# terms

id: PBO:0049063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 78","termid":"PBO:0049063"}


id: PBO:0075360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX1 overlapping transcript","termid":"PBO:0075360"}


id: GO:0070405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ammonium ions (NH4+).","definition_xrefs":["CHEBI:28938","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ammonium ion binding","synonyms":[{"name":"ammonium binding","type":"related"}],"termid":"GO:0070405"}


id: GO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein (obsolete GO:0003675)","synonyms":[{"name":"protein","type":"exact"}],"termid":"GO:0003675"}


id: PBO:0086329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with ubiquitin-like N terminus; subunit of Nuclear Excision Repair Factor 2 (NEF2) with Rad4p that binds damaged DNA; enhances protein deglycosylation activity of Png1p; also involved, with Rad4p, in ubiquitylated protein turnover; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage","termid":"PBO:0086329"}


id: GO:0042858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine).","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"chrysobactin metabolic process","termid":"GO:0042857"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"chrysobactin biosynthetic process","secondary_identifiers":["GO:0031184","GO:0031183"],"synonyms":[{"name":"chrysobactin anabolism","type":"exact"},{"name":"chrysobactin biosynthesis","type":"exact"},{"name":"chrysobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"chrysobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"chrysobactin formation","type":"exact"},{"name":"chrysobactin synthesis","type":"exact"}],"termid":"GO:0042858"}


id: GO:0110098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium import into the mitochondrion.","definition_xrefs":["GOC:sl","PMID:24085037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium import into the mitochondrion","termid":"GO:0110097"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium import into the mitochondrion","termid":"GO:0110098"}


id: PBO:0041665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACTIN antisense RNA 1","termid":"PBO:0041665"}


id: GO:0061960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, or rate of heme oxygenase activity.","definition_xrefs":["GOC:rph","PMID:24844779","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heme oxygenase activity","termid":"GO:0061960"}


id: GO:1901145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in nephron morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}


id: GO:0060774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated in response to detection of auxin that contributes to the radial pattern formation process resulting in the formation of leaf or flower primordia around the center of a shoot apical meristem.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"},{"relation_name":"part_of","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"auxin mediated signaling pathway involved in phyllotactic patterning","synonyms":[{"name":"auxin mediated signalling pathway involved in phyllotactic patterning","type":"exact"}],"termid":"GO:0060774"}


id: PBO:0083623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to monoubiquitinate PCNA-K164; heterodimer binds single-stranded DNA and has single-stranded DNA dependent ATPase activity; required for postreplication repair; SUMO-targeted ubiquitin ligase (STUbl) that contains a SUMO-interacting motif (SIM) which stimulates its ubiquitin ligase activity towards the sumoylated form of PCNA","termid":"PBO:0083623"}


id: GO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the heteromeric enzymes, located in the mitochondrion, that act in the tricarboxylic acid (TCA) cycle.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle enzyme complex","termid":"GO:0045239"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"mitochondrial tricarboxylic acid cycle enzyme complex","synonyms":[{"name":"TCA cycle enzyme complex","type":"broad"}],"termid":"GO:0030062"}


id: PBO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0017947"}


id: FYECO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Calcium ions were completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium absent","termid":"FYECO:0000150"}


id: PBO:0039616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 pseudogene 3","termid":"PBO:0039616"}


id: GO:0033918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,4-beta-D-linkages between D-galactose 4-sulfate and 3,6-anhydro-D-galactose in kappa-carrageenans.","definition_xrefs":["EC:3.2.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"kappa-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.83-RXN"],"synonyms":[{"name":"kappa-carrageenan 4-beta-D-glycanohydrolase (configuration-retaining) activity","type":"related"},{"name":"kappa-carrageenan 4-beta-D-glycanohydrolase activity","type":"related"}],"termid":"GO:0033918"}


id: PBO:0074341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1","termid":"PBO:0074341"}


id: PBO:0076115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18 pseudogene 1","termid":"PBO:0076115"}


id: GO:2000498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000498)","synonyms":[{"name":"regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000498"}


id: PBO:0059823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 3","termid":"PBO:0059823"}


id: PBO:0051316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-118 (pseudogene)","termid":"PBO:0051316"}


id: GO:0007079
data:
  {"annotated_genes":["SJAG_02761","SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95675,99151,103433],"is_not":false,"summary":null,"term":"GO:0007079"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of chromosomes from the center of the spindle towards the spindle poles occurs. This mediates by the shortening of microtubules attached to the chromosomes, during mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome movement towards spindle pole","termid":"GO:0051305"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic chromosome movement towards spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007082"],"synonyms":[{"name":"chromosome migration to spindle pole during mitosis","type":"exact"},{"name":"chromosome movement towards spindle pole during mitosis","type":"exact"},{"name":"mitotic chromosome movement","type":"broad"},{"name":"mitotic chromosome movement to spindle pole","type":"exact"},{"name":"mitotic sister chromosome movement towards spindle pole","type":"exact"},{"name":"sister chromosome movement towards spindle pole during mitosis","type":"exact"}],"termid":"GO:0007079","terms_by_termid":{"GO:0007079":null}}


id: PBO:0051338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-10 (pseudogene)","termid":"PBO:0051338"}


id: PBO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 4","termid":"PBO:0061486"}


id: PBO:0040249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4D cysteine peptidase","termid":"PBO:0040249"}


id: PBO:0083664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum membrane protein; may facilitate protein-protein interactions between the Erg26p dehydrogenase and the Erg27p 3-ketoreductase and/or tether these enzymes to the ER, also interacts with Erg6p","termid":"PBO:0083664"}


id: PBO:0003549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein Rtn1","termid":"PBO:0003549"}


id: FYPO:0000833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"},{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during vegetative growth","synonyms":[{"name":"normal protein level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000833"}


id: PBO:0047968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAS1 related extracellular matrix 1","termid":"PBO:0047968"}


id: GO:0042595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of deprivation of nourishment.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to starvation","synonyms":[{"name":"behavioural response to starvation","type":"exact"}],"termid":"GO:0042595"}


id: PBO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in multidrug resistance; inhibits oxidative damage induced by amphotericin B; overexpression increases flocculation, biofilm formation, invasive and pseudohyphal growth; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; null mutant displays increased translation rate and increased readthrough of premature stop codons; BSC2 has a paralog, IRC23, that arose from the whole genome duplication","termid":"PBO:0086043"}


id: PBO:0029300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_N-acetyl-D-glucosaminate_level_during_G0","termid":"PBO:0029300"}


id: PBO:0074077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 1","termid":"PBO:0074077"}


id: PBO:0041439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 57","termid":"PBO:0041439"}


id: PBO:0036347
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEUcine requiring","termid":"PBO:0036347"}


id: PBO:0045102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 2 like","termid":"PBO:0045102"}


id: GO:0004141
data:
  {"annotated_genes":["SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75147],"is_not":false,"summary":null,"term":"GO:0004141"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-diaminononanoate + ATP + CO2 = ADP + dethiobiotin + 4 H+ + phosphate.","definition_xrefs":["RHEA:15805","EC:6.3.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dethiobiotin synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03182","MetaCyc:DETHIOBIOTIN-SYN-RXN"],"synonyms":[{"name":"7,8-diaminononanoate:carbon-dioxide cyclo-ligase (ADP-forming)","type":"related"},{"name":"DTB synthetase activity","type":"related"},{"name":"desthiobiotin synthase activity","type":"related"}],"termid":"GO:0004141","terms_by_termid":{"GO:0004141":null}}


id: FYPO:0000589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of ascospore formation is increased, i.e. sporulation takes place more rapidly than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000121","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of sporulation","synonyms":[{"name":"increased rate of ascospore formation","type":"exact"},{"name":"sporulation: increased rate","type":"related"}],"termid":"FYPO:0000589"}


id: RO:HOM0000057
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Parallelism that involves morphologically very similar structures, occurring only within some members of a taxon and absent in the common ancestor (which possessed the developmental basis to develop this character).","definition_xrefs":["ISBN:0199141118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_parallelism_relationship_with","termid":"RO:HOM0000005"},{"relation_name":"is_a","term_name":"in_syngeny_relationship_with","termid":"RO:HOM0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_latent_homology_relationship_with","synonyms":[{"name":"apomorphic tendency","type":"exact"},{"name":"cryptic homology","type":"exact"},{"name":"homoiology","type":"related"},{"name":"homoplastic tendency","type":"related"},{"name":"latent homologous to","type":"exact"},{"name":"re-awakening","type":"related"},{"name":"underlying synapomorphy","type":"exact"}],"termid":"RO:HOM0000057"}


id: PBO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADX epimerase (predicted)","termid":"PBO:0007585"}


id: GO:0045744
data:
  {"annotated_genes":["SJAG_02426","SJAG_01245","SJAG_00266","SJAG_02481","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103151,95728,88178,111412,87526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"down-regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"downregulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"inhibition of G-protein coupled receptor protein signaling pathway","type":"narrow"},{"name":"negative regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"negative regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of GPCR protein signaling pathway","type":"exact"},{"name":"negative regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0045744","terms_by_termid":{"GO:0110034":null}}


id: PBO:0046548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 2","termid":"PBO:0046548"}


id: GO:0120019
data:
  {"annotated_genes":["SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92897],"is_not":false,"summary":null,"term":"GO:0120019"}]},"cv_name":"molecular_function","definition":"Removes phosphatidylcholine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:25797198","PMID:24220498","GOC:krc","PMID:20823909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0120013"],"is_obsolete":false,"name":"phosphatidylcholine transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane phosphatidylcholine transfer activity","type":"narrow"},{"name":"phosphatidylcholine carrier activity","type":"exact"}],"termid":"GO:0120019","terms_by_termid":{"GO:0120019":null}}


id: PBO:0063372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1 like","termid":"PBO:0063372"}


id: FYPO:0007201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization to the site of cell division is decreased.","definition_xrefs":["PMID:30201262","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of actin cortical patch localization","termid":"FYPO:0006176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of actin cortical patch localization to cell division site","synonyms":[{"name":"decreased rate of actin cortical patch localisation to cell division site","type":"exact"},{"name":"decreased rate of actin cortical patch localization to cell division site during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin cortical patch localization to cell division site during vegetative growth","type":"exact"},{"name":"decreased rate of actin cortical patch movement to cell division site","type":"related"},{"name":"decreased rate of actin patch localization to cell division site","type":"exact"},{"name":"reduced rate of actin cortical patch localization to cell division site","type":"exact"}],"termid":"FYPO:0007201"}


id: PBO:0060433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA family member 4, pseudogene","termid":"PBO:0060433"}


id: PBO:0036220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_protein_movement_within_plasma_membrane_at_cell_tip","termid":"PBO:0036220"}


id: PBO:0061256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 1","termid":"PBO:0061256"}


id: GO:0043149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a stress fiber. A stress fiber is a contractile actin filament bundle that consists of short actin filaments with alternating polarity.","definition_xrefs":["PMID:16651381","GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile actin filament bundle assembly","termid":"GO:0030038"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"stress fiber assembly","synonyms":[{"name":"actin cable assembly","type":"related"},{"name":"actin cable formation","type":"related"},{"name":"stress fibre biosynthesis","type":"related"},{"name":"stress fibre formation","type":"related"}],"termid":"GO:0043149"}


id: GO:0090133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a mesendoderm undergo directed movement. The mesendoderm is the epithelial tissue that gives rise to both mesoderm and endoderm.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium migration","termid":"GO:0090132"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"},{"relation_name":"part_of","term_name":"mesendoderm development","termid":"GO:0048382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesendoderm migration","termid":"GO:0090133"}


id: SO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The many tandem repeats (identical or related) of a short basic repeating unit; many have a base composition or other property different from the genome average that allows them to be separated from the bulk (main band) genomic DNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"satellite_DNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Satellite_DNA"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:satellite","type":"exact"},{"name":"satellite DNA","type":"exact"}],"termid":"SO:0000005"}


id: PBO:0041430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 82","termid":"PBO:0041430"}


id: PBO:0073074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 3","termid":"PBO:0073074"}


id: GO:0018474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-carboxybenzaldehyde + NAD+ + H2O = NADH + 2 H+ + phthalate.","definition_xrefs":["UM-BBD_reactionID:r0490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-carboxybenzaldehyde dehydrogenase activity","secondary_identifiers":["EC:1.2.1.-"],"termid":"GO:0018474"}


id: PBO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt1 (predicted)","termid":"PBO:0004912"}


id: PBO:0043105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 3","termid":"PBO:0043105"}


id: GO:0150070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginase activity.","definition_xrefs":["PMID:26670206","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of arginase activity","termid":"GO:0150070"}


id: GO:2001053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001053"}


id: GO:0000408
data:
  {"annotated_genes":["SJAG_06560","SJAG_04201","SJAG_04182","SJAG_00378","SJAG_02863"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71184,77909,93615,94758,111344],"is_not":false,"summary":null,"term":"GO:0000408"}]},"cv_name":"cellular_component","definition":"A protein complex involved in t6A tRNA modification. For example, in Saccharomyces cerevisiae the complex contains Bud32p, Kae1p, Gon7p, Cgi121p, and Pcc1p.","definition_xrefs":["GOC:elh","GOC:vw","PMID:16874308","PMID:16564010","PMID:21183954","PMID:23945934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EKC/KEOPS complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"KEOPS/EKC complex","type":"exact"},{"name":"TCTC","type":"related"},{"name":"endopeptidase-like kinase chromatin-associated protein complex","type":"exact"},{"name":"kinase, putative endopeptidase and other proteins of small size protein complex","type":"exact"},{"name":"threonyl-carbamoly transferase complex","type":"related"}],"termid":"GO:0000408","terms_by_termid":{"GO:0000408":null}}


id: PBO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline","termid":"PBO:0000312"}


id: PBO:0049326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIB","termid":"PBO:0049326"}


id: PBO:0070528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 27","termid":"PBO:0070528"}


id: GO:0051775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["PMID:15131240","PMID:16987039","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to redox state","secondary_identifiers":["GO:0006980"],"synonyms":[{"name":"redox signal response","type":"exact"}],"termid":"GO:0051775"}


id: GO:0044389
data:
  {"annotated_genes":["SJAG_01686","SJAG_03643","SJAG_01134","SJAG_00803","SJAG_00615","SJAG_01540","SJAG_01365","SJAG_04573","SJAG_02591","SJAG_00452","SJAG_03575","SJAG_04335","SJAG_02253","SJAG_01226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59158,72880,77102,77564,77679,72279,62908,78157,78663,77769,65431,67281,74766,70254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031625"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin-like protein ligase, such as ubiquitin-ligase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_00803":null,"SJAG_01134":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_01540":null,"SJAG_01686":null,"SJAG_02253":null,"SJAG_02591":null,"SJAG_03575":null,"SJAG_03643":null,"SJAG_04335":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ubiquitin-like protein ligase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"E3 protein ligase binding","type":"exact"},{"name":"small conjugating protein ligase binding","type":"exact"}],"termid":"GO:0044389","terms_by_termid":{"GO:0031625":null}}


id: PBO:0067980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 282","termid":"PBO:0067980"}


id: PBO:0051657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 2","termid":"PBO:0051657"}


id: MOD:00157
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to an L-tryptophan quinone.","definition_xrefs":["DeltaMass:0","RESID:AA0148","Unimod:392#W","PubMed:2028257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophyl quinone","synonyms":[{"name":"(2S)-2-amino-3-(6,7-dioxo-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2-amino-3-(6,7-dioxo-6,7-dihydro-1H-indol-3-yl)-propionic acid","type":"exact"},{"name":"3-[(2S)-2-amino-2-carboxyethyl]-6,7-indolinedione","type":"exact"},{"name":"6,7 Dione (from Tryptophan)","type":"exact"},{"name":"L-tryptophyl quinone","type":"exact"},{"name":"MOD_RES Tryptophylquinone","type":"exact"},{"name":"N-(3-carboxy-1-oxopropyl)-L-tryptophan","type":"exact"},{"name":"Quinone","type":"related"},{"name":"TrpQ","type":"exact"},{"name":"quinone","type":"related"}],"termid":"MOD:00157"}


id: PBO:0005867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific polypeptide Pc","termid":"PBO:0005867"}


id: PBO:0055925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A13, pseudogene","termid":"PBO:0055925"}


id: FYPO:0005975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lithium ion export from the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal lithium export","synonyms":[{"name":"normal lithium export during mitotic cell cycle","type":"related"},{"name":"normal lithium export during vegetative growth","type":"exact"},{"name":"normal lithium export from cell","type":"exact"},{"name":"normal lithium ion export from cell","type":"exact"}],"termid":"FYPO:0005975"}


id: PBO:0082727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and possibly pre-replicative complexes; required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-replicative complex (pre-RC) formation and maintenance during DNA replication licensing; relocalizes to the cytosol in response to hypoxia; essential gene","termid":"PBO:0082727"}


id: MOD:01957
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 2-hydroxyproline.","definition_xrefs":["RESID:AA0602","ChEBI:141809","PubMed:23385463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyproline","synonyms":[{"name":"(2R)-2-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2-hydroxyproline","type":"exact"},{"name":"2-oxidanylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES 2-hydroxyproline","type":"exact"},{"name":"alpha-hydroxyproline","type":"exact"}],"termid":"MOD:01957"}


id: MOD:01882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the carbonyl of an amino acid residue at position n with the alpha amino of a glycine residue at position n+2 to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"}


id: GO:0010536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency or rate of activation of JAK (Janus Activated Kinase) protein. The activation of JAK protein is the process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["GOC:tb","GOC:dph","PMID:9135582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of Janus kinase activity","termid":"GO:0010533"},{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"positively_regulates","term_name":"activation of Janus kinase activity","termid":"GO:0042976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation of Janus kinase activity","secondary_identifiers":["GO:0010535","GO:0010537"],"synonyms":[{"name":"positive regulation of activation of JAK protein","type":"exact"},{"name":"positive regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK1 protein","type":"narrow"},{"name":"positive regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK protein","type":"related"},{"name":"positive regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0010536"}


id: PBO:0078322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 4","termid":"PBO:0078322"}


id: PBO:0083145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF DAL81/YIR023W","termid":"PBO:0083145"}


id: PBO:0084478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type locus; note that the systematic sequence in SGD contains MATalpha sequences","termid":"PBO:0084478"}


id: GO:1990019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a protein storage vacuole, a storage vacuole that contains a lytic vacuole.","definition_xrefs":["PMID:21670741","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein storage vacuole organization","termid":"GO:1990019"}


id: PBO:0054374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1768","termid":"PBO:0054374"}


id: PATO:0001366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being small and resembling a point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"punctiform","termid":"PATO:0001366"}


id: GO:0051196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coenzyme metabolic process (obsolete GO:0051196)","synonyms":[{"name":"regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"regulation of coenzyme metabolism","type":"exact"}],"termid":"GO:0051196"}


id: MOD:00805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminoglucosyl)-L-serine.","definition_xrefs":["PubMed:8404891","RESID:AA0398","PubMed:3086323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(N-acetylamino)glucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) serine","type":"exact"},{"name":"CARBOHYD O-linked (HexNAc)","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylamino)glucosyl-L-serine","type":"exact"},{"name":"O-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylglucosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O3-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"OGlcNAcSer","type":"exact"}],"termid":"MOD:00805"}


id: FYPO:0003693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (S2-, also called acid labile sulfide) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"},{"relation_name":"is_a","term_name":"decreased cellular sulfide level","termid":"FYPO:0001412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"sulfide absent from cell","synonyms":[{"name":"sulfide absent from cell during mitotic cell cycle","type":"related"},{"name":"sulfide absent from cell during vegetative growth","type":"exact"},{"name":"sulfide ions absent from cell","type":"exact"},{"name":"sulphide absent from cell","type":"exact"}],"termid":"FYPO:0003693"}


id: PBO:0039624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A7","termid":"PBO:0039624"}


id: PBO:0074252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B3","termid":"PBO:0074252"}


id: PBO:0060376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb related transcription factor, partner of profilin","termid":"PBO:0060376"}


id: PBO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Alp41","termid":"PBO:0000541"}


id: GO:0016830
data:
  {"annotated_genes":["SJAG_03373","SJAG_02176","SJAG_00937","SJAG_02450","SJAG_02902","SJAG_02230","SJAG_03349","SJAG_04265","SJAG_02734","SJAG_02505","SJAG_03524","SJAG_03632","SJAG_03164","SJAG_02980","SJAG_00815","SJAG_04627","SJAG_01310","SJAG_03743","SJAG_04842","SJAG_04109","SJAG_00706","SJAG_04242","SJAG_01455","SJAG_00043","SJAG_03775","SJAG_02225","SJAG_01081","SJAG_00480"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106359"},{"annotations":[76627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008686"},{"annotations":[101287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008696"},{"annotations":[109574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043727"},{"annotations":[76417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004014"},{"annotations":[102342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016832"},{"annotations":[109719,98747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004049"},{"annotations":[100161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004150"},{"annotations":[75818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004163"},{"annotations":[109660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097023"},{"annotations":[71005,72498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004332"},{"annotations":[77969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004351"},{"annotations":[98748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033984"},{"annotations":[77861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004425"},{"annotations":[71856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008732"},{"annotations":[74704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004586"},{"annotations":[73397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004590"},{"annotations":[113457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008948"},{"annotations":[105544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016833"},{"annotations":[70866,91781,77628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004609"},{"annotations":[84902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004633"},{"annotations":[109577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004638"},{"annotations":[71403,70944,73217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004737"},{"annotations":[108907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102521"},{"annotations":[73944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004853"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of C-C bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00480":null,"SJAG_00706":null,"SJAG_00815":null,"SJAG_00937":null,"SJAG_01081":null,"SJAG_01310":null,"SJAG_01455":null,"SJAG_02176":null,"SJAG_02225":null,"SJAG_02230":null,"SJAG_02450":null,"SJAG_02505":null,"SJAG_02734":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03164":null,"SJAG_03349":null,"SJAG_03373":null,"SJAG_03524":null,"SJAG_03632":null,"SJAG_03743":null,"SJAG_03775":null,"SJAG_04109":null,"SJAG_04242":null,"SJAG_04265":null,"SJAG_04627":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon-carbon lyase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.-.-","Reactome:R-HSA-389611"],"synonyms":[{"name":"other carbon-carbon lyase activity","type":"narrow"}],"termid":"GO:0016830","terms_by_termid":{"GO:0004014":null,"GO:0004049":null,"GO:0004150":null,"GO:0004163":null,"GO:0004332":null,"GO:0004351":null,"GO:0004425":null,"GO:0004586":null,"GO:0004590":null,"GO:0004609":null,"GO:0004633":null,"GO:0004638":null,"GO:0004737":null,"GO:0004853":null,"GO:0008686":null,"GO:0008696":null,"GO:0008732":null,"GO:0008948":null,"GO:0016832":null,"GO:0016833":null,"GO:0033984":null,"GO:0043727":null,"GO:0097023":null,"GO:0102521":null,"GO:0106359":null}}


id: GO:0050627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + mycothiol = NAD(P)H + H+ + mycothione.","definition_xrefs":["MetaCyc:1.8.1.15-RXN","EC:1.8.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"mycothione reductase activity","synonyms":[{"name":"mycothiol-disulfide reductase activity","type":"related"},{"name":"mycothiol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050627"}


id: PBO:0040625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 4","termid":"PBO:0040625"}


id: PBO:0078208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-1 (non-functional)","termid":"PBO:0078208"}


id: PBO:0089769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-type spliceosomal complex ATPase Cwf11","termid":"PBO:0089769"}


id: GO:0090242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to somitogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retinoic acid receptor signaling pathway involved in somitogenesis","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:0090242"}


id: GO:0051320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"interphase","termid":"GO:0051325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S phase","secondary_identifiers":["Wikipedia:S_phase"],"synonyms":[{"name":"S-phase","type":"exact"}],"termid":"GO:0051320"}


id: PBO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_(obsolete_condition)","termid":"PBO:0034423"}


id: PBO:0082541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein; YDR134C has a paralog, CCW12, that arose from the whole genome duplication; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 67, which in other strains encodes glutamine","termid":"PBO:0082541"}


id: PBO:0063389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 6","termid":"PBO:0063389"}


id: GO:0016756
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70594],"is_not":false,"summary":null,"term":"GO:0016756"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathione + Glu(-Cys)(n)-Gly = Gly + Glu(-Cys)(n+1)-Gly.","definition_xrefs":["EC:2.3.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"glutathione gamma-glutamylcysteinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0042143","MetaCyc:2.3.2.15-RXN","RHEA:17917"],"synonyms":[{"name":"phytochelatin synthase activity","type":"narrow"}],"termid":"GO:0016756","terms_by_termid":{"GO:0016756":null}}


id: MOD:01320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:16078144","Unimod:176#K","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to lysine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01320"}


id: PBO:0081416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 271, pseudogene","termid":"PBO:0081416"}


id: PBO:0041347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 80","termid":"PBO:0041347"}


id: GO:2000765
data:
  {"annotated_genes":["SJAG_04291","SJAG_04312","SJAG_02026","SJAG_00251","SJAG_04383","SJAG_01079","SJAG_04159","SJAG_04544","SJAG_03869","SJAG_00786","SJAG_01058","SJAG_03501","SJAG_01942","SJAG_01047","SJAG_04873","SJAG_00423","SJAG_02072","SJAG_02285","SJAG_05000","SJAG_16454","SJAG_00169","SJAG_02592","SJAG_00690","SJAG_02467","SJAG_02638","SJAG_02723","SJAG_02043","SJAG_04130","SJAG_04085","SJAG_04890","SJAG_00600"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85766,91453,91586,95559,96003,97834,100459,104857,106271,107490,111832,112442],"is_not":false,"summary":null,"term":"GO:2000765"},{"annotations":[97116,109908,94750,90970,113181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[86767,107260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[69924,72014,94647,88241,89767,110635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[101853,112121,69767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[99215,98576,90601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"regulates","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00251":null,"SJAG_00423":null,"SJAG_00600":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01047":null,"SJAG_01058":null,"SJAG_01079":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02043":null,"SJAG_02072":null,"SJAG_02285":null,"SJAG_02467":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_02723":null,"SJAG_03501":null,"SJAG_03869":null,"SJAG_04085":null,"SJAG_04130":null,"SJAG_04159":null,"SJAG_04291":null,"SJAG_04312":null,"SJAG_04383":null,"SJAG_04544":null,"SJAG_04873":null,"SJAG_04890":null,"SJAG_05000":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"regulation of cytoplasmic translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000765","terms_by_termid":{"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null}}


id: PBO:0039297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG11 alpha-1,2-mannosyltransferase","termid":"PBO:0039297"}


id: GO:0044160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of any host thylakoid.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host thylakoid","termid":"GO:0044159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid membrane","termid":"GO:0044160"}


id: PR:P21537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 9, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.10","synonyms":[{"name":"Spom972h-atp9","type":"exact"},{"name":"lipid-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21537"}


id: GO:0048206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the cis-Golgi to the rough ER.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"},{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","synonyms":[{"name":"cis-Golgi to rough ER targeting","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum targeting","type":"exact"},{"name":"vesicle targeting, cis-Golgi to rough ER","type":"exact"}],"termid":"GO:0048206"}


id: FYPO:0006385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cell tip during nitrogen starvation","synonyms":[{"name":"normal protein localisation to cell tip during nitrogen starvation","type":"exact"},{"name":"normal protein localization to cell end during nitrogen starvation","type":"exact"},{"name":"normal protein localization to cell tip during nitrogen depletion","type":"exact"},{"name":"normal protein localization to cell tip during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006385"}


id: PBO:0085178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of four subunits of the ESCRT-III complex; involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway; recruited from the cytoplasm to endosomal membranes; ESCRT-III stands for endosomal sorting complex required for transport III","termid":"PBO:0085178"}


id: GO:0046878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of saliva.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of saliva secretion","termid":"GO:0046877"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of saliva secretion","synonyms":[{"name":"activation of saliva secretion","type":"narrow"},{"name":"stimulation of saliva secretion","type":"narrow"},{"name":"up regulation of saliva secretion","type":"exact"},{"name":"up-regulation of saliva secretion","type":"exact"},{"name":"upregulation of saliva secretion","type":"exact"}],"termid":"GO:0046878"}


id: PBO:0082550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central component of the peroxisomal importomer complex; peroxisomal protein import machinery docking complex component; interacts with both PTS1 (Pex5p) and PTS2 (Pex7p) peroxisomal matrix protein signal recognition factors and membrane receptor Pex13p","termid":"PBO:0082550"}


id: PBO:0089630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X ortholog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0089630"}


id: PBO:0029562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029562"}


id: SO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that donates the spliced leader to other mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mini_exon_donor_RNA","synonyms":[{"name":"mini exon donor RNA","type":"exact"},{"name":"mini-exon donor RNA","type":"exact"}],"termid":"SO:0000635"}


id: PBO:0031313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septation","termid":"PBO:0031313"}


id: PATO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratification","termid":"PATO:0002067"}


id: PBO:0110326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOC antisense RNA 1","termid":"PBO:0110326"}


id: GO:0018039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glutamine amide by hydrolysis and oxidation of an interior Gln-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0086"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamine amidation (obsolete GO:0018039)","termid":"GO:0018039"}


id: PBO:0073513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 6","termid":"PBO:0073513"}


id: PBO:0027507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_acetone","termid":"PBO:0027507"}


id: PBO:0052656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 24","termid":"PBO:0052656"}


id: PBO:0056187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A1","termid":"PBO:0056187"}


id: GO:0050217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyhexan-3-one = 2 propanal.","definition_xrefs":["RHEA:11100","EC:4.1.2.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"propioin synthase activity","secondary_identifiers":["KEGG_REACTION:R00038","MetaCyc:PROPIOIN-SYNTHASE-RXN"],"synonyms":[{"name":"4-hydroxy-3-hexanone aldolase activity","type":"related"},{"name":"4-hydroxy-3-hexanone propanal-lyase (propanal-forming)","type":"related"},{"name":"4-hydroxy-3-hexanone propanal-lyase activity","type":"related"}],"termid":"GO:0050217"}


id: PBO:0088771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"con-6 family conserved fungal protein","termid":"PBO:0088771"}


id: PBO:0070522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 21","termid":"PBO:0070522"}


id: PBO:0008485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A-type phosphatase inhibitor Sds23/Moc1","termid":"PBO:0008485"}


id: SO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified lysine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_lysine","secondary_identifiers":["MOD:00912"],"synonyms":[{"name":"ModLys","type":"exact"},{"name":"modified L lysine","type":"exact"},{"name":"modified L-lysine","type":"exact"}],"termid":"SO:0001400"}


id: GO:0072251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}


id: GO:0045988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"negatively_regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of striated muscle contraction","synonyms":[{"name":"down regulation of striated muscle contraction","type":"exact"},{"name":"down-regulation of striated muscle contraction","type":"exact"},{"name":"downregulation of striated muscle contraction","type":"exact"},{"name":"inhibition of striated muscle contraction","type":"narrow"}],"termid":"GO:0045988"}


id: PBO:0065588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 4","termid":"PBO:0065588"}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: PBO:0080356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 11 pseudogene","termid":"PBO:0080356"}


id: PBO:0058582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715b","termid":"PBO:0058582"}


id: FYPO:0002917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002917"}


id: GO:0015979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosynthesis","secondary_identifiers":["Wikipedia:Photosynthesis"],"termid":"GO:0015979"}


id: FYPO:0003619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA splicing","termid":"FYPO:0003468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"normal mRNA splicing, via spliceosome","synonyms":[{"name":"normal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"normal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0003619"}


id: PBO:0066094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 4C, pseudogene","termid":"PBO:0066094"}


id: GO:0019560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including hydantoin-5-propionate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"histidine catabolic process to hydantoin-5-propionate","secondary_identifiers":["MetaCyc:HISHP-PWY"],"synonyms":[{"name":"histidine breakdown to hydantoin-5-propionate","type":"exact"},{"name":"histidine degradation to hydantoin-5-propionate","type":"exact"}],"termid":"GO:0019560"}


id: GO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine biosynthetic process","synonyms":[{"name":"fructosamine anabolism","type":"exact"},{"name":"fructosamine biosynthesis","type":"exact"},{"name":"fructosamine formation","type":"exact"},{"name":"fructosamine synthesis","type":"exact"}],"termid":"GO:0030391"}


id: GO:0006264
data:
  {"annotated_genes":["SJAG_02658","SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73937,91127],"is_not":false,"summary":null,"term":"GO:0006264"}]},"cv_name":"biological_process","definition":"The process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02658":null,"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"mitochondrial DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial DNA synthesis","type":"related"},{"name":"mtDNA replication","type":"exact"},{"name":"mtDNA synthesis","type":"related"},{"name":"replication of mitochondrial DNA","type":"exact"}],"termid":"GO:0006264","terms_by_termid":{"GO:0006264":null}}


id: PBO:0017928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet2","termid":"PBO:0017928"}


id: PBO:0089478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon subunit Sec61 homolog","termid":"PBO:0089478"}


id: PBO:0005425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain","termid":"PBO:0005425"}


id: GO:0060275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to limited nutrients in the environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"maintenance of stationary phase","termid":"GO:0060274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of stationary phase in response to starvation","termid":"GO:0060275"}


id: PBO:0042368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD177 molecule","termid":"PBO:0042368"}


id: PBO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PQ loop protein","termid":"PBO:0002827"}


id: PBO:0076442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 1","termid":"PBO:0076442"}


id: FYECO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are first grown in minimal medium lacking nitrogen and are then allowed to recover in rich medium.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation and recovery","synonyms":[{"name":"recovery from nitrogen depletion","type":"exact"},{"name":"recovery from nitrogen starvation","type":"exact"}],"termid":"FYECO:0000110"}


id: PBO:0015238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractie ring myosin V regulator Rng8","termid":"PBO:0015238"}


id: PBO:0059233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L3 pseudogene 1","termid":"PBO:0059233"}


id: PBO:0048217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 1","termid":"PBO:0048217"}


id: PBO:0043043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHODL antisense RNA 1","termid":"PBO:0043043"}


id: PBO:0030085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_lithium","termid":"PBO:0030085"}


id: GO:0005754
data:
  {"annotated_genes":["SJAG_02564","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72290,88275],"is_not":false,"summary":null,"term":"GO:0005754"}]},"cv_name":"cellular_component","definition":"The hexamer, comprising three alpha and three beta subunits, that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase, catalytic core","termid":"GO:0045267"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)","termid":"GO:0000275"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02564":null,"SJAG_02598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase, catalytic core","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005754","terms_by_termid":{"GO:0005754":null}}


id: PR:O14019
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase hal4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.16","secondary_identifiers":["UniProtKB:O14019"],"synonyms":[{"name":"Spom972h-CDK16","type":"exact"},{"name":"halotolerance protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine/threonine-protein kinase ppk10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14019"}


id: GO:1905570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:al","GO_REF:0000058","PMID:654321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of siderophore biosynthetic process","termid":"GO:1900706"},{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"positively_regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of ferrichrome biosynthetic process","synonyms":[{"name":"activation of ferrichrome anabolism","type":"narrow"},{"name":"activation of ferrichrome biosynthesis","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferrichrome formation","type":"narrow"},{"name":"activation of ferrichrome synthesis","type":"narrow"},{"name":"positive regulation of ferrichrome anabolism","type":"exact"},{"name":"positive regulation of ferrichrome biosynthesis","type":"exact"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferrichrome formation","type":"exact"},{"name":"positive regulation of ferrichrome synthesis","type":"exact"},{"name":"up regulation of ferrichrome anabolism","type":"exact"},{"name":"up regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferrichrome formation","type":"exact"},{"name":"up regulation of ferrichrome synthesis","type":"exact"},{"name":"up-regulation of ferrichrome anabolism","type":"exact"},{"name":"up-regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferrichrome formation","type":"exact"},{"name":"up-regulation of ferrichrome synthesis","type":"exact"},{"name":"upregulation of ferrichrome anabolism","type":"exact"},{"name":"upregulation of ferrichrome biosynthesis","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferrichrome formation","type":"exact"},{"name":"upregulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905570"}


id: PR:Q9URT2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tho1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URT2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P25A2.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP25A2.03","synonyms":[{"name":"Spom972h-tho1","type":"exact"}],"termid":"PR:Q9URT2"}


id: PR:Q1MTR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.14c gene.","definition_xrefs":["UniProtKB:Q1MTR3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar import and degradation protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.14c","synonyms":[{"name":"Spom972h-SPBC1685.14c","type":"exact"}],"termid":"PR:Q1MTR3"}


id: GO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by detection of stimuli and a neurological response.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"blood pressure regulation by neurological process","type":"exact"},{"name":"fast control of arterial pressure","type":"related"},{"name":"neurological process involved in regulation of systemic arterial blood pressure","type":"exact"},{"name":"neurological system process involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001976"}


id: PBO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 2","termid":"PBO:0051022"}


id: PBO:0073263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 7","termid":"PBO:0073263"}


id: PBO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 helical C-terminal domain containing 1","termid":"PBO:0042972"}


id: GO:0031993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Absorbing energy from one or more photons and transferring their energy to another molecule, usually a protein, within the cell.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy transducer activity","termid":"GO:0031992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"light transducer activity","termid":"GO:0031993"}


id: GO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"},{"relation_name":"positively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cortisol secretion","synonyms":[{"name":"activation of cortisol secretion","type":"narrow"},{"name":"stimulation of cortisol secretion","type":"narrow"},{"name":"up regulation of cortisol secretion","type":"exact"},{"name":"up-regulation of cortisol secretion","type":"exact"},{"name":"upregulation of cortisol secretion","type":"exact"}],"termid":"GO:0051464"}


id: PBO:0072772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A2","termid":"PBO:0072772"}


id: PBO:0034394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_causally_upstream_of","termid":"PBO:0034394"}


id: GO:1990050
data:
  {"annotated_genes":["SJAG_06440","SJAG_00576","SJAG_00230"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69932,96571,97483],"is_not":false,"summary":null,"term":"GO:1990050"}]},"cv_name":"molecular_function","definition":"Removes a phosphatidic acid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. Phosphatidic acid refers to a glycophospholipids with, in general, a saturated fatty acid bonded to carbon-1, an unsaturated fatty acid bonded to carbon-2, and a phosphate group bonded to carbon-3.","definition_xrefs":["PMID:23042293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0120013"],"is_obsolete":false,"name":"phosphatidic acid transfer activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane PA transfer activity","type":"exact"},{"name":"intermembrane phosphatidic acid transfer activity","type":"narrow"},{"name":"phosphatidic acid carrier activity","type":"exact"},{"name":"phosphatidic acid transporter activity","type":"broad"}],"termid":"GO:1990050","terms_by_termid":{"GO:1990050":null}}


id: PBO:0027616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_mitotic_spindle_following_normal_mitosis","termid":"PBO:0027616"}


id: GO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the plasma kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"regulates","term_name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of plasma kallikrein-kinin cascade","termid":"GO:0002529"}


id: PBO:0058023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3973","termid":"PBO:0058023"}


id: PBO:0089175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23","termid":"PBO:0089175"}


id: PBO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf11","termid":"PBO:0000931"}


id: GO:0071996
data:
  {"annotated_genes":["SJAG_05213","SJAG_01344","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91445,92411,113157],"is_not":false,"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"The directed movement of glutathione into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"glutathione transmembrane transport","termid":"GO:0034775"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glutathione transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione transport into vacuole","type":"exact"}],"termid":"GO:0071996","terms_by_termid":{"GO:0071996":null}}


id: PR:O13831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.15","synonyms":[{"name":"Spom972h-trp2","type":"exact"}],"termid":"PR:O13831"}


id: PBO:0067099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 140, pseudogene","termid":"PBO:0067099"}


id: PBO:0110872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone, AAA family ATPase Rvb2","termid":"PBO:0110872"}


id: PBO:0070723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 28","termid":"PBO:0070723"}


id: PBO:0078629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 80, pseudogene","termid":"PBO:0078629"}


id: GO:1904975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bleomycin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11553781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide","termid":"GO:1901652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bleomycin","termid":"GO:1904975"}


id: PBO:0041334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 common eliminated region 1","termid":"PBO:0041334"}


id: GO:0010667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.","definition_xrefs":["GOC:dph","GOC:rl","GOC:tb","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell apoptotic process","termid":"GO:0010664"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell apoptotic process","termid":"GO:0010665"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell apoptotic process","termid":"GO:0010659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell apoptotic process","synonyms":[{"name":"down regulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"down-regulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"downregulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"inhibition of cardiac muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of cardiac muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010667"}


id: GO:0007526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larval somatic muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval somatic muscle development","termid":"GO:0007526"}


id: GO:0050298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-L-phenylalanine + O2 = 5-(L-alanin-3-yl)-2-hydroxy-cis,cis-muconate 6-semialdehyde.","definition_xrefs":["MetaCyc:STIZOLOBINATE-SYNTHASE-RXN","EC:1.13.11.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"stizolobinate synthase activity","secondary_identifiers":["RHEA:18465"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:oxygen 2,3-oxidoreductase (recyclizing)","type":"related"}],"termid":"GO:0050298"}


id: SO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory sequence found in the 5' and 3' UTRs of many mRNAs which encode iron-binding proteins. It has a hairpin structure and is recognized by trans-acting proteins known as iron-regulatory proteins.","definition_xrefs":["PMID:8710843","PMID:3198610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron_responsive_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Iron_responsive_element"],"synonyms":[{"name":"IRE","type":"exact"},{"name":"iron responsive element","type":"exact"}],"termid":"SO:0001182"}


id: PBO:0034356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homeosis_relationship_with","termid":"PBO:0034356"}


id: GO:2000679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}


id: PBO:0091004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit","termid":"PBO:0091004"}


id: PBO:0012264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal of transmembrane channel, truncated","termid":"PBO:0012264"}


id: FYPO:0001528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal GTP binding","termid":"FYPO:0001528"}


id: PBO:0040568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 3","termid":"PBO:0040568"}


id: PBO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA ligase Cdc17","termid":"PBO:0000942"}


id: PBO:0006169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exists_during","termid":"PBO:0006169"}


id: PR:O60117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C16G5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.03","synonyms":[{"name":"Spom972h-SPBC16G5.03","type":"exact"}],"termid":"PR:O60117"}


id: PBO:0089052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase family V, transmembrane protein dislocase/calcium transporting ATPase Cta4","termid":"PBO:0089052"}


id: GO:0120021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes oxysterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:20823909","PMID:24220498","PMID:25797198","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0120013"],"is_obsolete":false,"name":"oxysterol transfer activity","synonyms":[{"name":"intermembrane oxysterol transfer activity","type":"narrow"},{"name":"oxysterol carrier activity","type":"exact"}],"termid":"GO:0120021"}


id: PBO:0045264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain domain 1","termid":"PBO:0045264"}


id: PBO:0040023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 10 pseudogene 1","termid":"PBO:0040023"}


id: PBO:0054792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2205","termid":"PBO:0054792"}


id: PBO:0081643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 569","termid":"PBO:0081643"}


id: PBO:0039900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF3 antisense RNA 1","termid":"PBO:0039900"}


id: GO:0046008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}


id: PBO:0082378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic zinc-finger protein; similar to human and mouse Kin17 proteins which are chromatin-associated proteins involved in UV response and DNA replication","termid":"PBO:0082378"}


id: PBO:0006201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_localizes","termid":"PBO:0006201"}


id: GO:0018820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: urea = cyanamide + H2O.","definition_xrefs":["EC:4.2.1.69","RHEA:23056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cyanamide hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0668","KEGG_REACTION:R00778","MetaCyc:CYANAMIDE-HYDRATASE-RXN"],"synonyms":[{"name":"urea hydro-lyase (cyanamide-forming)","type":"related"},{"name":"urea hydro-lyase activity","type":"related"}],"termid":"GO:0018820"}


id: PBO:0049624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 27","termid":"PBO:0049624"}


id: GO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of B cells in the bone marrow.","definition_xrefs":["PMID:16460922","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell tolerance induction","synonyms":[{"name":"central B lymphocyte tolerance induction","type":"exact"},{"name":"central B-cell tolerance induction","type":"exact"},{"name":"central B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002510"}


id: PBO:0035975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dNTP_level","termid":"PBO:0035975"}


id: PBO:0052944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated like protein 29-1","termid":"PBO:0052944"}


id: GO:0005814
data:
  {"annotated_genes":["SJAG_00719"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85152],"is_not":false,"summary":null,"term":"GO:0005814"}]},"cv_name":"cellular_component","definition":"A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00719":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centriole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao95019936","Wikipedia:Centriole"],"synonyms":[{"name":"daughter centriole","type":"narrow"},{"name":"mother centriole","type":"narrow"}],"termid":"GO:0005814","terms_by_termid":{"GO:0005814":null}}


id: PBO:0054835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2249","termid":"PBO:0054835"}


id: GO:0010962
data:
  {"annotated_genes":["SJAG_04771","SJAG_00610","SJAG_01376","SJAG_03705","SJAG_00963","SJAG_04668","SJAG_00424","SJAG_02278","SJAG_04509","SJAG_04462","SJAG_01787","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75978,77387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[83091,87853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[83467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[98101,112882,100554,87839,86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[87859,98103,84959,90322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of glucan biosynthesis. Glucan biosynthetic processes are the chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"glucan biosynthetic process","termid":"GO:0009250"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010962","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0071477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic salinity response","termid":"GO:0042539"},{"relation_name":"is_a","term_name":"cellular response to salt stress","termid":"GO:0071472"},{"relation_name":"is_a","term_name":"cellular hypotonic response","termid":"GO:0071476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hypotonic salinity response","synonyms":[{"name":"cellular response to hypotonic salt stress","type":"exact"}],"termid":"GO:0071477"}


id: GO:0097446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, and/or maintained in, a specific location in a eisosome filament (also called linear eisosome), a filamentous cortical structure formed, in S. pombe, by the eisosome component Pil1.","definition_xrefs":["GOC:mah","PMID:22869600","GOC:vw","PMID:23722945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"},{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to eisosome filament","synonyms":[{"name":"protein localization to linear eisosome","type":"exact"}],"termid":"GO:0097446"}


id: PBO:0054262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1647","termid":"PBO:0054262"}


id: CHEBI:17634
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-glucose","termid":"CHEBI:17634"}


id: GO:0032207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"},{"relation_name":"regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"}


id: PBO:0062507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily H member 2","termid":"PBO:0062507"}


id: MOD:01143
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues and the tetrapyrrole compound 15,16-dihydrobiliverdin.","definition_xrefs":["PubMed:8420941","PubMed:1559975","PubMed:3208761","PubMed:2222853","RESID:AA0429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15,16-dihydrobiliverdin-bis-L-cysteine","synonyms":[{"name":"(16R)-8,12-bis(2-carboxyethyl)-3-[2-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-18-[(1Xi)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,7,13,17-tetramethyl-15,16-dihydrobilin-1,19(21H,24H)-dione","type":"exact"},{"name":"15,16-Dhbv","type":"exact"},{"name":"15,16-dihydrobiliverdin IXalpha","type":"exact"},{"name":"15,16-dihydrobiliverdin cysteine adduct","type":"exact"},{"name":"15,16-dihydrobiliverdin-bis-L-cysteine","type":"exact"},{"name":"3'',18'-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"3beta,18alpha-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"8,12-bis(2-carboxyethyl)-3-(2-(cysteinyl-S)-ethyl)-18-(1-(cysteinyl-S)-ethyl)-2,7,13,17-tetramethylbiladiene-ab-1,19(16H,21H)-dione","type":"exact"},{"name":"BINDING  15,16-dihydrobiliverdin (covalent; via 2 links)","type":"exact"},{"name":"DBV","type":"exact"}],"termid":"MOD:01143"}


id: GO:0102725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 24-methyldesmosterol + NADPH = campesterol + NADP.","definition_xrefs":["EC:1.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"24-methyldesmosterol reductase activity","secondary_identifiers":["MetaCyc:RXN-708"],"termid":"GO:0102725"}


id: GO:0070949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a symbiont cell, the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated cytotoxicity","termid":"GO:0070948"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"}


id: FYPO:0004935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during exit from mitosis is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during exit from mitosis","synonyms":[{"name":"decreased RNA accumulation during exit from mitosis","type":"related"},{"name":"decreased RNA level during exit from mitosis during mitotic cell cycle","type":"exact"},{"name":"decreased RNA level during exit from mitosis during vegetative growth","type":"exact"},{"name":"decreased RNA level during mitotic M/G1 transition","type":"related"},{"name":"decreased RNA level during mitotic exit","type":"exact"},{"name":"decreased transcript level during exit from mitosis","type":"exact"},{"name":"reduced RNA level during exit from mitosis","type":"exact"}],"termid":"FYPO:0004935"}


id: GO:1903683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:18394891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"},{"relation_name":"positively_regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell-cell adhesion involved in epithelium migration","synonyms":[{"name":"activation of epithelial cell-cell adhesion involved in epithelium migration","type":"narrow"},{"name":"up regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"up-regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"upregulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"}],"termid":"GO:1903683"}


id: MOD:01250
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of iodouridine monophosphate with an L-phenylalanine residue.","definition_xrefs":["Unimod:292#F","PubMed:6540775","PubMed:11567090","PubMed:11112526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodouridine monophosphate derivatized residue","termid":"MOD:00611"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodouridine monophosphate derivatized phenylalanine","synonyms":[{"name":"Cross-link of (Iodo)-uracil MP with W,F,Y","type":"related"},{"name":"IodoU-AMP","type":"related"}],"termid":"MOD:01250"}


id: GO:1903960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of anion transmembrane transport","synonyms":[{"name":"down regulation of anion transmembrane transport","type":"exact"},{"name":"down-regulation of anion transmembrane transport","type":"exact"},{"name":"downregulation of anion transmembrane transport","type":"exact"},{"name":"inhibition of anion transmembrane transport","type":"narrow"}],"termid":"GO:1903960"}


id: PBO:0043853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular retinoic acid binding protein 2","termid":"PBO:0043853"}


id: PBO:0086289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in determining mitochondrial architecture; inner membrane protein that interacts physically and genetically with the MICOS complex and is required for its integrity","termid":"PBO:0086289"}


id: GO:0060835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the specification of the oral/aboral axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor receptor beta signaling pathway involved in oral/aboral axis specification (obsolete GO:0060835)","synonyms":[{"name":"transforming growth factor receptor beta signalling pathway involved in oral/aboral axis specification","type":"exact"}],"termid":"GO:0060835"}


id: GO:1905470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of clathrin-coated pit assembly.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of clathrin-coated pit assembly (obsolete GO:1905470)","synonyms":[{"name":"activation of clathrin-coated pit assembly","type":"narrow"},{"name":"activation of clathrin-coated pit formation","type":"narrow"},{"name":"activation of coated pit assembly","type":"narrow"},{"name":"activation of coated pit formation","type":"narrow"},{"name":"positive regulation of clathrin-coated pit formation","type":"exact"},{"name":"positive regulation of coated pit assembly","type":"exact"},{"name":"positive regulation of coated pit formation","type":"exact"},{"name":"up regulation of clathrin-coated pit assembly","type":"exact"},{"name":"up regulation of clathrin-coated pit formation","type":"exact"},{"name":"up regulation of coated pit assembly","type":"exact"},{"name":"up regulation of coated pit formation","type":"exact"},{"name":"up-regulation of clathrin-coated pit assembly","type":"exact"},{"name":"up-regulation of clathrin-coated pit formation","type":"exact"},{"name":"up-regulation of coated pit assembly","type":"exact"},{"name":"up-regulation of coated pit formation","type":"exact"},{"name":"upregulation of clathrin-coated pit assembly","type":"exact"},{"name":"upregulation of clathrin-coated pit formation","type":"exact"},{"name":"upregulation of coated pit assembly","type":"exact"},{"name":"upregulation of coated pit formation","type":"exact"}],"termid":"GO:1905470"}


id: GO:0032441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophorbide a + reduced ferredoxin + 2 O2 = red chlorophyll catabolite + oxidized ferredoxin + H2O.","definition_xrefs":["PMID:14657372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","termid":"GO:0016730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pheophorbide a oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7740","RHEA:48140","EC:1.14.15.17"],"termid":"GO:0032441"}


id: GO:0019879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of peptidyl-thyronine from peptidyl-tyrosine in thyroglobulin by phenyl transfer coupled with the formation of peptidyl-dehydroalanine.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-thyronine biosynthetic process from peptidyl-tyrosine","synonyms":[{"name":"peptidyl-thyronine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-thyronine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-thyronine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0019879"}


id: GO:0016670
data:
  {"annotated_genes":["SJAG_01647","SJAG_03992","SJAG_00196","SJAG_02827","SJAG_02489"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74966,70608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"},{"annotations":[93825,105951,109840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016972"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.3.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, oxygen as acceptor","type":"exact"}],"termid":"GO:0016670","terms_by_termid":{"GO:0016971":null,"GO:0016972":null}}


id: PBO:0017001
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eighteen Interacting Centromere protein","termid":"PBO:0017001"}


id: PR:Q9C0X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16E9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.19","synonyms":[{"name":"Spom972h-SPBC16E9.19","type":"exact"}],"termid":"PR:Q9C0X2"}


id: GO:0016890
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages at specific sites within a deoxyribonucleic acid molecule by creating internal breaks.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"site-specific endodeoxyribonuclease activity, specific for altered base","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.25.-"],"termid":"GO:0016890","terms_by_termid":{"GO:1990043":null}}


id: PBO:0065388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 2","termid":"PBO:0065388"}


id: PBO:0088938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic threonine-tRNA ligase Trs1","termid":"PBO:0088938"}


id: GO:0009777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any metabolic process in which photosynthetic organisms use light energy to convert ADP to ATP without the concomitant reduction of dioxygen (O2) to water that occurs in phosphorylation.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthetic phosphorylation","synonyms":[{"name":"photosynthetic ATP synthesis","type":"narrow"}],"termid":"GO:0009777"}


id: PBO:0071021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 23","termid":"PBO:0071021"}


id: PBO:0060032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 20","termid":"PBO:0060032"}


id: PBO:0069258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 513, pseudogene","termid":"PBO:0069258"}


id: GO:0030774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + anthranilate = N-methylanthranilate + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.111","RHEA:12180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"anthranilate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00984","MetaCyc:ANTHRANILATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:anthranilate N-methyltransferase activity","type":"related"},{"name":"anthranilic acid N-methyltransferase activity","type":"related"}],"termid":"GO:0030774"}


id: PBO:0045990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 4","termid":"PBO:0045990"}


id: PATO:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A chromatic property that is the relative position of different hues or degrees of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color pattern","termid":"PATO:0000019"}


id: FYPO:0000870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation occurs to a lower extent than normal. All histone methylation may be affected, or methylation of specific sites on specific histones may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone methylation during vegetative growth","synonyms":[{"name":"decreased histone methylation during mitotic cell cycle","type":"related"},{"name":"reduced histone methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000870"}


id: PBO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 15","termid":"PBO:0050198"}


id: GO:2000811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"negatively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anoikis","synonyms":[{"name":"negative regulation of detachment induced cell death","type":"exact"},{"name":"negative regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000811"}


id: PATO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000104 osmotic response sensitivity (obsolete PATO:0000104)","termid":"PATO:0000104"}


id: GO:1903052
data:
  {"annotated_genes":["SJAG_03699","SJAG_03048","SJAG_00712","SJAG_00071","SJAG_00766","SJAG_01131","SJAG_01489","SJAG_01544","SJAG_01210","SJAG_02723","SJAG_04477","SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[67102,61324,65380,68241,67307,68790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[106820,104056,101856,112071,97646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proteolysis involved in protein catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:18307834","GOC:BHF","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"positively_regulates","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteolysis involved in protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"activation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"activation of peptidolysis involved in cellular protein catabolic process","type":"narrow"},{"name":"activation of peptidolysis involved in cellular protein catabolism","type":"narrow"},{"name":"activation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"activation of proteolysis during cellular protein catabolism","type":"related"},{"name":"activation of proteolysis involved in cellular protein catabolic process","type":"narrow"},{"name":"positive regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"positive regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"positive regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"positive regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"positive regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"positive regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"positive regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"up regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"up regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"up regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"up regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"up regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"up regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"up regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"up-regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"up-regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"up-regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"up-regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"up-regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"up-regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"up-regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"upregulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"upregulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"upregulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"upregulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"upregulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"upregulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"upregulation of proteolysis involved in cellular protein catabolic process","type":"exact"}],"termid":"GO:1903052","terms_by_termid":{"GO:0032436":null,"GO:1901800":null,"GO:1905786":null}}


id: GO:1904860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitotic DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:16849602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in mitotic DNA replication","synonyms":[{"name":"DNA anabolism involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA anabolism involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in mitotic DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in mitotic DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1904860"}


id: PBO:0066036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 5","termid":"PBO:0066036"}


id: PBO:0078186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 3-1","termid":"PBO:0078186"}


id: PBO:0058758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6882","termid":"PBO:0058758"}


id: GO:1990787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates members of the Gli protein family are activated by Hedgehog signaling.","definition_xrefs":["PMID:24311597","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"is_a","term_name":"regulation of DNA-binding transcription factor activity","termid":"GO:0051090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0023052","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"negative regulation of hh target transcription factor activity","synonyms":[{"name":"negative regulation of hedgehog target transcription factor","type":"exact"}],"termid":"GO:1990787"}


id: PBO:0047640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 3","termid":"PBO:0047640"}


id: PBO:0083957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase); synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis; required for normal cell wall structure","termid":"PBO:0083957"}


id: PBO:0012534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_morphogenesis_of","termid":"PBO:0012534"}


id: GO:0050153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-hydroxydecanoate + NAD+ = 10-oxodecanoate + H+ + NADH.","definition_xrefs":["EC:1.1.1.66","RHEA:20880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"omega-hydroxydecanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03886","MetaCyc:OMEGA-HYDROXYDECANOATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"10-hydroxydecanoate:NAD+ 10-oxidoreductase activity","type":"related"},{"name":"w-hydroxydecanoate dehydrogenase activity","type":"exact"}],"termid":"GO:0050153"}


id: PBO:0055778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lon peptidase 2, peroxisomal","termid":"PBO:0055778"}


id: PBO:0012589
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RASA1","termid":"PBO:0012589"}


id: PBO:0081801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 730","termid":"PBO:0081801"}


id: GO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"regulation of (PG)H synthase activity","type":"related"},{"name":"regulation of PG synthetase activity","type":"related"},{"name":"regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060584"}


id: PBO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; deletion mutants are viable and have elevated levels of Ty1 retrotransposition and Ty1 cDNA","termid":"PBO:0086054"}


id: GO:0052316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0098754","GO:0008150","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"phytoalexin catabolic process","synonyms":[{"name":"phytoalexin catabolism","type":"exact"}],"termid":"GO:0052316"}


id: PR:O74799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exg3 gene.","definition_xrefs":["UniProtKB:O74799","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.05","synonyms":[{"name":"Exo-1,3-beta-glucanase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-exg3","type":"exact"}],"termid":"PR:O74799"}


id: GO:0010354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a prenyl group from one compound (donor) to homogentisic acid.","definition_xrefs":["PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}


id: PBO:0014256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1 (predicted)","termid":"PBO:0014256"}


id: PBO:0005654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/UAS domain protein Ucp10 (predicted)","termid":"PBO:0005654"}


id: PBO:0053408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 343","termid":"PBO:0053408"}


id: GO:0048053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R1 and R6 pair of photoreceptors in the eye over time, from their formation to the mature structures. R1 and R6 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R1/R6 cell differentiation","termid":"GO:0048052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 development","termid":"GO:0048053"}


id: GO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulated cleavage of the developing macronuclear genome at a limited number of chromosome breakage sites (CBS). The macronuclear destined segment (MDS) sequence adjacent to the CBS (or separated from it by a BES) receives a macronuclear telomere following chromosome breakage.","definition_xrefs":["GOC:ns","PMID:15956677","PMID:25303953","PMID:32165395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed DNA elimination","termid":"GO:0031049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"programmed DNA elimination by chromosome breakage","synonyms":[{"name":"chromosome breakage","type":"related"}],"termid":"GO:0031052"}


id: GO:0099612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to or maintained in a location within an axon.","definition_xrefs":["GOC:dos","PMID:26157139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to axon","termid":"GO:0099612"}


id: PBO:0054986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2400","termid":"PBO:0054986"}


id: PBO:0027932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_glucose_starvation","termid":"PBO:0027932"}


id: PBO:0055904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 27","termid":"PBO:0055904"}


id: GO:0021683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar granular layer is generated and organized. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar granular layer development","termid":"GO:0021681"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer morphogenesis","termid":"GO:0021683"}


id: GO:0080127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit septum over time, from its formation to the mature structure. The fruit septum is a thin partition or membrane that divides a cavity or a mass of tissue in the fruit.","definition_xrefs":["GOC:dhl","PO:0005008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant septum development","termid":"GO:1905328"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit septum development","termid":"GO:0080127"}


id: PBO:0077212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 3","termid":"PBO:0077212"}


id: PBO:0079693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 1","termid":"PBO:0079693"}


id: GO:0004131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytosine + H2O = uracil + NH3.","definition_xrefs":["EC:3.5.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cytosine deaminase activity","secondary_identifiers":["RHEA:20605","MetaCyc:CYTDEAM-RXN"],"synonyms":[{"name":"cytosine aminohydrolase activity","type":"related"},{"name":"isocytosine deaminase activity","type":"related"}],"termid":"GO:0004131"}


id: PBO:0034063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kills","termid":"PBO:0034063"}


id: GO:0052118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in host environment (obsolete GO:0052118)","synonyms":[{"name":"positive energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052118"}


id: GO:0018860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + anthranilate + CoA = AMP + diphosphate + anthranilyl-CoA.","definition_xrefs":["EC:6.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"anthranilate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R00982","UM-BBD_reactionID:r0341","MetaCyc:AMINOBENZCOALIG-RXN","RHEA:10828"],"synonyms":[{"name":"2-aminobenzoate coenzyme A ligase activity","type":"related"},{"name":"2-aminobenzoate-CoA ligase activity","type":"related"},{"name":"2-aminobenzoate-coenzyme A ligase activity","type":"related"},{"name":"anthranilate--CoA ligase activity","type":"exact"},{"name":"anthranilate:CoA ligase (AMP-forming)","type":"related"},{"name":"anthraniloyl coenzyme A synthetase activity","type":"related"}],"termid":"GO:0018860"}


id: GO:0033100
data:
  {"annotated_genes":["SJAG_02629","SJAG_00545","SJAG_00411","SJAG_01009","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89362,100518,101709,103104],"is_not":false,"summary":null,"term":"GO:0033100"},{"annotations":[76397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A Gcn5-independent multisubunit complex that catalyzes the acetylation of histone H3. The budding yeast complex includes Sas3p, Taf30p, and Yng1p.","definition_xrefs":["PMID:10817755","PMID:17157260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00411":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_02165":null,"SJAG_02629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"NuA3 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033100","terms_by_termid":{"GO:0033100":null,"GO:1990467":null}}


id: GO:0055045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the antipodal cells undergo programmed cell death.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antipodal cell degeneration","termid":"GO:0055045"}


id: GO:1901715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-aminobutyric acid catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid catabolic process","termid":"GO:0009450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid catabolic process","synonyms":[{"name":"regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"regulation of GABA catabolic process","type":"exact"},{"name":"regulation of GABA catabolism","type":"exact"},{"name":"regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"regulation of gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:1901715"}


id: PBO:0066443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol saturase","termid":"PBO:0066443"}


id: GO:0007520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which non-proliferating myoblasts fuse to existing fibers or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"},{"relation_name":"part_of","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fusion","termid":"GO:0007520"}


id: GO:0002183
data:
  {"annotated_genes":["SJAG_02592","SJAG_00786","SJAG_04891","SJAG_03732","SJAG_00507","SJAG_03147","SJAG_04772","SJAG_01942","SJAG_02072","SJAG_04383","SJAG_02638","SJAG_01117","SJAG_00912","SJAG_04093","SJAG_01659","SJAG_02471","SJAG_04873","SJAG_03658","SJAG_02263","SJAG_03433","SJAG_03788","SJAG_03629","SJAG_01643","SJAG_02307","SJAG_03996","SJAG_02061","SJAG_04981","SJAG_04900","SJAG_02628","SJAG_02995","SJAG_00662","SJAG_02376","SJAG_00690","SJAG_01954","SJAG_01576","SJAG_03223","SJAG_03472","SJAG_00466","SJAG_03534","SJAG_05003","SJAG_02026","SJAG_04744","SJAG_01487","SJAG_02164","SJAG_02390","SJAG_03869","SJAG_00169","SJAG_03678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73250,83096,85408,85858,88200,92029,92587,93715,95787,98468,98644,98778,99989,100821,102212,102493,105740,109058,113459],"is_not":false,"summary":null,"term":"GO:0002183"},{"annotations":[105826,85448,106448,100816,93134,90179,93074,92214,94253,74271,71614,95390],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001732"},{"annotations":[77062,100626,71196,72915,91459,113024],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001731"},{"annotations":[86767,107260],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904689"},{"annotations":[94647,69924,72014,89767,88241,110635],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1990625"},{"annotations":[90601,98576,99215],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990611"},{"annotations":[72916,74272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"The process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational initiation","termid":"GO:0006413"},{"relation_name":"part_of","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00912":null,"SJAG_01117":null,"SJAG_01487":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01942":null,"SJAG_01954":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02072":null,"SJAG_02164":null,"SJAG_02263":null,"SJAG_02307":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03433":null,"SJAG_03472":null,"SJAG_03534":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03869":null,"SJAG_03996":null,"SJAG_04093":null,"SJAG_04383":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04873":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic translational initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0002183","terms_by_termid":{"GO:0001731":null,"GO:0001732":null,"GO:0002183":null,"GO:0002188":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null}}


id: GO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid that contributes to mitochondrial division.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial nucleoid organization involved in mitochondrial fission (obsolete GO:0090145)","synonyms":[{"name":"mitochondrial nucleoid organisation involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090145"}


id: PR:Q10088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.09 gene.","definition_xrefs":["UniProtKB:Q10088","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.09","synonyms":[{"name":"AUH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC11D3.09","type":"exact"},{"name":"agmatine ureohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10088"}


id: PBO:0072775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A4, constitutive","termid":"PBO:0072775"}


id: PBO:0001372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic alanine-tRNA ligase Ala1 (predicted)","termid":"PBO:0001372"}


id: PBO:0028036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_astral_microtubule_anchoring_at_mitotic_spindle_pole_body","termid":"PBO:0028036"}


id: PBO:0083641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile cell cortex structures associated with endocytosis; detected in phosphorylated state in mitochondria; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutant shows activation of Pkc1p/Ypk1p stress resistance pathways; member of BAR domain family; protein increases in abundance and relocalizes from plasma membrane to cytoplasm upon DNA replication stress","termid":"PBO:0083641"}


id: GO:1900634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentadecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane biosynthetic process","termid":"GO:0043447"},{"relation_name":"is_a","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadecane biosynthetic process","synonyms":[{"name":"pentadecane anabolism","type":"exact"},{"name":"pentadecane biosynthesis","type":"exact"},{"name":"pentadecane formation","type":"exact"},{"name":"pentadecane synthesis","type":"exact"}],"termid":"GO:1900634"}


id: PBO:0029212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dTTP_biosynthetic_process","termid":"PBO:0029212"}


id: PR:Q9USK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphopantothenate--cysteine ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04565","PANTHER:PTHR12290:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4B3.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.18","secondary_identifiers":["UniProtKB:Q9USK7"],"synonyms":[{"name":"Spom972h-PPCS","type":"exact"}],"termid":"PR:Q9USK7"}


id: GO:0050197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + phytanate = AMP + diphosphate + H+ + phytanoyl-CoA.","definition_xrefs":["EC:6.2.1.24","RHEA:21380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phytanate-CoA ligase activity","secondary_identifiers":["Reactome:R-HSA-389622","MetaCyc:PHYTANATE--COA-LIGASE-RXN","KEGG_REACTION:R03631"],"synonyms":[{"name":"phytanate:CoA ligase (AMP-forming)","type":"related"},{"name":"phytanoyl-CoA ligase activity","type":"related"}],"termid":"GO:0050197"}


id: PBO:0082768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; contributes to SAM complex stability","termid":"PBO:0082768"}


id: PR:O94448
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CAAX prenyl protease 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13046:SF0","OMA:SCHPO00351","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX prenyl protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.02","secondary_identifiers":["UniProtKB:O94448"],"synonyms":[{"name":"PPSEP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RCE1","type":"exact"},{"name":"prenyl protein-specific endoprotease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94448"}


id: PBO:0074836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 31","termid":"PBO:0074836"}


id: GO:1903884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-C motif) ligand 20 production.","definition_xrefs":["GOC:TermGenie","PMID:20054338","GOC:krc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 20 production","termid":"GO:0036392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"regulation of CCL-20 production","type":"exact"},{"name":"regulation of CCL20 production","type":"exact"}],"termid":"GO:1903884"}


id: PBO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-33","termid":"PBO:0051298"}


id: PR:O42911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.04","synonyms":[{"name":"Spom972h-rsm25","type":"exact"}],"termid":"PR:O42911"}


id: PBO:0028268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_multiseptate_tapered_cell","termid":"PBO:0028268"}


id: PBO:0067363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 462, pseudogene","termid":"PBO:0067363"}


id: PBO:0002653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7 (predicted)","termid":"PBO:0002653"}


id: PBO:0066081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 9","termid":"PBO:0066081"}


id: PBO:0078735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 7-1","termid":"PBO:0078735"}


id: PBO:0072249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 24","termid":"PBO:0072249"}


id: PBO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 12","termid":"PBO:0070904"}


id: GO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["ISBN:0135712254","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"cell envelope organization","termid":"GO:0043163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell outer membrane assembly","synonyms":[{"name":"cell outer membrane biogenesis","type":"related"}],"termid":"GO:0043165"}


id: PBO:0030110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_methionine_import","termid":"PBO:0030110"}


id: FYPO:0004708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the ratio of large to small ribosomal subunits present in the cytosol is lower than normal..","definition_xrefs":["PMID:26122634","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic large:small ribosomal subunit ratio","synonyms":[{"name":"decreased 60S:40S cytosolic ribosomal subunit ratio","type":"exact"},{"name":"decreased cytosolic 60S:40S ribosomal subunit ratio","type":"exact"},{"name":"decreased cytosolic large:small ribosomal subunit ratio during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic large:small ribosomal subunit ratio during vegetative growth","type":"exact"},{"name":"decreased cytosolic ribosomal large:small subunit ratio","type":"exact"},{"name":"reduced cytosolic large:small ribosomal subunit ratio","type":"exact"}],"termid":"FYPO:0004708"}


id: GO:0070601
data:
  {"annotated_genes":["SJAG_04259","SJAG_03989","SJAG_01082","SJAG_00600","SJAG_03926","SJAG_01601","SJAG_00229","SJAG_04699","SJAG_03681","SJAG_04126","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109564,110929,97068,99744,89213,103010,108865,94447,96560,108313],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[70367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051754"},{"annotations":[94449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the centromeric region of the chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"centromeric sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sister chromatid cohesion at centromere","type":"exact"}],"termid":"GO:0070601","terms_by_termid":{"GO:0051754":null,"GO:0071962":null,"GO:1990813":null}}


id: GO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}


id: GO:0075010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of germ tube formation on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"germ tube formation","termid":"GO:0075009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of germ tube formation","termid":"GO:0075010"}


id: GO:0034625
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76488,87389],"is_not":false,"summary":null,"term":"GO:0034625"}]},"cv_name":"biological_process","definition":"Elongation of a fatty acid chain into which one C-C double bond has been introduced.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation, unsaturated fatty acid","termid":"GO:0019368"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty acid elongation, monounsaturated fatty acid","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034625","terms_by_termid":{"GO:0034625":null}}


id: GO:1904203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iodide transport.","definition_xrefs":["GOC:TermGenie","PMID:20392814","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic anion transport","termid":"GO:1903793"},{"relation_name":"is_a","term_name":"regulation of iodide transport","termid":"GO:1904201"},{"relation_name":"positively_regulates","term_name":"iodide transport","termid":"GO:0015705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of iodide transport","synonyms":[{"name":"activation of iodide transport","type":"narrow"},{"name":"up regulation of iodide transport","type":"exact"},{"name":"up-regulation of iodide transport","type":"exact"},{"name":"upregulation of iodide transport","type":"exact"}],"termid":"GO:1904203"}


id: PBO:0057290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 509-2","termid":"PBO:0057290"}


id: PBO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranyltranstransferase Fps1","termid":"PBO:0000916"}


id: PBO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl leukotriene receptor 2","termid":"PBO:0044501"}


id: PBO:0060205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial E3 ubiquitin protein ligase 1","termid":"PBO:0060205"}


id: GO:1904089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of neuron apoptotic process.","definition_xrefs":["PMID:20150917","GOC:TermGenie","GOC:kmv","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron apoptotic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904089)","synonyms":[{"name":"negative regulation of neuron apoptosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of programmed cell death, neurons by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904089"}


id: GO:0031508
data:
  {"annotated_genes":["SJAG_03689","SJAG_03356","SJAG_01008","SJAG_02409","SJAG_00961","SJAG_01599","SJAG_00934","SJAG_04141","SJAG_00414","SJAG_04253","SJAG_03916","SJAG_03982","SJAG_02594","SJAG_01601","SJAG_00058","SJAG_03042","SJAG_00756","SJAG_02778","SJAG_01204","SJAG_04061","SJAG_01540","SJAG_02846","SJAG_01579","SJAG_02621","SJAG_03543","SJAG_00087","SJAG_01075","SJAG_02119","SJAG_02725","SJAG_03624","SJAG_04030","SJAG_03193","SJAG_00335","SJAG_04039","SJAG_00302","SJAG_03844","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85557,87512,88865,98035,99346,103340,104481,107214,107711,107712,107713,108375,109486],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[95592,92548],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[107312,84370,112678,101752,111014,110448,86735,94860,113751,113058,112952,89498,90717,94452,105615,105777,106318,108755,109377,84316,109631,92094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The compaction of chromatin located adjacent to the CENP-A rich centromere 'central core' and characterized by methylation of histone H3K9, into heterochromatin, resulting in the repression of transcription at pericentric DNA.","definition_xrefs":["PMID:14612388","PMID:22729156","PMID:20206496","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01008":null,"SJAG_01075":null,"SJAG_01204":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03543":null,"SJAG_03624":null,"SJAG_03689":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030702","GO:1990141"],"synonyms":[{"name":"centric heterochromatin formation","type":"related"},{"name":"centromere chromatin silencing","type":"exact"},{"name":"centromeric heterochromatin biosynthesis","type":"exact"},{"name":"centromeric heterochromatin formation","type":"exact"},{"name":"centromeric silencing","type":"exact"},{"name":"chromatin silencing at centromere","type":"exact"},{"name":"chromatin silencing at centromere outer repeat region","type":"narrow"},{"name":"chromatin silencing at pericentric region","type":"related"},{"name":"heterochromatic silencing at centromere","type":"exact"},{"name":"pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0031508","terms_by_termid":{"GO:0031508":null,"GO:0090052":null,"GO:0140727":null}}


id: GO:0008484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of a sulfuric ester bond, an ester formed from sulfuric acid, O=SO(OH)2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfuric ester hydrolase activity","secondary_identifiers":["EC:3.1.6.-"],"synonyms":[{"name":"sulfatase activity","type":"exact"},{"name":"sulphuric ester hydrolase activity","type":"exact"}],"termid":"GO:0008484"}


id: PBO:0070159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 73 pseudogene","termid":"PBO:0070159"}


id: MOD:00294
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-histidine residues, an L-serine residue and a four-iron four-sulfur cluster to bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","type":"exact"},{"name":"tetra-mu3-sulfidobis(S-cysteinyliron)(N3'-histidinoiron)(O3-serinyliron)","type":"exact"}],"termid":"MOD:00294"}


id: PR:P87147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nascent polypeptide-associated complex subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03638","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.05","secondary_identifiers":["UniProtKB:P87147"],"synonyms":[{"name":"NAC-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NACA2","type":"exact"},{"name":"alpha-NAC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87147"}


id: GO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.","definition_xrefs":["GOC:cab1","WB_REF:cgc467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermotaxis","secondary_identifiers":["Wikipedia:Thermotaxis"],"synonyms":[{"name":"taxis in response to temperature stimulus","type":"exact"}],"termid":"GO:0043052"}


id: PBO:0050839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB1 adjacent tumor promoting lncRNA","termid":"PBO:0050839"}


id: FYPO:0005355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at RTS1 barrier in the mating type region is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"abnormal site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"abnormal site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005355"}


id: GO:0031905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an early endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"early endosome lumen","termid":"GO:0031905"}


id: PBO:0053439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 384","termid":"PBO:0053439"}


id: GO:0061705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, to yield fructose-6-phosphate through both glucose and fructose intermediates.","definition_xrefs":["GOC:glycolysis","GOC:dph","PMID:15012287","MetaCyc:PWY-621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate through glucose and fructose","termid":"GO:0061705"}


id: SO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acylated.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001721 H3K27_acylation_site (obsolete SO:0001721)","synonyms":[{"name":"H3K27 acylation site","type":"exact"},{"name":"H3K27Ac","type":"related"}],"termid":"SO:0001721"}


id: GO:0009509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid containing pigments other than chlorophyll, usually yellow and orange carotenoid pigments.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromoplast","secondary_identifiers":["Wikipedia:Chromoplast"],"termid":"GO:0009509"}


id: PBO:0085658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mRNA export; component of the transcription export (TREX) complex","termid":"PBO:0085658"}


id: PBO:0036540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain Rab GDP-GTP exchange factor, unknown biological role (predicted)","termid":"PBO:0036540"}


id: PBO:0072476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 5","termid":"PBO:0072476"}


id: SO:0001190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases attached to a repeating unit made of threose rings connected to a phosphate backbone.","definition_xrefs":["CHEBI:48019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNA","termid":"SO:0001190"}


id: GO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mating type switching","synonyms":[{"name":"activation of mating type switching","type":"narrow"},{"name":"stimulation of mating type switching","type":"narrow"},{"name":"up regulation of mating type switching","type":"exact"},{"name":"up-regulation of mating type switching","type":"exact"},{"name":"upregulation of mating type switching","type":"exact"}],"termid":"GO:0031496"}


id: PBO:0046292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 2","termid":"PBO:0046292"}


id: PBO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.11.17","termid":"PBO:0001152"}


id: GO:1900149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell migration.","definition_xrefs":["GOC:sjw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"positively_regulates","term_name":"Schwann cell migration","termid":"GO:0036135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell migration","synonyms":[{"name":"activation of Schwann cell migration","type":"narrow"},{"name":"up regulation of Schwann cell migration","type":"exact"},{"name":"up-regulation of Schwann cell migration","type":"exact"},{"name":"upregulation of Schwann cell migration","type":"exact"}],"termid":"GO:1900149"}


id: PBO:0079826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ULK4 pseudogene 1","termid":"PBO:0079826"}


id: PBO:0073808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 13","termid":"PBO:0073808"}


id: GO:0102924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + gibberellin A44 + 2-oxoglutarate + O2 = gibberellin A98 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gibberellin A44,2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-886"],"termid":"GO:0102924"}


id: PBO:0027374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_transferase_activity","termid":"PBO:0027374"}


id: FYPO:0003767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of crossover junction endodeoxyribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased endodeoxyribonuclease activity","termid":"FYPO:0002037"},{"relation_name":"is_a","term_name":"abnormal crossover junction endodeoxyribonuclease activity","termid":"FYPO:0003666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0005447","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000002"],"is_obsolete":false,"name":"decreased crossover junction endodeoxyribonuclease activity","synonyms":[{"name":"reduced crossover junction endodeoxyribonuclease activity","type":"exact"}],"termid":"FYPO:0003767"}


id: GO:0019808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polyamine, an organic compound containing two or more amino groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polyamine binding","termid":"GO:0019808"}


id: PATO:0000949
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being abnormally flattened or coalesced.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciated","termid":"PATO:0000949"}


id: PBO:0063509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5 cohesin associated factor B","termid":"PBO:0063509"}


id: GO:0016463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Zn2+(in) = ADP + phosphate + Zn2+(out).","definition_xrefs":["RHEA:20621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type zinc transporter activity","secondary_identifiers":["EC:7.2.2.12","MetaCyc:RXN0-5205"],"synonyms":[{"name":"ATP phosphohydrolase (Zn2+-exporting)","type":"exact"},{"name":"P(1B)-type ATPase activity","type":"narrow"},{"name":"P1B-type ATPase activity","type":"related"},{"name":"Zn(2+)-exporting ATPase activity","type":"related"},{"name":"Zn2+-exporting ATPase activity","type":"related"},{"name":"zinc exporting ATPase activity","type":"broad"},{"name":"zinc transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"zinc-exporting ATPase activity","type":"related"},{"name":"zinc-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0016463"}


id: FYPO:0008090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic anaphase begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of mitotic anaphase B","termid":"FYPO:0008090"}


id: GO:1902423
data:
  {"annotated_genes":["SJAG_03048","SJAG_04140","SJAG_01837","SJAG_00082","SJAG_01805","SJAG_05290","SJAG_04280","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[111037,107065,100390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[111693,106312,97645,89220,85504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation.","definition_xrefs":["GOC:TermGenie","PMID:22065639","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"is_a","term_name":"regulation of metaphase plate congression","termid":"GO:0090235"},{"relation_name":"regulates","term_name":"attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0051315"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"regulation of attachment of mitotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"regulation of mitotic attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"regulation of mitotic bipolar attachment","type":"related"}],"termid":"GO:1902423","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null}}


id: PBO:0075822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcospan","termid":"PBO:0075822"}


id: PBO:0003513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein Dni2 (predicted)","termid":"PBO:0003513"}


id: PBO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose residue biosynthesis protein Pvg2","termid":"PBO:0002324"}


id: FYPO:0002567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNAs transcribed from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcripts during vegetative growth","type":"exact"},{"name":"normal accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"normal centromeric outer repeat transcript accumulation","type":"related"},{"name":"normal centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"normal level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0002567"}


id: PR:000050595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A microtubule protein alp7 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-50, Ser-51, Thr-100, Thr-116, and Thr-131 of the amino acid sequence represented by UniProtKB:Q9URY2. Example: UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047.","definition_xrefs":["PRO:DAN","PMID:24790093","PomBase:MLR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule protein alp7 (Schizosaccharomyces pombe)","termid":"PR:000050514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alp7/Phos:(S50,S51,T100,T116,T131)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"Spom-alp7/Phos:2","type":"exact"},{"name":"UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047","type":"narrow"},{"name":"alp7/Phos:(S50,S51,T100,T116,T131)","type":"exact"}],"termid":"PR:000050595"}


id: GO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The fraction of cells, prepared by disruptive biochemical methods, that is enriched for plasma membranes.","definition_xrefs":["PMID:15601832","PMID:11562363","GOC:mgi_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane enriched fraction (obsolete GO:0001950)","synonyms":[{"name":"PME fraction","type":"related"},{"name":"plasma membrane enriched fraction","type":"exact"}],"termid":"GO:0001950"}


id: PBO:0088729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Did2","termid":"PBO:0088729"}


id: PBO:0066319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabenosyn, RAB effector","termid":"PBO:0066319"}


id: PBO:0028866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mRNA_level_during_vegetative_growth","termid":"PBO:0028866"}


id: PBO:0053555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 562","termid":"PBO:0053555"}


id: PBO:0091884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm7","termid":"PBO:0091884"}


id: PBO:0058797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7703","termid":"PBO:0058797"}


id: PBO:0084399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lumazine synthase (DMRL synthase); catalyzes synthesis of immediate precursor to riboflavin; DMRL synthase stands for 6,7-dimethyl-8-ribityllumazine synthase","termid":"PBO:0084399"}


id: GO:0023023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MHC protein complex binding","termid":"GO:0023023"}


id: GO:0103015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Kdo)2-lipid A + 2 4-amino-4-deoxy-alpha-L-arabinopyranosyl di-trans,poly-cis-undecaprenyl phosphate = (beta-L-Ara4N)2-(KDO)2-lipid A + 2 ditrans,polycis-undecaprenyl phosphate.","definition_xrefs":["EC:2.4.2.43","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-amino-4-deoxy-L-arabinose transferase activity","secondary_identifiers":["RHEA:35371","MetaCyc:RXN0-2001"],"termid":"GO:0103015"}


id: PBO:0040257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 12","termid":"PBO:0040257"}


id: PBO:0070122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 36 pseudogene","termid":"PBO:0070122"}


id: GO:0102834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:0-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:8066133","PMID:7948918","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-18:1-2-16:0-monogalactosyldiacylglycerol acyl-lipid omega-6 desaturase activity","secondary_identifiers":["EC:1.14.19.23","MetaCyc:RXN-8294"],"termid":"GO:0102834"}


id: PBO:0048056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 5","termid":"PBO:0048056"}


id: PATO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000906 f1 sterile (obsolete PATO:0000906)","synonyms":[{"name":"F1 infertile","type":"related"}],"termid":"PATO:0000906"}


id: PBO:0030490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_succinate_import","termid":"PBO:0030490"}


id: MOD:00013
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-aspartic acid.","definition_xrefs":["PubMed:8089117","PubMed:9582379","PubMed:5764436","ChEBI:29958","PubMed:6692818","RESID:AA0004","PubMed:4399050","PubMed:9521123","DeltaMass:0","PubMed:1097438","PubMed:339692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid residue","synonyms":[{"name":"(2S)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"Asp","type":"exact"},{"name":"L-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:00013"}


id: PBO:0075983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"statherin","termid":"PBO:0075983"}


id: PBO:0025494
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile Refsum disease","termid":"PBO:0025494"}


id: PBO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 22","termid":"PBO:0047369"}


id: GO:0039641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer of a virion contained inside the protein capsid.","definition_xrefs":["GOC:bm","PMID:15331712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral membrane","termid":"GO:0036338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner membrane","synonyms":[{"name":"virion inner membrane","type":"exact"}],"termid":"GO:0039641"}


id: PR:Q9P7Q7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.08","synonyms":[{"name":"Spom972h-mak1","type":"exact"},{"name":"his-Asp phosphorelay kinase phk3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q7"}


id: PBO:0018169
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latrunculin sensitive gamma subunit","termid":"PBO:0018169"}


id: PBO:0084779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; involved in protein refolding after import into mitochondria","termid":"PBO:0084779"}


id: PBO:0051736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS6 antisense RNA 1","termid":"PBO:0051736"}


id: GO:0140315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an iron ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:27780864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"iron ion sequestering activity","termid":"GO:0140315"}


id: PBO:0061711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 6","termid":"PBO:0061711"}


id: GO:1905490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory neuron axon guidance.","definition_xrefs":["GOC:TermGenie","PMID:16516839","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon guidance","termid":"GO:1902668"},{"relation_name":"is_a","term_name":"regulation of sensory neuron axon guidance","termid":"GO:1905489"},{"relation_name":"negatively_regulates","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory neuron axon guidance","synonyms":[{"name":"down regulation of sensory neuron axon guidance","type":"exact"},{"name":"down-regulation of sensory neuron axon guidance","type":"exact"},{"name":"downregulation of sensory neuron axon guidance","type":"exact"},{"name":"inhibition of sensory neuron axon guidance","type":"narrow"}],"termid":"GO:1905490"}


id: GO:0010988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of low-density lipoprotein particle clearance. Low-density lipoprotein particle clearance is the process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"low-density lipoprotein particle clearance","termid":"GO:0034383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of low-density lipoprotein particle clearance","termid":"GO:0010988"}


id: GO:1902559
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"}]},"cv_name":"biological_process","definition":"The process in which 3'-phospho-5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-phosphoadenosine 5'-phosphosulfate transport","termid":"GO:0046963"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"3'-phospho-5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902559","terms_by_termid":{"GO:1990554":null}}


id: PBO:0044703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 4","termid":"PBO:0044703"}


id: MOD:00554
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 202 was merged with entry 195, remap to MOD:00548. modification from Unimod Chemical derivative","definition_xrefs":["Unimod:202"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00554 APTA-d0 with no neutral loss (obsolete MOD:00554)","termid":"MOD:00554"}


id: GO:0090596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:kmv","ISBN:978-0199210893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ morphogenesis","termid":"GO:0090596"}


id: GO:0102703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (-)-camphene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"camphene synthase activity","secondary_identifiers":["RHEA:25484","MetaCyc:RXN-5142"],"termid":"GO:0102703"}


id: FYPO:0004283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oxanine DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal oxanine DNA N-glycosylase activity","termid":"FYPO:0004283"}


id: PBO:0047591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGGY divergent transcript","termid":"PBO:0047591"}


id: GO:2000627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of miRNA catabolic process","synonyms":[{"name":"positive regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000627"}


id: PBO:0034379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lumen_of","termid":"PBO:0034379"}


id: PBO:0050755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 17","termid":"PBO:0050755"}


id: GO:0061061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a muscle structure over time, from its formation to its mature state. Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle structure development","termid":"GO:0061061"}


id: GO:1900050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone exchange (obsolete GO:1900050)","synonyms":[{"name":"down regulation of histone chaperone","type":"related"},{"name":"down regulation of histone exchange","type":"related"},{"name":"down regulation of histone replacement","type":"exact"},{"name":"down-regulation of histone chaperone","type":"related"},{"name":"down-regulation of histone exchange","type":"related"},{"name":"down-regulation of histone replacement","type":"exact"},{"name":"downregulation of histone chaperone","type":"related"},{"name":"downregulation of histone exchange","type":"related"},{"name":"downregulation of histone replacement","type":"exact"},{"name":"inhibition of histone chaperone","type":"related"},{"name":"inhibition of histone exchange","type":"related"},{"name":"inhibition of histone replacement","type":"exact"},{"name":"negative regulation of histone chaperone","type":"related"},{"name":"negative regulation of histone replacement","type":"exact"}],"termid":"GO:1900050"}


id: GO:0052114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The responsive adjustment of an organism to the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation to host pH environment (obsolete GO:0052114)","synonyms":[{"name":"adaptation to host pH environment","type":"exact"},{"name":"pH tolerance to host environment","type":"exact"}],"termid":"GO:0052114"}


id: PBO:0076378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAB3 antisense RNA 2","termid":"PBO:0076378"}


id: PBO:0018191
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Neuromyotonia","termid":"PBO:0018191"}


id: PBO:0065188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROX1 antisense RNA 1","termid":"PBO:0065188"}


id: FYPO:0002455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position or morphology of all or part of the septum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal septum","termid":"FYPO:0004292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal septum during vegetative growth","synonyms":[{"name":"abnormal septum during mitotic cell cycle","type":"related"},{"name":"abnormal septum physical object quality during vegetative growth","type":"exact"}],"termid":"FYPO:0002455"}


id: PBO:0077617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 8","termid":"PBO:0077617"}


id: SO:1000119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000119 sequence_variant_causing_inactive_ligand_binding_site (obsolete SO:1000119)","synonyms":[{"name":"mutation causing inactive ligand binding site","type":"related"},{"name":"sequence variant causing inactive ligand binding site","type":"exact"}],"termid":"SO:1000119"}


id: GO:0005666
data:
  {"annotated_genes":["SJAG_02600","SJAG_00637","SJAG_01444","SJAG_02070","SJAG_03921","SJAG_00731","SJAG_04408","SJAG_02101","SJAG_04934","SJAG_03181","SJAG_04261","SJAG_01313","SJAG_04161","SJAG_03761","SJAG_03035","SJAG_00619","SJAG_01765"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70121,70829,70948,71115,72741,73614,74140,74294,74461,74797,75362,75579,75870,77959,78207,88437,107474],"is_not":false,"summary":null,"term":"GO:0005666"}]},"cv_name":"cellular_component","definition":"RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02600":null,"SJAG_03035":null,"SJAG_03181":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase III complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase III activity","type":"related"},{"name":"DNA-directed RNA polymerase III complex","type":"exact"}],"termid":"GO:0005666","terms_by_termid":{"GO:0005666":null}}


id: GO:0048783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyanophore differentiation","termid":"GO:0048781"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyanophore differentiation","synonyms":[{"name":"activation of cyanophore differentiation","type":"narrow"},{"name":"stimulation of cyanophore differentiation","type":"narrow"},{"name":"up regulation of cyanophore differentiation","type":"exact"},{"name":"up-regulation of cyanophore differentiation","type":"exact"},{"name":"upregulation of cyanophore differentiation","type":"exact"}],"termid":"GO:0048783"}


id: _global:ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_during","secondary_identifiers":["RO:0002093"],"termid":"_global:ends_during"}


id: PBO:0059423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium transporter MRS2","termid":"PBO:0059423"}


id: GO:1904186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly ofa post-anaphase microtubule array.","definition_xrefs":["PMID:15004232","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anaphase microtubule array organization","synonyms":[{"name":"PAA organization","type":"exact"},{"name":"post-anaphase array organization","type":"exact"},{"name":"post-anaphase microtubule array organisation","type":"exact"}],"termid":"GO:1904186"}


id: PBO:0065612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 6","termid":"PBO:0065612"}


id: GO:0090409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonate + ATP + coenzyme A = malonyl-CoA + AMP + diphosphate.","definition_xrefs":["RHEA:32139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"},{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malonyl-CoA synthetase activity","secondary_identifiers":["MetaCyc:RXN-12359","EC:6.2.1.76"],"termid":"GO:0090409"}


id: GO:0015779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucuronosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucuronosides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of glucuronate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glucuronoside transport","synonyms":[{"name":"glucuronide transport","type":"exact"}],"termid":"GO:0015779"}


id: PBO:0064768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase H pseudogene 2","termid":"PBO:0064768"}


id: PBO:0040461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A3 divergent transcript","termid":"PBO:0040461"}


id: GO:0005648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, beta-subunit (obsolete GO:0005648)","synonyms":[{"name":"importin, beta-subunit","type":"exact"},{"name":"karyopherin-beta1","type":"exact"}],"termid":"GO:0005648"}


id: PR:O60106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14F5.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and RING finger protein C14F5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.10c","synonyms":[{"name":"Spom972h-SPBC14F5.10c","type":"exact"}],"termid":"PR:O60106"}


id: GO:0140769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + tetradecanoyl-[ACP] = H+ + holo-[ACP] + N(6)-tetradecanoyl-L-lysyl-[protein].","definition_xrefs":["PMID:32461253","RHEA:70611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ACP-dependent peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0140769"}


id: FYPO:0004533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal beta-glucan level","termid":"FYPO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall beta-glucan level","synonyms":[{"name":"normal cell wall beta-D-glucan level","type":"exact"},{"name":"normal cell wall beta-glucan accumulation","type":"related"},{"name":"normal cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall beta-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004533"}


id: FYPO:0007918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA 3' end processing is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}


id: PBO:0031132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_upon_G0_to_G1_transition","termid":"PBO:0031132"}


id: GO:0007195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by dopamine binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0007195"}


id: GO:0015993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of molecular hydrogen (H2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete molecular hydrogen transport (obsolete GO:0015993)","termid":"GO:0015993"}


id: PBO:0087358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor that reanneals snRNPs during spliceosome recycling; reanneals U4 and U6 snRNPs","termid":"PBO:0087358"}


id: PBO:0061922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 2 pseudogene","termid":"PBO:0061922"}


id: _global:has_end_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"_global:has_part_that_occurs_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_location","secondary_identifiers":["RO:0002232"],"termid":"_global:has_end_location"}


id: GO:0020030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protrusion that develops in the plasma membrane of a parasitized erythrocyte. An example of this component is found in Plasmodium species.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"infected host cell surface knob","termid":"GO:0020030"}


id: GO:0098897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the spine apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine apparatus membrane","termid":"GO:0098897"}


id: PBO:0078296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-1","termid":"PBO:0078296"}


id: PBO:0013118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Spf38","termid":"PBO:0013118"}


id: PBO:0076189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 4","termid":"PBO:0076189"}


id: GO:0030276
data:
  {"annotated_genes":["SJAG_02177","SJAG_04565","SJAG_01748","SJAG_02282","SJAG_04644","SJAG_00104","SJAG_05296","SJAG_00152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60381,66582,68394,73076,78159,78165],"is_not":false,"summary":null,"term":"GO:0030276"},{"annotations":[73052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032050"},{"annotations":[75583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032051"}]},"cv_name":"molecular_function","definition":"Binding to a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.","definition_xrefs":["ISBN:0198506732","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00152":null,"SJAG_01748":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_04565":null,"SJAG_04644":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"clathrin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0030276","terms_by_termid":{"GO:0030276":null,"GO:0032050":null,"GO:0032051":null}}


id: PBO:0051663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innate immunity activator","termid":"PBO:0051663"}


id: PBO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDRF1 antisense RNA 1","termid":"PBO:0045804"}


id: GO:0010368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages. Isoamylases in plants are intracellular and probably chloroplast localized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoamylase complex","termid":"GO:0043033"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"chloroplast isoamylase complex","termid":"GO:0010368"}


id: SO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_acetylation_site","synonyms":[{"name":"H3K27 acetylation site","type":"exact"},{"name":"H3K27ac","type":"exact"}],"termid":"SO:0002049"}


id: PBO:0063546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet and endothelial cell adhesion molecule 1","termid":"PBO:0063546"}


id: GO:0046951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Biosynthesis involves the formation of hydroxymethylglutaryl-CoA, which is cleaved to acetate and acetyl-CoA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"cellular ketone body metabolic process","termid":"GO:0046950"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"ketone body biosynthetic process","synonyms":[{"name":"ketone body anabolism","type":"exact"},{"name":"ketone body biosynthesis","type":"exact"},{"name":"ketone body formation","type":"exact"},{"name":"ketone body synthesis","type":"exact"}],"termid":"GO:0046951"}


id: PBO:0089522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid reductase","termid":"PBO:0089522"}


id: PBO:0080063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32","termid":"PBO:0080063"}


id: PBO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell","termid":"PBO:0030010"}


id: GO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R3/R4 photoreceptors commit to their cell fate. R3 and R4 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"},{"relation_name":"part_of","term_name":"R3/R4 cell differentiation","termid":"GO:0048056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"R3/R4 cell fate commitment","termid":"GO:0007464"}


id: PBO:0065246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 18","termid":"PBO:0065246"}


id: PBO:0078454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 6 (pseudogene)","termid":"PBO:0078454"}


id: PBO:0086147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal prospore membrane formation; interacts with Gip1p, which is the meiosis-specific regulatory subunit of the Glc7p protein phosphatase; expressed specifically in spores and localizes to the prospore membrane; YSW1 has a paralog, SPO21, that arose from the whole genome duplication","termid":"PBO:0086147"}


id: GO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the lung. The proximal/distal axis of the lung is defined by a line that runs from the trachea to the alveoli.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal axis specification","termid":"GO:0009946"},{"relation_name":"is_a","term_name":"lung pattern specification process","termid":"GO:0060432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung proximal/distal axis specification","termid":"GO:0061115"}


id: PBO:0082980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic type 2C protein phosphatase (PP2C); identified as a high-copy number suppressor of cnb1 mpk1 synthetic lethality; overexpression decreases high-osmolarity induced Hog1p phosphorylation and kinase activity","termid":"PBO:0082980"}


id: PBO:0018075
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae DCP1","termid":"PBO:0018075"}


id: GO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophanamide + H2O = L-tryptophan + NH4.","definition_xrefs":["EC:3.5.1.57","RHEA:11012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"tryptophanamidase activity","secondary_identifiers":["KEGG_REACTION:R00682","MetaCyc:TRYPTOPHANAMIDASE-RXN"],"synonyms":[{"name":"L-tryptophan aminopeptidase","type":"broad"},{"name":"L-tryptophanamide amidohydrolase activity","type":"related"},{"name":"tryptophan aminopeptidase","type":"broad"}],"termid":"GO:0050365"}


id: PBO:0027739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip_during_cellular_response_to_salt_stress","termid":"PBO:0027739"}


id: PBO:0034466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0034466"}


id: GO:0160039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when the biogenic amine serotonin has been bound by the channel complex or one of its constituent parts. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["PMID:11100728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"serotonin-gated chloride channel activity","secondary_identifiers":["Wikipedia:Ligand-gated_ion_channel","TC:1.A.9"],"termid":"GO:0160039"}


id: PBO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase","termid":"PBO:0005582"}


id: PBO:0042183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 3","termid":"PBO:0042183"}


id: PBO:0078219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 9","termid":"PBO:0078219"}


id: FYPO:0004093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering is normal (i.e. indistinguishable from wild type). Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["PomBase:mah","GO:0045141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic telomere clustering","synonyms":[{"name":"normal bouquet formation","type":"exact"}],"termid":"FYPO:0004093"}


id: PBO:0079505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 3","termid":"PBO:0079505"}


id: GO:0060369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the Fc receptor mediated stimulatory signaling pathway.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060368"},{"relation_name":"positively_regulates","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","synonyms":[{"name":"positive regulation of Fc receptor mediated stimulatory signalling pathway","type":"exact"}],"termid":"GO:0060369"}


id: PBO:0046184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 3","termid":"PBO:0046184"}


id: GO:0052886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + a quinone = 7,9,9'-tri-cis-neurosporene + a quinol.","definition_xrefs":["RHEA:30959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"9,9'-dicis-carotene:quinone oxidoreductase activity","secondary_identifiers":["EC:1.3.5.6","KEGG_REACTION:R09656","MetaCyc:RXN-11356"],"synonyms":[{"name":"9,9'-di-cis-zeta-carotene desaturase activity","type":"broad"},{"name":"ZDS activity","type":"broad"},{"name":"zeta-carotene desaturase activity","type":"broad"}],"termid":"GO:0052886"}


id: GO:0062127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid primary amide metabolic process","termid":"GO:0062126"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid primary amide catabolic process","synonyms":[{"name":"primary fatty amide catabolic process","type":"exact"}],"termid":"GO:0062127"}


id: PBO:0058295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4669","termid":"PBO:0058295"}


id: FYPO:0005642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome biorientation is abnormal during meiosis, with chromosomes that are not correctly oriented with the kinetochores facing outwards. Homologous chromosome biorientation is the process in which the sister centromeres of one chromosome attach to microtubules that emanate from the same spindle pole, ensuring that homologous maternal and paternal chromosomes are pulled in opposite directions at anaphase of meiosis I.","definition_xrefs":["PMID:21920317","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic homologous chromosome biorientation","termid":"FYPO:0003177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic homologous chromosome biorientation with abnormal kinetochore orientation","synonyms":[{"name":"abnormal homologous chromosome biorientation with abnormal kinetochore orientation during meiosis","type":"exact"},{"name":"abnormal homologous chromosome orientation involved in meiotic metaphase I plate congression with abnormal kinetochore orientation","type":"exact"},{"name":"abnormal meiotic homologous chromosome biorientation with abnormal kinetochore position","type":"exact"}],"termid":"FYPO:0005642"}


id: PATO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001003 relative alternation value (obsolete PATO:0001003)","termid":"PATO:0001003"}


id: PBO:0047344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 2","termid":"PBO:0047344"}


id: GO:2000081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway modulating the rate or frequency of pancreatic B cell proliferation.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of canonical Wnt signaling pathway","termid":"GO:0090263"},{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation","termid":"GO:2000079"},{"relation_name":"positively_regulates","term_name":"canonical Wnt signaling pathway involved in regulation of type B pancreatic cell proliferation","termid":"GO:0044343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation","synonyms":[{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:2000081"}


id: PBO:0079770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 3","termid":"PBO:0079770"}


id: PBO:0070936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 44","termid":"PBO:0070936"}


id: PBO:0062599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 9 pseudogene","termid":"PBO:0062599"}


id: PBO:0042483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH8 antisense RNA 1","termid":"PBO:0042483"}


id: GO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. The larva is the early, immature form of an that at birth or hatching is fundamentally unlike its parent and must metamorphose before assuming the adult characters.","definition_xrefs":["GOC:jid","ISBN:0877795088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval development","termid":"GO:0002164"}


id: PBO:0072819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMD12 antisense RNA 1","termid":"PBO:0072819"}


id: GO:0140680
data:
  {"annotated_genes":["SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112735],"is_not":false,"summary":null,"term":"GO:0140680"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a di- or a monomethyl-lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:20531378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K36 demethylase activity","termid":"GO:0051864"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0032452","GO:0003674","GO:0003824","GO:0140096","GO:0016491"],"is_obsolete":false,"name":"histone H3K36me/H3K36me2 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.14.11.27","MetaCyc:RXN-8661","RHEA:42032"],"synonyms":[{"name":"histone H3-di/monomethyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3K36me demethylase activity","type":"related"},{"name":"histone H3K36me2 demethylase activity","type":"broad"}],"termid":"GO:0140680","terms_by_termid":{"GO:0140680":null}}


id: PBO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 5","termid":"PBO:0050188"}


id: GO:0006056
data:
  {"annotated_genes":["SJAG_01021","SJAG_01276","SJAG_04316","SJAG_01264","SJAG_00816","SJAG_04906","SJAG_04770","SJAG_02519","SJAG_01491","SJAG_03082","SJAG_00598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76720,83076,77991,75832,78697,71610,88449,99338,73825,73918,76145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01491":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04316":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannoprotein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mannoprotein metabolism","type":"exact"}],"termid":"GO:0006056","terms_by_termid":{"GO:0000032":null}}


id: PBO:0067421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 539, pseudogene","termid":"PBO:0067421"}


id: PR:000027610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated at least on the last Thr residue within the TQxSQx(6)TQ motif. Phosphorylated by Rad3 and Tel1. UniProtKB:Q9P7T4-1, Thr-645, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:14585996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC694.06c","synonyms":[{"name":"Spom-mrc1/Phos:1","type":"exact"}],"termid":"PR:000027610"}


id: PBO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis14","termid":"PBO:0001891"}


id: PBO:0088580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, glutamate/glycine","termid":"PBO:0088580"}


id: GO:0052688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + AMP + diphosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.","definition_xrefs":["KEGG_REACTION:R06515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (AMP-forming) activity","synonyms":[{"name":"3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052688"}


id: GO:0045999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of ecdysteroid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid secretion","termid":"GO:0007555"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of ecdysteroid secretion","synonyms":[{"name":"down regulation of ecdysteroid secretion","type":"exact"},{"name":"down-regulation of ecdysteroid secretion","type":"exact"},{"name":"downregulation of ecdysteroid secretion","type":"exact"},{"name":"inhibition of ecdysteroid secretion","type":"narrow"}],"termid":"GO:0045999"}


id: PBO:0091472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose alpha-glucosidase Suc2","termid":"PBO:0091472"}


id: PBO:0030102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_citrulline_level","termid":"PBO:0030102"}


id: PBO:0077515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 231","termid":"PBO:0077515"}


id: PBO:0031510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_in_response_to_nitrogen_starvation","termid":"PBO:0031510"}


id: PBO:0082918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c1 heme lyase; involved in maturation of cytochrome c1, which is a subunit of the mitochondrial ubiquinol-cytochrome-c reductase; links heme covalently to apocytochrome c1; human homolog HCCS can complement yeast cyt2 null mutant","termid":"PBO:0082918"}


id: PBO:0039284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 13, pseudogene","termid":"PBO:0039284"}


id: PATO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porosity","termid":"PATO:0000973"}


id: FYPO:0000350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology during vegetative growth","termid":"FYPO:0000352"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal actin cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"actin cytoskeleton morphology: abnormal","type":"related"}],"termid":"FYPO:0000350"}


id: PATO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000554 cold sensitive (obsolete PATO:0000554)","termid":"PATO:0000554"}


id: PR:O13743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos1 gene.","definition_xrefs":["UniProtKB:O13743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.08","synonyms":[{"name":"Spom972h-pos1","type":"exact"}],"termid":"PR:O13743"}


id: GO:0048818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"is_a","term_name":"positive regulation of hair follicle development","termid":"GO:0051798"},{"relation_name":"positively_regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair follicle maturation","synonyms":[{"name":"activation of hair follicle maturation","type":"narrow"},{"name":"stimulation of hair follicle maturation","type":"narrow"},{"name":"up regulation of hair follicle maturation","type":"exact"},{"name":"up-regulation of hair follicle maturation","type":"exact"},{"name":"upregulation of hair follicle maturation","type":"exact"}],"termid":"GO:0048818"}


id: PBO:0031814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_autophagy","termid":"PBO:0031814"}


id: GO:0034750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant), the tumor suppressor protein adenomatous polyposis coli (APC), and beta-catenin; may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Scrib-APC-beta-catenin complex","synonyms":[{"name":"hScrib-APC-beta-catenin complex","type":"narrow"}],"termid":"GO:0034750"}


id: PBO:0046590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 32, envelope","termid":"PBO:0046590"}


id: PBO:0053512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 500","termid":"PBO:0053512"}


id: PBO:0029277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin_ligase_activity_during_mitotic_metaphase","termid":"PBO:0029277"}


id: GO:0036510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alpha-1,2-linked mannose from the C-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:20065073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of terminal mannose on C branch","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8C(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8C","type":"related"},{"name":"glycoprotein mannose trimming on C branch","type":"exact"}],"termid":"GO:0036510"}


id: _global:during_which_starts
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_starts","secondary_identifiers":["RO:0002088"],"termid":"_global:during_which_starts"}


id: PBO:0053362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 269","termid":"PBO:0053362"}


id: PBO:0079626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 N pseudogene 1","termid":"PBO:0079626"}


id: GO:0045623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T-helper cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043371"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper cell differentiation","synonyms":[{"name":"down regulation of T-helper cell differentiation","type":"exact"},{"name":"down-regulation of T-helper cell differentiation","type":"exact"},{"name":"downregulation of T-helper cell differentiation","type":"exact"},{"name":"inhibition of T-helper cell differentiation","type":"narrow"},{"name":"negative regulation of T-helper cell development","type":"related"}],"termid":"GO:0045623"}


id: GO:0031647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that affects the structure and integrity of a protein, altering the likelihood of its degradation or aggregation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein stability","termid":"GO:0031647"}


id: PBO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mad2-dependent checkpoint response","termid":"PBO:0000285"}


id: PBO:0071585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 1","termid":"PBO:0071585"}


id: PR:P35669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutathione synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01184","PRO:DNx","PANTHER:PTHR11130:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.04","secondary_identifiers":["UniProtKB:P35669"],"synonyms":[{"name":"GSH synthetase large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-S (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GSS","type":"exact"},{"name":"glutathione synthase large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phytochelatin synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P35669"}


id: PBO:0050856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2 pseudogene 1","termid":"PBO:0050856"}


id: PBO:0030239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_basal_transcription_from_CDRE_promoter_(obsolete_FYPO:0001459)","termid":"PBO:0030239"}


id: GO:0010378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the circadian clock maintains robust and accurate timing over a broad range of physiological temperatures. The circadian clock is an endogenous 24-h timer found in most eukaryotes and in photosynthetic bacteria. The clock drives rhythms in the physiology, biochemistry, and metabolism of the organisms.","definition_xrefs":["PMID:16617099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature compensation of the circadian clock","synonyms":[{"name":"regulation of the circadian clock by temperature","type":"related"}],"termid":"GO:0010378"}


id: PBO:0025545
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate metabolism disorder","termid":"PBO:0025545"}


id: PBO:0045505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin sialophosphoprotein","termid":"PBO:0045505"}


id: RO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction).","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_developmental_potential_involving","termid":"RO:0002384"}


id: PATO:0000636
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally ventral structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventralized","termid":"PATO:0000636"}


id: PBO:0087152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in perinuclear mRNP quality control; involved in perinuclear mRNP quality control via the turnover of aberrant, unprocessed pre-mRNAs; interacts with subunits of THO/TREX, TREX-2, and RNA polymerase II; contains a PIN (PilT N terminus) domain","termid":"PBO:0087152"}


id: GO:0003143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"},{"relation_name":"part_of","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube morphogenesis","termid":"GO:0003143"}


id: GO:0032255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a secretory granule is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of vesicle location","termid":"GO:0051655"},{"relation_name":"part_of","term_name":"secretory granule localization","termid":"GO:0032252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of secretory granule location","synonyms":[{"name":"maintenance of secretory granule localization","type":"related"}],"termid":"GO:0032255"}


id: GO:0031690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adrenergic receptor binding","synonyms":[{"name":"adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031690"}


id: GO:0140638
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small heterodimeric protein complex that is required during early maturation of nascent 40S ribosomal subunits. The complex has endonuclease activity, it interacts with the small ribosomal subunit pre-rRNA and cleave it it to produce the mature 18S (or small ribosomal subunit) rRNA. In S. cerevisiae it is composed of Rcl1p and Bms1p.","definition_xrefs":["PMID:21849504","GOC:lnp","PMID:25064857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"small ribosomal subunit processing complex","synonyms":[{"name":"small ribosomal subunit maturation complex","type":"related"}],"termid":"GO:0140638"}


id: SO:0001163
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter motif with consensus sequence TCATTCG.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR1_motif","synonyms":[{"name":"DMp3","type":"exact"},{"name":"INR1 motif","type":"exact"},{"name":"directional motif p3","type":"exact"},{"name":"directional promoter motif 3","type":"exact"}],"termid":"SO:0001163"}


id: PBO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B3","termid":"PBO:0046428"}


id: PBO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell-less 2, spermatogenesis associated","termid":"PBO:0048762"}


id: PBO:0067715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 13","termid":"PBO:0067715"}


id: PR:O94508
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An intron-binding protein aquarius that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02638","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.02","secondary_identifiers":["UniProtKB:O94508"],"synonyms":[{"name":"Spom972h-AQR","type":"exact"},{"name":"complexed with cdc5 protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94508"}


id: SO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the resulting polypeptide structure.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3D_polypeptide_structure_variant","synonyms":[{"name":"3D polypeptide structure variant","type":"exact"}],"termid":"SO:0001599"}


id: GO:0070278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"part_of","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"extracellular matrix constituent secretion","synonyms":[{"name":"ECM constituent secretion","type":"exact"},{"name":"ECM secretion","type":"exact"}],"termid":"GO:0070278"}


id: PBO:0043289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 7A","termid":"PBO:0043289"}


id: PR:Q9USL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04432","PANTHER:PTHR22839:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C18B5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.10c","secondary_identifiers":["UniProtKB:Q9USL1"],"synonyms":[{"name":"Spom972h-THOC3","type":"exact"}],"termid":"PR:Q9USL1"}


id: PBO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rhp57","termid":"PBO:0001348"}


id: PBO:0063672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 1","termid":"PBO:0063672"}


id: PBO:0040417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 2","termid":"PBO:0040417"}


id: GO:0043978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group to a lysine residue at position 9 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K9 acetylation (obsolete GO:0043978)","synonyms":[{"name":"histone H2A acetylation at K9","type":"exact"}],"termid":"GO:0043978"}


id: PBO:0036227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_telomere_during_vegetative_growth","termid":"PBO:0036227"}


id: PBO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 5","termid":"PBO:0070448"}


id: GO:0016201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism recognizes chemorepellent signals that inhibit its growth toward the source.","definition_xrefs":["GOC:mah","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"synaptic target recognition","termid":"GO:0008039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic target inhibition","termid":"GO:0016201"}


id: GO:0070127
data:
  {"annotated_genes":["SJAG_00653","SJAG_01352","SJAG_02428","SJAG_01797","SJAG_02977","SJAG_04094","SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[102406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[113020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[72359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[72538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[71225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[93012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"}]},"cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00653":null,"SJAG_01352":null,"SJAG_01797":null,"SJAG_02428":null,"SJAG_02977":null,"SJAG_04094":null,"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0140053","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA aminoacylation for mitochondrial protein translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070127","terms_by_termid":{"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070183":null,"GO:0070185":null}}


id: PBO:0046116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2","termid":"PBO:0046116"}


id: PBO:0036365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Ptr1","termid":"PBO:0036365"}


id: MOD:00579
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionaldehyde +40","synonyms":[{"name":"Delta:H(4)C(3)","type":"related"},{"name":"Propionaldehyde +40","type":"related"}],"termid":"MOD:00579"}


id: GO:0048684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of collateral sprouting of an intact axon as a result of injury to an axon.","definition_xrefs":["GOC:jid","GOC:lm","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of intact axon in response to injury","termid":"GO:0048683"},{"relation_name":"positively_regulates","term_name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting of intact axon in response to injury","synonyms":[{"name":"activation of collateral sprouting of intact axon in response to injury","type":"narrow"},{"name":"stimulation of collateral sprouting of intact axon in response to injury","type":"narrow"},{"name":"up regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"up-regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"upregulation of collateral sprouting of intact axon in response to injury","type":"exact"}],"termid":"GO:0048684"}


id: PBO:0062191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily Q member 3","termid":"PBO:0062191"}


id: PR:Q9UTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyridoxine-5'-phosphate oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01911","PRO:DNx","PANTHER:PTHR10851:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.02","secondary_identifiers":["UniProtKB:Q9UTQ1"],"synonyms":[{"name":"PNP/PMP oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PNPOx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNPO","type":"exact"}],"termid":"PR:Q9UTQ1"}


id: PBO:0027910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_mitotic_S_phase","termid":"PBO:0027910"}


id: PBO:0017631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator Whi2","termid":"PBO:0017631"}


id: PBO:0055539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2975","termid":"PBO:0055539"}


id: PBO:0073461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein B","termid":"PBO:0073461"}


id: PBO:0086073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; periodically expressed during the yeast metabolic cycle; phosphorylated in vitro by the mitotic exit network (MEN) kinase complex, Dbf2p/Mob1p","termid":"PBO:0086073"}


id: GO:1900840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"}


id: PR:O14261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taz1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.04","synonyms":[{"name":"Spom972h-atg11","type":"exact"},{"name":"autophagy-related protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytoplasm to vacuole targeting protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein taf1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14261"}


id: PBO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 1","termid":"PBO:0045233"}


id: FYPO:0007389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement in mitotic interphase takes place at an abnormal angle relative to the long axis of the cell. Normally, the SPB oscillation angle remains nearly parallel to the long axis.","definition_xrefs":["PomBase:mah","PMID:18495844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal angle of spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abnormal angle of SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abnormal angle of spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal angle of spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"increased angle of spindle pole body-led chromosome movement during mitotic interphase","type":"narrow"},{"name":"increased trajectory angle of SPB oscillation","type":"related"},{"name":"spindle pole body-led chromosome movement during mitotic interphase at abnormal angle","type":"exact"}],"termid":"FYPO:0007389"}


id: PBO:0081947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 2 pseudogene 1","termid":"PBO:0081947"}


id: FYPO:0006291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G2 phase of the mitotic cell cycle is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein level during mitotic G2 phase","synonyms":[{"name":"increased protein accumulation during mitotic G2 phase","type":"related"},{"name":"increased protein level during G2 phase of mitotic cell cycle","type":"related"},{"name":"increased protein level during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006291"}


id: GO:0051287
data:
  {"annotated_genes":["SJAG_00281","SJAG_03562","SJAG_00234","SJAG_02313","SJAG_02176","SJAG_00235","SJAG_04186","SJAG_02135","SJAG_04039","SJAG_01075","SJAG_03828","SJAG_03903","SJAG_00409","SJAG_06622","SJAG_01012","SJAG_06621","SJAG_00502","SJAG_01432","SJAG_02945","SJAG_00636","SJAG_01137","SJAG_00027","SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89393,91725,93500,95074,96320,100067,100304,101388,101702,104559,104560,104561,104562,104563,104564,104565,110810,111916,113456,113716],"is_not":false,"summary":null,"term":"GO:0051287"},{"annotations":[76096,71917,70677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070403"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00235":null,"SJAG_00281":null,"SJAG_00409":null,"SJAG_00502":null,"SJAG_00636":null,"SJAG_01012":null,"SJAG_01075":null,"SJAG_01137":null,"SJAG_01432":null,"SJAG_02135":null,"SJAG_02176":null,"SJAG_02313":null,"SJAG_02945":null,"SJAG_03562":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04362":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NAD binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051288"],"synonyms":[{"name":"NAD or NADH binding","type":"related"},{"name":"NAD+ or NADH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0051287","terms_by_termid":{"GO:0051287":null,"GO:0070403":null}}


id: PBO:0080251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 14 pseudogene","termid":"PBO:0080251"}


id: GO:0034946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-isopropylbut-3-enoyl-CoA + H2O = 3-isopropylbut-3-enoic acid + CoASH.","definition_xrefs":["UM-BBD_reactionID:r0994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3-isopropylbut-3-enoyl-CoA thioesterase activity","termid":"GO:0034946"}


id: MOD:01378
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a (2S,3R,4R)-4,5-dihydroxyisoleucine.","definition_xrefs":["PubMed:11805306","RESID:AA0449","ChEBI:141826","PubMed:18552824","PubMed:363352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated isoleucine","termid":"MOD:01416"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4R)-4,5-dihydroxyisoleucine","synonyms":[{"name":"(2S,3R,4R)-2-amino-4,5-dihydroxy-3-methylpentanoic acid","type":"exact"},{"name":"(2S,3R,4R)-4,5-dihydroxyisoleucine","type":"exact"},{"name":"(3R,4R)-4,5-dihydroxyisoleucine","type":"exact"},{"name":"MOD_RES (3R,4R)-4,5-dihydroxyisoleucine","type":"exact"},{"name":"gamma,delta-dihydroxyisoleucine","type":"exact"}],"termid":"MOD:01378"}


id: GO:0097267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which arachidonic acid is converted to other compounds initially by omega-hydroxylation.","definition_xrefs":["PMID:10681399","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid metabolic process","termid":"GO:0019369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"omega-hydroxylase P450 pathway","synonyms":[{"name":"P450 omega-hydroxylase pathway","type":"exact"}],"termid":"GO:0097267"}


id: GO:0035569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The trimethylation of the N-terminal proline of proteins to form the derivative N,N,N-trimethylproline.","definition_xrefs":["PMID:20668449"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline trimethylation (obsolete GO:0035569)","synonyms":[{"name":"N-terminal peptidyl-proline trimethylation","type":"exact"}],"termid":"GO:0035569"}


id: PBO:0079101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed basic protein 1","termid":"PBO:0079101"}


id: PBO:0029639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_TPCK","termid":"PBO:0029639"}


id: GO:0061589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a population of phosphatidylserine molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet as a result of a calcium stimulus.","definition_xrefs":["PMID:23532839","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium activated phospholipid scrambling","termid":"GO:0061588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"calcium activated phosphatidylserine scrambling","termid":"GO:0061589"}


id: PBO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 2","termid":"PBO:0044473"}


id: PBO:0089133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADH kinase","termid":"PBO:0089133"}


id: PBO:0004352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepiapterin reductase (predicted)","termid":"PBO:0004352"}


id: GO:0048223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Network composed of hemicelluloses; members of a class of plant cell wall polysaccharide that cannot be extracted from the wall by hot water or chelating agents, but can be extracted by aqueous alkali. Includes xylan, glucuronoxylan, arabinoxylan, arabinogalactan II, glucomannan, xyloglucan and galactomannan.","definition_xrefs":["GOC:jid","DOI:10.1016/j.foodchem.2008.11.065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"hemicellulose network","termid":"GO:0048223"}


id: PBO:0080933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor","termid":"PBO:0080933"}


id: PBO:0050476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A4","termid":"PBO:0050476"}


id: PBO:0084697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial external NADH dehydrogenase; type II NAD(P)H:quinone oxidoreductase that catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p provide cytosolic NADH to the mitochondrial respiratory chain; NDE1 has a paralog, NDE2, that arose from the whole genome duplication","termid":"PBO:0084697"}


id: GO:0009402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin resistance (obsolete GO:0009402)","synonyms":[{"name":"toxin resistance","type":"exact"}],"termid":"GO:0009402"}


id: PBO:0043470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 2","termid":"PBO:0043470"}


id: PBO:0072006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 8","termid":"PBO:0072006"}


id: PBO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 192","termid":"PBO:0042120"}


id: GO:0034117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one erythrocyte to one or more other erythrocytes via adhesion molecules.","definition_xrefs":["GOC:add","PMID:14631543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"erythrocyte aggregation","synonyms":[{"name":"RBC aggregation","type":"exact"},{"name":"red blood cell aggregation","type":"exact"}],"termid":"GO:0034117"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: PR:Q9UTR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp3 gene.","definition_xrefs":["UniProtKB:Q9UTR7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.04c","synonyms":[{"name":"Spom972h-mcp3","type":"exact"},{"name":"meiotically up-regulated gene 7 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTR7"}


id: GO:1990661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a S100A8 dimer and capable of binding to toll-like receptor 4 (TLR4).","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"S100A8 complex","synonyms":[{"name":"S100A8 homodimer","type":"exact"}],"termid":"GO:1990661"}


id: GO:1903260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mating projection tip.","definition_xrefs":["PMID:11952834","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mating projection tip","synonyms":[{"name":"protein localisation in mating projection tip","type":"exact"},{"name":"protein localisation to mating projection tip","type":"exact"},{"name":"protein localization in mating projection tip","type":"exact"},{"name":"protein localization to conjugation tube tip","type":"narrow"},{"name":"protein localization to shmoo tip","type":"narrow"}],"termid":"GO:1903260"}


id: GO:2001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipoxin A4 metabolic process","synonyms":[{"name":"LXA4 metabolic process","type":"exact"},{"name":"LXA4 metabolism","type":"exact"},{"name":"lipoxin A4 metabolism","type":"exact"}],"termid":"GO:2001302"}


id: PBO:0109842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily H member 1","termid":"PBO:0109842"}


id: PBO:0050034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 2 (pseudogene)","termid":"PBO:0050034"}


id: GO:0044775
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcomplex of the DNA polymerase III holoenzyme which is responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication. The complex is homodimeric in prokaryotes, and homotrimeric in other species.","definition_xrefs":["UniProt:O73947","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase processivity factor complex","termid":"GO:0044796"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase III, beta sliding clamp processivity factor complex","termid":"GO:0044775"}


id: PBO:0034124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spatially_coextensive_with","termid":"PBO:0034124"}


id: PBO:0065202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF31 antisense RNA 1","termid":"PBO:0065202"}


id: GO:0097601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retina homeostatic process preventing the degeneration of a retina blood vessel.","definition_xrefs":["PMID:23093773","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina blood vessel maintenance","synonyms":[{"name":"maintenance of choriocapillaris","type":"narrow"},{"name":"maintenance of retina blood vessel","type":"exact"},{"name":"maintenance of retinal blood vessel","type":"exact"}],"termid":"GO:0097601"}


id: GO:0045937
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"positively_regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of phosphate metabolic process","type":"narrow"},{"name":"positive regulation of phosphate metabolism","type":"exact"},{"name":"stimulation of phosphate metabolic process","type":"narrow"},{"name":"up regulation of phosphate metabolic process","type":"exact"},{"name":"up-regulation of phosphate metabolic process","type":"exact"},{"name":"upregulation of phosphate metabolic process","type":"exact"}],"termid":"GO:0045937","terms_by_termid":{"GO:1905857":null}}


id: GO:0018420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via N6-(L-isoaspartyl)-L-lysine (obsolete GO:0018420)","termid":"GO:0018420"}


id: PBO:0075814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 4","termid":"PBO:0075814"}


id: PBO:0047745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 9","termid":"PBO:0047745"}


id: FYPO:0001779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is abnormal. Centromere-kinetochore complexes normally cluster near the old spindle pole body during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere localization","termid":"FYPO:0001778"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal centromere clustering at nuclear periphery","secondary_identifiers":["FYPO:0001780"],"synonyms":[{"name":"abnormal centromere clustering at SPB","type":"related"},{"name":"abnormal centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal centromere clustering at nuclear periphery during mitotic cell cycle","type":"exact"},{"name":"abnormal centromere clustering at nuclear periphery during vegetative growth","type":"exact"},{"name":"abnormal centromere clustering at old mitotic spindle pole body","type":"related"},{"name":"abnormal centromere clustering at spindle pole body","type":"related"},{"name":"abnormal centromere-SPB clustering","type":"related"},{"name":"abnormal kinetochore clustering at SPB","type":"related"},{"name":"abnormal kinetochore clustering at old mitotic spindle pole body","type":"related"},{"name":"abnormal kinetochore clustering at spindle pole body","type":"related"},{"name":"abnormal kinetochore localization at spindle pole body","type":"related"},{"name":"abnormal kinetochores to spindle pole body clustering","type":"related"},{"name":"abnormal mitotic centromere clustering at nuclear periphery","type":"exact"},{"name":"mislocalized, scattered centromeres","type":"related"},{"name":"unclustered kinetochores","type":"related"}],"termid":"FYPO:0001779"}


id: GO:0043438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetoacetic acid, 3-oxobutanoic acid; the empirical formula is C4H6O3 or CH3COCH2COOH.","definition_xrefs":["Wikipedia:Acetoacetic_acid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"acetoacetic acid metabolic process","synonyms":[{"name":"acetoacetate metabolism","type":"exact"},{"name":"acetoacetic acid metabolism","type":"exact"},{"name":"3-oxobutanoate metabolic process","type":"exact"},{"name":"3-oxobutanoate metabolism","type":"exact"},{"name":"3-oxobutanoic acid metabolic process","type":"exact"},{"name":"3-oxobutanoic acid metabolism","type":"exact"},{"name":"acetoacetate metabolic process","type":"exact"},{"name":"beta ketobutyric acid metabolic process","type":"exact"},{"name":"beta ketobutyric acid metabolism","type":"exact"},{"name":"beta-ketobutyric acid metabolic process","type":"exact"},{"name":"beta-ketobutyric acid metabolism","type":"exact"},{"name":"diacetic acid metabolic process","type":"exact"},{"name":"diacetic acid metabolism","type":"exact"}],"termid":"GO:0043438"}


id: SO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is transcribed. This region may cover the transcript of a gene, it may emcompas the sequence covered by all of the transcripts of a alternately spliced gene, or it may cover the region transcribed by a polycistronic transcript. A gene may have 1 or more transcribed regions and a transcribed_region may belong to one or more genes.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000502 transcribed_region (obsolete SO:0000502)","termid":"SO:0000502"}


id: GO:0090676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of a low voltage-gated calcium channel.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:20371816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium ion transmembrane transport via low voltage-gated calcium channel","synonyms":[{"name":"generation of T-type calcium current","type":"related"}],"termid":"GO:0090676"}


id: GO:0070267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in swelling of the cell body, and that is morphologically characteristic of necrotic cell death.","definition_xrefs":["PMID:17873035","PMID:18846107"],"gene_count":0,"genotype_count":0,"name":"obsolete oncosis (obsolete GO:0070267)","termid":"GO:0070267"}


id: GO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the nasopharyngeal-associated lymphoid tissue (NALT).","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction in gut-associated lymphoid tissue","termid":"GO:0002394"},{"relation_name":"is_a","term_name":"immune response in nasopharyngeal-associated lymphoid tissue","termid":"GO:0002395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in nasopharyngeal-associated lymphoid tissue","synonyms":[{"name":"nasal tolerance","type":"related"},{"name":"tolerance induction in NALT","type":"exact"}],"termid":"GO:0002400"}


id: GO:0031570
data:
  {"annotated_genes":["SJAG_04140","SJAG_04671","SJAG_01680","SJAG_03160","SJAG_03048","SJAG_01677","SJAG_01873","SJAG_00327","SJAG_01084","SJAG_01044","SJAG_00169","SJAG_01146","SJAG_03695","SJAG_02266","SJAG_01429","SJAG_00364","SJAG_02098","SJAG_00429","SJAG_02771","SJAG_00486","SJAG_01708","SJAG_05373","SJAG_02026","SJAG_00640","SJAG_03927","SJAG_01010","SJAG_02074","SJAG_03026","SJAG_00623","SJAG_04332","SJAG_04287","SJAG_01855","SJAG_03898","SJAG_02576","SJAG_04280","SJAG_01076","SJAG_03720","SJAG_02563","SJAG_01205","SJAG_01605","SJAG_03942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[111089,86885,101815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[88980,109532,78362,111033,106308,111263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[89373,112260,77455,94510,107140,71667,94670,70933,86886,112101,104473,101818,95820,111091,74100,111814,77833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[86766,104821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[86887,112691,85716,87239,71668,95821,112019,101819,74357,94671,77887,84651,106835,96339,104474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[77886,84695,89940,94511,96146,84652,97624,101820,102859,94672,111093,85938,77687,73652,86888,77453,107142,106836,91389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and progresses through signal transduction and ends with cell cycle effector processes.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072401"],"synonyms":[{"name":"DNA integrity checkpoint","type":"exact"},{"name":"signal transduction involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0031570","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0033315":null,"GO:0044773":null,"GO:0044778":null}}


id: PBO:0047274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group A","termid":"PBO:0047274"}


id: GO:0072042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell proliferation and contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell proliferation","termid":"GO:1902460"},{"relation_name":"regulates","term_name":"mesenchymal stem cell proliferation involved in nephron morphogenesis","termid":"GO:0072090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell proliferation involved in nephron morphogenesis","termid":"GO:0072042"}


id: GO:1902184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of shoot apical meristem development.","definition_xrefs":["GOC:TermGenie","PMID:21496644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of shoot apical meristem development","termid":"GO:1902183"},{"relation_name":"negatively_regulates","term_name":"shoot apical meristem development","termid":"GO:1902182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of shoot apical meristem development","synonyms":[{"name":"down regulation of SAM development","type":"exact"},{"name":"down regulation of primary shoot meristem development","type":"related"},{"name":"down regulation of promeristem development","type":"broad"},{"name":"down regulation of shoot apical meristem development","type":"exact"},{"name":"down-regulation of SAM development","type":"exact"},{"name":"down-regulation of primary shoot meristem development","type":"related"},{"name":"down-regulation of promeristem development","type":"broad"},{"name":"down-regulation of shoot apical meristem development","type":"exact"},{"name":"downregulation of SAM development","type":"exact"},{"name":"downregulation of primary shoot meristem development","type":"related"},{"name":"downregulation of promeristem development","type":"broad"},{"name":"downregulation of shoot apical meristem development","type":"exact"},{"name":"inhibition of SAM development","type":"exact"},{"name":"inhibition of primary shoot meristem development","type":"related"},{"name":"inhibition of promeristem development","type":"broad"},{"name":"inhibition of shoot apical meristem development","type":"narrow"},{"name":"negative regulation of SAM development","type":"exact"},{"name":"negative regulation of primary shoot meristem development","type":"related"},{"name":"negative regulation of promeristem development","type":"broad"}],"termid":"GO:1902184"}


id: PR:O74361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.04 gene.","definition_xrefs":["UniProtKB:O74361","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C28E12.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.04","synonyms":[{"name":"Spom972h-SPBC28E12.04","type":"exact"}],"termid":"PR:O74361"}


id: GO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["PMID:16429326","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 6-kinase activity","termid":"GO:0000831"}


id: PBO:0013793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-R/borderline right","termid":"PBO:0013793"}


id: PBO:0054664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2070","termid":"PBO:0054664"}


id: PBO:0050683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 10","termid":"PBO:0050683"}


id: GO:0044109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, occurring at the level of the individual cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular alcohol catabolic process (obsolete GO:0044109)","termid":"GO:0044109"}


id: GO:0009381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid at sites flanking regions of damaged DNA to which the Uvr ABC excinuclease complexes bind.","definition_xrefs":["GOC:mah","PMID:15192705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"excinuclease ABC activity","termid":"GO:0009381"}


id: PBO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat","termid":"PBO:0000328"}


id: PBO:0070030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1327, pseudogene","termid":"PBO:0070030"}


id: PR:P79064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-activating enzyme subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10953:SF30","OMA:SCHPO00484","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage tolerance protein rad31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4C5.04","secondary_identifiers":["UniProtKB:P79064"],"synonyms":[{"name":"Spom972h-SAE1","type":"exact"}],"termid":"PR:P79064"}


id: PBO:0053713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 922","termid":"PBO:0053713"}


id: GO:0016464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate; drives the transport of proteins into the chloroplast stroma.","definition_xrefs":["EC:7.4.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-transporting ATPase activity","termid":"GO:0015450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140318","GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"chloroplast protein-transporting ATPase activity","secondary_identifiers":["MetaCyc:3.6.3.52-RXN"],"synonyms":[{"name":"AAA chloroplast protein-transporting ATPase","type":"exact"},{"name":"ATPase-coupled chloroplast protein transporter activity","type":"exact"}],"termid":"GO:0016464"}


id: PBO:0074852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 41","termid":"PBO:0074852"}


id: PBO:0061472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding protein 1","termid":"PBO:0061472"}


id: PBO:0066202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 3","termid":"PBO:0066202"}


id: PBO:0087972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trifunctional enzyme of thiamine biosynthesis, degradation and salvage; has hydroxymethylpyrimidine (HMP) kinase, HMP-phosphate (HMP-P) kinase and thiaminase activities; member of a gene family with THI21 and THI22; HMP and HMP-P kinase activity redundant with Thi21p","termid":"PBO:0087972"}


id: FYPO:0003982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of disulfide oxidoreductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal disulfide oxidoreductase activity","termid":"FYPO:0003982"}


id: GO:0015247
data:
  {"annotated_genes":["SJAG_01945","SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107596,94781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Enables the transfer of aminophospholipids from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"aminophospholipid flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminophospholipid transmembrane transporter activity","type":"related"},{"name":"aminophospholipid transporter activity","type":"related"}],"termid":"GO:0015247","terms_by_termid":{"GO:0140346":null}}


id: GO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within voluntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the voluntary skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and it is under voluntary control. Voluntary skeletal muscle is skeletal muscle that is under conscious control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}


id: PBO:0004024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating enzyme Ulp1","termid":"PBO:0004024"}


id: MOD:00094
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine amide.","definition_xrefs":["PubMed:7149738","RESID:AA0085","PubMed:1892838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine amide","synonyms":[{"name":"(2R)-2-amino-3-sulfanylpropanamide","type":"exact"},{"name":"2-amino-3-mercaptopropanamide","type":"exact"},{"name":"CysN","type":"exact"},{"name":"L-cysteine amide","type":"exact"},{"name":"MOD_RES Cysteine amide","type":"exact"},{"name":"amidated L-cysteine","type":"exact"},{"name":"cysteinamide","type":"exact"}],"termid":"MOD:00094"}


id: SO:1000109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000109 mutation_causing_out_of_frame_polypeptide_C_terminal_elongation (obsolete SO:1000109)","synonyms":[{"name":"mutation causing out of frame polypeptide C terminal elongation","type":"exact"},{"name":"out of frame polypeptide C-terminal elongation","type":"exact"}],"termid":"SO:1000109"}


