"PBO:0064826"}


id: PBO:0064290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like B1","termid":"PBO:0064290"}


id: PBO:0065832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7B, member RAS oncogene family","termid":"PBO:0065832"}


id: SO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The switch region of immunoglobulin heavy chains; it is involved in the rearrangement of heavy chain DNA leading to the expression of a different immunoglobulin classes from the same B-cell.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S_region","synonyms":[{"name":"INSDC_feature:S_region","type":"exact"},{"name":"S region","type":"exact"}],"termid":"SO:0001836"}


id: GO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trichloroethene + chloride + acceptor = tetrachloroethene + reduced acceptor.","definition_xrefs":["EC:1.21.99.5","MetaCyc:1.97.1.8-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tetrachloroethene reductive dehalogenase activity","secondary_identifiers":["RHEA:20353"],"synonyms":[{"name":"acceptor:trichloroethene oxidoreductase (chlorinating)","type":"related"},{"name":"tetrachloroethene reductase activity","type":"related"}],"termid":"GO:0050629"}


id: PBO:0076675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1","termid":"PBO:0076675"}


id: PBO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 90","termid":"PBO:0071088"}


id: GO:0016514
data:
  {"annotated_genes":["SJAG_02589","SJAG_00735","SJAG_01111","SJAG_04005","SJAG_00739","SJAG_05313","SJAG_01016","SJAG_02447","SJAG_02254","SJAG_02869","SJAG_00743","SJAG_03576"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69889,71274,72263,76546,83233,89421,89538,91266,102624,103635,108217,110058],"is_not":false,"summary":null,"term":"GO:0016514"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.","definition_xrefs":["PMID:12672490","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_02254":null,"SJAG_02447":null,"SJAG_02589":null,"SJAG_02869":null,"SJAG_03576":null,"SJAG_04005":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"SWI/SNF complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SWI-SNF complex","type":"exact"}],"termid":"GO:0016514","terms_by_termid":{"GO:0016514":null}}


id: FYPO:0007351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 3.","definition_xrefs":["PMID:31811152","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","synonyms":[{"name":"decreased homologous chromosome pairing at RNA584 locus","type":"narrow"},{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"}],"termid":"FYPO:0007351"}


id: PBO:0030937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mixed_population_including_viable_and_inviable_cells_(obsolete_FYPO:0000908)","termid":"PBO:0030937"}


id: PBO:0063674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 3","termid":"PBO:0063674"}


id: GO:0071539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the centrosome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to centrosome","synonyms":[{"name":"protein localisation to centrosome","type":"exact"}],"termid":"GO:0071539"}


id: PBO:0055760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA activated by TGF-beta","termid":"PBO:0055760"}


id: PBO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L1","termid":"PBO:0042213"}


id: PBO:0088619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk31","termid":"PBO:0088619"}


id: GO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"modulation by symbiont of host ethylene-mediated defense response","termid":"GO:0052084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host ethylene-mediated defense response","secondary_identifiers":["GO:0052070","GO:0052254","GO:0052268"],"synonyms":[{"name":"down regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"down-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"downregulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"inhibition by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"negative regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"negative regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by organism of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052005"}


id: PBO:0064538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin B (pseudogene)","termid":"PBO:0064538"}


id: PBO:0040333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 8","termid":"PBO:0040333"}


id: PBO:0047012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A15, pseudogene","termid":"PBO:0047012"}


id: PBO:0050316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 18","termid":"PBO:0050316"}


id: PBO:0027487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_G0","termid":"PBO:0027487"}


id: GO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + 2 oxidized ferredoxin = L-glutamine + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + 2 oxidized ferredoxin + H2O = NH3 + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+.","definition_xrefs":["EC:1.4.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","termid":"GO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glutamate synthase (ferredoxin) activity","secondary_identifiers":["RHEA:12128","MetaCyc:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN","MetaCyc:PWY-4341"],"synonyms":[{"name":"L-glutamate:ferredoxin oxidoreductase (transaminating)","type":"related"},{"name":"ferredoxin-dependent glutamate synthase activity","type":"related"},{"name":"ferredoxin-glutamate synthase activity","type":"related"},{"name":"glutamate synthase (ferredoxin-dependent)","type":"related"}],"termid":"GO:0016041"}


id: PBO:0055770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long non-coding regulator of POU2F2","termid":"PBO:0055770"}


id: PBO:0083857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1F0 ATPase synthase peripheral stalk assembly factor; subunit of the matrix-exposed inner mitochondrial membrane localized INA complex (Ina22p-Ina17p) involved in assembly of the F1F0 peripheral stalk; co-purifies with Ina22p and ATP synthase subunits; null mutant displays elevated frequency of mitochondrial genome loss and has a respiratory growth defect","termid":"PBO:0083857"}


id: GO:1905437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K4 trimethylation.","definition_xrefs":["PMID:27541139","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 trimethylation (obsolete GO:1905437)","synonyms":[{"name":"activation of histone H3-K4 trimethylation","type":"narrow"},{"name":"up regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"up-regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"upregulation of histone H3-K4 trimethylation","type":"exact"}],"termid":"GO:1905437"}


id: PBO:0089691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2","termid":"PBO:0089691"}


id: PBO:0045917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 12","termid":"PBO:0045917"}


id: SO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_translocation","synonyms":[{"name":"regulatory region translocation","type":"exact"}],"termid":"SO:0001884"}


id: PBO:0029981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029981"}


id: GO:0043394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteoglycan, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proteoglycan binding","termid":"GO:0043394"}


id: PBO:0067157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 209, pseudogene","termid":"PBO:0067157"}


id: PR:000050399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, MOD:00047.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:23333317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/Phos:(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom-cut12/Phos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, MOD:00047","type":"narrow"},{"name":"cut12/Phos:(T75,T78)","type":"exact"}],"termid":"PR:000050399"}


id: PBO:0034751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading/unloading factor (WAPL) Wpl1","termid":"PBO:0034751"}


id: FYPO:0005433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination at one or more recombination hotspots is decreased to the background level. The basal rate of recombination (i.e. away from hotspots) may remain normal or may be decreased.","definition_xrefs":["PomBase:mah","PMID:12019258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased meiotic recombination at hotspot","synonyms":[{"name":"decreased meiotic recombination at recombination hotspot","type":"exact"},{"name":"hotspot-specific decreased meiotic recombination","type":"exact"},{"name":"reduced meiotic recombination at hotspot","type":"exact"}],"termid":"FYPO:0005433"}


id: PBO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 11","termid":"PBO:0070305"}


id: GO:0061073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ciliary body generated and organized. The ciliary body is the circumferential tissue inside the eye composed of the ciliary muscle and ciliary processes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ciliary body morphogenesis","termid":"GO:0061073"}


id: PBO:0084301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Involved in SRP-independent protein targeting to the ER; component of an alternative ER-targeting pathway partially redundant with the GET pathway that can compensate for SRP loss; preference for substrates with downstream transmembrane domains; interacts with Snd1p, Env10p/Snd2p, and Sec61p-translocon subunits; role in establishing nucleus-vacuole junctions (NVJs) in high glucose; targeted to the NVJ during glucose starvation to facilitate expansion; role in phosphate transport with Pho86p","termid":"PBO:0084301"}


id: GO:0098832
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A recycling endosome that is organized around the microtubule organizing center, close to the nucleus. This is the main recycling endosome of most cells. It receives input from the Golgi as well as recycled molecules from early endosomes.","definition_xrefs":["PMID:19696797","PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"peri-centrosomal recycling endosome","termid":"GO:0098832"}


id: PBO:0091181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 1","termid":"PBO:0091181"}


id: PBO:0056724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylphosphate capping enzyme","termid":"PBO:0056724"}


id: PBO:0068502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 89, pseudogene","termid":"PBO:0068502"}


id: PBO:0042461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 3","termid":"PBO:0042461"}


id: PBO:0078524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 15","termid":"PBO:0078524"}


id: PBO:0029355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_centromere","termid":"PBO:0029355"}


id: PBO:0053770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1015","termid":"PBO:0053770"}


id: PBO:0090290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rei1","termid":"PBO:0090290"}


id: PBO:0085100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein; possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern; relative distribution to the nucleus decreases upon DNA replication stress","termid":"PBO:0085100"}


id: GO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a fungus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of fungus","secondary_identifiers":["GO:0009599","GO:0016047"],"synonyms":[{"name":"detection of fungi","type":"exact"},{"name":"detection of parasitic fungi","type":"narrow"},{"name":"detection of parasitic fungus","type":"narrow"},{"name":"perception of fungi","type":"related"},{"name":"perception of fungus","type":"related"},{"name":"perception of parasitic fungi","type":"narrow"},{"name":"perception of parasitic fungus","type":"related"}],"termid":"GO:0016046"}


id: GO:0000439
data:
  {"annotated_genes":["SJAG_00901","SJAG_00512","SJAG_00995","SJAG_03206","SJAG_01207","SJAG_00758","SJAG_04368"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70010,75156,77252,85755,87603,104142,110183],"is_not":false,"summary":null,"term":"GO:0000439"}]},"cv_name":"cellular_component","definition":"The 7 subunit core of TFIIH that is a part of either the general transcription factor holo-TFIIH or the nucleotide-excision repair factor 3 complex. In S. cerevisiae/humans the complex is composed of: Ssl2/XPB, Tfb1/p62, Tfb2/p52, Ssl1/p44, Tfb4/p34, Tfb5/p8 and Rad3/XPD.","definition_xrefs":["PMID:14500720","GOC:krc","PMID:22308316","PMID:22572993","PMID:23028141","PMID:7813015","GOC:ew","PMID:17215295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null,"SJAG_04368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFIIH core complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000441"],"synonyms":[{"name":"SSL2-core TFIIH complex","type":"exact"},{"name":"core TFIIH complex","type":"exact"}],"termid":"GO:0000439","terms_by_termid":{"GO:0000439":null}}


id: GO:1900838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ergot alkaloid biosynthetic process","termid":"GO:1900823"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"negatively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"inhibition of fumigaclavine C biosynthetic process","type":"narrow"}],"termid":"GO:1900838"}


id: GO:0005334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: norepinephrine(out) + Na+(out) + Cl-(out) = norepinephrine(in) + Na+(in) + Cl-(in).","definition_xrefs":["PMID:22519513","TC:2.A.22.1.2","PMID:21752877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"norepinephrine:sodium symporter activity","secondary_identifiers":["Wikipedia:Norepinephrine_transporter","GO:0005333","Reactome:R-HSA-5659764","Reactome:R-HSA-443997"],"synonyms":[{"name":"levarterenol transporter activity","type":"exact"},{"name":"noradrenaline transporter activity","type":"exact"},{"name":"norepinephrine transmembrane transporter activity","type":"exact"},{"name":"norepinephrine:sodium:chloride symporter activity","type":"exact"},{"name":"sodium/norepinephrine symporter activity","type":"exact"}],"termid":"GO:0005334"}


id: GO:0015224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of biopterin from one side of a membrane to the other. Biopterin is a growth factor for certain protozoans and some insects; it is widely distributed in tissues and functions in a reduced form, tetrahydrobiopterin, as a hydroxylation coenzyme.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"biopterin transmembrane transporter activity","synonyms":[{"name":"biopterin transporter activity","type":"related"}],"termid":"GO:0015224"}


id: GO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin metabolic process","synonyms":[{"name":"regulation of anthocyanin metabolism","type":"exact"}],"termid":"GO:0031537"}


id: PBO:0087746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein to nucleus via interaction with the TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair","termid":"PBO:0087746"}


id: PBO:0065812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3 GTPase activating non-catalytic protein subunit 2","termid":"PBO:0065812"}


id: GO:0048514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel morphogenesis","termid":"GO:0048514"}


id: PBO:0045139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 8","termid":"PBO:0045139"}


id: PBO:0047126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 169 member A","termid":"PBO:0047126"}


id: GO:0045091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single stranded viral RNA replication via double stranded DNA intermediate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral genome replication","termid":"GO:0045069"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"regulates","term_name":"single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0039692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single stranded viral RNA replication via double stranded DNA intermediate","synonyms":[{"name":"regulation of retroviral genome replication","type":"exact"}],"termid":"GO:0045091"}


id: GO:0048133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell in the male gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the male gametes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell asymmetric division","termid":"GO:0098728"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line stem cell asymmetric division","synonyms":[{"name":"male germ-line stem cell renewal","type":"exact"}],"termid":"GO:0048133"}


id: PBO:0035888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Mei2_nuclear_dot_present_in_cell_during_vegetative_growth","termid":"PBO:0035888"}


id: PBO:0089325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp3","termid":"PBO:0089325"}


id: GO:0050014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-erythrulose 1-phosphate = formaldehyde + glycerone phosphate.","definition_xrefs":["RHEA:20932","EC:4.1.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ketotetrose-phosphate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01014","MetaCyc:KETOTETROSE-PHOSPHATE-ALDOLASE-RXN"],"synonyms":[{"name":"erythrose-1-phosphate synthase activity","type":"related"},{"name":"erythrulose-1-phosphate formaldehyde-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"erythrulose-1-phosphate formaldehyde-lyase activity","type":"related"},{"name":"erythrulose-1-phosphate synthetase activity","type":"related"},{"name":"phosphoketotetrose aldolase activity","type":"related"}],"termid":"GO:0050014"}


id: GO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of both isopentenyl pyrophosphate and dimethylallyl pyrophosphate from (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate.","definition_xrefs":["PMID:11818558","GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylbutenyl pyrophosphate reductase activity","synonyms":[{"name":"(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)","type":"exact"}],"termid":"GO:0042380"}


id: PBO:0087052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24B; not essential for translation but may be required for normal translation rate; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24B has a paralog, RPL24A, that arose from the whole genome duplication","termid":"PBO:0087052"}


id: GO:0043305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"negatively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell degranulation","synonyms":[{"name":"down regulation of mast cell degranulation","type":"exact"},{"name":"down-regulation of mast cell degranulation","type":"exact"},{"name":"downregulation of mast cell degranulation","type":"exact"},{"name":"inhibition of mast cell degranulation","type":"narrow"},{"name":"negative regulation of mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043305"}


id: PBO:0065803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1B, member RAS oncogene family","termid":"PBO:0065803"}


id: GO:1900095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:20622855","Wikipedia:XY_sex-determination_system"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dosage compensation by inactivation of X chromosome (obsolete GO:1900095)","synonyms":[{"name":"regulation of Barr body formation","type":"related"},{"name":"regulation of X chromosome inactivation","type":"exact"},{"name":"regulation of chromosome inactivation","type":"broad"}],"termid":"GO:1900095"}


id: PBO:0071305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 28","termid":"PBO:0071305"}


id: FYPO:0003054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region such as the omt3 locus on chromosome 1 or the sme2 locus on chromosome 2.","definition_xrefs":["PMID:23117617","PMID:22582262","PomBase:mah","PMID:24173580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing","termid":"FYPO:0003025"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003054"}


id: PBO:0026934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_horsetail_movement","termid":"PBO:0026934"}


id: GO:0075257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or overwintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of teliospore formation","termid":"GO:0075256"},{"relation_name":"positively_regulates","term_name":"teliospore formation","termid":"GO:0075255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of teliospore formation","termid":"GO:0075257"}


id: PBO:0064603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 1","termid":"PBO:0064603"}


id: PBO:0017995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 Atg8 and Atg12 E1 activating enzyme Atg7 (predicted)","termid":"PBO:0017995"}


id: PBO:0051469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-63 (pseudogene)","termid":"PBO:0051469"}


id: SO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA cytosine base feature, modified by a hydroxymethyl group at the 5 carbon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_hydroxymethylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"5-hmC","type":"exact"},{"name":"5-hydroxymethylcytosine","type":"exact"}],"termid":"SO:0001960"}


id: PBO:0059175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRAP antisense RNA 1","termid":"PBO:0059175"}


id: GO:1901639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of XDP.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete XDP catabolic process (obsolete GO:1901639)","synonyms":[{"name":"XDP breakdown","type":"exact"},{"name":"XDP catabolism","type":"exact"},{"name":"XDP degradation","type":"exact"}],"termid":"GO:1901639"}


id: PBO:0047620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculogenesis specific bHLH transcription factor","termid":"PBO:0047620"}


id: PBO:0086206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with ribosomes; homolog of translationally controlled tumor protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and relocates to the mitochondrial outer surface upon oxidative stress; homolog of human TPT1","termid":"PBO:0086206"}


id: SO:1000087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variation that causes an increase in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000087 sequence_variation_increasing_level_of_transcript (obsolete SO:1000087)","synonyms":[{"name":"mutation increasing level of transcript","type":"exact"},{"name":"sequence variation increasing level of transcript","type":"exact"}],"termid":"SO:1000087"}


id: GO:0097222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic addition of a sequence of 40-60 adenylyl residues at the 3' end of a eukaryotic mitochondrial mRNA primary transcript. Mitochondria contain both stabilizing and destabilizing poly(A) tails.","definition_xrefs":["GOC:ans","PMID:18083837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA polyadenylation","termid":"GO:0097222"}


id: GO:0018588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tri-n-butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyldibutyltin.","definition_xrefs":["UM-BBD_reactionID:r0643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tri-n-butyltin dioxygenase activity","synonyms":[{"name":"TBT dioxygenase activity","type":"exact"}],"termid":"GO:0018588"}


id: GO:0099112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a protein driven by polymerization of a microtubule to which it is attached.","definition_xrefs":["GOC:vw","GOC:dos","PMID:11018050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"microtubule-based protein transport","termid":"GO:0099118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"microtubule polymerization based protein transport","termid":"GO:0099112"}


id: FYPO:0001774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to eisosome filament","synonyms":[{"name":"abnormal protein localisation to eisosome filament","type":"exact"},{"name":"abnormal protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"abnormal protein localization to linear eisosome","type":"exact"}],"termid":"FYPO:0001774"}


id: PBO:0083739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments","termid":"PBO:0083739"}


id: PATO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given area.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Area_density"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"area density","termid":"PATO:0001351"}


id: GO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hypochlorous acid.","definition_xrefs":["GOC:add","PMID:176150","PMID:10085024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"},{"relation_name":"is_a","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hypochlorous acid metabolic process","synonyms":[{"name":"HClO metabolic process","type":"exact"},{"name":"HOCl metabolic process","type":"exact"},{"name":"hypochlorite metabolic process","type":"related"},{"name":"hypochlorous acid metabolism","type":"exact"}],"termid":"GO:0002148"}


id: PBO:0067424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 543, pseudogene","termid":"PBO:0067424"}


id: GO:0008064
data:
  {"annotated_genes":["SJAG_02700","SJAG_00521","SJAG_01993","SJAG_01894","SJAG_03086","SJAG_04982","SJAG_04100","SJAG_00279","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74860,87760,77670,78521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[76041,77904,86166,100378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[74865,71894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament length","termid":"GO:0030832"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of actin polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008064","terms_by_termid":{"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: FYPO:0000894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which intracellular mitochondrion distribution, the process that results in the spatial arrangement of mitochondria in a cell, is abnormal.","definition_xrefs":["PomBase:mah","GO:0048312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial distribution","termid":"FYPO:0000489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal intracellular mitochondrion distribution","synonyms":[{"name":"abnormal intracellular mitochondrion distribution during mitotic cell cycle","type":"related"},{"name":"abnormal intracellular mitochondrion distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0000894"}


id: PBO:0076060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stonin 2","termid":"PBO:0076060"}


id: PBO:0085933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; partially overlaps the uncharacterized ORF YGR017W","termid":"PBO:0085933"}


id: GO:0017025
data:
  {"annotated_genes":["SJAG_00692","SJAG_03900","SJAG_01523","SJAG_03120","SJAG_02174","SJAG_00650","SJAG_02458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57966,66429,70571,71531,74898,75681,76021],"is_not":false,"summary":null,"term":"GO:0017025"}]},"cv_name":"molecular_function","definition":"Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs).","definition_xrefs":["PMID:16858867","GOC:txnOH","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"TBP-class protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TATA-binding protein binding","type":"narrow"},{"name":"TBP binding","type":"narrow"},{"name":"TBP-related factor (TRF) protein binding","type":"narrow"}],"termid":"GO:0017025","terms_by_termid":{"GO:0017025":null}}


id: PBO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX17 pseudogene 1","termid":"PBO:0043768"}


id: PBO:0049259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goosecoid homeobox","termid":"PBO:0049259"}


id: PBO:0060211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multivesicular body subunit 12A","termid":"PBO:0060211"}


id: GO:1901519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone B.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone B metabolic process","synonyms":[{"name":"aspyridone B metabolism","type":"exact"}],"termid":"GO:1901519"}


id: GO:0000808
data:
  {"annotated_genes":["SJAG_03927","SJAG_02800","SJAG_01267","SJAG_03451","SJAG_05301","SJAG_02394"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103017,69971,77340,74112,92677,103228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005664"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that is located at the replication origins of a chromosome.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01267":null,"SJAG_02394":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"origin recognition complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Origin_recognition_complex"],"synonyms":[{"name":"ORC","type":"exact"},{"name":"origin of replication recognition complex","type":"exact"}],"termid":"GO:0000808","terms_by_termid":{"GO:0005664":null}}


id: PBO:0041428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 74","termid":"PBO:0041428"}


id: GO:0019872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of streptomycin, a commonly used antibiotic in cell culture media; it acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"streptomycin metabolic process","termid":"GO:0046343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"streptomycin biosynthetic process","synonyms":[{"name":"streptomycin anabolism","type":"exact"},{"name":"streptomycin biosynthesis","type":"exact"},{"name":"streptomycin formation","type":"exact"},{"name":"streptomycin synthesis","type":"exact"}],"termid":"GO:0019872"}


id: GO:0030663
data:
  {"annotated_genes":["SJAG_04002","SJAG_04474","SJAG_02482","SJAG_04070","SJAG_04569","SJAG_01508","SJAG_00192","SJAG_04391","SJAG_02234"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70815,88635,93783,76661,72918,76967,111402,102310,78274],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a COPI-coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi-associated vesicle membrane","termid":"GO:0030660"},{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_01508":null,"SJAG_02234":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04569":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"COPI-coated vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPI coated vesicle membrane","type":"exact"}],"termid":"GO:0030663","terms_by_termid":{"GO:0030126":null}}


id: GO:0009400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.","definition_xrefs":["GOC:bf","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with serine/threonine phosphatase activity (obsolete GO:0009400)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0009400"}


id: PBO:0070000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1296, pseudogene","termid":"PBO:0070000"}


id: PBO:0039158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 5","termid":"PBO:0039158"}


id: GO:2000923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"positive regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000923"}


id: PBO:0027421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027421"}


id: PBO:0073255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7","termid":"PBO:0073255"}


id: GO:0006460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-prolyl isomerase B reaction (obsolete GO:0006460)","synonyms":[{"name":"peptidyl-prolyl isomerase B reaction","type":"exact"}],"termid":"GO:0006460"}


id: PBO:0040695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain keto acid dehydrogenase E1 subunit alpha","termid":"PBO:0040695"}


id: GO:1903142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of endothelial barrier.","definition_xrefs":["GOC:TermGenie","PMID:24851274","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell development","termid":"GO:1901552"},{"relation_name":"is_a","term_name":"regulation of establishment of endothelial barrier","termid":"GO:1903140"},{"relation_name":"positively_regulates","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of endothelial barrier","synonyms":[{"name":"activation of establishment of endothelial barrier","type":"narrow"},{"name":"up regulation of establishment of endothelial barrier","type":"exact"},{"name":"up-regulation of establishment of endothelial barrier","type":"exact"},{"name":"upregulation of establishment of endothelial barrier","type":"exact"}],"termid":"GO:1903142"}


id: RO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x partially overlaps y iff there exists some z such that z is part of x and z is part of y, and it is also the case that neither x is part of y or y is part of x","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_overlaps","termid":"RO:0002151"}


id: GO:0034279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate = 9-beta-pimara-7,15-diene + diphosphate.","definition_xrefs":["RHEA:25560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"syn-pimara-7,15-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-4883","EC:4.2.3.35","KEGG_REACTION:R09117"],"synonyms":[{"name":"9alpha-copalyl-diphosphate diphosphate-lyase (9beta-pimara-7,15-diene-forming) activity","type":"exact"}],"termid":"GO:0034279"}


id: FYPO:0001420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow at the same rate as wild type in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"},{"relation_name":"is_a","term_name":"normal cell population growth rate","termid":"FYPO:0001419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal vegetative cell population growth rate","synonyms":[{"name":"normal growth rate","type":"broad"},{"name":"normal vegetative cell population proliferation","type":"related"},{"name":"normal vegetative cell proliferation","type":"related"}],"termid":"FYPO:0001420"}


id: GO:0061036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cartilage development","termid":"GO:0061035"},{"relation_name":"positively_regulates","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cartilage development","termid":"GO:0061036"}


id: GO:0044258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown into fatty acids and monoglycerides of lipids in the small intestine. Lipids are broken down by lipases released by the pancreas.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"intestinal lipid catabolic process","synonyms":[{"name":"intestinal lipid breakdown","type":"exact"},{"name":"intestinal lipid catabolism","type":"exact"},{"name":"intestinal lipid degradation","type":"exact"}],"termid":"GO:0044258"}


id: PBO:0075605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3","termid":"PBO:0075605"}


id: GO:1903057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanosome organization.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:24769727","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of melanosome organization","termid":"GO:1903056"},{"relation_name":"negatively_regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of melanosome organization","synonyms":[{"name":"down regulation of melanosome organisation","type":"exact"},{"name":"down regulation of melanosome organization","type":"exact"},{"name":"down regulation of melanosome organization and biogenesis","type":"related"},{"name":"down-regulation of melanosome organisation","type":"exact"},{"name":"down-regulation of melanosome organization","type":"exact"},{"name":"down-regulation of melanosome organization and biogenesis","type":"related"},{"name":"downregulation of melanosome organisation","type":"exact"},{"name":"downregulation of melanosome organization","type":"exact"},{"name":"downregulation of melanosome organization and biogenesis","type":"related"},{"name":"inhibition of melanosome organisation","type":"narrow"},{"name":"inhibition of melanosome organization","type":"narrow"},{"name":"inhibition of melanosome organization and biogenesis","type":"related"},{"name":"negative regulation of melanosome organisation","type":"exact"},{"name":"negative regulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903057"}


id: FYPO:0007072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is shorter than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["PomBase:mah","GO:0000092","PMID:31427431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic anaphase B","synonyms":[{"name":"decreased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic anaphase B progression","type":"exact"},{"name":"reduced duration of mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007072"}


id: PBO:0055672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase B, lysosomal acid type","termid":"PBO:0055672"}


id: PBO:0053175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope like proline rich 1","termid":"PBO:0053175"}


id: PR:O14076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpp6 gene.","definition_xrefs":["UniProtKB:O14076","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.11c","synonyms":[{"name":"Spom972h-mpp6","type":"exact"}],"termid":"PR:O14076"}


id: PBO:0085431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; catalyzes uptake of polyamines at alkaline pH and excretion at acidic pH; during oxidative stress exports spermine, spermidine from the cell, which controls timing of expression of stress-responsive genes; phosphorylation enhances activity and sorting to the plasma membrane","termid":"PBO:0085431"}


id: PBO:0059366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 1","termid":"PBO:0059366"}


id: PBO:0075346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOS1 intronic transcript 1","termid":"PBO:0075346"}


id: PBO:0063386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 5","termid":"PBO:0063386"}


id: GO:0018248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via transient sulfation of peptidyl-cysteine to form S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via peptidyl cysteine sulfation (obsolete GO:0018248)","synonyms":[{"name":"enzyme active site formation via S-sulpho-L-cysteine","type":"exact"}],"termid":"GO:0018248"}


id: GO:0019771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgG receptor activity","termid":"GO:0019770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgG receptor activity","synonyms":[{"name":"high affinity Fc receptor activity","type":"related"},{"name":"high affinity IgG receptor activity","type":"exact"}],"termid":"GO:0019771"}


id: GO:0140707
data:
  {"annotated_genes":["SJAG_03449","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86811,114207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"}]},"cv_name":"molecular_function","definition":"Binding to chromatin and the nuclear inner membrane, in order to establish and maintain the heterochromatin location and organization, or to enable equal segregation of the nuclear membrane during mitosis.","definition_xrefs":["PMID:31048766","PMID:24184107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"chromatin-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0140707","terms_by_termid":{"GO:0062239":null}}


id: GO:0044458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a motile cilium.","definition_xrefs":["ZFIN:dsf","GOC:krc","GO_REF:0000079","GOC:cilia","PMID:21129373","PMID:19776033","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"motile cilium assembly","secondary_identifiers":["GO:1903887"],"synonyms":[{"name":"motile primary cilia assembly","type":"related"},{"name":"motile primary cilia formation","type":"related"},{"name":"motile primary cilium assembly","type":"related"},{"name":"motile primary cilium formation","type":"related"},{"name":"nodal cilium assembly","type":"related"},{"name":"nodal cilium formation","type":"related"}],"termid":"GO:0044458"}


id: GO:0032450
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96884,96885],"is_not":false,"summary":null,"term":"GO:0032450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-maltose + H2O = 2 alpha-D-glucose.","definition_xrefs":["MetaCyc:RXN-2141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,4-glucosidase activity","termid":"GO:0004558"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"maltose alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-15910","EC:3.2.1.20"],"synonyms":[{"name":"maltase activity","type":"exact"}],"termid":"GO:0032450","terms_by_termid":{"GO:0032450":null}}


id: PBO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc14 (predicted)","termid":"PBO:0002842"}


id: PBO:0073992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 2","termid":"PBO:0073992"}


id: GO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triglyceride stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to triglyceride","termid":"GO:0034014"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triglyceride","synonyms":[{"name":"cellular response to triacylglyceride","type":"exact"},{"name":"cellular response to triacylglycerol","type":"exact"}],"termid":"GO:0071401"}


id: GO:0042116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149","PMID:14506301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage activation","synonyms":[{"name":"macrophage polarization","type":"exact"}],"termid":"GO:0042116"}


id: PBO:0062090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 40 pseudogene","termid":"PBO:0062090"}


id: PBO:0058117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4420","termid":"PBO:0058117"}


id: PATO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having one nucleus.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleated","termid":"PATO:0002505"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mononucleate","termid":"PATO:0001407"}


id: GO:0048942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a glial cell in the posterior lateral line nerve are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in the posterior lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"},{"relation_name":"part_of","term_name":"posterior lateral line nerve glial cell development","termid":"GO:0048941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048942"}


id: GO:0035210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the prepupa over time, from its formation to the mature structure. The prepupal stage is a life stage interposed between the larval and the pupal stages in insects that undergo a complete metamorphosis. The start of the pre-pupal stage is marked by pupariation, and the end is marked by pupation.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prepupal development","termid":"GO:0035210"}


id: GO:0035948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17875938","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035948)","synonyms":[{"name":"regulation of gluconeogenesis by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of glucose biosynthetic process by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035948"}


id: GO:0043065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"positively_regulates","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process","synonyms":[{"name":"pro-apoptosis","type":"related"},{"name":"stimulation of apoptosis","type":"narrow"},{"name":"up regulation of apoptosis","type":"exact"},{"name":"up-regulation of apoptosis","type":"exact"},{"name":"upregulation of apoptosis","type":"exact"},{"name":"activation of apoptosis","type":"narrow"},{"name":"positive regulation of apoptosis","type":"narrow"}],"termid":"GO:0043065"}


id: PBO:0027797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tetraplatin","termid":"PBO:0027797"}


id: PBO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein","termid":"PBO:0001527"}


id: FYPO:0007601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased, and the protein is instead visible diffusely localized in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:33138913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitochondrion","termid":"FYPO:0007038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization","synonyms":[{"name":"decreased protein localisation to mitochondrion, with diffuse cytoplasmic protein mislocalisation","type":"exact"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic localization","type":"exact"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization","type":"exact"}],"termid":"FYPO:0007601"}


id: GO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 21U-RNAs, a class of single-stranded RNA molecules of about 21 nucleotides in length characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA metabolic process","termid":"GO:0034660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"21U-RNA metabolic process","synonyms":[{"name":"21U-RNA metabolism","type":"exact"}],"termid":"GO:0034585"}


id: GO:1901981
data:
  {"annotated_genes":["SJAG_04077","SJAG_00173","SJAG_04219","SJAG_00314","SJAG_01748","SJAG_00638","SJAG_03250","SJAG_00971","SJAG_01143","SJAG_01135","SJAG_00115","SJAG_02468","SJAG_02587","SJAG_01519","SJAG_04963","SJAG_02248","SJAG_01382","SJAG_00152","SJAG_03851","SJAG_04024","SJAG_01945","SJAG_00724","SJAG_02572","SJAG_02392","SJAG_05179","SJAG_01769","SJAG_00118","SJAG_00368","SJAG_04644","SJAG_01516","SJAG_01783","SJAG_00216","SJAG_02177","SJAG_02657","SJAG_04960","SJAG_02166","SJAG_04010","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91236],"is_not":false,"summary":null,"term":"GO:1901981"},{"annotations":[112450,97687,83627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[78344,72879,71551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[70401,86073,94995,91310,104939,86957,110268,107555,72876,95132,104792,71549,78341,105133,72586,95131,100058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[94609,83559,113449,113907,73050,112041,97043,97191,101799,109940,85127,94641,86235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[94610,95409,107595,97688,89908,76373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol phosphate.","definition_xrefs":["PMID:23445487","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00216":null,"SJAG_00314":null,"SJAG_00368":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00724":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02248":null,"SJAG_02392":null,"SJAG_02468":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02657":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04219":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol phosphate binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1901981","terms_by_termid":{"GO:0005546":null,"GO:0005547":null,"GO:0032266":null,"GO:0070273":null,"GO:0080025":null,"GO:1901981":null}}


id: GO:0061549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"},{"relation_name":"part_of","term_name":"sympathetic nervous system development","termid":"GO:0048485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic ganglion development","synonyms":[{"name":"sympathetic ganglia development","type":"related"}],"termid":"GO:0061549"}


id: PBO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.13.-","termid":"PBO:0004706"}


id: GO:0033987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,7,4'-trihydroxyisoflavanone = daidzein + H2O.","definition_xrefs":["EC:4.2.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-hydroxyisoflavanone dehydratase activity","secondary_identifiers":["MetaCyc:RXN-3284","RHEA:16445"],"synonyms":[{"name":"2,7,4'-trihydroxyisoflavanone hydro-lyase (daidzein-forming) activity","type":"related"},{"name":"2,7,4'-trihydroxyisoflavanone hydro-lyase activity","type":"related"}],"termid":"GO:0033987"}


id: GO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vasoconstriction that is triggered by vasomotor excitation resulting from the detection of high carbon dioxide levels in the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure","termid":"GO:0002014"}


id: PR:O74798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related trafficking adapter C2D10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.04","synonyms":[{"name":"Spom972h-SPBC2D10.04","type":"exact"}],"termid":"PR:O74798"}


id: GO:0032724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"positively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of fractalkine production","synonyms":[{"name":"activation of fractalkine production","type":"narrow"},{"name":"stimulation of fractalkine production","type":"narrow"},{"name":"up regulation of fractalkine production","type":"exact"},{"name":"up-regulation of fractalkine production","type":"exact"},{"name":"upregulation of fractalkine production","type":"exact"}],"termid":"GO:0032724"}


id: PBO:0068439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 11, pseudogene","termid":"PBO:0068439"}


id: PBO:0004542
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sep2","termid":"PBO:0004542"}


id: PBO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki2","termid":"PBO:0003410"}


id: PBO:0058300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4674","termid":"PBO:0058300"}


id: GO:0052464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of programmed cell death in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont programmed cell death (obsolete GO:0052464)","synonyms":[{"name":"modulation by organism of symbiont programmed cell death","type":"exact"},{"name":"modulation of symbiont HR","type":"broad"},{"name":"modulation of symbiont PCD","type":"exact"},{"name":"modulation of symbiont hypersensitive response","type":"narrow"}],"termid":"GO:0052464"}


id: PBO:0083459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene IFH1","termid":"PBO:0083459"}


id: PATO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being convex on both sides or surface.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/biconvexity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex","termid":"PATO:0001355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biconvex","secondary_identifiers":["Image:http\\://www.thefreedictionary.com/_/viewer.aspx?path=hm&name=A4bicovx"],"termid":"PATO:0002040"}


id: GO:0000254
data:
  {"annotated_genes":["SJAG_03018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69970],"is_not":false,"summary":null,"term":"GO:0000254"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,4-dimethyl-5alpha-cholest-7-en-3beta-ol + 6 Fe(II)-[cytochrome b5] + 5 H(+) + 3 O2 = 4alpha-carboxy-4beta-methyl-5alpha-cholest-7-ene-3beta-ol + 6 Fe(III)-[cytochrome b5] + 4 H2O.","definition_xrefs":["PMID:9811880","RHEA:55220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"C-4 methylsterol oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-194669","Reactome:R-HSA-194641","MetaCyc:RXN-13188","EC:1.14.18.9"],"synonyms":[{"name":"4-methylsterol oxidase activity","type":"exact"},{"name":"methylsterol hydroxylase activity","type":"related"},{"name":"methylsterol monooxygenase activity","type":"related"}],"termid":"GO:0000254","terms_by_termid":{"GO:0000254":null}}


id: GO:1901508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"positively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of acylglycerol transport","synonyms":[{"name":"activation of acylglycerol transport","type":"narrow"},{"name":"activation of glyceride transport","type":"narrow"},{"name":"positive regulation of glyceride transport","type":"exact"},{"name":"up regulation of acylglycerol transport","type":"exact"},{"name":"up regulation of glyceride transport","type":"exact"},{"name":"up-regulation of acylglycerol transport","type":"exact"},{"name":"up-regulation of glyceride transport","type":"exact"},{"name":"upregulation of acylglycerol transport","type":"exact"},{"name":"upregulation of glyceride transport","type":"exact"}],"termid":"GO:1901508"}


id: PBO:0090849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA N6-threonyl-carbamoyl-adenosine (t6A) Sua5","termid":"PBO:0090849"}


id: GO:0044623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell migration in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"modulation of cell migration in another organism","termid":"GO:0044621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration in another organism","secondary_identifiers":["GO:0044626"],"synonyms":[{"name":"envenomation resulting in positive regulation of cell migration in another organism","type":"narrow"},{"name":"envenomation resulting in positive regulation of cell migration in other organism","type":"narrow"},{"name":"positive regulation of cell migration in other organism","type":"exact"}],"termid":"GO:0044623"}


id: GO:0050668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur amino acid metabolic process","termid":"GO:0031337"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"regulation of homocysteine metabolic process","termid":"GO:0050666"},{"relation_name":"positively_regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"positive regulation of homocysteine metabolic process","synonyms":[{"name":"activation of homocysteine metabolic process","type":"narrow"},{"name":"positive regulation of Hcy metabolic process","type":"exact"},{"name":"positive regulation of Hcy metabolism","type":"exact"},{"name":"positive regulation of homocysteine metabolism","type":"exact"},{"name":"stimulation of homocysteine metabolic process","type":"narrow"},{"name":"up regulation of homocysteine metabolic process","type":"exact"},{"name":"up-regulation of homocysteine metabolic process","type":"exact"},{"name":"upregulation of homocysteine metabolic process","type":"exact"}],"termid":"GO:0050668"}


id: FYPO:0005665
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[114483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[114100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[114052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"},{"relation_name":"output_of","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal actin cytoskeleton","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_04703","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","rga4delta","for3delta"],"synonyms":[{"name":"abnormal actin cytoskeleton physical object quality","type":"exact"}],"termid":"FYPO:0005665","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0044750
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111027],"is_not":false,"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Catalysis of the high-affinity transfer of nickel (Ni) cations from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044750","terms_by_termid":{"GO:0044750":null}}


id: PBO:0045109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMD antisense RNA 3","termid":"PBO:0045109"}


id: PBO:0077530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 243","termid":"PBO:0077530"}


id: PBO:0050179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1","termid":"PBO:0050179"}


id: PR:Q1MTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea2 gene.","definition_xrefs":["UniProtKB:Q1MTQ1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein tea2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.20c","synonyms":[{"name":"Spom972h-tea2","type":"exact"},{"name":"Tip elongation aberrant protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kinesin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1MTQ1"}


id: GO:0016010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein complex","termid":"GO:0090665"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"dystrophin-associated glycoprotein complex","synonyms":[{"name":"DGC","type":"exact"},{"name":"dystrophin glycoprotein complex","type":"exact"}],"termid":"GO:0016010"}


id: PBO:0085837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress; YKR018C has a paralog, IML2, that arose from the whole genome duplication","termid":"PBO:0085837"}


id: PBO:0062466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 157 pseudogene","termid":"PBO:0062466"}


id: PBO:0050726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 12","termid":"PBO:0050726"}


id: PBO:0059043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multimerin 2","termid":"PBO:0059043"}


id: GO:1901348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cell wall organization or biogenesis","termid":"GO:1903340"},{"relation_name":"is_a","term_name":"regulation of secondary cell wall biogenesis","termid":"GO:2000652"},{"relation_name":"positively_regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"positively_regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"positive regulation of secondary cell wall biogenesis","synonyms":[{"name":"activation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"activation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"activation of secondary cell wall anabolism","type":"broad"},{"name":"activation of secondary cell wall biogenesis","type":"narrow"},{"name":"activation of secondary cell wall biosynthetic process","type":"broad"},{"name":"activation of secondary cell wall formation","type":"broad"},{"name":"activation of secondary cell wall synthesis","type":"broad"},{"name":"positive regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"positive regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"positive regulation of secondary cell wall anabolism","type":"broad"},{"name":"positive regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"positive regulation of secondary cell wall formation","type":"broad"},{"name":"positive regulation of secondary cell wall synthesis","type":"broad"},{"name":"up regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of secondary cell wall anabolism","type":"broad"},{"name":"up regulation of secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"up regulation of secondary cell wall formation","type":"broad"},{"name":"up regulation of secondary cell wall synthesis","type":"broad"},{"name":"up-regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of secondary cell wall anabolism","type":"broad"},{"name":"up-regulation of secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"up-regulation of secondary cell wall formation","type":"broad"},{"name":"up-regulation of secondary cell wall synthesis","type":"broad"},{"name":"upregulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of secondary cell wall anabolism","type":"broad"},{"name":"upregulation of secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"upregulation of secondary cell wall formation","type":"broad"},{"name":"upregulation of secondary cell wall synthesis","type":"broad"}],"termid":"GO:1901348"}


id: PBO:0081620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 549","termid":"PBO:0081620"}


id: GO:0120091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydroxylation of jasmonic acid to 12OH-jasmonic acid.","definition_xrefs":["PMID:28760569","PMID:28559313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"jasmonic acid hydrolase","synonyms":[{"name":"2-oxoglutarate dioxygenase","type":"broad"}],"termid":"GO:0120091"}


id: GO:0010177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-4-methylthiobutanoate + acetyl-CoA + H2O = 2-(2'-methylthio)ethylmalic-acid + coenzyme A + H+.","definition_xrefs":["MetaCyc:RXN-2202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2-(2'-methylthio)ethylmalate synthase activity","secondary_identifiers":["EC:2.3.3.17"],"synonyms":[{"name":"methylthioalkylmalate synthase activity","type":"broad"}],"termid":"GO:0010177"}


id: PBO:0038385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_parasitoid","termid":"PBO:0038385"}


id: MOD:02030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively specifies the boundary conformation of two adjacent source amino acid residues, the second (C-term side) being a L-proline, where the carbonyl group of the amide bond of the N-side of the L-proline is positioned such that the organodiyl group is in the trans orientation (omega=180)","definition_xrefs":["PubMed:5485910","PubMed:15735342","ChEBI:83834","PubMed:15311922","PubMed:24116866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-peptidyl-L-proline","termid":"MOD:02030"}


id: PBO:0044736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 4","termid":"PBO:0044736"}


id: MOD:00183
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-2'-bromophenylalanine.","definition_xrefs":["DeltaMass:83","PubMed:9033387","RESID:AA0174","PubMed:2059627","PubMed:2076468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2'-bromophenylalanine","synonyms":[{"name":"(S)-2-amino-3-(2-bromophenyl)propanoic acid","type":"exact"},{"name":"2'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-2'-bromophenylalanine","type":"exact"},{"name":"L-o-bromination of Phe with 79Br","type":"exact"},{"name":"bromination","type":"related"},{"name":"o-bromophenylalanine","type":"exact"},{"name":"ortho-bromophenylalanine","type":"exact"}],"termid":"MOD:00183"}


id: PBO:0087433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0087433"}


id: GO:0007286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"spermatid differentiation","termid":"GO:0048515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid development","secondary_identifiers":["Wikipedia:Spermiogenesis"],"synonyms":[{"name":"spermatid cell development","type":"exact"},{"name":"spermiogenesis","type":"exact"}],"termid":"GO:0007286"}


id: GO:0009219
data:
  {"annotated_genes":["SJAG_02874","SJAG_03771","SJAG_04627","SJAG_04665","SJAG_00885","SJAG_04487","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87870,102445,90869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[78105,103551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[84900,70809,87872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[70807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[77756,103552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[77754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine deoxynucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide metabolic process","termid":"GO:0009394"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleotide metabolism","type":"exact"}],"termid":"GO:0009219","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0046081":null}}


id: GO:2000687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000687)","synonyms":[{"name":"negative regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000687"}


id: GO:1902989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any telomere maintenance via semi-conservative replication that is involved in meiotic cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic telomere maintenance via semi-conservative replication","synonyms":[{"name":"equal telomere replication involved in meiotic cell cycle","type":"related"},{"name":"telomeric fork progression involved in meiotic cell cycle","type":"narrow"},{"name":"telomeric replication fork progression involved in meiotic cell cycle","type":"narrow"}],"termid":"GO:1902989"}


id: PBO:0076034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32B","termid":"PBO:0076034"}


id: PBO:0012846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp46","termid":"PBO:0012846"}


id: GO:0004640
data:
  {"annotated_genes":["SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77860],"is_not":false,"summary":null,"term":"GO:0004640"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.","definition_xrefs":["RHEA:21540","EC:5.3.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylanthranilate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03509","MetaCyc:PRAISOM-RXN"],"synonyms":[{"name":"IGPS:PRAI (indole-3-glycerol-phosphate synthetase/N-5'-phosphoribosylanthranilate isomerase complex)","type":"related"},{"name":"N-(5'-phosphoribosyl)anthranilate isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate aldose-ketose-isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate ketol-isomerase activity","type":"related"},{"name":"PRA isomerase activity","type":"related"},{"name":"PRAI activity","type":"related"}],"termid":"GO:0004640","terms_by_termid":{"GO:0004640":null}}


id: PBO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketoreductase (predicted)","termid":"PBO:0001470"}


id: PBO:0029715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_absent_from_cell","termid":"PBO:0029715"}


id: PBO:0066729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 26","termid":"PBO:0066729"}


id: PBO:0049602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 5","termid":"PBO:0049602"}


id: PBO:0061333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B11","termid":"PBO:0061333"}


id: GO:0009943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the adaxial / abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial axis specification","synonyms":[{"name":"adaxial/abaxial determination","type":"related"}],"termid":"GO:0009943"}


id: PBO:0062883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OVCA2 serine hydrolase domain containing","termid":"PBO:0062883"}


id: PBO:0016519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog Gga21","termid":"PBO:0016519"}


id: PBO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5","termid":"PBO:0036485"}


id: PBO:0034214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_activates","termid":"PBO:0034214"}


id: GO:1901956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["PMID:23358451","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"is_a","term_name":"positive regulation of retrograde axon cargo transport","termid":"GO:2001019"},{"relation_name":"positively_regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde dense core granule transport","synonyms":[{"name":"activation of retrograde dense core granule transport","type":"narrow"},{"name":"up regulation of retrograde dense core granule transport","type":"exact"},{"name":"up-regulation of retrograde dense core granule transport","type":"exact"},{"name":"upregulation of retrograde dense core granule transport","type":"exact"}],"termid":"GO:1901956"}


id: PBO:0047174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 7","termid":"PBO:0047174"}


id: FYPO:0004003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing begins later than normal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["PomBase:mah","GO:0031297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of replication fork processing","synonyms":[{"name":"delayed onset of collapsed replication fork processing","type":"exact"},{"name":"delayed onset of recovery from replication fork arrest","type":"exact"},{"name":"delayed onset of recovery from replication fork stalling","type":"exact"},{"name":"delayed onset of replication fork processing during mitotic cell cycle","type":"related"},{"name":"delayed onset of replication fork processing during vegetative growth","type":"exact"},{"name":"delayed onset of replication fork restart","type":"related"},{"name":"delayed onset of replication restart","type":"related"},{"name":"delayed replication fork processing","type":"exact"}],"termid":"FYPO:0004003"}


id: GO:1904430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of t-circle formation.","definition_xrefs":["GOC:nc","GOC:TermGenie","PMID:22579284","GOC:BHF_telomere","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of t-circle formation","termid":"GO:1904429"},{"relation_name":"negatively_regulates","term_name":"t-circle formation","termid":"GO:0090656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259","GO:0044085"],"is_obsolete":false,"name":"negative regulation of t-circle formation","synonyms":[{"name":"down regulation of t-circle formation","type":"exact"},{"name":"down regulation of telomeric circle formation","type":"exact"},{"name":"down-regulation of t-circle formation","type":"exact"},{"name":"down-regulation of telomeric circle formation","type":"exact"},{"name":"downregulation of t-circle formation","type":"exact"},{"name":"downregulation of telomeric circle formation","type":"exact"},{"name":"inhibition of t-circle formation","type":"narrow"},{"name":"inhibition of telomeric circle formation","type":"narrow"},{"name":"negative regulation of telomeric circle formation","type":"exact"}],"termid":"GO:1904430"}


id: RO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x proper_tributary_of y iff x tributary_of y and x does not originate from y","direct_ancestors":[{"relation_name":"is_a","term_name":"tributary_of","termid":"RO:0002376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proper_tributary_of","termid":"RO:0002383"}


id: FYPO:0005693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from one or more microtubule organizing centers (MTOCs) is does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation during mitotic cell cycle","type":"related"},{"name":"abolished cytoplasmic microtubule nucleation during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubule nucleation abolished","type":"exact"}],"termid":"FYPO:0005693"}


id: PBO:0060790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S1","termid":"PBO:0060790"}


id: PBO:0088284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm2","termid":"PBO:0088284"}


id: PBO:0051547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7","termid":"PBO:0051547"}


id: SO:0000762
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000762 PAC_clone (obsolete SO:0000762)","synonyms":[{"name":"P1_clone","type":"related"}],"termid":"SO:0000762"}


id: PBO:0004171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein (predicted)","termid":"PBO:0004171"}


id: PBO:0082779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sum1p-Rfm1p-Hst1p complex; Rfm1p tethers the Hst1p histone deacetylase to the DNA-binding protein Sum1p; complex is involved in transcriptional repression of middle sporulation genes and in initiation of DNA replication","termid":"PBO:0082779"}


id: PBO:0055427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2857","termid":"PBO:0055427"}


id: PBO:0054404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1800","termid":"PBO:0054404"}


id: GO:0141107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a methyltransferase.","definition_xrefs":["PMID:34669960","PMID:15899842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"methyltransferase regulator activity","termid":"GO:0141107"}


