# terms

id: GO:1903598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gap junction assembly.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","PMID:25017399","GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"is_a","term_name":"regulation of gap junction assembly","termid":"GO:1903596"},{"relation_name":"positively_regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gap junction assembly","synonyms":[{"name":"activation of gap junction assembly","type":"narrow"},{"name":"up regulation of gap junction assembly","type":"exact"},{"name":"up-regulation of gap junction assembly","type":"exact"},{"name":"upregulation of gap junction assembly","type":"exact"}],"termid":"GO:1903598"}


id: GO:0050547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-3-(4-hydroxy-3-methoxyphenyl)propanoyl-CoA = acetyl-CoA + vanillin.","definition_xrefs":["RHEA:18725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"vanillin synthase activity","secondary_identifiers":["EC:4.1.2.61","KEGG_REACTION:R05773","MetaCyc:4.1.2.41-RXN"],"synonyms":[{"name":"3-hydroxy-3-(4-hydroxy-3-methoxyphenyl)propanoyl-CoA vanillin-lyase (acetyl-CoA-forming)","type":"related"},{"name":"3-hydroxy-3-(4-hydroxy-3-methoxyphenyl)propionyl-CoA:vanillin lyase (acetyl-CoA-forming)","type":"related"}],"termid":"GO:0050547"}


id: GO:0072387
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"flavin adenine dinucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"FAD or FADH2 metabolic process","type":"exact"},{"name":"flavin adenine dinucleotide metabolism","type":"exact"},{"name":"flavin-adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0072387","terms_by_termid":{"GO:0006747":null}}


id: GO:0140655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The multiplication of mitochondria, resulting in the expansion of the number of mitochondria within a cell.","definition_xrefs":["PMID:28301064"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proliferation (obsolete GO:0140655)","termid":"GO:0140655"}


id: GO:0031664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031664"}


id: PBO:0077927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 antisense RNA 1","termid":"PBO:0077927"}


id: PBO:0063863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 pseudogene 2","termid":"PBO:0063863"}


id: PBO:0084461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase of the cis-Golgi apparatus; initiates the polymannose outer chain elongation of N-linked oligosaccharides of glycoproteins","termid":"PBO:0084461"}


id: PBO:0067318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 404, pseudogene","termid":"PBO:0067318"}


id: PBO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo12 family protein","termid":"PBO:0001767"}


id: PBO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator (predicted)","termid":"PBO:0001353"}


id: GO:0000502
data:
  {"annotated_genes":["SJAG_00762","SJAG_04229","SJAG_03638","SJAG_01652","SJAG_00778","SJAG_04572","SJAG_04888","SJAG_01489","SJAG_01131","SJAG_00766","SJAG_04088","SJAG_04211","SJAG_03151","SJAG_04306","SJAG_04484","SJAG_00128","SJAG_04357","SJAG_00712","SJAG_03408","SJAG_04541","SJAG_00808","SJAG_02341","SJAG_05316","SJAG_00738","SJAG_04969","SJAG_01544","SJAG_04477","SJAG_03321","SJAG_02900","SJAG_04144","SJAG_02992","SJAG_02502","SJAG_01203","SJAG_02562","SJAG_01014"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105460],"is_not":false,"summary":null,"term":"GO:0000502"},{"annotations":[72524,71765,72076,69803,74487,76991,74146],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019773"},{"annotations":[112815,93047,106263,88765,89408,91596,105844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019774"},{"annotations":[78201,102263,72564,92110,99326,105374,94269,110230,112407],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[72317,92456,94270,110202,72992,73375,73495,77798,106337,71071,76734,75377],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core.","definition_xrefs":["Wikipedia:Proteasome","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_00778":null,"SJAG_00808":null,"SJAG_01014":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02341":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03151":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04229":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04541":null,"SJAG_04572":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"26S proteasome","type":"narrow"},{"name":"proteasome","type":"exact"}],"termid":"GO:0000502","terms_by_termid":{"GO:0000502":null,"GO:0008540":null,"GO:0008541":null,"GO:0019773":null,"GO:0019774":null}}


id: PBO:0064240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 3","termid":"PBO:0064240"}


id: PBO:0088816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyldihydroxyacetone phosphate reductase Ayr1","termid":"PBO:0088816"}


id: GO:0015418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + quaternary ammonium(out) = ADP + H+ + phosphate + quaternary ammonium(in).","definition_xrefs":["GOC:pz","RHEA:11036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type quaternary ammonium compound transporting activity","secondary_identifiers":["MetaCyc:RXN-8665","EC:7.6.2.9","GO:0102908"],"synonyms":[{"name":"quaternary-ammonium-compound-transporting ATPase activity","type":"related"},{"name":"ATP-dependent quaternary-ammonium compound transmembrane transporting activity","type":"related"},{"name":"ATPase-coupled quaternary ammonium compound transmembrane transporting activity","type":"related"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"quarternary amine transporter activity","type":"broad"},{"name":"quaternary amine uptake transporter activity","type":"related"},{"name":"quaternary-amine-transporting ATPase activity","type":"related"},{"name":"quaternary-ammonium-compound ABC transporter","type":"exact"}],"termid":"GO:0015418"}


id: GO:0006909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process that results in the engulfment of external particulate material by phagocytes and their delivery to the lysosome. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phagocytosis","secondary_identifiers":["Wikipedia:Phagocytosis"],"termid":"GO:0006909"}


id: GO:0102619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin A + NAD(P) = oryzalexin C + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin C synthase (oryzalexin A dependent) activity (obsolete GO:0102619)","termid":"GO:0102619"}


id: PBO:0082077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'- and 3'-flap DNA binding protein; required for recruitment of Rad1p-Rad10p to single-strand annealing intermediates with 3' non-homologous tails for removal during double-strand break repair; forms a complex with Rad1p-Rad10p and stimulates its endonuclease activity; green fluorescent protein (GFP)-fusion protein localizes to the nucleus","termid":"PBO:0082077"}


id: GO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-excision repair","termid":"GO:2000819"},{"relation_name":"regulates","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"regulation of transcription-coupled nucleotide-excision repair","termid":"GO:0090262"}


id: PBO:0026950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_vorinostat","termid":"PBO:0026950"}


id: PBO:0065063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perforin 1","termid":"PBO:0065063"}


id: PR:P87243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rix1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein rix1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.18","synonyms":[{"name":"Spom972h-rix1","type":"exact"}],"termid":"PR:P87243"}


id: PBO:0056265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 1","termid":"PBO:0056265"}


id: PBO:0081708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 628","termid":"PBO:0081708"}


id: GO:0050254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + rhodopsin = ADP + phosphorhodopsin.","definition_xrefs":["PMID:14654303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor kinase activity","termid":"GO:0004703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0004672","GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"rhodopsin kinase activity","secondary_identifiers":["MetaCyc:2.7.11.14-RXN","Reactome:R-HSA-2581474","EC:2.7.11.14","RHEA:23356"],"synonyms":[{"name":"GPCR kinase 1 activity","type":"narrow"},{"name":"cone opsin kinase activity","type":"narrow"},{"name":"opsin kinase (phosphorylating) activity","type":"related"},{"name":"opsin kinase activity","type":"related"},{"name":"rhodopsin kinase (phosphorylating) activity","type":"exact"}],"termid":"GO:0050254"}


id: PBO:0047991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member H, pseudogene","termid":"PBO:0047991"}


id: PBO:0036041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036041"}


id: MOD:01154
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid to pyruvic acid.","definition_xrefs":["RESID:AA0127","PubMed:8464063","PubMed:10085076","PubMed:3042771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"MOD_RES Pyruvic acid (Ser)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01154"}


id: PBO:0049556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 18","termid":"PBO:0049556"}


id: GO:0019329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which ammonia or ammonium is converted to molecular nitrogen or another nitrogen compound, with accompanying loss of electrons.","definition_xrefs":["GOC:mah","MetaCyc:P303-PWY","MetaCyc:AMMOXID-PWY","MetaCyc:PWY-2242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound metabolic process","termid":"GO:0006807"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ammonia oxidation","termid":"GO:0019329"}


id: GO:0008721
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77468],"is_not":false,"summary":null,"term":"GO:0008721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-serine = pyruvate + NH3.","definition_xrefs":["EC:4.3.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"D-serine ammonia-lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9034539","MetaCyc:DSERDEAM-RXN","Reactome:R-HSA-9014741","RHEA:13977"],"synonyms":[{"name":"D-hydroxy amino acid dehydratase activity","type":"broad"},{"name":"D-hydroxyaminoacid dehydratase activity","type":"related"},{"name":"D-serine ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"D-serine deaminase activity","type":"related"},{"name":"D-serine dehydrase activity","type":"related"},{"name":"D-serine dehydratase (deaminating) activity","type":"related"},{"name":"D-serine dehydratase activity","type":"related"},{"name":"D-serine dehydration activity","type":"related"},{"name":"D-serine hydro-lyase (deaminating) activity","type":"related"},{"name":"D-serine hydrolase activity","type":"related"}],"termid":"GO:0008721","terms_by_termid":{"GO:0008721":null}}


id: PBO:0076105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 10","termid":"PBO:0076105"}


id: PBO:0038271
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_doi","termid":"PBO:0038271"}


id: FYPO:0002825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle","synonyms":[{"name":"decreased protein localisation to mitotic spindle","type":"exact"},{"name":"decreased protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle during mitosis","type":"exact"},{"name":"decreased protein localization to spindle during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0002825"}


id: PBO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by vertebrate vCaM","termid":"PBO:0013025"}


id: GO:0036219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = GMP + H+ + diphosphate.","definition_xrefs":["RHEA:29391","PMID:22531138","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0047429"],"is_obsolete":false,"name":"GTP diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R00426"],"synonyms":[{"name":"GTP diphosphohydrolase (diphosphate-forming); guanosine 5'-triphosphate pyrophosphohydrolase","type":"exact"},{"name":"GTP diphosphohydrolase activity","type":"exact"},{"name":"GTP pyrophosphatase activity","type":"exact"}],"termid":"GO:0036219"}


id: PBO:0057870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-3","termid":"PBO:0057870"}


id: GO:0033099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded extension of the cell, originally characterized in Mycoplasma species, that contains an electron-dense core that is part of the cytoskeleton and is oriented lengthwise and ends distally in a bulbous knob (terminal button). Required for adherence to host cells and involved in gliding motility and cell division.","definition_xrefs":["PMID:12003948","PMID:11325545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"attachment organelle","termid":"GO:0033099"}


id: PBO:0040477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATXN1 antisense RNA 1","termid":"PBO:0040477"}


id: GO:0160082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-prolyl-[hypoxia-inducible factor alpha subunit] + O2 = CO2 + succinate + trans-4-hydroxy-L-prolyl-[hypoxia-inducible factor alpha subunit].","definition_xrefs":["PMID:11595184","PMID:11598268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline 4-dioxygenase activity","termid":"GO:0031545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"hypoxia-inducible factor-proline dioxygenase activity","secondary_identifiers":["RHEA:48400","EC:1.14.11.29"],"synonyms":[{"name":"HIF hydroxylase","type":"broad"},{"name":"HIF prolyl hydroxylase","type":"exact"}],"termid":"GO:0160082"}


id: GO:0008404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-14,15-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:10681399","RHEA:51472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonic acid 14,15-epoxygenase activity","synonyms":[{"name":"cytochrome P450 CYP2C29","type":"narrow"},{"name":"cytochrome P450 CYP2C39","type":"narrow"}],"termid":"GO:0008404"}


id: GO:0042501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group to a serine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:10918594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"},{"relation_name":"part_of","term_name":"regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serine phosphorylation of STAT protein","secondary_identifiers":["GO:0033136"],"synonyms":[{"name":"serine phosphorylation of STAT3 protein","type":"narrow"}],"termid":"GO:0042501"}


id: FYPO:0007039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased, and the protein is instead visible in one or a few foci or dots in the cytoplasm.","definition_xrefs":["PMID:30181366","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitochondrion","termid":"FYPO:0007038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"decreased protein localisation to mitochondrion, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"decreased protein localization to mitochondrion, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"}],"termid":"FYPO:0007039"}


id: GO:0043931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state.","definition_xrefs":["GOC:mtg_mpo","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"},{"relation_name":"part_of","term_name":"bone maturation","termid":"GO:0070977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ossification involved in bone maturation","synonyms":[{"name":"ossification involved in bone modeling","type":"narrow"},{"name":"ossification involved in skeletal development","type":"exact"}],"termid":"GO:0043931"}


id: PR:Q9C0W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A palmitoyltransferase ZDHHC2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase PFA5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.01","secondary_identifiers":["UniProtKB:Q9C0W9"],"synonyms":[{"name":"Spom972h-ZDHHC2","type":"exact"},{"name":"protein fatty acyltransferase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0W9"}


id: PATO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated purple","synonyms":[{"name":"bright purple","type":"related"}],"termid":"PATO:0001281"}


id: PR:O94438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps102 gene.","definition_xrefs":["UniProtKB:O94438","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S1-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.04c","synonyms":[{"name":"S3aE-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps102","type":"exact"}],"termid":"PR:O94438"}


id: PBO:0081401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF248 antisense RNA 1","termid":"PBO:0081401"}


id: PBO:0012059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain","termid":"PBO:0012059"}


id: FYPO:0006647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA/RNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}


id: PBO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication pre-initiation complex subunit Sld3","termid":"PBO:0000386"}


id: PBO:0070353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 26","termid":"PBO:0070353"}


id: PATO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000473 relative_quality value (obsolete PATO:0000473)","termid":"PATO:0000473"}


id: PBO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 19","termid":"PBO:0075207"}


id: PBO:0044816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108E (pseudogene)","termid":"PBO:0044816"}


id: PBO:0055731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain 7","termid":"PBO:0055731"}


id: PBO:0064875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 35","termid":"PBO:0064875"}


id: GO:0033086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extrathymic T cell differentiation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrathymic T cell differentiation","termid":"GO:0033082"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"negatively_regulates","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of extrathymic T cell differentiation","synonyms":[{"name":"negative regulation of extrathymic T cell development","type":"related"}],"termid":"GO:0033086"}


id: GO:0046236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandelate metabolic process","termid":"GO:0018924"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"mandelate biosynthetic process","synonyms":[{"name":"mandelate anabolism","type":"exact"},{"name":"mandelate biosynthesis","type":"exact"},{"name":"mandelate formation","type":"exact"},{"name":"mandelate synthesis","type":"exact"}],"termid":"GO:0046236"}


id: GO:0003822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MHC-interacting protein (obsolete GO:0003822)","synonyms":[{"name":"MHC-interacting protein","type":"exact"}],"termid":"GO:0003822"}


id: PBO:0092038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor, glutathione S-transferase","termid":"PBO:0092038"}


id: MOD:00613
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:10906242","Unimod:294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotinoyl-iodoacetyl-ethylenediamine","synonyms":[{"name":"IED-Biotin","type":"related"},{"name":"biotinoyl-iodoacetyl-ethylenediamine","type":"related"}],"termid":"MOD:00613"}


id: PBO:0084664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 5'-3' exonuclease and sliding exonuclease; required for mitochondrial genome maintenance; distantly related to the RecB nuclease domain of bacterial RecBCD recombinases; may be regulated by the transcription factor Ace2","termid":"PBO:0084664"}


id: PBO:0053995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1317","termid":"PBO:0053995"}


id: PBO:0065195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 6","termid":"PBO:0065195"}


id: GO:0060604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the mammary gland duct by the hollowing out of a solid rod.","definition_xrefs":["PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube lumen cavitation","termid":"GO:0060605"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland duct cavitation","synonyms":[{"name":"milk duct cavitation","type":"related"}],"termid":"GO:0060604"}


id: GO:1904126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any convergent extension that is involved in notochord morphogenesis.","definition_xrefs":["PMID:24892953","GOC:dph","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"notochord morphogenesis","termid":"GO:0048570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}


id: GO:0005029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete CD27 receptor activity (obsolete GO:0005029)","synonyms":[{"name":"CD27 receptor activity","type":"exact"}],"termid":"GO:0005029"}


id: FYPO:0006459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein modification is abnormal during the meiotic cell cycle. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}


id: PBO:0034476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_spindle_during_meiosis_I","termid":"PBO:0034476"}


id: PBO:0047835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box Q1","termid":"PBO:0047835"}


id: PBO:0027536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_5'-3'_DNA_helicase_activity","termid":"PBO:0027536"}


id: GO:0071860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proctolin receptor.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"proctolin receptor binding","termid":"GO:0071860"}


id: GO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phylloquinone, a quinone-derived compound synthesized by green plants. Phylloquinone has vitamin K activity and is known as vitamin K1.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phylloquinone metabolic process","synonyms":[{"name":"phylloquinone metabolism","type":"exact"},{"name":"phytomenadione metabolic process","type":"exact"},{"name":"phytomenadione metabolism","type":"exact"},{"name":"phytonadione metabolic process","type":"exact"},{"name":"phytonadione metabolism","type":"exact"},{"name":"phytylmenaquinone metabolic process","type":"exact"},{"name":"phytylmenaquinone metabolism","type":"exact"},{"name":"vitamin K1 metabolic process","type":"exact"},{"name":"vitamin K1 metabolism","type":"exact"}],"termid":"GO:0042374"}


id: GO:0015759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"beta-glucoside transport","termid":"GO:0015759"}


id: PBO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_G0_to_G1_transition","termid":"PBO:0031773"}


id: PR:G2TRU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX assembly mitochondrial protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.20","synonyms":[{"name":"Cx9C motif-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cmc2","type":"exact"}],"termid":"PR:G2TRU5"}


id: PBO:0063761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 2","termid":"PBO:0063761"}


id: GO:0120247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound biosynthetic process","synonyms":[{"name":"alkyne substituted compound anabolic process","type":"exact"},{"name":"alkyne substituted compound anabolism","type":"exact"},{"name":"alkyne substituted compound biosynthesis","type":"exact"},{"name":"alkyne substituted compound biosynthetic process","type":"exact"},{"name":"alkyne substituted compound synthesis","type":"exact"}],"termid":"GO:0120247"}


id: PomGeneEx:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PomGeneEx:0000006"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein absent","synonyms":[{"name":"protein expression absent","type":"exact"}],"termid":"PomGeneEx:0000022"}


id: PBO:0060859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA-related kinase 4 pseudogene 1","termid":"PBO:0060859"}


id: PBO:0091695
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Knockout","termid":"PBO:0091695"}


id: GO:1905457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphoid progenitor cell differentiation.","definition_xrefs":["PMID:27010503","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901533"},{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"negatively_regulates","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphoid progenitor cell differentiation","synonyms":[{"name":"down regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"down-regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"downregulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"inhibition of lymphoid progenitor cell differentiation","type":"narrow"}],"termid":"GO:1905457"}


id: PBO:0081732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 663, pseudogene","termid":"PBO:0081732"}


id: PBO:0017450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-overlaps","termid":"PBO:0017450"}


id: PBO:0080693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 1","termid":"PBO:0080693"}


id: GO:1905375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a homocysteine stimulus.","definition_xrefs":["GO_REF:0000071","PMID:26722473","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to homocysteine","termid":"GO:1905374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to homocysteine","synonyms":[{"name":"cellular response to 2-amino-4-mercaptobutyric acid","type":"exact"},{"name":"cellular response to 2-amino-4-sulfanylbutanoic acid","type":"exact"},{"name":"cellular response to Hcy","type":"exact"}],"termid":"GO:1905375"}


id: PBO:0043050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin like EF-hand protein 1","termid":"PBO:0043050"}


id: FYPO:0004914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit differs from normal.","definition_xrefs":["PMID:18157152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomeric repeat sequence","termid":"FYPO:0004914"}


id: PBO:0083831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanolamine kinase; primarily responsible for phosphatidylethanolamine synthesis via the CDP-ethanolamine pathway; exhibits some choline kinase activity, thus contributing to phosphatidylcholine synthesis via the CDP-choline pathway; EKI1 has a paralog, CKI1, that arose from the whole genome duplication","termid":"PBO:0083831"}


id: PBO:0067279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 359, pseudogene","termid":"PBO:0067279"}


id: PBO:0066131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 9","termid":"PBO:0066131"}


id: PBO:0026905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_H4-K20_dimethylation","termid":"PBO:0026905"}


id: MOD:01697
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an 4-(2-aminoethyl)benzenesulfonyl group.","definition_xrefs":["PubMed:8597590","DeltaMass:235","Unimod:276#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino 4-(2-aminoethyl)benzenesulfonylated residue","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01697"}


id: PBO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_model_of","termid":"PBO:0034205"}


id: PBO:0030494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-destabilized_iron-sulfur_cluster_binding","termid":"PBO:0030494"}


id: PBO:0079539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase 1 like 1","termid":"PBO:0079539"}


id: PR:O14284
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug63 gene.","definition_xrefs":["UniProtKB:O14284","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation resistance protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.16c","synonyms":[{"name":"Spom972h-mug63","type":"exact"},{"name":"meiotically up-regulated gene 63 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14284"}


id: PBO:0080692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 4","termid":"PBO:0080692"}


id: PBO:0072861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl-tRNA synthetase 2, mitochondrial","termid":"PBO:0072861"}


id: FYPO:0001079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal galactomannan level","synonyms":[{"name":"normal cellular galactomannan level","type":"exact"},{"name":"normal galactomannan accumulation","type":"related"},{"name":"normal galactomannan level during mitotic cell cycle","type":"related"},{"name":"normal galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001079"}


id: GO:1900881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 18-methylnonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"18-methylnonadec-1-ene formation","type":"exact"},{"name":"18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900881"}


id: PBO:0059198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X5, pseudogene","termid":"PBO:0059198"}


id: PR:O94468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mag2 gene.","definition_xrefs":["UniProtKB:O94468","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.11","synonyms":[{"name":"3-methyladenine DNA glycosidase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3MEA DNA glycosylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mag2","type":"exact"}],"termid":"PR:O94468"}


id: GO:0102656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-trans-16:1-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-18:2-2-trans-16:1-phosphatidylglycerol desaturase activity","secondary_identifiers":["MetaCyc:RXN-1727"],"termid":"GO:0102656"}


id: PBO:0029609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_tapered_vegetative_cell","termid":"PBO:0029609"}


id: GO:0005073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete common-partner SMAD protein (obsolete GO:0005073)","synonyms":[{"name":"common-partner SMAD protein","type":"exact"}],"termid":"GO:0005073"}


id: GO:1902495
data:
  {"annotated_genes":["SJAG_04675","SJAG_07006","SJAG_00755","SJAG_MIT03","SJAG_03490","SJAG_00601","SJAG_01763","SJAG_01490","SJAG_04677","SJAG_02646","SJAG_00080","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87884,76608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[85476,108482,110145,112663,74702,113982,99331,103141,113116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005750"},{"annotations":[73635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex which enables the transfer of a substance from one side of a membrane to the other.","definition_xrefs":["PMID:18024586","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_05229":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transmembrane transporter complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902495","terms_by_termid":{"GO:0005750":null,"GO:0005891":null,"GO:0033573":null}}


id: PBO:0026920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K8_acetylation","termid":"PBO:0026920"}


id: PBO:0046892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM13B antisense RNA 1","termid":"PBO:0046892"}


id: PBO:0086890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of sorbitol with moderate affinity and mannitol with lower affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; similarity to hexose transporters; expression is repressed by high levels of glucose","termid":"PBO:0086890"}


id: PR:O94415
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04968","PANTHER:PTHR11815:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.08","secondary_identifiers":["UniProtKB:O94415"],"synonyms":[{"name":"SCS-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SUCLA2","type":"exact"},{"name":"succinyl-CoA synthetase beta chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94415"}


id: GO:0046074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dTMP, deoxyribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009178"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dTMP metabolic process","termid":"GO:0046073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dTMP catabolic process","synonyms":[{"name":"dTMP breakdown","type":"exact"},{"name":"dTMP catabolism","type":"exact"},{"name":"dTMP degradation","type":"exact"}],"termid":"GO:0046074"}


id: PBO:0062624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 1","termid":"PBO:0062624"}


id: PBO:0080310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 74 pseudogene","termid":"PBO:0080310"}


id: PBO:0090452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex ATP-dependent chromatin remodeller Mit1","termid":"PBO:0090452"}


id: PBO:0084794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in assembly of succinate dehydrogenase; has a role in maturation of the Sdh2p subunit; localized to the mitochondrial intermembrane space; required for acetate utilization and gluconeogenesis; mutation in Drosophila ortholog SDHAF3 causes reduced succinate dehydrogenase activity and neuronal and muscular dysfunction; member of the LYR protein family","termid":"PBO:0084794"}


id: PBO:0045860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 50","termid":"PBO:0045860"}


id: PBO:0080134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP associated protein B and C","termid":"PBO:0080134"}


id: PBO:0051935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain family member 6","termid":"PBO:0051935"}


id: SO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene caused by unequal crossing over at recombination.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene_by_unequal_crossing_over","synonyms":[{"name":"pseudogene by unequal crossing over","type":"exact"}],"termid":"SO:0000044"}


id: PBO:0061748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1 pseudogene 1","termid":"PBO:0061748"}


id: GO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The carboxylation of the N-terminal methionine of proteins to form the derivative N-carboxy-L-methionine.","definition_xrefs":["RESID:AA0363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid carboxylation","termid":"GO:0050989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-methionine carboxylation","termid":"GO:0050988"}


id: PBO:0041810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium regulated heat stable protein 1","termid":"PBO:0041810"}


id: PBO:0029118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_tapered_cell","termid":"PBO:0029118"}


id: FYPO:0005481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an diphosphoinositol-pentakisphosphate kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal diphosphoinositol-pentakisphosphate kinase activity","synonyms":[{"name":"normal PP-InsP5 kinase activity","type":"exact"}],"termid":"FYPO:0005481"}


id: PBO:0064475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma, catalytic subunit","termid":"PBO:0064475"}


id: PBO:0060151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 2","termid":"PBO:0060151"}


id: PBO:0080542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 1","termid":"PBO:0080542"}


id: PBO:0070759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 15","termid":"PBO:0070759"}


id: GO:0034074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene = marneral.","definition_xrefs":["PMID:16425307","PMID:18033581","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"marneral synthase activity","secondary_identifiers":["MetaCyc:RXN-9664","RHEA:31875"],"termid":"GO:0034074"}


id: PBO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase (predicted)","termid":"PBO:0004890"}


id: GO:0072257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the metanephric nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}


id: PBO:0110189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane formation Mug56","termid":"PBO:0110189"}


id: GO:0009535
data:
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id: GO:1904135
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id: GO:0018660
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id: PBO:0035919
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id: PBO:0039380
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id: GO:2000898
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id: PBO:0005291
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id: GO:0102186
data:
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id: GO:1903988
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id: GO:0060137
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id: PBO:0069778
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id: GO:2001173
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001173)","synonyms":[{"name":"regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001173"}


id: GO:0005739
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id: MOD:01633
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id: FYECO:0000317
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id: PBO:0086482
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id: GO:0046147
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id: GO:1990659
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id: GO:0032130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a sterol-rich region of the plasma membrane at the cell surface overlying the contractile ring.","definition_xrefs":["PMID:15517003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"medial membrane band assembly","synonyms":[{"name":"medial membrane band formation","type":"related"}],"termid":"GO:0032130"}


id: PBO:0058924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7c","termid":"PBO:0058924"}


id: GO:0008463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-methionine + H2O = L-methionine + formate.","definition_xrefs":["EC:3.5.1.31","RHEA:17781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"formylmethionine deformylase activity","secondary_identifiers":["MetaCyc:FORMYLMETHIONINE-DEFORMYLASE-RXN","KEGG_REACTION:R00653"],"synonyms":[{"name":"N-formyl-L-methionine amidohydrolase activity","type":"related"}],"termid":"GO:0008463"}


id: PBO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processive helicase activity of Mcm4/6/7 complex requires 3' and 5' overhangs","termid":"PBO:0012046"}


id: PBO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 141 pseudogene","termid":"PBO:0070212"}


id: PBO:0030260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tetracycline","termid":"PBO:0030260"}


id: PBO:0059491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1","termid":"PBO:0059491"}


id: GO:1903386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:21724833","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"negatively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of homophilic cell adhesion","synonyms":[{"name":"down regulation of homophilic cell adhesion","type":"exact"},{"name":"down-regulation of homophilic cell adhesion","type":"exact"},{"name":"downregulation of homophilic cell adhesion","type":"exact"},{"name":"inhibition of homophilic cell adhesion","type":"narrow"}],"termid":"GO:1903386"}


id: FYPO:0001712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular coenzyme Q10 level","termid":"FYPO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"coenzyme Q10 absent from cell","synonyms":[{"name":"UQ-10 absent from cell","type":"exact"},{"name":"coenzyme Q10 absent from cell during mitotic cell cycle","type":"related"},{"name":"coenzyme Q10 absent from cell during vegetative growth","type":"exact"},{"name":"ubiquinone 10 absent from cell","type":"exact"}],"termid":"FYPO:0001712"}


id: GO:0090691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that specifies plant organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of plant organ boundary","termid":"GO:0090691"}


id: SO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the 3' exon that is not coding.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_region_of_exon","termid":"SO:0001214"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_noncoding_region","synonyms":[{"name":"three prime coding exon noncoding region","type":"exact"},{"name":"three_prime_exon_noncoding_region","type":"exact"}],"termid":"SO:0000484"}


id: GO:0033950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the exohydrolysis of 1,4-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"xyloglucan-specific exo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.155-RXN"],"synonyms":[{"name":"Cel74A","type":"related"},{"name":"[(1->6)-alpha-D-xylo]-(1->4)-beta-D-glucan exo-glucohydrolase activity","type":"related"}],"termid":"GO:0033950"}


id: GO:0062155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that serves as a channel for the secretion of curli. Curli are a fibers that serve as a major component of the extracellular matrix of pellicle biofilms.","definition_xrefs":["PMID:25219853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"curli secretion complex","termid":"GO:0062155"}


id: PBO:0064855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14C","termid":"PBO:0064855"}


id: GO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + (4S)-limonene-1,2-epoxide.","definition_xrefs":["MetaCyc:RXN-9409","PMID:8820855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-limonene 1,2-monooxygenase activity","secondary_identifiers":["EC:1.14.13.107","KEGG_REACTION:R09389","KEGG_REACTION:R09385"],"synonyms":[{"name":"(-)-limonene 1,2-monooxygenase activity","type":"related"},{"name":"(-)-limonene,NAD(P)H:oxygen oxidoreductase activity","type":"related"},{"name":"(S)-limonene,NAD(P)H:oxygen oxidoreductase activity","type":"exact"}],"termid":"GO:0052601"}


id: GO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP catabolic process (obsolete GO:0006184)","synonyms":[{"name":"GTP breakdown","type":"exact"},{"name":"GTP catabolism","type":"exact"},{"name":"GTP degradation","type":"exact"},{"name":"GTP hydrolysis","type":"narrow"}],"termid":"GO:0006184"}


id: GO:0032929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide anion generation","termid":"GO:0032928"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of superoxide anion generation","synonyms":[{"name":"down regulation of superoxide release","type":"exact"},{"name":"down-regulation of superoxide release","type":"exact"},{"name":"downregulation of superoxide release","type":"exact"},{"name":"inhibition of superoxide release","type":"narrow"},{"name":"negative regulation of superoxide release","type":"exact"}],"termid":"GO:0032929"}


id: PBO:0061955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 9 pseudogene","termid":"PBO:0061955"}


id: PBO:0017998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein Erb1 (predicted)","termid":"PBO:0017998"}


id: GO:0102910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 2 coniferol + O2 = (+)-pinoresinol + 2 H2O.","definition_xrefs":["GOC:pz","EC:1.10.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dirigent protein activity","secondary_identifiers":["MetaCyc:RXN-8677"],"termid":"GO:0102910"}


id: FYPO:0004299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 5'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished polynucleotide 5'-phosphatase activity","synonyms":[{"name":"polynucleotide 5'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004299"}


id: PBO:0066999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL3","termid":"PBO:0066999"}


id: MOD:01108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid, glutamtic acid anisole adduct.","definition_xrefs":["DeltaMass:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"anisyl modified residue","termid":"MOD:01007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid (Glu)","synonyms":[{"name":"anisole adducted glutamyl","type":"exact"}],"termid":"MOD:01108"}


id: GO:0036417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the stability of a tRNA molecule, making it more vulnerable to degradative processes.","definition_xrefs":["GOC:aa","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA stability","termid":"GO:0036415"},{"relation_name":"is_a","term_name":"RNA destabilization","termid":"GO:0050779"},{"relation_name":"is_a","term_name":"positive regulation of tRNA catabolic process","termid":"GO:1902372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0044248","GO:0010467"],"is_obsolete":false,"name":"tRNA destabilization","termid":"GO:0036417"}


id: GO:1904899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["PMID:15358192","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast proliferation","termid":"GO:0048146"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell proliferation","termid":"GO:1904897"},{"relation_name":"positively_regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatic stellate cell proliferation","synonyms":[{"name":"activation of Ito cell proliferation","type":"narrow"},{"name":"activation of hepatic perisinusoidal cell proliferation","type":"narrow"},{"name":"activation of hepatic stellate cell proliferation","type":"narrow"},{"name":"activation of perisinusoidal cell proliferation","type":"narrow"},{"name":"positive regulation of Ito cell proliferation","type":"exact"},{"name":"positive regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"positive regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"up regulation of Ito cell proliferation","type":"exact"},{"name":"up regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"up regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"up regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"up-regulation of Ito cell proliferation","type":"exact"},{"name":"up-regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"up-regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"up-regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"upregulation of Ito cell proliferation","type":"exact"},{"name":"upregulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"upregulation of hepatic stellate cell proliferation","type":"exact"},{"name":"upregulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904899"}


id: PBO:0073975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 31","termid":"PBO:0073975"}


id: PBO:0081075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 7","termid":"PBO:0081075"}


id: PBO:0081600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 524","termid":"PBO:0081600"}


id: PBO:0075845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 6","termid":"PBO:0075845"}


id: GO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:dph","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition, DNA-mediated (obsolete GO:0000336)","synonyms":[{"name":"activation of DNA transposition","type":"narrow"},{"name":"positive regulation of DNA transposition","type":"exact"},{"name":"stimulation of DNA transposition","type":"narrow"},{"name":"up regulation of DNA transposition","type":"exact"},{"name":"up-regulation of DNA transposition","type":"exact"},{"name":"upregulation of DNA transposition","type":"exact"}],"termid":"GO:0000336"}


id: PBO:0046279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 1","termid":"PBO:0046279"}


id: PATO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of unique homologous chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Monoploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoploid","termid":"PATO:0001376"}


id: PBO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase C, Css1","termid":"PBO:0004202"}


id: PBO:0040655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-butyrobetaine hydroxylase 1","termid":"PBO:0040655"}


id: PR:Q9UUF4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17A3.02 gene.","definition_xrefs":["UniProtKB:Q9UUF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered inheritance of mitochondria protein 19 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.02","synonyms":[{"name":"Spom972h-SPBC17A3.02","type":"exact"}],"termid":"PR:Q9UUF4"}


id: PBO:0017454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-interacts_with","termid":"PBO:0017454"}


id: FYPO:0006046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which in which chromosomes do not align at the midpoint of the long axis of the mitotic spindle during metaphase chromosome congression.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000138","FYPO:0000337"],"is_obsolete":false,"name":"uncentered mitotic chromosome congression","synonyms":[{"name":"abnormal mitotic chromosome congression with loss of chromosome centering","type":"exact"},{"name":"loss of mitotic chromosome centering","type":"exact"},{"name":"uncentered chromosome congression during mitosis","type":"exact"},{"name":"uncentered chromosome congression during mitotic metaphase","type":"exact"},{"name":"uncentered mitotic chromosome congression during vegetative growth","type":"exact"}],"termid":"FYPO:0006046"}


id: PR:Q10482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysosomal amino acid transporter 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.10","secondary_identifiers":["UniProtKB:Q10482"],"synonyms":[{"name":"Spom972h-PQLC2","type":"exact"}],"termid":"PR:Q10482"}


id: GO:0009067
data:
  {"annotated_genes":["SJAG_00869","SJAG_02293","SJAG_04688","SJAG_01702","SJAG_03692","SJAG_02290","SJAG_04425","SJAG_03141","SJAG_03152","SJAG_04042","SJAG_03306","SJAG_00432","SJAG_04549","SJAG_03712","SJAG_00502","SJAG_04459","SJAG_02689","SJAG_02388","SJAG_00309","SJAG_04953","SJAG_00395","SJAG_03102","SJAG_03671","SJAG_03614","SJAG_04305","SJAG_01630","SJAG_00419","SJAG_01574","SJAG_03881","SJAG_01955","SJAG_02832","SJAG_00714","SJAG_01466","SJAG_02972","SJAG_00881","SJAG_03312","SJAG_01061","SJAG_01404","SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106202,65498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[105916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[106919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[76341,106920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[97428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[95955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[98844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[90944,95293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[107527,75610,77730,78495,76985,76423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[88086,94339,102201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[91720,75282,70078,75541,108531,92041,74194,76212,96488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[110806,72981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"},{"annotations":[77527,101197,107074,71581,70629,110562,73814,74954,75310,75089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[105798,107075,67635,74955,75849,101198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_00432":null,"SJAG_00502":null,"SJAG_00714":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01061":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01702":null,"SJAG_01955":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02388":null,"SJAG_02689":null,"SJAG_02832":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03692":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04305":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04549":null,"SJAG_04688":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"aspartate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aspartate family amino acid anabolism","type":"exact"},{"name":"aspartate family amino acid biosynthesis","type":"exact"},{"name":"aspartate family amino acid formation","type":"exact"},{"name":"aspartate family amino acid synthesis","type":"exact"}],"termid":"GO:0009067","terms_by_termid":{"GO:0006529":null,"GO:0006532":null,"GO:0009086":null,"GO:0009088":null,"GO:0009089":null,"GO:0019266":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019284":null,"GO:0019509":null,"GO:0019878":null,"GO:0070981":null,"GO:0071266":null,"GO:1990355":null}}


id: PR:P87159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inhibitor nif1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.04c","synonyms":[{"name":"Spom972h-nif1","type":"exact"},{"name":"nim1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87159"}


id: PBO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U24b (predicted)","termid":"PBO:0001553"}


id: GO:1990943
data:
  {"annotated_genes":["SJAG_00073"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88770],"is_not":false,"summary":null,"term":"GO:1990943"}]},"cv_name":"molecular_function","definition":"Binding to the replication fork barrier found in the mating type region of fission yeast.","definition_xrefs":["PMID:18723894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork barrier binding","termid":"GO:0031634"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"mating type region replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RTS1 barrier binding","type":"exact"},{"name":"RTS1 element binding","type":"exact"}],"termid":"GO:1990943","terms_by_termid":{"GO:1990943":null}}


id: GO:0021818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The changes in the actin cytoskeleton that are necessary for the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","PMID:12626695","GOC:cls","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of the microfilament cytoskeleton involved in cell locomotion in cerebral cortex radial glia guided migration (obsolete GO:0021818)","synonyms":[{"name":"modulation of the microfilament cytoskeleton involved in cell locomotion in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021818"}


id: PBO:0035847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0035847"}


id: PBO:0086788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy","termid":"PBO:0086788"}


id: PBO:0041522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 74","termid":"PBO:0041522"}


id: GO:1905181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of urease activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:16244137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urease activity","synonyms":[{"name":"regulation of urea amidohydrolase activity","type":"exact"}],"termid":"GO:1905181"}


id: GO:0002548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a monocyte in response to an external stimulus.","definition_xrefs":["PMID:11696603","PMID:15173832","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte chemotaxis","termid":"GO:0002548"}


id: PBO:0052955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KxDL motif containing 1","termid":"PBO:0052955"}


id: PBO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4 like","termid":"PBO:0044683"}


id: SO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one V-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_J_cluster","synonyms":[{"name":"V J cluster","type":"exact"},{"name":"V-J-CLUSTER","type":"exact"}],"termid":"SO:0000534"}


id: PBO:0043950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B2","termid":"PBO:0043950"}


id: PBO:0042212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin K","termid":"PBO:0042212"}


id: PBO:0081065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CW-type and PWWP domain containing 2","termid":"PBO:0081065"}


id: PBO:0084747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial lysine-tRNA synthetase; required for import of both aminoacylated and deacylated forms of tRNA(Lys) into mitochondria and for aminoacylation of mitochondrially encoded tRNA(Lys)","termid":"PBO:0084747"}


id: PBO:0053917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1214","termid":"PBO:0053917"}


id: GO:0045183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A translation regulator activity that does not involve binding to nucleic acids.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulator activity","termid":"GO:0045182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0045182"],"is_obsolete":false,"name":"translation factor activity, non-nucleic acid binding","termid":"GO:0045183"}


id: PBO:0002762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not3/5 (predicted)","termid":"PBO:0002762"}


id: PR:Q10261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56F8.13 gene.","definition_xrefs":["UniProtKB:Q10261","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C56F8.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.13","synonyms":[{"name":"Spom972h-SPAC56F8.13","type":"exact"}],"termid":"PR:Q10261"}


id: GO:0097438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["PO_REF:00009","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from dormancy","synonyms":[{"name":"release from dormancy","type":"exact"}],"termid":"GO:0097438"}


id: GO:0047578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-glutamate + 2-oxoglutarate = 4-hydroxy-2-oxoglutarate + L-glutamate.","definition_xrefs":["MetaCyc:4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN","EC:2.6.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"4-hydroxyglutamate transaminase activity","secondary_identifiers":["Reactome:R-HSA-6784393","RHEA:10480"],"synonyms":[{"name":"4-hydroxy-L-glutamate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"4-hydroxyglutamate aminotransferase activity","type":"exact"}],"termid":"GO:0047578"}


id: MOD:00608
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin polyethyleneoxide amine","synonyms":[{"name":"Biotin polyethyleneoxide amine","type":"related"},{"name":"Biotin-PEO-Amine","type":"related"}],"termid":"MOD:00608"}


id: PBO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.5.1","termid":"PBO:0000953"}


id: PBO:0040652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBSome interacting protein 1 pseudogene 1","termid":"PBO:0040652"}


id: PBO:0027717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0027717"}


id: PBO:0079769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 2","termid":"PBO:0079769"}


id: PR:Q9USJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L7/L12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04575","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.09c","secondary_identifiers":["UniProtKB:Q9USJ9"],"synonyms":[{"name":"Spom972h-rplL","type":"exact"},{"name":"mitochondrial-nucleoid protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ9"}


id: GO:0052923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + 7 isopentenyl diphosphate = 7 diphosphate + all-trans-nonaprenyl diphosphate.","definition_xrefs":["RHEA:27563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R07267","MetaCyc:TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN","EC:2.5.1.84","KEGG_REACTION:R09250","GO:0050347"],"synonyms":[{"name":"(E)-octaprenyl-diphosphate:isopentenyl-diphosphate octaprenyltranstransferase activity","type":"related"},{"name":"SPP synthase activity","type":"broad"},{"name":"SPP-synthase activity","type":"broad"},{"name":"all-trans-nonaprenyl-diphosphate synthase activity","type":"related"},{"name":"nonaprenyl diphosphate synthase activity","type":"broad"},{"name":"nonaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"polyprenylpyrophosphate synthetase activity","type":"related"},{"name":"solPP synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthetase activity","type":"broad"},{"name":"solanesyl pyrophosphate synthetase activity","type":"related"},{"name":"solanesyl-diphosphate synthase activity","type":"related"},{"name":"terpenoidallyltransferase activity","type":"related"},{"name":"terpenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-octaprenyltranstransferase activity","type":"related"},{"name":"trans-prenyltransferase activity","type":"related"}],"termid":"GO:0052923"}


id: PR:Q9UT35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ectonucleoside triphosphate diphosphohydrolase 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine-diphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.08","secondary_identifiers":["UniProtKB:Q9UT35"],"synonyms":[{"name":"GDPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ENTPD6","type":"exact"}],"termid":"PR:Q9UT35"}


id: PBO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily M member 2B","termid":"PBO:0062179"}


id: GO:0043749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + MgATP + H2O = phenylphosphate + MgAMP + orthophosphate.","definition_xrefs":["PMID:15547277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenol, water dikinase activity","secondary_identifiers":["EC:2.7.9.-"],"synonyms":[{"name":"ATP:phenol:water phosphotransferase activity","type":"exact"},{"name":"phenol:water dikinase activity","type":"exact"},{"name":"phenylphosphate synthase activity","type":"exact"}],"termid":"GO:0043749"}


id: GO:0050082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: maltose + phosphate = D-glucose + beta-D-glucose 1-phosphate.","definition_xrefs":["MetaCyc:MALTOSE-PHOSPHORYLASE-RXN","EC:2.4.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"maltose phosphorylase activity","secondary_identifiers":["RHEA:21116"],"synonyms":[{"name":"maltose:phosphate 1-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050082"}


id: PBO:0071024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 26","termid":"PBO:0071024"}


id: GO:1990812
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin, stiff protrusion extended by the leading edge of an axonal or dendritic growth cone.","definition_xrefs":["PMID:25598228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium","termid":"GO:0030175"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone filopodium","termid":"GO:1990812"}


id: GO:0009118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of nucleoside metabolic process","synonyms":[{"name":"regulation of nucleoside metabolism","type":"exact"}],"termid":"GO:0009118"}


id: PBO:0052742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 34","termid":"PBO:0052742"}


id: GO:0046348
data:
  {"annotated_genes":["SJAG_03013","SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96796,87215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino sugar, sugars containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino sugar catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino sugar breakdown","type":"exact"},{"name":"amino sugar catabolism","type":"exact"},{"name":"amino sugar degradation","type":"exact"},{"name":"aminosaccharide catabolic process","type":"exact"},{"name":"aminosaccharide catabolism","type":"exact"}],"termid":"GO:0046348","terms_by_termid":{"GO:0034232":null}}


id: PBO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4C","termid":"PBO:0043034"}


id: PBO:0061935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 8","termid":"PBO:0061935"}


id: GO:0046207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trypanothione (N1,N6,-bis(glutathionyl)spermidine), an essential redox intermediate in intracellular thiol redox regulation which also plays a role in protecting against oxidative stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanothione metabolic process","termid":"GO:0046206"},{"relation_name":"is_a","term_name":"glutathione derivative catabolic process","termid":"GO:1901686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"trypanothione catabolic process","synonyms":[{"name":"trypanothione breakdown","type":"exact"},{"name":"trypanothione catabolism","type":"exact"},{"name":"trypanothione degradation","type":"exact"}],"termid":"GO:0046207"}


id: PBO:0042017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 74A","termid":"PBO:0042017"}


id: GO:1990174
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87152],"is_not":false,"summary":null,"term":"GO:1990174"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of the cap from an unmethylated 5'-end capped RNA resulting in the release of the entire cap structure (GpppN) and a 5' monophosphorylated RNA.","definition_xrefs":["GOC:dgf","PMID:20802481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphodiesterase decapping endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G(5')pppN pyrophosphatase activity","type":"related"}],"termid":"GO:1990174","terms_by_termid":{"GO:1990174":null}}


id: GO:0080029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of boron-containing substances.","definition_xrefs":["PMID:18952773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to boron-containing substance","termid":"GO:0010036"},{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to boron-containing substance levels","synonyms":[{"name":"cellular response to boron levels","type":"exact"}],"termid":"GO:0080029"}


id: GO:1990940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of one microtubule along another microtubule involved in mitotic spindle elongation.","definition_xrefs":["PMID:19686686"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule sliding involved in mitotic spindle elongation (obsolete GO:1990940)","termid":"GO:1990940"}


id: SO:1000106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000106 mutation_causing_inframe_polypeptide_N_terminal_elongation (obsolete SO:1000106)","synonyms":[{"name":"inframe polypeptide N-terminal elongation","type":"exact"},{"name":"mutation causing inframe polypeptide N terminal elongation","type":"exact"}],"termid":"SO:1000106"}


id: PBO:0038360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transports","termid":"PBO:0038360"}


id: GO:0042187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-xylene (1,4-dimethylbenzene), a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"p-xylene metabolic process","termid":"GO:0018951"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"p-xylene catabolic process","synonyms":[{"name":"p-xylene breakdown","type":"exact"},{"name":"p-xylene catabolism","type":"exact"},{"name":"p-xylene degradation","type":"exact"},{"name":"para-xylene catabolic process","type":"exact"},{"name":"para-xylene catabolism","type":"exact"}],"termid":"GO:0042187"}


id: PBO:0059227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 8","termid":"PBO:0059227"}


id: PBO:0039977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5A","termid":"PBO:0039977"}


id: PBO:0090651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa3","termid":"PBO:0090651"}


id: PBO:0064805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A pseudogene 2","termid":"PBO:0064805"}


id: GO:0051524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell switches from bipolar cell growth to monopolar cell growth.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of monopolar cell polarity","termid":"GO:0061162"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"cell growth mode switching, bipolar to monopolar","termid":"GO:0051524"}


id: FYPO:0006986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled up to, but not beyond, the IRL boundary element in the silent mating-type cassette, as in wild type.","definition_xrefs":["PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal spatial extent of heterochromatin assembly to boundary element IRL","synonyms":[{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL at silent mating type locus","type":"exact"},{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL during vegetative growth","type":"exact"}],"termid":"FYPO:0006986"}


id: GO:0010878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cholesterol storage","synonyms":[{"name":"cholesterol sequestration","type":"narrow"},{"name":"sequestration of cholesterol","type":"narrow"}],"termid":"GO:0010878"}


id: PBO:0074767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3A","termid":"PBO:0074767"}


id: GO:1990090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.","definition_xrefs":["PMID:22399805","Wikipedia:Nerve_growth_factor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to nerve growth factor","termid":"GO:1990089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nerve growth factor stimulus","synonyms":[{"name":"cellular response to NGF","type":"exact"}],"termid":"GO:1990090"}


id: PBO:0081874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 816","termid":"PBO:0081874"}


id: PBO:0012004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24/Pet20 (predicted)","termid":"PBO:0012004"}


id: PBO:0069357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 617, pseudogene","termid":"PBO:0069357"}


id: PBO:0078728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 3-2","termid":"PBO:0078728"}


id: GO:0098956
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the dense core granule membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of dense core granule membrane (obsolete GO:0098956)","synonyms":[{"name":"intrinsic to dense core granule membrane","type":"exact"}],"termid":"GO:0098956"}


id: GO:0032658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-15 production","secondary_identifiers":["GO:0045372"],"synonyms":[{"name":"regulation of IL-15 production","type":"exact"},{"name":"regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032658"}


id: PBO:0071839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 34","termid":"PBO:0071839"}


id: PBO:0031137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_microtubules","termid":"PBO:0031137"}


id: GO:0034061
data:
  {"annotated_genes":["SJAG_00814","SJAG_04089","SJAG_05197","SJAG_02658","SJAG_02908","SJAG_04791","SJAG_05239","SJAG_03906","SJAG_00153","SJAG_05979","SJAG_02818","SJAG_16460","SJAG_00611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75717,72723,91257,98086,94628,73936,98135,73509,74260,92784,76644,70421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003887"},{"annotations":[70603],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0003721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a nucleic acid template and a 3'hydroxyl group.","definition_xrefs":["GOC:mah","EC:2.7.7.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04791":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05979":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016779","GO:0140097"],"is_obsolete":false,"name":"DNA polymerase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA nucleotidyltransferase activity","type":"related"},{"name":"deoxynucleate polymerase activity","type":"related"},{"name":"deoxyribonucleate nucleotidyltransferase activity","type":"related"},{"name":"deoxyribonucleic acid polymerase activity","type":"related"},{"name":"deoxyribonucleic polymerase activity","type":"related"}],"termid":"GO:0034061","terms_by_termid":{"GO:0003721":null,"GO:0003887":null}}


id: PBO:0040947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 18","termid":"PBO:0040947"}


id: MOD:01051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-nitrobenzoyl","synonyms":[{"name":"NBz","type":"exact"}],"termid":"MOD:01051"}


id: PBO:0078922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-1","termid":"PBO:0078922"}


id: FYPO:0000796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased glycerol dehydrogenase activity","termid":"FYPO:0000796"}


id: PBO:0077417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 151B","termid":"PBO:0077417"}


id: GO:1903321
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein modification by small protein conjugation or removal.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-translational protein modification","termid":"GO:1901874"},{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"negatively_regulates","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein modification by small protein conjugation or removal","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"down regulation of protein modification by small protein conjugation or removal","type":"exact"},{"name":"down-regulation of protein modification by small protein conjugation or removal","type":"exact"},{"name":"downregulation of protein modification by small protein conjugation or removal","type":"exact"},{"name":"inhibition of protein modification by small protein conjugation or removal","type":"narrow"}],"termid":"GO:1903321","terms_by_termid":{"GO:0033234":null}}


id: PBO:0057544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 660","termid":"PBO:0057544"}


id: PBO:0031414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G2/M_transition_delay","termid":"PBO:0031414"}


id: PBO:0091189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 8","termid":"PBO:0091189"}


id: PBO:0063645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 2","termid":"PBO:0063645"}


id: PBO:0031818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_autophagy","termid":"PBO:0031818"}


id: GO:0006407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of rRNA from the nucleus to the cytoplasm; the rRNA is usually in the form of ribonucleoproteins.","definition_xrefs":["GOC:mah","GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete rRNA export from nucleus (obsolete GO:0006407)","synonyms":[{"name":"rRNA export from cell nucleus","type":"exact"},{"name":"rRNA export out of nucleus","type":"exact"},{"name":"rRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"rRNA-nucleus export","type":"exact"}],"termid":"GO:0006407"}


id: GO:0046419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving octopine, (N-(1-carboxy-4-guanidinobutyl)-L-alanine), an amino acid derived opine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"octopine metabolic process","synonyms":[{"name":"octopine metabolism","type":"exact"}],"termid":"GO:0046419"}


id: PBO:0065353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 3","termid":"PBO:0065353"}


id: GO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring during the process of replicative cell aging as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species involved in replicative cell aging (obsolete GO:0001316)","synonyms":[{"name":"age-dependent response to AOS during replicative cell aging","type":"exact"},{"name":"age-dependent response to ROI during replicative cell aging","type":"related"},{"name":"age-dependent response to ROS during replicative cell aging","type":"related"},{"name":"age-dependent response to active oxygen species during replicative cell aging","type":"related"},{"name":"age-dependent response to reactive oxidative species during replicative cell aging","type":"exact"},{"name":"age-dependent response to reactive oxygen intermediate during replicative cell aging","type":"related"},{"name":"age-dependent response to reactive oxygen species during replicative cell ageing","type":"exact"},{"name":"age-dependent response to reactive oxygen species during replicative cell aging","type":"related"}],"termid":"GO:0001316"}


id: PR:P41410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair and recombination protein RAD54-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.03c","secondary_identifiers":["UniProtKB:P41410"],"synonyms":[{"name":"RAD54 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RAD54L","type":"exact"}],"termid":"PR:P41410"}


id: PBO:0078011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 1 (non-functional)","termid":"PBO:0078011"}


id: GO:0019601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 2-hydroxytoluene (o-cresol).","definition_xrefs":["MetaCyc:TOLUENE-DEG-2-OH-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via 2-hydroxytoluene","termid":"GO:0019601"}


id: CL:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.","definition_xrefs":["CARO:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell","termid":"CL:0000000"}


id: PATO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000723 high yield (obsolete PATO:0000723)","termid":"PATO:0000723"}


id: FYPO:0001392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of vegetative cell growth is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal regulation of cell growth","synonyms":[{"name":"abnormal regulation of vegetative cell growth","type":"exact"}],"termid":"FYPO:0001392"}


id: GO:0018634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene + NADH + H+ + O2 = NAD+ + H2O + alpha-pinene oxide.","definition_xrefs":["RHEA:32891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"alpha-pinene monooxygenase [NADH] activity","secondary_identifiers":["EC:1.14.13.155","UM-BBD_reactionID:r0742"],"termid":"GO:0018634"}


id: PBO:0017918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug166","termid":"PBO:0017918"}


id: PBO:0077674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 21","termid":"PBO:0077674"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: PBO:0080404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 endosomal protein sorting factor like","termid":"PBO:0080404"}


id: PBO:0034349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derived_by_descent_from","termid":"PBO:0034349"}


id: PATO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Cyclic cyclicity inheres in a molecule when the atoms of the molecule do contain at least one cycle in the atom-atom connection paths (through bonds).","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclicity","termid":"PATO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic cyclicity","termid":"PATO:0002184"}


id: PATO:0000844
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000844 auditory acuity (obsolete PATO:0000844)","termid":"PATO:0000844"}


id: PBO:0034405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_occurs_in","termid":"PBO:0034405"}


id: PBO:0048350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 61","termid":"PBO:0048350"}


id: PBO:0047028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 91 member A3, pseudogene","termid":"PBO:0047028"}


id: FYPO:0001862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost due to abnormal meiotic chromosome segregation at a higher frequency than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during meiotic cell cycle","termid":"FYPO:0001860"},{"relation_name":"output_of","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased minichromosome loss upon segregation during meiotic cell cycle","synonyms":[{"name":"increased plasmid loss upon segregation during meiosis","type":"related"},{"name":"meiotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001862"}


id: GO:0021896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte residing in the forebrain. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["PMID:16226447","GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte differentiation","termid":"GO:0048708"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte differentiation","termid":"GO:0021896"}


id: GO:0010956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is the catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vitamin D biosynthetic process","termid":"GO:0010957"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"negative regulation of monooxygenase activity","termid":"GO:0032769"},{"relation_name":"is_a","term_name":"regulation of calcidiol 1-monooxygenase activity","termid":"GO:0060558"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcidiol 1-monooxygenase activity","termid":"GO:0010956"}


id: PBO:0072726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ryanodine receptor 1","termid":"PBO:0072726"}


id: GO:0052851
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107886],"is_not":false,"summary":null,"term":"GO:0052851"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe3+-siderophore + NADP+ + H+ -> 2 Fe2+-siderophore + NADPH.","definition_xrefs":["RHEA:28795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-chelate reductase activity","termid":"GO:0000293"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ferric-chelate reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-6555","EC:1.16.1.9","KEGG_REACTION:R09541"],"synonyms":[{"name":"ferric chelate reductase activity","type":"broad"},{"name":"ferric reductase, NADPH-dependent activity","type":"exact"},{"name":"iron chelate reductase activity","type":"broad"}],"termid":"GO:0052851","terms_by_termid":{"GO:0052851":null}}


id: GO:0047244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP-N-acetyl-D-mannosamine = N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP.","definition_xrefs":["MetaCyc:2.4.1.187-RXN","EC:2.4.1.187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity","secondary_identifiers":["MetaCyc:TEICHOICSYN2-RXN","RHEA:16053"],"synonyms":[{"name":"N-acetylmannosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-mannosamine:N-acetyl-beta-D-glucosaminyldiphosphoundecaprenol beta-1,4-N-acetylmannosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylmannosamine:N-acetylglucosaminyl diphosphorylundecaprenol N-acetylmannosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetyl-mannosamineacetylglucosaminylpyrophosphorylundecaprenol acetylmannosaminyltransferase activity","type":"related"}],"termid":"GO:0047244"}


id: PBO:0077759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 1","termid":"PBO:0077759"}


id: GO:0102085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + L-glutamate + ATP = H+ + p-aminobenzoyl glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"N-(4-aminobenzoyl)-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10884"],"termid":"GO:0102085"}


id: PR:Q9UTJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein RAD50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad50 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.01c","secondary_identifiers":["UniProtKB:Q9UTJ8"],"synonyms":[{"name":"Spom972h-RAD50","type":"exact"}],"termid":"PR:Q9UTJ8"}


id: GO:0071751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polymeric IgA immunoglobulin complex that is complexed with one chain of secretory component (SC). Polymeric IgA is present in mucosal areas, having been transported via a transcytosis mechanism in mucosal epithelial cells relying on the polymeric Ig receptor, a portion of which then remains bound to the polymeric IgA as secretory component.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:16362985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric IgA immunoglobulin complex","termid":"GO:0071749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"secretory IgA immunoglobulin complex","synonyms":[{"name":"sIgA antibody","type":"exact"},{"name":"sIgA1 antibody","type":"narrow"},{"name":"secretory IgA antibody","type":"exact"}],"termid":"GO:0071751"}


id: GO:0140889
data:
  {"annotated_genes":["SJAG_01204"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104480],"is_not":false,"summary":null,"term":"GO:0140889"}]},"cv_name":"biological_process","definition":"The disruption of nucleosomes during DNA replication to allow the replication machinery to access the DNA.","definition_xrefs":["PMID:34471130","PMID:35308047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA replication-dependent chromatin disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140889","terms_by_termid":{"GO:0140889":null}}


id: PBO:0082887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with Pho85p cyclin-dependent kinase (Cdk) to phosphorylate and regulate glycogen synthase, also activates Pho85p for Glc8p phosphorylation; PCL8 has a paralog, PCL10, that arose from the whole genome duplication","termid":"PBO:0082887"}


id: PBO:0048628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric inhibitory polypeptide receptor","termid":"PBO:0048628"}


id: PR:Q04665
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein G(z) subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein alpha-2 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.13c","secondary_identifiers":["UniProtKB:Q04665"],"synonyms":[{"name":"GP2-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GNAZ","type":"exact"}],"termid":"PR:Q04665"}


id: GO:0010406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cell wall arabinogalactan II glycoprotein, which is composed of a group of core protein containing Hyp, Ala, Ser, Thr and Gly as the major amino acid constituents, and the C-terminus is GPI anchored.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinogalactan protein metabolic process","termid":"GO:0010405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"classical arabinogalactan protein metabolic process","synonyms":[{"name":"classical-arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010406"}


id: PATO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's lacking sharp straight-edged teeth pointing to the apex.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unserrated","termid":"PATO:0001975"}


id: GO:0008759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of an acetyl group from the 2-N position of glucosamine in the lipid A precursor UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine.","definition_xrefs":["PMID:10026271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787","GO:0019213"],"is_obsolete":false,"name":"UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity","secondary_identifiers":["EC:3.5.1.108"],"termid":"GO:0008759"}


id: PBO:0089826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor-like protein","termid":"PBO:0089826"}


id: PBO:0049327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 1","termid":"PBO:0049327"}


id: PBO:0089758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp5","termid":"PBO:0089758"}


id: PBO:0029765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_double-strand_break_site","termid":"PBO:0029765"}


id: GO:0075285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of multicellular or syncytial spore via septations derived from meiosis. A multicellular or syncytial spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation","termid":"GO:0034293"},{"relation_name":"is_a","term_name":"sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"sexual sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075285"}


id: PBO:0064382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 4","termid":"PBO:0064382"}


id: GO:0070378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of ERK5 cascade","termid":"GO:0070376"},{"relation_name":"positively_regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ERK5 cascade","synonyms":[{"name":"activation of BMK cascade","type":"narrow"},{"name":"positive regulation of BMK cascade","type":"exact"},{"name":"positive regulation of BMK signaling pathway","type":"exact"},{"name":"positive regulation of BMK signalling pathway","type":"exact"},{"name":"positive regulation of BMK1 cascade","type":"exact"},{"name":"positive regulation of ERK5 signaling pathway","type":"exact"},{"name":"positive regulation of MAPK7 cascade","type":"exact"},{"name":"stimulation of BMK cascade","type":"narrow"},{"name":"up regulation of BMK cascade","type":"exact"},{"name":"up-regulation of BMK cascade","type":"exact"},{"name":"upregulation of BMK cascade","type":"exact"}],"termid":"GO:0070378"}


id: GO:0033125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of GTP catabolic process (obsolete GO:0033125)","synonyms":[{"name":"negative regulation of GTP breakdown","type":"exact"},{"name":"negative regulation of GTP catabolism","type":"exact"},{"name":"negative regulation of GTP degradation","type":"exact"}],"termid":"GO:0033125"}


id: PBO:0075794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 12","termid":"PBO:0075794"}


id: PBO:0060550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)HX epimerase","termid":"PBO:0060550"}


id: PBO:0068793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 30, pseudogene","termid":"PBO:0068793"}


id: GO:0000792
data:
  {"annotated_genes":["SJAG_00961","SJAG_02697","SJAG_02927","SJAG_03942","SJAG_01332","SJAG_03346","SJAG_01745","SJAG_02119","SJAG_01579","SJAG_04186","SJAG_04030","SJAG_01075","SJAG_00934","SJAG_04670","SJAG_03356","SJAG_02846","SJAG_03745","SJAG_00796","SJAG_00768","SJAG_02990","SJAG_03916","SJAG_03989","SJAG_03685","SJAG_00678","SJAG_00302","SJAG_02622","SJAG_04508","SJAG_03042","SJAG_02773","SJAG_04855","SJAG_01067","SJAG_03789","SJAG_00266","SJAG_00698","SJAG_03350","SJAG_04412","SJAG_00414","SJAG_04062","SJAG_04141","SJAG_03543","SJAG_01056","SJAG_02866","SJAG_04768","SJAG_02082","SJAG_01601","SJAG_03635","SJAG_03689","SJAG_00756","SJAG_01873","SJAG_00335","SJAG_04252","SJAG_00471","SJAG_04574","SJAG_04623","SJAG_01581","SJAG_03982","SJAG_03449","SJAG_02621","SJAG_01495","SJAG_02409","SJAG_05329","SJAG_03844","SJAG_03780","SJAG_04257","SJAG_02698","SJAG_01867","SJAG_02382","SJAG_04039","SJAG_03418","SJAG_04142","SJAG_03664","SJAG_02778","SJAG_05372","SJAG_03926","SJAG_01540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84320,84600,90004,91571,94799,99364,100585,103148,106984,109604,109632,112170,114247],"is_not":false,"summary":null,"term":"GO:0000792"},{"annotations":[114252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990343"},{"annotations":[108365,86727,87304,91600,87667,94437,113745,112727,113050,86267,88859,113064,111867,83061,107203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990342"},{"annotations":[99341,85550,107204,83496,71249,83435,92346,99434,107685,112672,112681,87229,107686,105607,108143,109482,112728,113501,113746,86395,86728,94438,103334,94852,108366,107684,89240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031934"},{"annotations":[87232,103007,86863,92089,87507,83218,89242,99343,94440,94902,101743,107207,86398,94855,107698,108368,99437,108751,108311,109484,107697,113631,87813,107696,113748,111009,105609,94283,102511,84882,106317,111870,89495,86730,97104,83438,86797,103336,109350,85553,101499,112730,98033,112684,108145,113503,112674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005721"},{"annotations":[106324,87233,103337,108369,107608,111546,97535,85554,99438,109485,111871,87308,101500,107208,71250,112685,86798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033553"},{"annotations":[113051,86731,107309],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030958"},{"annotations":[107210,86732,94441,86399,89243,112731,107701,105610,110969,94856,87510,108371,99440,99344,107699,107700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"A compact and highly condensed form of chromatin that is refractory to transcription.","definition_xrefs":["PMID:32017156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00471":null,"SJAG_00678":null,"SJAG_00698":null,"SJAG_00756":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01056":null,"SJAG_01067":null,"SJAG_01075":null,"SJAG_01332":null,"SJAG_01495":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01581":null,"SJAG_01601":null,"SJAG_01745":null,"SJAG_01867":null,"SJAG_01873":null,"SJAG_02082":null,"SJAG_02119":null,"SJAG_02382":null,"SJAG_02409":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02697":null,"SJAG_02698":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_02866":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03042":null,"SJAG_03346":null,"SJAG_03350":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03449":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03685":null,"SJAG_03689":null,"SJAG_03745":null,"SJAG_03780":null,"SJAG_03789":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03982":null,"SJAG_03989":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04062":null,"SJAG_04141":null,"SJAG_04142":null,"SJAG_04186":null,"SJAG_04252":null,"SJAG_04257":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04574":null,"SJAG_04623":null,"SJAG_04670":null,"SJAG_04768":null,"SJAG_04855":null,"SJAG_05329":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"heterochromatin","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["GO:0005720","NIF_Subcellular:sao581845896","Wikipedia:Heterochromatin","GO:0035328"],"synonyms":[{"name":"nuclear heterochromatin","type":"narrow"},{"name":"transcriptionally inactive chromatin","type":"exact"},{"name":"transcriptionally silent chromatin","type":"exact"}],"termid":"GO:0000792","terms_by_termid":{"GO:0000792":null,"GO:0005721":null,"GO:0030958":null,"GO:0031934":null,"GO:0033553":null,"GO:0140720":null,"GO:1990342":null,"GO:1990343":null}}


id: PBO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog (predicted)","termid":"PBO:0000488"}


id: PBO:0073399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 2","termid":"PBO:0073399"}


id: GO:0016413
data:
  {"annotated_genes":["SJAG_05413","SJAG_02654","SJAG_00395","SJAG_03305","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69941,70471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016287"},{"annotations":[75122,75088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004414"},{"annotations":[75087,86712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_02654":null,"SJAG_03305":null,"SJAG_04305":null,"SJAG_05413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016413","terms_by_termid":{"GO:0004414":null,"GO:0009001":null,"GO:0016287":null}}


id: GO:0009321
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex, usually a homodimer, which directly reduces cellular levels of organic hydroperoxides.","definition_xrefs":["GOC:jl","PMID:2649484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"alkyl hydroperoxide reductase complex","termid":"GO:0009321"}


id: GO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell activation","termid":"GO:0030101"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation","synonyms":[{"name":"NK cell proliferation","type":"exact"}],"termid":"GO:0001787"}


id: GO:0050245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + quercitrin = L-rhamnose + quercetin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete quercitrinase activity (obsolete GO:0050245)","termid":"GO:0050245"}


id: GO:0140398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: versicolorin B + NADPH + O2 = versicolorin A + NADP+ + 2 H2O. Uses heme-thiolate as a co-factor. Involved in the synthesis of aflatoxins in the fungus Aspergillus parasiticus.","definition_xrefs":["PMID:15006741","PMID:8368837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"versicolorin B desaturase activity","secondary_identifiers":["KEGG_REACTION:R10479","RHEA:35743","MetaCyc:RXN-9495"],"termid":"GO:0140398"}


id: PBO:0064257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A5","termid":"PBO:0064257"}


id: GO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:add","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure homeostasis","termid":"GO:0060249"},{"relation_name":"part_of","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue homeostasis","synonyms":[{"name":"tissue maintenance","type":"narrow"}],"termid":"GO:0001894"}


id: PBO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NAD+ transporter (predicted)","termid":"PBO:0000408"}


id: PBO:0039299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG13 UDP-N-acetylglucosaminyltransferase subunit","termid":"PBO:0039299"}


id: GO:0042487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","PMID:15355794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of odontogenesis","termid":"GO:0042481"},{"relation_name":"regulates","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of odontogenesis of dentin-containing tooth","synonyms":[{"name":"regulation of odontogenesis of dentine-containing teeth","type":"exact"},{"name":"regulation of odontogenesis of dentine-containing tooth","type":"exact"}],"termid":"GO:0042487"}


id: PBO:0071898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 36","termid":"PBO:0071898"}


id: PBO:0004641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin family U3 and U14 snoRNA associated protein (predicted)","termid":"PBO:0004641"}


id: GO:0072339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactam biosynthetic process","synonyms":[{"name":"cellular lactam anabolism","type":"exact"},{"name":"cellular lactam biosynthesis","type":"exact"},{"name":"cellular lactam biosynthetic process","type":"exact"},{"name":"cellular lactam formation","type":"exact"},{"name":"cellular lactam synthesis","type":"exact"}],"termid":"GO:0072339"}


id: PR:Q10260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56F8.12 gene.","definition_xrefs":["UniProtKB:Q10260","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C56F8.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.12","synonyms":[{"name":"Spom972h-SPAC56F8.12","type":"exact"}],"termid":"PR:Q10260"}


id: PBO:0074856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 44","termid":"PBO:0074856"}


id: GO:1990980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of copper ions passing through the blood-cerebrospinal fluid barrier.","definition_xrefs":["PMID:24614235"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transport across blood-CSF barrier (obsolete GO:1990980)","synonyms":[{"name":"copper ion transport across BCB","type":"exact"},{"name":"copper ion transport across blood-cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:1990980"}


id: PBO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-2","termid":"PBO:0004772"}


id: RO:HOM0000045
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is characterized by topological discordance between a gene tree and a species tree attributable to the phylogenetic sorting of genetic polymorphisms across successive nodes in a species tree.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_hemiplasy_relationship_with","synonyms":[{"name":"hemiplasous to","type":"exact"}],"termid":"RO:HOM0000045"}


id: GO:0097214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["PMID:20544854","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal membrane permeability","termid":"GO:0097213"},{"relation_name":"is_a","term_name":"positive regulation of membrane permeability","termid":"GO:1905710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of lysosomal membrane permeability","synonyms":[{"name":"positive regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097214"}


id: PBO:0030634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_pH","termid":"PBO:0030634"}


id: PBO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse transcriptional regulator, HCNGP-like (predicted)","termid":"PBO:0001245"}


id: FYECO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an experiment was performed in diploid cells.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000203 diploid cells (obsolete FYECO:0000203)","synonyms":[{"name":"2N cells","type":"exact"}],"termid":"FYECO:0000203"}


id: SO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Consensus region of primary transcript bordering junction of splicing. A region that overlaps exactly 2 base and adjacent_to splice_junction.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Splice_site"],"synonyms":[{"name":"splice site","type":"exact"}],"termid":"SO:0000162"}


id: PATO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature","termid":"PATO:0001701"}


id: FYPO:0003507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on zinc","synonyms":[{"name":"normal cell population growth in presence of zinc","type":"exact"},{"name":"normal cell population growth on zinc","type":"exact"},{"name":"normal cell population growth on zinc ion","type":"exact"},{"name":"normal cellular response to zinc","type":"related"},{"name":"normal growth on zinc ions","type":"exact"},{"name":"normal vegetative cell population growth on zinc","type":"exact"}],"termid":"FYPO:0003507"}


id: SO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a serine anticodon, and a 3' serine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"serine_tRNA_primary_transcript","termid":"SO:0000226"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl_tRNA","synonyms":[{"name":"seryl tRNA","type":"exact"},{"name":"seryl-transfer RNA","type":"exact"},{"name":"seryl-transfer ribonucleic acid","type":"related"}],"termid":"SO:0000269"}


id: GO:0010413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylan, a polymer containing a beta-(1->4)-linked D-xylose backbone decorated with glucuronic acid side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucuronoxylan metabolic process","synonyms":[{"name":"glucuronoxylan metabolism","type":"exact"}],"termid":"GO:0010413"}


id: PBO:0088526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific disordered protein","termid":"PBO:0088526"}


id: PBO:0066566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHBDF1 pseudogene 1","termid":"PBO:0066566"}


id: GO:0039696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription process that uses viral RNA as a template.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-templated viral transcription","termid":"GO:0039696"}


id: PBO:0075019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-30","termid":"PBO:0075019"}


id: PBO:0048727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolipid transfer protein","termid":"PBO:0048727"}


id: GO:0102803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thebaine + 2-oxoglutarate + O2 = oripavine + formaldehyde + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.32","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thebane O-demethylase activity","secondary_identifiers":["MetaCyc:RXN-8149"],"termid":"GO:0102803"}


id: PBO:0056226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E2","termid":"PBO:0056226"}


id: GO:0022879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + trehalose(out) = protein histidine + trehalose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0003824","GO:0005215","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-trehalose phosphotransferase system transporter activity","synonyms":[{"name":"trehalose PTS transporter activity","type":"exact"}],"termid":"GO:0022879"}


id: PBO:0090670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CH-OH group oxidoreductase, human RTN4IP1 ortholog, implicated in mitochondrial organization or tethering","termid":"PBO:0090670"}


id: GO:0072356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a chromosome passenger complex; as a result, the complex is transported to, or maintained in, a specific location at the kinetochore. A chromosome passenger complex is a protein complex that contains the BIR-domain-containing protein Survivin, Aurora B kinase, INCENP and Borealin, and coordinates various events based on its location to different structures during the course of mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chromosome passenger complex localization to kinetochore","synonyms":[{"name":"CPC complex localization to kinetochore","type":"exact"},{"name":"CPC localization to kinetochore","type":"exact"},{"name":"chromosomal passenger complex localization to kinetochore","type":"exact"},{"name":"chromosome passenger complex localisation to kinetochore","type":"related"}],"termid":"GO:0072356"}


id: PBO:0091031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER chaperone Rot1","termid":"PBO:0091031"}


id: PBO:0073033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin","termid":"PBO:0073033"}


id: GO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of an IgM isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM receptor activity","termid":"GO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgM receptor activity","synonyms":[{"name":"high affinity IgM receptor activity","type":"exact"}],"termid":"GO:0002172"}


id: GO:1900938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900938"}


id: PBO:0076017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 11","termid":"PBO:0076017"}


id: PBO:0084539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms heterotrimeric complex with Erp2p, Emp24p, and Erv25p; localized to COPII-coated vesicles; ERP1 has a paralog, ERP6, that arose from the whole genome duplication","termid":"PBO:0084539"}


id: GO:1903221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic recombination-dependent replication fork processing. Regulation of mitotic recombination prevents recombination between inappropriate homologous sequences.","definition_xrefs":["GOC:TermGenie","PMID:23093942","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"regulation of mitotic recombination-dependent replication fork processing","synonyms":[{"name":"prevention of genomic instability induced by DNA replication fork arrest","type":"related"},{"name":"regulation of mitotic recombination involved in collapsed replication fork processing","type":"exact"},{"name":"regulation of mitotic recombination involved in recovery from replication fork arrest","type":"exact"},{"name":"regulation of mitotic recombination involved in recovery from replication fork stalling","type":"exact"},{"name":"regulation of mitotic recombination involved in replication fork processing","type":"exact"},{"name":"regulation of mitotic recombination involved in replication fork restart","type":"related"},{"name":"regulation of mitotic recombination involved in replication restart","type":"related"}],"termid":"GO:1903221"}


id: GO:1901684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arsenate is transported across a membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"arsenate ion transmembrane transport","termid":"GO:1901684"}


id: PBO:0030750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000987)","termid":"PBO:0030750"}


id: PBO:0059220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 2B","termid":"PBO:0059220"}


id: PBO:0069210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 465, pseudogene","termid":"PBO:0069210"}


id: GO:0070986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the left/right axis. The left/right axis is defined by a line that runs orthogonal to both the anterior/posterior and dorsal/ventral axes. Each side is defined from the viewpoint of the organism rather of the observer (as per anatomical axes).","definition_xrefs":["GOC:gvg","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"left/right pattern formation","termid":"GO:0060972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left/right axis specification","synonyms":[{"name":"left-right axis specification","type":"exact"},{"name":"left/right axis determination","type":"related"}],"termid":"GO:0070986"}


id: PBO:0014260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved ATP binding protein, implicated in sister chromatid cohesion Gpn2 (predicted)","termid":"PBO:0014260"}


id: PBO:0074619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 19","termid":"PBO:0074619"}


id: PBO:0041824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARS1 antisense RNA 1","termid":"PBO:0041824"}


id: PBO:0088383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex RNA-binding protein subunit 9","termid":"PBO:0088383"}


id: PBO:0016543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-prenyltransferase","termid":"PBO:0016543"}


id: PBO:0074944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 109A","termid":"PBO:0074944"}


id: SO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000765 cosmid_clone (obsolete SO:0000765)","termid":"SO:0000765"}


id: PR:O60092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14C8.11c gene.","definition_xrefs":["UniProtKB:O60092","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.11c","synonyms":[{"name":"Spom972h-SPBC14C8.11c","type":"exact"}],"termid":"PR:O60092"}


id: PBO:0060326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1D divergent transcript","termid":"PBO:0060326"}


id: PBO:0038815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 2","termid":"PBO:0038815"}


id: PBO:0031846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031846"}


id: GO:1903984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:24939851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902043"},{"relation_name":"is_a","term_name":"regulation of TRAIL-activated apoptotic signaling pathway","termid":"GO:1903121"},{"relation_name":"positively_regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"activation of TRAIL-activated apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-induced apoptotic signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"narrow"},{"name":"positive regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903984"}


id: GO:0075149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of signal transduction in response to host (obsolete GO:0075149)","synonyms":[{"name":"negative regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075149"}


id: PBO:0076317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptopodin","termid":"PBO:0076317"}


id: GO:0075160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075160)","synonyms":[{"name":"positive regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075160"}


id: GO:0048811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc.","definition_xrefs":["PMID:11494318","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia morphogenesis","termid":"GO:0048809"},{"relation_name":"part_of","term_name":"male analia development","termid":"GO:0045496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia morphogenesis","termid":"GO:0048811"}


id: SO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic rRNA is an RNA component of the small or large subunits of cytosolic ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA","synonyms":[{"name":"cytosolic rRNA","type":"exact"},{"name":"cytosolic ribosomal RNA","type":"exact"}],"termid":"SO:0002343"}


id: FYPO:0007744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prophase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"spindle collapse during meiotic prophase I","synonyms":[{"name":"broken meiotic spindle during prophase I","type":"related"},{"name":"meiotic spindle breakage during prophase I","type":"exact"},{"name":"spindle collapse during prophase I of meiotic cell cycle","type":"related"},{"name":"spindle collapse during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007744"}


id: GO:0006488
data:
  {"annotated_genes":["SJAG_00924","SJAG_03056","SJAG_03764","SJAG_02903","SJAG_02102","SJAG_00437","SJAG_00334","SJAG_04952","SJAG_03774","SJAG_04770","SJAG_04821","SJAG_00747","SJAG_03656","SJAG_00394","SJAG_04954","SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71133,74134,83077,86596,89309,93676,93728,95283,95300,97560,98818,100215,104445,106198,107649,111752],"is_not":false,"summary":null,"term":"GO:0006488"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P.","definition_xrefs":["ISBN:0471331309","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide-lipid intermediate biosynthetic process","termid":"GO:0006490"},{"relation_name":"is_a","term_name":"dolichol metabolic process","termid":"GO:0019348"},{"relation_name":"part_of","term_name":"protein N-linked glycosylation","termid":"GO:0006487"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_02102":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006486","GO:0006629"],"is_obsolete":false,"name":"dolichol-linked oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"N-linked glycan precursor biosynthesis","type":"exact"},{"name":"N-linked glycan precursor biosynthetic process","type":"exact"},{"name":"dolichol-linked oligosaccharide anabolism","type":"exact"},{"name":"dolichol-linked oligosaccharide biosynthesis","type":"exact"},{"name":"dolichol-linked oligosaccharide formation","type":"exact"},{"name":"dolichol-linked oligosaccharide synthesis","type":"exact"},{"name":"oligosaccharide-PP-dolichol assembly","type":"exact"}],"termid":"GO:0006488","terms_by_termid":{"GO:0006488":null}}


id: GO:0061667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of URM1 to a substrate protein via the reaction X-URM1 + S = X + S-URM1, where X is either an E2 or E3 enzyme, the X-URM1 linkage is a thioester bond, and the S-URM1 linkage is an isopeptide bond between the C-terminal amino acid of URM1 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"URM1 transferase activity","termid":"GO:0042294"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019787","GO:0016740","GO:0003824","GO:0140096","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"URM1 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061667"}


id: GO:1905649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of shell calcification.","definition_xrefs":["GO_REF:0000058","PMID:14648763","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"is_a","term_name":"regulation of shell calcification","termid":"GO:1905648"},{"relation_name":"negatively_regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of shell calcification","synonyms":[{"name":"down regulation of shell calcification","type":"exact"},{"name":"down-regulation of shell calcification","type":"exact"},{"name":"downregulation of shell calcification","type":"exact"},{"name":"inhibition of shell calcification","type":"narrow"}],"termid":"GO:1905649"}


id: PBO:0089377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, pinin ortholog Pnn1","termid":"PBO:0089377"}


id: PBO:0072426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28","termid":"PBO:0072426"}


id: PR:Q09825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sad1 gene.","definition_xrefs":["UniProtKB:Q09825","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein sad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.01","synonyms":[{"name":"Spom972h-sad1","type":"exact"}],"termid":"PR:Q09825"}


id: PBO:0034334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_contributes_to","termid":"PBO:0034334"}


id: MOD:01950
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-isoglutamyl histamine.","definition_xrefs":["PubMed:23022564","RESID:AA0596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl histamine","synonyms":[{"name":"(2S)-2-amino-5-([2-(1H-imidazol-5-yl)ethyl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"(gamma-glutamyl)histamine","type":"exact"},{"name":"L-isoglutamyl histamine","type":"exact"}],"termid":"MOD:01950"}


id: PBO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 28","termid":"PBO:0080042"}


id: GO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth that results in the elongation of a line that defines polarity or symmetry in an anatomical structure.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis elongation","synonyms":[{"name":"elongation of an axis","type":"related"}],"termid":"GO:0003401"}


id: PBO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease kappa ortholog (predicted)","termid":"PBO:0002298"}


id: PBO:0056487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAU2 sister chromatid cohesion factor","termid":"PBO:0056487"}


id: PBO:0028375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oxanine_DNA_N-glycosylase_activity","termid":"PBO:0028375"}


id: GO:0047611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(8)-acetylspermidine + H2O = acetate + spermidine.","definition_xrefs":["RHEA:23928","EC:3.5.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0019213","GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"acetylspermidine deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLSPERMIDINE-DEACETYLASE-RXN","KEGG_REACTION:R07300"],"synonyms":[{"name":"8-N-acetylspermidine amidohydrolase activity","type":"related"},{"name":"N(1)-acetylspermidine amidohydrolase activity","type":"related"},{"name":"N(8)-acetylspermidine amidohydrolase activity","type":"related"},{"name":"N(8)-acetylspermidine deacetylase activity","type":"related"},{"name":"N(8)-monoacetylspermidine deacetylase activity","type":"related"},{"name":"N-acetylspermidine deacetylase activity","type":"broad"},{"name":"N1-acetylspermidine amidohydrolase activity","type":"related"},{"name":"N8-acetylspermidine amidohydrolase activity","type":"related"},{"name":"N8-acetylspermidine deacetylase activity","type":"related"},{"name":"N8-monoacetylspermidine deacetylase activity","type":"related"}],"termid":"GO:0047611"}


id: GO:0099506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicles along actin filaments within a cell, powered by molecular motors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along actin filament","termid":"GO:0030050"},{"relation_name":"is_a","term_name":"synaptic vesicle cytoskeletal transport","termid":"GO:0099514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle transport along actin filament","termid":"GO:0099506"}


id: GO:0022834
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72507,78247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ligand-gated channel activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0022834","terms_by_termid":{"GO:0005227":null}}


id: PBO:0085544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; mutation affects 20S pre-rRNA processing; homologous to mammalian ribosomal protein S4, no bacterial homolog; RPS4A has a paralog, RPS4B, that arose from the whole genome duplication","termid":"PBO:0085544"}


id: GO:0090174
data:
  {"annotated_genes":["SJAG_00430","SJAG_05184","SJAG_02241","SJAG_04513","SJAG_03889","SJAG_03403","SJAG_02587","SJAG_04978","SJAG_02315","SJAG_00810","SJAG_02595","SJAG_01324","SJAG_03536","SJAG_00826","SJAG_03347","SJAG_03552","SJAG_00171","SJAG_01633","SJAG_03848","SJAG_03670","SJAG_04023","SJAG_00380","SJAG_00557","SJAG_01697","SJAG_00204"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[71119,75903,94812,78064,74016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[91325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[84076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[74845],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[76502,71578,75453,86071,107774,96140,112495,76875,96372,112536,103854,104807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[90934,73222,76380,75112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of two lipid bilayers to form a single organelle membrane.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"organelle membrane fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090174","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null}}


id: MOD:00675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively either removes neutral hydrogen atoms (proton and electron), or adds oxygen atoms to a residue with or without the removal of hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized residue","synonyms":[{"name":"OxRes","type":"exact"}],"termid":"MOD:00675"}


id: PBO:0078397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 7-1","termid":"PBO:0078397"}


id: PBO:0054414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1810","termid":"PBO:0054414"}


id: PBO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 homolog, RNA polymerase I transcription factor","termid":"PBO:0072577"}


id: PBO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1 (predicted)","termid":"PBO:0004381"}


id: GO:0051131
data:
  {"annotated_genes":["SJAG_00984","SJAG_01545","SJAG_03784"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75194,75391,76844],"is_not":false,"summary":null,"term":"GO:0051131"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00984":null,"SJAG_01545":null,"SJAG_03784":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"chaperone-mediated protein complex assembly","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0034619"],"synonyms":[{"name":"cellular chaperone-mediated protein complex assembly","type":"exact"},{"name":"chaperone activity","type":"related"},{"name":"protein complex assembly, multichaperone pathway","type":"exact"}],"termid":"GO:0051131","terms_by_termid":{"GO:0051131":null}}


id: PBO:0057458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 577","termid":"PBO:0057458"}


id: GO:1902650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["PMID:22199252","GO_REF:0000058","GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2A-H2B dimer displacement (obsolete GO:1902650)","synonyms":[{"name":"down regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"down-regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"downregulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"inhibition of histone H2A-H2B dimer displacement","type":"narrow"}],"termid":"GO:1902650"}


id: PBO:0059342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 1","termid":"PBO:0059342"}


id: PBO:0034312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-composed_primarily_of","termid":"PBO:0034312"}


id: PBO:0056767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 18","termid":"PBO:0056767"}


id: PBO:0082025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger ZZ-type and EF-hand domain containing 1","termid":"PBO:0082025"}


id: PBO:0042752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein V like 2","termid":"PBO:0042752"}


id: FYPO:0006370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of a protein in cis and trans between heterochromatin domains occurs to a lower extent than normal in regions of subtelomeric heterochromatin.","definition_xrefs":["PMID:26438724","GO:1990707","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein exchange at subtelomeric heterochromatin","synonyms":[{"name":"decreased protein exchange at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein exchange at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein exchange at telomeric heterochromatin","type":"related"},{"name":"decreased protein motility on subtelomeric heterochromatin","type":"exact"},{"name":"reduced protein exchange at subtelomeric heterochromatin","type":"exact"}],"termid":"FYPO:0006370"}


id: GO:0046439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-cysteine metabolic process","synonyms":[{"name":"L-cysteine metabolism","type":"exact"}],"termid":"GO:0046439"}


id: FYPO:0006519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein degradation during mitotic G1 phase","synonyms":[{"name":"decreased protein breakdown during mitotic G1 phase","type":"exact"},{"name":"decreased protein catabolic process during mitotic G1 phase","type":"exact"},{"name":"decreased protein catabolism during mitotic G1 phase","type":"exact"},{"name":"decreased protein degradation during G1 phase during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"reduced protein degradation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006519"}


id: PBO:0034034
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_publication_date","termid":"PBO:0034034"}


id: PBO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0000746"}


id: PBO:0062100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 50 pseudogene","termid":"PBO:0062100"}


id: PBO:0059510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block III","termid":"PBO:0059510"}


id: GO:0030926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of calcium into a 4Mn-Ca-4O complex by bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide as in the photosystem II catalytic site.","definition_xrefs":["PMID:14764885","RESID:AA0366"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium incorporation into metallo-oxygen cluster via bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide (obsolete GO:0030926)","termid":"GO:0030926"}


id: PBO:0085180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of several telomeric Y' element-encoded DNA helicases; known as Y'-Help1 (Y'-HELicase Protein 1)","termid":"PBO:0085180"}


id: SO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is the most 3-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_intron","synonyms":[{"name":"3' intron","type":"exact"},{"name":"3' intron sequence","type":"related"},{"name":"three prime intron","type":"exact"}],"termid":"SO:0000192"}


id: GO:0021681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar granule layer over time, from its formation to the mature structure. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:dgh","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer development","termid":"GO:0021681"}


id: GO:0102471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6C-glucosyl-2-hydroxynaringenin = isovitexin-7-olate + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-hydroxynaringenin-6C-glucoside dehydratase activity","secondary_identifiers":["MetaCyc:RXN-14076"],"termid":"GO:0102471"}


id: FYPO:0000368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"output_of","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuolar morphology during vegetative growth","synonyms":[{"name":"abnormal vacuolar morphology during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0000368"}


id: PBO:0081218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MIZ-type containing 2","termid":"PBO:0081218"}


id: GO:0033819
data:
  {"annotated_genes":["SJAG_01271"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70566],"is_not":false,"summary":null,"term":"GO:0033819"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + octanoyl-[ACP] = H+ + holo-[ACP] + N6-octanoyl-L-lysyl-[protein].","definition_xrefs":["RHEA:17665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoyltransferase activity","termid":"GO:0016415"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"lipoyl(octanoyl) transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0102555","Reactome:R-HSA-6793590","EC:2.3.1.181","MetaCyc:RXN0-947"],"synonyms":[{"name":"lipoate/octanoate transferase activity","type":"exact"},{"name":"lipoyl (octanoyl)-acyl carrier protein:protein transferase activity","type":"exact"},{"name":"lipoyl (octanoyl)-acyl-carrier-protein-protein N-lipoyltransferase activity","type":"exact"},{"name":"octanoyl transferase activity (acting on glycine-cleavage complex H protein)","type":"narrow"},{"name":"octanoyl-acyl carrier protein-protein N-octanoyltransferase activity","type":"exact"},{"name":"octanoyl-acyl-carrier-protein-protein N-octanoyltransferase activity","type":"exact"},{"name":"octanoyl-acyl-carrier-protein:protein N-octanoyltransferase activity","type":"exact"}],"termid":"GO:0033819","terms_by_termid":{"GO:0033819":null}}


id: GO:0061428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.","definition_xrefs":["PMID:17785431","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to hypoxia (obsolete GO:0061428)","termid":"GO:0061428"}


id: GO:0031660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G2/M transition of the cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle (obsolete GO:0031660)","synonyms":[{"name":"G2/M-specific regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"regulation of cyclin-dependent protein kinase activity during G2/M","type":"related"},{"name":"regulation of cyclin-dependent protein kinase activity involved in G2/M","type":"broad"}],"termid":"GO:0031660"}


id: GO:0032965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collagen biosynthetic process","synonyms":[{"name":"regulation of collagen anabolism","type":"exact"},{"name":"regulation of collagen biosynthesis","type":"exact"},{"name":"regulation of collagen formation","type":"exact"},{"name":"regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032965"}


id: GO:0030530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete heterogeneous nuclear ribonucleoprotein complex (obsolete GO:0030530)","secondary_identifiers":["Wikipedia:Heterogeneous_ribonucleoprotein_particle"],"synonyms":[{"name":"heterogeneous nuclear ribonucleoprotein","type":"exact"},{"name":"heterogeneous nuclear ribonucleoprotein complex","type":"exact"},{"name":"hnRNP","type":"exact"}],"termid":"GO:0030530"}


id: GO:1905285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a fibrous ring of heart is generated and organized.","definition_xrefs":["PMID:16037571","GOC:rl","GOC:TermGenie","GOC:BHF","GO_REF:0000083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibrous ring of heart morphogenesis","synonyms":[{"name":"Lower's ring morphogenesis","type":"related"},{"name":"annulus fibrosus cordis morphogenesis","type":"related"},{"name":"anulus fibrosus cordis morphogenesis","type":"related"},{"name":"anulus fibrosus of heart morphogenesis","type":"exact"},{"name":"aortic annulus morphogenesis","type":"related"},{"name":"atrioventricular ring morphogenesis","type":"related"},{"name":"coronary tendon morphogenesis","type":"related"}],"termid":"GO:1905285"}


id: PBO:0018057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase Trm140 (predicted)","termid":"PBO:0018057"}


id: GO:0004152
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + A = AH(2) + orotate.","definition_xrefs":["RHEA:18073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DIHYDROOROTATE-DEHYDROGENASE-RXN","Reactome:R-HSA-73569","KEGG_REACTION:R01868"],"termid":"GO:0004152","terms_by_termid":{"GO:0106430":null}}


id: FYPO:0004180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein present as aggregates of misfolded protein is greater than normal.","definition_xrefs":["PomBase:mah","PMID:24936793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular protein aggregate level","synonyms":[{"name":"increased cellular protein aggregate level during mitotic cell cycle","type":"related"},{"name":"increased cellular protein aggregate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004180"}


id: PBO:0005446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK-activated protein kinase Srk1","termid":"PBO:0005446"}


id: PBO:0003071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related protein Mfr1","termid":"PBO:0003071"}


id: PBO:0017741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase Rdl2 (predicted)","termid":"PBO:0017741"}


id: PBO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_nucleoid_decreased_number","termid":"PBO:0031372"}


id: GO:0004077
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77490],"is_not":false,"summary":null,"term":"GO:0004077"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + apo-(acetyl-CoA:carbon-dioxide ligase (ADP forming)) = AMP + diphosphate + (acetyl-CoA:carbon-dioxide ligase (ADP forming)).","definition_xrefs":["EC:6.3.4.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biotin-protein ligase activity","termid":"GO:0018271"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874","GO:0140096"],"is_obsolete":false,"name":"biotin-[acetyl-CoA-carboxylase] ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:BIOTINLIG-RXN","RHEA:11756"],"synonyms":[{"name":"HCS","type":"related"},{"name":"acetyl CoA holocarboxylase synthetase activity","type":"related"},{"name":"acetyl coenzyme A holocarboxylase synthetase activity","type":"related"},{"name":"acetyl-CoA carboxylase biotin holoenzyme synthetase activity","type":"related"},{"name":"biotin holoenzyme synthetase activity","type":"related"},{"name":"biotin--[acetyl-CoA carboxylase] synthetase activity","type":"related"},{"name":"biotin--protein ligase activity","type":"related"},{"name":"biotin-acetyl coenzyme A carboxylase synthetase activity","type":"related"},{"name":"biotin-acetyl-CoA carboxylase synthetase","type":"broad"},{"name":"biotin-acetyl-CoA-carboxylase ligase activity","type":"related"},{"name":"biotin:apo-acetyl-CoA:carbon-dioxide ligase (ADP-forming) ligase (AMP-forming)","type":"related"},{"name":"biotin:apocarboxylase ligase activity","type":"related"}],"termid":"GO:0004077","terms_by_termid":{"GO:0004077":null}}


id: GO:0007026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"negative regulation of microtubule depolymerization","synonyms":[{"name":"down regulation of microtubule depolymerization","type":"exact"},{"name":"down-regulation of microtubule depolymerization","type":"exact"},{"name":"downregulation of microtubule depolymerization","type":"exact"},{"name":"inhibition of microtubule depolymerization","type":"narrow"},{"name":"microtubule rescue","type":"narrow"},{"name":"microtubule stabilization","type":"exact"},{"name":"negative regulation of microtubule catastrophe","type":"narrow"},{"name":"negative regulation of microtubule disassembly","type":"exact"}],"termid":"GO:0007026"}


id: PBO:0089461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A (predicted)","termid":"PBO:0089461"}


id: PBO:0045486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC1/DSC2 antisense RNA","termid":"PBO:0045486"}


id: PBO:0059856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase","termid":"PBO:0059856"}


id: PBO:0017521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating activity Atg10","termid":"PBO:0017521"}


id: PBO:0054362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1755","termid":"PBO:0054362"}


id: MOD:01671
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoaspartyl)-L-threonine, using free L-asparagine and releasing ammonia.","definition_xrefs":["PubMed:8706862","RESID:AA0525#THR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"O-(L-isoaspartyl)-L-threonine","termid":"MOD:01978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine (active site intermediate)","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-isoaspartyl threonine intermediate","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01671"}


id: PR:O94453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquinone biosynthesis protein COQ4, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12922:SF5","PRO:DNx","OMA:SCHPO00361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein coq4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.12c","secondary_identifiers":["UniProtKB:O94453"],"synonyms":[{"name":"Spom972h-COQ4","type":"exact"},{"name":"coenzyme Q biosynthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94453"}


id: PBO:0039147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 2","termid":"PBO:0039147"}


id: PBO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CRE_promoter","termid":"PBO:0034604"}


id: PATO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000124 relative length (obsolete PATO:0000124)","termid":"PATO:0000124"}


id: PBO:0090301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8","termid":"PBO:0090301"}


id: FYPO:0005580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more lipid metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) during a cellular response to hypoxia. Lipid metabolism RNAs are transcribed from genes whose products are involved in any lipid metabolic process.","definition_xrefs":["PomBase:mah","PMID:27053105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of lipid metabolism gene mRNA during vegetative growth","termid":"FYPO:0004880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of lipid metabolism gene mRNA during cellular response to hypoxia","synonyms":[{"name":"decreased level of lipid metabolism gene RNA during cellular response to hypoxia","type":"exact"},{"name":"decreased level of lipid metabolism gene mRNA during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"decreased level of lipid metabolism gene mRNA during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"decreased level of lipid metabolism gene transcripts during cellular response to hypoxia","type":"exact"},{"name":"decreased lipid metabolism gene mRNA accumulation during cellular response to hypoxia","type":"related"},{"name":"reduced level of lipid metabolism gene mRNA during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0005580"}


id: GO:0036288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ximelagatran stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ximelagatran","termid":"GO:0036288"}


id: GO:0052676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD+ = 3-methylbutanal + NADH + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["KEGG_REACTION:R05685","EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-methylbutanol:NAD oxidoreductase activity","secondary_identifiers":["RHEA:18529"],"synonyms":[{"name":"3-methylbutanal reductase (NAD) activity","type":"exact"},{"name":"3-methylbutanol:NAD+ oxidoreductase activity","type":"related"},{"name":"3-methylbutyraldehyde reductase (NAD) activity","type":"exact"},{"name":"isoamyl alcohol oxidase (NAD) activity","type":"exact"}],"termid":"GO:0052676"}


id: PBO:0044499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystin 1","termid":"PBO:0044499"}


id: FYPO:0002763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}


id: GO:0036128
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sperm-specific voltage-gated calcium channel that controls the intracellular calcium ion concentration and, thereby, the swimming behavior of sperm. Consists of a heteromeric tetramer surrounding a calcium ion- selective pore. May also contain additional auxiliary subunits.","definition_xrefs":["GOC:sp","PMID:21224844","PMID:22354039","PMID:17478420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel complex","termid":"GO:0005891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"CatSper complex","synonyms":[{"name":"CATSPER channel","type":"exact"},{"name":"CatSper channel complex","type":"exact"}],"termid":"GO:0036128"}


id: GO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coenzyme metabolic process (obsolete GO:0051198)","synonyms":[{"name":"down regulation of coenzyme metabolic process","type":"exact"},{"name":"down-regulation of coenzyme metabolic process","type":"exact"},{"name":"downregulation of coenzyme metabolic process","type":"exact"},{"name":"inhibition of coenzyme metabolic process","type":"narrow"},{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"negative regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"negative regulation of coenzyme metabolism","type":"exact"}],"termid":"GO:0051198"}


id: PBO:0004622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp4 (predicted)","termid":"PBO:0004622"}


id: PBO:0046105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 8","termid":"PBO:0046105"}


id: PBO:0069951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1244, pseudogene","termid":"PBO:0069951"}


id: PBO:0080276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 39 pseudogene","termid":"PBO:0080276"}


id: GO:0070171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"negatively_regulates","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tooth mineralization","termid":"GO:0070171"}


id: PBO:0053732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 951","termid":"PBO:0053732"}


id: PBO:0039772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AQP5 and AQP2 antisense RNA 2","termid":"PBO:0039772"}


id: PR:Q9USV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mep33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein 33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.02","synonyms":[{"name":"Spom972h-mep33","type":"exact"}],"termid":"PR:Q9USV4"}


id: PBO:0049252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone regulated TBC protein 1","termid":"PBO:0049252"}


id: PBO:0081905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 862","termid":"PBO:0081905"}


id: FYPO:0004110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during exit from mitosis is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during exit from mitosis","synonyms":[{"name":"normal protein accumulation during exit from mitosis","type":"related"},{"name":"normal protein level during exit from mitosis during vegetative growth","type":"exact"},{"name":"normal protein level during mitosis to G1 transition","type":"exact"},{"name":"normal protein level during mitotic exit","type":"exact"}],"termid":"FYPO:0004110"}


id: GO:0071483
data:
  {"annotated_genes":["SJAG_02860","SJAG_05242"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114354,114355],"is_not":false,"summary":null,"term":"GO:0071483"},{"annotations":[66277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02860":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to blue light","references_by_uniquename":{"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"cellular response to blue light stimulus","type":"exact"}],"termid":"GO:0071483","terms_by_termid":{"GO:0009785":null,"GO:0071483":null}}


id: PBO:0030369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_origin_firing_efficiency","termid":"PBO:0030369"}


id: GO:0090280
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion import","termid":"GO:0090279"},{"relation_name":"positively_regulates","term_name":"calcium ion import","termid":"GO:0070509"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transmembrane calcium influx","type":"related"}],"termid":"GO:0090280","terms_by_termid":{"GO:1905665":null}}


id: PATO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased volume","synonyms":[{"name":"high volume","type":"exact"},{"name":"large volume","type":"related"}],"termid":"PATO:0000595"}


id: GO:0099111
data:
  {"annotated_genes":["SJAG_00140","SJAG_02761","SJAG_02509","SJAG_03073","SJAG_04597","SJAG_01775","SJAG_01546","SJAG_02731","SJAG_05185","SJAG_00397","SJAG_00332","SJAG_05220","SJAG_04387","SJAG_02336","SJAG_01297","SJAG_02286","SJAG_00368","SJAG_00113","SJAG_01863","SJAG_01224","SJAG_01613","SJAG_00918","SJAG_02561","SJAG_02045","SJAG_01211","SJAG_01370","SJAG_03673","SJAG_04143","SJAG_03835","SJAG_04001","SJAG_03437","SJAG_00851","SJAG_05319","SJAG_02737","SJAG_05266","SJAG_01371","SJAG_03540","SJAG_04003","SJAG_02431","SJAG_01662"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83333,111947,87287,86843,96012,98222,90586,98506,86469,92919,106165,109029,106510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[106334,101791],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[96719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"},{"annotations":[102612,109031,111951,104763,74206,96728,70687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[92994,94552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[94553,86845,92921,83337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[89814],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[99000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[113609,99159,95679,103441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[109169,85252,92137,93954,102689,95805,105036,104048,84671,86457,111922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[86618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.","definition_xrefs":["ISBN:0815316194","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"microtubule-based transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0099111","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0098863":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1903563":null,"GO:1990976":null}}


id: FYPO:0005911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination begins later than normal.","definition_xrefs":["PMID:19023408","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0000298"],"is_obsolete":false,"name":"delayed onset of meiotic recombination double-strand break repair","synonyms":[{"name":"delayed meiotic recombination double-strand break repair","type":"exact"},{"name":"delayed onset of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"delayed onset of double-strand break repair during meiotic recombination","type":"exact"},{"name":"delayed onset of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"delayed onset of meiotic DNA double-strand break repair","type":"exact"}],"termid":"FYPO:0005911"}


id: SO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that utilizes the E. coli F factor.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Fosmid"],"synonyms":[{"name":"fosmid vector","type":"related"}],"termid":"SO:0000158"}


id: PBO:0087522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of holo-CPF; holo-CPF is a multiprotein complex and functional homolog of mammalian CPSF, required for the cleavage and polyadenylation of mRNA and snoRNA 3' ends; involved in pre-tRNA processing; binds to the phosphorylated CTD of RNAPII","termid":"PBO:0087522"}


id: GO:0051657
data:
  {"annotated_genes":["SJAG_01116","SJAG_03170","SJAG_00053","SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85907,99626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[102219,110247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of organelle location","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of organelle localization","type":"related"}],"termid":"GO:0051657","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: PBO:0109125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin zinc finger protein 1","termid":"PBO:0109125"}


id: PBO:0085254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein of the plasma membrane; interacts with Mid2p; regulates the cell integrity pathway mediated by Pkc1p and Slt2p; the authentic protein is detected in a phosphorylated state in highly purified mitochondria","termid":"PBO:0085254"}


id: PBO:0017094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo TFIIH complex subunit Tfb6","termid":"PBO:0017094"}


id: GO:0062110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombinase complex disassembly, the disaggregation of a DNA recombinase complex into its constituent components.","definition_xrefs":["PMID:30297419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"regulation of DNA recombinase disassembly","termid":"GO:0062109"},{"relation_name":"negatively_regulates","term_name":"DNA recombinase disassembly","termid":"GO:1990986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombinase disassembly","termid":"GO:0062110"}


id: PBO:0069768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1051, pseudogene","termid":"PBO:0069768"}


id: GO:0160034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Toll receptor ligand protein activation cascade.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160033"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"positively_regulates","term_name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160034"}


id: FYPO:0005032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a normal (i.e. indistinguishable from wild type) frequency.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mutation rate","synonyms":[{"name":"normal mutation rate during mitotic cell cycle","type":"related"},{"name":"normal mutation rate during vegetative growth","type":"exact"}],"termid":"FYPO:0005032"}


id: PBO:0087721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA and SAGA-like transcriptional regulatory complexes; interacts with Spt15p to activate transcription of some RNA polymerase II-dependent genes, also functions to inhibit transcription at some promoters; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087721"}


id: MOD:00959
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,3',5,5'-TerTyr (Crosslink)","termid":"MOD:00959"}


id: PBO:0079925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URB2 ribosome biogenesis homolog","termid":"PBO:0079925"}


id: PBO:0060481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 3","termid":"PBO:0060481"}


id: PR:O42648
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nht1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box-containing protein C10F6.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.08c","synonyms":[{"name":"Spom972h-nht1","type":"exact"}],"termid":"PR:O42648"}


id: PR:P40371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.02","synonyms":[{"name":"PP2C-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptc1","type":"exact"}],"termid":"PR:P40371"}


id: GO:0010353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose stimulus.","definition_xrefs":["PMID:17031512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose","synonyms":[{"name":"response to trehalose stimulus","type":"exact"}],"termid":"GO:0010353"}


id: GO:0004315
data:
  {"annotated_genes":["SJAG_01946","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75792,93030],"is_not":false,"summary":null,"term":"GO:0004315"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein].","definition_xrefs":["RHEA:22836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01946":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] synthase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.41","MetaCyc:2.3.1.179-RXN","MetaCyc:3-OXOACYL-ACP-SYNTH-RXN","GO:0033817"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein synthase activity","type":"related"},{"name":"3-oxoacyl-ACP synthase activity","type":"exact"},{"name":"3-oxoacyl-[acyl-carrier protein] synthase activity","type":"exact"},{"name":"3-oxoacyl-acyl carrier protein synthase I activity","type":"narrow"},{"name":"3-oxoacyl-acyl-carrier-protein synthase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:malonyl-acyl-carrier-protein C-acyltransferase (decarboxylating)","type":"related"},{"name":"acyl-malonyl acyl carrier protein-condensing enzyme activity","type":"related"},{"name":"acyl-malonyl(acyl-carrier-protein)-condensing enzyme activity","type":"related"},{"name":"beta-ketoacyl acyl carrier protein synthase activity","type":"related"},{"name":"beta-ketoacyl synthetase activity","type":"related"},{"name":"beta-ketoacyl-ACP synthase I activity","type":"narrow"},{"name":"beta-ketoacyl-ACP synthase II activity","type":"narrow"},{"name":"beta-ketoacyl-ACP synthetase activity","type":"related"},{"name":"beta-ketoacyl-[acyl carrier protein] synthase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthetase activity","type":"related"},{"name":"beta-ketoacyl-acyl-carrier-protein synthase I","type":"narrow"},{"name":"beta-ketoacyl-acyl-carrier-protein synthase II activity","type":"narrow"},{"name":"beta-ketoacylsynthase activity","type":"related"},{"name":"condensing enzyme activity","type":"broad"},{"name":"fatty acid condensing enzyme activity","type":"broad"},{"name":"ketoacyl-ACP synthase activity","type":"exact"}],"termid":"GO:0004315","terms_by_termid":{"GO:0004315":null}}


id: PBO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 197 pseudogene","termid":"PBO:0070254"}


id: PBO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 2","termid":"PBO:0051033"}


id: GO:1902373
data:
  {"annotated_genes":["SJAG_03448","SJAG_04825","SJAG_02573","SJAG_04946","SJAG_03696","SJAG_03283","SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84613],"is_not":false,"summary":null,"term":"GO:1902373"},{"annotations":[77482,95380,85695,77207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[85001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[85292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:22626865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467","GO:0044248"],"is_obsolete":false,"name":"negative regulation of mRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mRNA breakdown","type":"exact"},{"name":"down regulation of mRNA catabolic process","type":"exact"},{"name":"down regulation of mRNA catabolism","type":"exact"},{"name":"down regulation of mRNA decay","type":"related"},{"name":"down regulation of mRNA degradation","type":"exact"},{"name":"down-regulation of mRNA breakdown","type":"exact"},{"name":"down-regulation of mRNA catabolic process","type":"exact"},{"name":"down-regulation of mRNA catabolism","type":"exact"},{"name":"down-regulation of mRNA decay","type":"related"},{"name":"down-regulation of mRNA degradation","type":"exact"},{"name":"downregulation of mRNA breakdown","type":"exact"},{"name":"downregulation of mRNA catabolic process","type":"exact"},{"name":"downregulation of mRNA catabolism","type":"exact"},{"name":"downregulation of mRNA decay","type":"related"},{"name":"downregulation of mRNA degradation","type":"exact"},{"name":"inhibition of mRNA breakdown","type":"narrow"},{"name":"inhibition of mRNA catabolic process","type":"narrow"},{"name":"inhibition of mRNA catabolism","type":"narrow"},{"name":"inhibition of mRNA decay","type":"related"},{"name":"inhibition of mRNA degradation","type":"narrow"},{"name":"negative regulation of mRNA breakdown","type":"exact"},{"name":"negative regulation of mRNA catabolism","type":"exact"},{"name":"negative regulation of mRNA decay","type":"related"},{"name":"negative regulation of mRNA degradation","type":"exact"}],"termid":"GO:1902373","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0120271":null,"GO:1902373":null}}


id: PBO:0089815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome passenger complex subunit, INCENP ortholog Pic1","termid":"PBO:0089815"}


id: PR:O13642
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lipoyl synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02841","PANTHER:PTHR10949:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyl synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.15","secondary_identifiers":["UniProtKB:O13642"],"synonyms":[{"name":"LS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lip-syn (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIAS","type":"exact"},{"name":"lipoate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13642"}


id: GO:0016896
data:
  {"annotated_genes":["SJAG_03132","SJAG_04824","SJAG_03745","SJAG_04006","SJAG_02540","SJAG_00081","SJAG_03876","SJAG_00401","SJAG_04818","SJAG_03276","SJAG_02275","SJAG_04407","SJAG_01836","SJAG_06586","SJAG_04369","SJAG_04084","SJAG_04519","SJAG_00841","SJAG_01798","SJAG_00966","SJAG_04153","SJAG_02993","SJAG_01822"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70552,100479,102648,103665,85483,91005,94266,106362,113261,110362,99656,98928,98202,97353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[76574,73093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[109497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[73493,71059,72105,76213,77477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[89143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity","termid":"GO:0004532"},{"relation_name":"is_a","term_name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016796"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0004527","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"RNA exonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429860","EC:3.1.13.-"],"synonyms":[{"name":"exoribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"exoribonuclease activity, producing 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016896","terms_by_termid":{"GO:0000175":null,"GO:0004534":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: GO:0034158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 8.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 8 signaling pathway","synonyms":[{"name":"TLR8 signaling pathway","type":"exact"},{"name":"toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034158"}


id: GO:0060042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the retina is generated and organized.","definition_xrefs":["GOC:mtg_sensu","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina morphogenesis in camera-type eye","synonyms":[{"name":"retina morphogenesis in camera-style eye","type":"exact"},{"name":"retinogenesis","type":"exact"}],"termid":"GO:0060042"}


id: PBO:0064980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 36, pseudogene","termid":"PBO:0064980"}


id: PBO:0027458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_morphology","termid":"PBO:0027458"}


id: PBO:0060169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal triglyceride transfer protein","termid":"PBO:0060169"}


id: PBO:0041738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathelicidin antimicrobial peptide","termid":"PBO:0041738"}


id: GO:0070742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C2H2-type zinc finger domain of a protein. The C2H2 zinc finger is the classical zinc finger domain, in which two conserved cysteines and histidines co-ordinate a zinc ion.","definition_xrefs":["GOC:BHF","Pfam:PF00096","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"C2H2 zinc finger domain binding","termid":"GO:0070742"}


id: PBO:0055175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2599","termid":"PBO:0055175"}


id: PBO:0078843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 5-1","termid":"PBO:0078843"}


id: PBO:0066743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 40","termid":"PBO:0066743"}


id: GO:1902227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["PMID:16705167","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"down regulation of M-CSF signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"down-regulation of M-CSF signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"downregulation of M-CSF signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"inhibition of M-CSF signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"negative regulation of M-CSF signaling pathway","type":"exact"},{"name":"negative regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902227"}


id: PBO:0034558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2B-K119_ubiquitination","termid":"PBO:0034558"}


id: PATO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000887 relative litter size value (obsolete PATO:0000887)","termid":"PATO:0000887"}


id: PBO:0078828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 5-1","termid":"PBO:0078828"}


id: GO:0047912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galacturonate + ATP = 1-phospho-alpha-D-galacturonate + ADP + 2 H+.","definition_xrefs":["RHEA:12965","EC:2.7.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"galacturonokinase activity","secondary_identifiers":["MetaCyc:GALACTURONOKINASE-RXN","KEGG_REACTION:R01980"],"synonyms":[{"name":"ATP:D-galacturonate 1-phosphotransferase activity","type":"related"},{"name":"galacturonokinase (phosphorylating) D-galacturonic acid kinase activity","type":"related"}],"termid":"GO:0047912"}


id: PBO:0041298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4B","termid":"PBO:0041298"}


id: PATO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality of the collection or massing of one physical object within another physical object.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation","synonyms":[{"name":"pooled","type":"related"}],"termid":"PATO:0002269"}


id: GO:1990206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonyl-Ile + H2O = jasmonic acid + L-isoleucine.","definition_xrefs":["PMID:23943861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"jasmonyl-Ile conjugate hydrolase activity","synonyms":[{"name":"JA-Ile hydrolase","type":"related"}],"termid":"GO:1990206"}


id: FYPO:0004815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of siRNA derived from antisense transcription of ribosomal DNA measured in a cell is greater than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased rDNA antisense siRNA level","synonyms":[{"name":"increased accumulation of rDNA antisense small RNAs","type":"related"},{"name":"increased antisense small RNA at rDNA","type":"exact"},{"name":"increased antisense transcription-derived small RNA level at rDNA","type":"exact"},{"name":"increased rDNA antisense small RNA accumulation","type":"related"},{"name":"increased rDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"increased rDNA antisense small RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004815"}


id: GO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 2-methyl-3-hydroxybutyryl-CoA = NADH + H+ + 2-methylaceto-acetyl-CoA.","definition_xrefs":["EC:1.1.1.178","MetaCyc:1.1.1.178-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity","secondary_identifiers":["RHEA:13281"],"synonyms":[{"name":"(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase activity","type":"related"},{"name":"2-methyl-3-hydroxy-butyryl CoA dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"}],"termid":"GO:0047015"}


id: PBO:0013464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Erf2","termid":"PBO:0013464"}


id: PBO:0058884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10400","termid":"PBO:0058884"}


id: PBO:0083179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YHR180W-A","termid":"PBO:0083179"}


id: MOD:00595
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an manose group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"mannosylated","termid":"MOD:00727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"mannosylated residue","synonyms":[{"name":"ManRes","type":"exact"}],"termid":"MOD:00595"}


id: MOD:01423
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a palmitoleyl group.","definition_xrefs":["Unimod:431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"palmitoleylated residue","termid":"MOD:01423"}


id: GO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin J (PGJ(2)), a metabolite of prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["PMID:12878180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin J receptor activity","synonyms":[{"name":"PGJ receptor activity","type":"related"},{"name":"PGJ(2) receptor activity","type":"exact"}],"termid":"GO:0001785"}


