# terms

id: PBO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptin family","termid":"PBO:0000491"}


id: PBO:0109022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 2","termid":"PBO:0109022"}


id: PBO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc4 (predicted)","termid":"PBO:0000653"}


id: PBO:0042998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromogranin A","termid":"PBO:0042998"}


id: PBO:0049851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hdc homolog, cell cycle regulator","termid":"PBO:0049851"}


id: PBO:0055903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 26","termid":"PBO:0055903"}


id: GO:0035496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,5 alpha-D-galactosyl-lipopolysaccharide.","definition_xrefs":["PMID:11304545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide-1,5-galactosyltransferase activity","synonyms":[{"name":"LPS-1,5-galactosyltransferase activity","type":"exact"},{"name":"UDP-D-galactose:(glucosyl)lipopolysaccharide-1,5-D-galactosyltransferase","type":"exact"}],"termid":"GO:0035496"}


id: FYPO:0003851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on MTT","synonyms":[{"name":"normal cell population growth in presence of MTT","type":"exact"},{"name":"normal cell population growth on MTT","type":"exact"},{"name":"normal cellular response to MTT","type":"related"},{"name":"normal growth on 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide","type":"exact"},{"name":"normal vegetative cell population growth on MTT","type":"exact"}],"termid":"FYPO:0003851"}


id: PBO:0075700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREK1 interacting protein 1","termid":"PBO:0075700"}


id: PBO:0045846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 36","termid":"PBO:0045846"}


id: PBO:0052728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 20","termid":"PBO:0052728"}


id: GO:0047368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + UDP-N-acetyl-D-galactosamine 4-sulfate = adenosine 3',5'-diphosphate + H+ + UDP-N-acetyl-D-galactosamine 4,6-disulfate.","definition_xrefs":["RHEA:14337","EC:2.8.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine-4-sulfate sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R04476","MetaCyc:2.8.2.7-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:UDP-N-acetyl-D-galactosamine-4-sulfate 6-sulfotransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-4-sulphate sulphotransferase activity","type":"exact"},{"name":"uridine diphospho-N-acetylgalactosamine 4-sulfate sulfotransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine 4-sulfate sulfotransferase activity","type":"related"}],"termid":"GO:0047368"}


id: PBO:0084789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; likely involved in translation of the mitochondrial OLI1 mRNA; exhibits genetic interaction with the OLI1 mRNA 5'-untranslated leader","termid":"PBO:0084789"}


id: GO:0015603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an iron chelate from one side of a membrane to the other. An iron chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:17660286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}


id: PBO:0055173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2597","termid":"PBO:0055173"}


id: FYPO:0007341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K4me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007341"}


id: MOD:00079
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-methyl-L-asparagine.","definition_xrefs":["Unimod:34#N","PubMed:3782095","PubMed:11875433","OMSSA:75","PubMed:2356973","RESID:AA0070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated asparagine","termid":"MOD:00673"},{"relation_name":"is_a","term_name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N4-methyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-N4-methylbutanediamic acid","type":"exact"},{"name":"MOD_RES N4-methylasparagine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(gamma)-methylasparagine","type":"exact"},{"name":"N-methylasparagine","type":"exact"},{"name":"N4-methyl-L-asparagine","type":"exact"},{"name":"N4-methylated L-asparagine","type":"exact"},{"name":"N4Me1Asn","type":"exact"},{"name":"beta-aspartyl methylamide","type":"exact"},{"name":"beta-methylasparagine","type":"related"},{"name":"methyln","type":"exact"}],"termid":"MOD:00079"}


id: GO:1901649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actomyosin contractile ring localization (obsolete GO:1901649)","termid":"GO:1901649"}


id: PBO:0061040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 1","termid":"PBO:0061040"}


id: GO:1902110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of mitochondrial membrane permeability that is involved in apoptotic process.","definition_xrefs":["GOC:pm","PMID:19168129","GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902108"},{"relation_name":"is_a","term_name":"mitochondrial outer membrane permeabilization involved in programmed cell death","termid":"GO:1902686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of mitochondrial membrane permeability involved in apoptotic process","synonyms":[{"name":"mitochondrial membrane permeability transition involved in apoptosis","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in apoptotic cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in apoptotic process","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in apoptotic program","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in programmed cell death by apoptosis","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in signaling (initiator) caspase activity","type":"related"},{"name":"mitochondrial membrane permeability transition involved in type I programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in apoptosis","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in apoptotic cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in apoptotic process","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in apoptotic program","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in programmed cell death by apoptosis","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in signaling (initiator) caspase activity","type":"related"},{"name":"mitochondrial membrane permeabilization involved in type I programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in apoptosis","type":"narrow"},{"name":"mitochondrial permeability transition involved in apoptotic cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in apoptotic process","type":"narrow"},{"name":"mitochondrial permeability transition involved in apoptotic program","type":"narrow"},{"name":"mitochondrial permeability transition involved in apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in programmed cell death by apoptosis","type":"narrow"},{"name":"mitochondrial permeability transition involved in signaling (initiator) caspase activity","type":"related"},{"name":"mitochondrial permeability transition involved in type I programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in apoptosis","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in apoptotic cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in apoptotic program","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in apoptotic programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in programmed cell death by apoptosis","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in signaling (initiator) caspase activity","type":"related"},{"name":"positive regulation of mitochondrial membrane permeability involved in type I programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in apoptosis","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in apoptotic cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in apoptotic process","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in apoptotic program","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in apoptotic programmed cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in programmed cell death by apoptosis","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in signaling (initiator) caspase activity","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in type I programmed cell death","type":"narrow"}],"termid":"GO:1902110"}


id: GO:0006155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosine deaminase reaction (obsolete GO:0006155)","synonyms":[{"name":"adenosine deaminase reaction","type":"exact"}],"termid":"GO:0006155"}


id: GO:2000744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of anterior head development","termid":"GO:2000742"},{"relation_name":"positively_regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior head development","termid":"GO:2000744"}


id: PBO:0005202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase P5 type (predicted)","termid":"PBO:0005202"}


id: PBO:0076367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 4, pseudogene","termid":"PBO:0076367"}


id: PR:Q9US07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11937:SF13","OMA:SCHPO00696","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.02c","secondary_identifiers":["UniProtKB:Q9US07"],"synonyms":[{"name":"Spom972h-ACTR8","type":"exact"}],"termid":"PR:Q9US07"}


id: PBO:0055912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 36","termid":"PBO:0055912"}


id: GO:1900832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-leucine.","definition_xrefs":["PMID:10918062","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucine catabolic process","termid":"GO:0006552"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-leucine metabolic process","termid":"GO:1900831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-leucine catabolic process","synonyms":[{"name":"D-leucine breakdown","type":"exact"},{"name":"D-leucine catabolism","type":"exact"},{"name":"D-leucine degradation","type":"exact"}],"termid":"GO:1900832"}


id: PBO:0064914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 3","termid":"PBO:0064914"}


id: PBO:0045938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A3","termid":"PBO:0045938"}


id: PBO:0038803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM7 antisense RNA 2","termid":"PBO:0038803"}


id: PBO:0064565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraoxonase 3","termid":"PBO:0064565"}


id: PBO:0012224
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RAD3","termid":"PBO:0012224"}


id: PBO:0109473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_residue","termid":"PBO:0109473"}


id: PBO:0038748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin family pseudogene 1","termid":"PBO:0038748"}


id: GO:0033053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glutamine, the D-enantiomer of the amino acid glutamine, i.e. (2R)-2,5-diamino-5-oxopentanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-glutamine metabolic process","synonyms":[{"name":"D-glutamine metabolism","type":"exact"}],"termid":"GO:0033053"}


id: PBO:0071260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 5","termid":"PBO:0071260"}


id: PBO:0078062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 52","termid":"PBO:0078062"}


id: FYPO:0003531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which peroxisome size is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal peroxisome size","synonyms":[{"name":"normal peroxisome size during mitotic cell cycle","type":"related"},{"name":"normal peroxisome size during vegetative growth","type":"exact"}],"termid":"FYPO:0003531"}


id: PBO:0052253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCTD21 antisense RNA 1","termid":"PBO:0052253"}


id: PBO:0005215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid Pmp31","termid":"PBO:0005215"}


id: GO:0043517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043516"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction by p53 class mediator","termid":"GO:1901798"},{"relation_name":"positively_regulates","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator","type":"narrow"},{"name":"positive regulation of p53 induced by DNA damage response","type":"exact"},{"name":"stimulation of DNA damage response, signal transduction by p53 class mediator","type":"narrow"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"}],"termid":"GO:0043517"}


id: PBO:0058569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-1","termid":"PBO:0058569"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: PBO:0029912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_sterol_level","termid":"PBO:0029912"}


id: GO:0090447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-CoA + sn-glycerol 3-phosphate = CoA + a 2-acyl-sn-glycerol 3-phosphate.","definition_xrefs":["RHEA:33559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate 2-O-acyltransferase activity","secondary_identifiers":["EC:2.3.1.198"],"termid":"GO:0090447"}


id: PBO:0075973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD13 intronic transcript 1","termid":"PBO:0075973"}


id: PR:Q9UUC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crs103 gene.","definition_xrefs":["UniProtKB:Q9UUC2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C365.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.01","synonyms":[{"name":"Spom972h-crs103","type":"exact"}],"termid":"PR:Q9UUC2"}


id: PBO:0083941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl cyclotransferase; cleaves the gamma-glutamyl bond of glutathione to yield 5-oxoproline and a Cys-Gly dipeptide; similar to mammalian pro-apoptotic protein ChaC1; expression of mouse ChaC1 in yeast increases apoptosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; periodically expressed during the metabolic cycle","termid":"PBO:0083941"}


id: PATO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000540 flooding sensitivity value (obsolete PATO:0000540)","termid":"PATO:0000540"}


id: PBO:0003735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit Ctu2","termid":"PBO:0003735"}


id: PBO:0074276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRA stem-loop interacting RNA binding protein","termid":"PBO:0074276"}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: FYPO:0005750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Zeocin (phleomycin D1). Cells stop growing (and may die) at a concentration of Zeocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to Zeocin","synonyms":[{"name":"hypersensitive to Zeocin","type":"exact"},{"name":"sensitive to Zeocin during mitotic cell cycle","type":"related"},{"name":"sensitive to Zeocin during vegetative growth","type":"exact"},{"name":"sensitive to phleomycin D1","type":"exact"}],"termid":"FYPO:0005750"}


id: GO:1900260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA-directed 5'-3' RNA polymerase activity.","definition_xrefs":["GOC:pf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of RNA-dependent RNA polymerase activity","termid":"GO:1900259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA-dependent RNA polymerase activity","synonyms":[{"name":"down regulation of PB1 proteins","type":"related"},{"name":"down regulation of PB2 proteins","type":"related"},{"name":"down regulation of RDRP","type":"related"},{"name":"down regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"down regulation of RNA replicase activity","type":"exact"},{"name":"down regulation of RNA synthetase activity","type":"related"},{"name":"down regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"down regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"down regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"down regulation of phage f2 replicase","type":"narrow"},{"name":"down regulation of polymerase L","type":"related"},{"name":"down regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"down regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"down regulation of ribonucleic replicase activity","type":"exact"},{"name":"down regulation of ribonucleic synthetase activity","type":"related"},{"name":"down regulation of transcriptase","type":"broad"},{"name":"down-regulation of PB1 proteins","type":"related"},{"name":"down-regulation of PB2 proteins","type":"related"},{"name":"down-regulation of RDRP","type":"related"},{"name":"down-regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"down-regulation of RNA replicase activity","type":"exact"},{"name":"down-regulation of RNA synthetase activity","type":"related"},{"name":"down-regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"down-regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"down-regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down-regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"down-regulation of phage f2 replicase","type":"narrow"},{"name":"down-regulation of polymerase L","type":"related"},{"name":"down-regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"down-regulation of ribonucleic synthetase activity","type":"related"},{"name":"down-regulation of transcriptase","type":"broad"},{"name":"downregulation of PB1 proteins","type":"related"},{"name":"downregulation of PB2 proteins","type":"related"},{"name":"downregulation of RDRP","type":"related"},{"name":"downregulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"downregulation of RNA replicase activity","type":"exact"},{"name":"downregulation of RNA synthetase activity","type":"related"},{"name":"downregulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"downregulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"downregulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"downregulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"downregulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"downregulation of phage f2 replicase","type":"narrow"},{"name":"downregulation of polymerase L","type":"related"},{"name":"downregulation of ribonucleic acid replicase activity","type":"exact"},{"name":"downregulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"downregulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"downregulation of ribonucleic replicase activity","type":"exact"},{"name":"downregulation of ribonucleic synthetase activity","type":"related"},{"name":"downregulation of transcriptase","type":"broad"},{"name":"inhibition of PB1 proteins","type":"related"},{"name":"inhibition of PB2 proteins","type":"related"},{"name":"inhibition of RDRP","type":"related"},{"name":"inhibition of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"inhibition of RNA replicase activity","type":"exact"},{"name":"inhibition of RNA synthetase activity","type":"related"},{"name":"inhibition of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"inhibition of RNA-dependent RNA replicase activity","type":"exact"},{"name":"inhibition of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"inhibition of RNA-directed RNA polymerase activity","type":"narrow"},{"name":"inhibition of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"inhibition of phage f2 replicase","type":"narrow"},{"name":"inhibition of polymerase L","type":"related"},{"name":"inhibition of ribonucleic acid replicase activity","type":"exact"},{"name":"inhibition of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"inhibition of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"inhibition of ribonucleic replicase activity","type":"exact"},{"name":"inhibition of ribonucleic synthetase activity","type":"related"},{"name":"inhibition of transcriptase","type":"broad"},{"name":"negative regulation of 3D polymerase activity","type":"exact"},{"name":"negative regulation of PB1 proteins","type":"related"},{"name":"negative regulation of PB2 proteins","type":"related"},{"name":"negative regulation of RDRP","type":"related"},{"name":"negative regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"negative regulation of RNA replicase activity","type":"exact"},{"name":"negative regulation of RNA synthetase activity","type":"related"},{"name":"negative regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"negative regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"negative regulation of RNA-directed RNA polymerase activity","type":"broad"},{"name":"negative regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"negative regulation of phage f2 replicase","type":"narrow"},{"name":"negative regulation of polymerase L","type":"related"},{"name":"negative regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"negative regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"negative regulation of ribonucleic replicase activity","type":"exact"},{"name":"negative regulation of ribonucleic synthetase activity","type":"related"},{"name":"negative regulation of transcriptase","type":"broad"}],"termid":"GO:1900260"}


id: MOD:00089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-palmitoyl-L-serine.","definition_xrefs":["PubMed:3467339","OMSSA:94","RESID:AA0080","Unimod:47#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoylated residue","termid":"MOD:00652"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(hexadecanoyloxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-palmitoyl serine intermediate","type":"exact"},{"name":"L-serine hexadecanoate ester","type":"exact"},{"name":"LIPID O-palmitoyl serine","type":"exact"},{"name":"O-hexadecanoylated L-serine","type":"exact"},{"name":"O-palmitoyl-L-serine","type":"exact"},{"name":"O-palmitoylated L-serine","type":"exact"},{"name":"O3-palmitoyl-serine","type":"exact"},{"name":"OPamSer","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"palmitoylations","type":"exact"},{"name":"serine palmitate ester","type":"exact"}],"termid":"MOD:00089"}


id: GO:0031324
data:
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id: PBO:0038734
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7A","termid":"PBO:0038734"}


id: GO:0001820
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a cell. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells.","definition_xrefs":["GOC:ef","ISBN:0198506732","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin transport","termid":"GO:0006837"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"serotonin secretion","synonyms":[{"name":"5-HT secretion","type":"exact"},{"name":"5-hydroxytryptamine secretion","type":"exact"},{"name":"serotonin release","type":"related"}],"termid":"GO:0001820"}


id: PBO:0061894
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, medium wave sensitive 2","termid":"PBO:0061894"}


id: GO:0004864
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id: PBO:0090665
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear export signal receptor Kap109","termid":"PBO:0090665"}


id: FYPO:0006941
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to actin cortical patches for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to actin cortical patch","synonyms":[{"name":"increased duration of protein localisation to actin cortical patch","type":"exact"},{"name":"increased duration of protein localization to F-actin patch","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of protein localization to actin patch","type":"exact"}],"termid":"FYPO:0006941"}


id: GO:0106236
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation/production of a glycolipid surfactant that acts as a bacterial biofilm dispersal.","definition_xrefs":["PMID:28715477","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"rhamnolipid biosynthesis","synonyms":[{"name":"rhamnolipid production","type":"related"}],"termid":"GO:0106236"}


id: PBO:0056690
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 11","termid":"PBO:0056690"}


id: GO:0030199
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collagen fibril organization","synonyms":[{"name":"collagen fibril organisation","type":"exact"},{"name":"fibrillar collagen organization","type":"exact"}],"termid":"GO:0030199"}


id: GO:0061921
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propionylation of peptidyl-lysine.","definition_xrefs":["PMID:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine propionylation","termid":"GO:0061921"}


id: PBO:0052624
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 3","termid":"PBO:0052624"}


id: PR:O14226
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exo84 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo84 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.08c","synonyms":[{"name":"Spom972h-exo84","type":"exact"}],"termid":"PR:O14226"}


id: PBO:0081161
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein 2","termid":"PBO:0081161"}


id: PBO:0060871
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member C/D","termid":"PBO:0060871"}


id: PBO:0075797
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18 subunit of BAF chromatin remodeling complex","termid":"PBO:0075797"}


id: GO:0046104
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving thymidine, deoxyribosylthymine thymine 2-deoxyriboside, a deoxynucleoside very widely distributed but occurring almost entirely as phosphoric esters in deoxynucleotides and deoxyribonucleic acid, DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"thymidine metabolic process","synonyms":[{"name":"deoxyribosylthymine metabolic process","type":"exact"},{"name":"deoxyribosylthymine metabolism","type":"exact"},{"name":"thymidine metabolism","type":"exact"}],"termid":"GO:0046104"}


id: GO:1903879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11beta-hydroxyprogesterone.","definition_xrefs":["PMID:10802282","GO_REF:0000067","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"11beta-hydroxyprogesterone binding","termid":"GO:1903879"}


id: PR:O94354
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An argininosuccinate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02459","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.05c","secondary_identifiers":["UniProtKB:O94354"],"synonyms":[{"name":"Spom972h-ASS1","type":"exact"},{"name":"citrulline--aspartate ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94354"}


id: PBO:0030226
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tacrolimus_during_osmotic_stress","termid":"PBO:0030226"}


id: GO:0010134
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  {"annotated_genes":["SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76621],"is_not":false,"summary":null,"term":"GO:0010134"}]},"cv_name":"biological_process","definition":"The pathway by which inorganic sulfate is activated, reduced and incorporated into sulfated compounds, where the activated sulfate, adenylyl-sulfate, is reduced to sulfite by the activity of adenylyl-sulfate reductase.","definition_xrefs":["EC:1.8.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03475":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfate assimilation via adenylyl sulfate reduction","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SULFMETII-PWY"],"synonyms":[{"name":"sulphate assimilation via adenylyl sulphate reduction","type":"exact"}],"termid":"GO:0010134","terms_by_termid":{"GO:0010134":null}}


id: PBO:0049569
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 6","termid":"PBO:0049569"}


id: GO:0003101
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which epinephrine-norepinephrine modulate the force with which blood passes through the circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by circulatory epinephrine-norepinephrine","synonyms":[{"name":"regulation of blood pressure by circulating adrenaline-noradrenaline","type":"related"}],"termid":"GO:0003101"}


id: GO:0050809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to diazepam, one of the most widely used benzodiazepine drugs. It is used as an anti-anxiety-hypnotic agent and has the proprietary name Valium.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"diazepam binding","synonyms":[{"name":"Valium binding","type":"exact"},{"name":"diazepam binding inhibitor activity","type":"related"}],"termid":"GO:0050809"}


id: GO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900921"],"synonyms":[{"name":"down regulation of L-glutamate import","type":"exact"},{"name":"down regulation of L-glutamate transport","type":"broad"},{"name":"down regulation of L-glutamate uptake","type":"related"},{"name":"down-regulation of L-glutamate import","type":"exact"},{"name":"down-regulation of L-glutamate transport","type":"broad"},{"name":"down-regulation of L-glutamate uptake","type":"related"},{"name":"downregulation of L-glutamate import","type":"exact"},{"name":"downregulation of L-glutamate transport","type":"broad"},{"name":"downregulation of L-glutamate uptake","type":"related"},{"name":"inhibition of L-glutamate import","type":"narrow"},{"name":"inhibition of L-glutamate transport","type":"narrow"},{"name":"inhibition of L-glutamate uptake","type":"narrow"},{"name":"negative regulation of L-glutamate import","type":"broad"},{"name":"negative regulation of L-glutamate transport","type":"broad"},{"name":"negative regulation of L-glutamate uptake","type":"related"},{"name":"regulation of L-glutamate import","type":"broad"}],"termid":"GO:0002037"}


id: RO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has developmental contribution from","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"},{"relation_name":"is_a","term_name":"has_potential_to_developmentally_contribute_to","termid":"RO:0002385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_contributes_to","termid":"RO:0002255"}


id: PBO:0089078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein associated with stress granule","termid":"PBO:0089078"}


id: PBO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stabilizes","termid":"PBO:0000014"}


id: PBO:0074272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 13","termid":"PBO:0074272"}


id: GO:0052220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052220)","synonyms":[{"name":"positive aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052220"}


id: PBO:0069194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 448, pseudogene","termid":"PBO:0069194"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: GO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resumption of the mitotic cell division cycle by pheromone-arrested cells that have not mated. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["PMID:9927449","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"re-entry into mitotic cell cycle","termid":"GO:0000320"},{"relation_name":"is_a","term_name":"adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion","termid":"GO:0000754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"re-entry into mitotic cell cycle after pheromone arrest","termid":"GO:0000321"}


id: GO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["CL:0000763","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell homeostasis","termid":"GO:0002262"}


id: PBO:0027709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0027709"}


id: PBO:0052650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 18","termid":"PBO:0052650"}


id: PBO:0109612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA lyase like 1","termid":"PBO:0109612"}


id: GO:0006434
data:
  {"annotated_genes":["SJAG_02977","SJAG_04762"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75783],"is_not":false,"summary":null,"term":"GO:0006434"},{"annotations":[72538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"}]},"cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. The seryl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a serine-accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02977":null,"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"seryl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0006434","terms_by_termid":{"GO:0006434":null,"GO:0070158":null}}


id: PR:Q9US15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC607.02c gene.","definition_xrefs":["UniProtKB:Q9US15","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0653 protein C607.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.02c","synonyms":[{"name":"Spom972h-SPAC607.02c","type":"exact"}],"termid":"PR:Q9US15"}


id: GO:0071295
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071295","terms_by_termid":{"GO:0036245":null}}


id: PR:Q9US56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pom34 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 31 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.02","synonyms":[{"name":"Spom972h-pom34","type":"exact"}],"termid":"PR:Q9US56"}


id: PBO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 34","termid":"PBO:0071568"}


id: PBO:0059099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 5","termid":"PBO:0059099"}


id: GO:0097191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:yaf","PMID:17340152","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway","synonyms":[{"name":"death receptor-mediated apoptosis","type":"narrow"},{"name":"extrinsic apoptosis","type":"narrow"},{"name":"extrinsic apoptotic pathway","type":"exact"},{"name":"extrinsic apoptotic signaling pathway in presence of ligand","type":"narrow"},{"name":"extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:0097191"}


id: PBO:0062126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 6","termid":"PBO:0062126"}


id: GO:0009452
data:
  {"annotated_genes":["SJAG_01713","SJAG_01724","SJAG_04034","SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77939,111762,102887,74467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[59928],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript.","definition_xrefs":["GOC:vw","PMID:9266685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"7-methylguanosine RNA capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA capping","type":"broad"},{"name":"m(7)G RNA capping","type":"exact"}],"termid":"GO:0009452","terms_by_termid":{"GO:0006370":null,"GO:0106005":null}}


id: PBO:0059128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 6","termid":"PBO:0059128"}


id: GO:0047086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + progesterone = H2O + NADP+ + testosterone acetate.","definition_xrefs":["EC:1.14.13.54","MetaCyc:1.14.13.54-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ketosteroid monooxygenase activity","synonyms":[{"name":"17alpha-hydroxyprogesterone, NADPH2:oxygen oxidoreductase (20-hydroxylating, side-chain cleaving)","type":"related"},{"name":"androstenedione, NADPH2:oxygen oxidoreductase (17-hydroxylating, lactonizing)","type":"related"},{"name":"ketosteroid,NADPH:oxygen oxidoreductase (20-hydroxylating, ester-producing/20-hydroxylating, side-chain cleaving/17-hydroxylating, lactonizing)","type":"related"},{"name":"progesterone, NADPH2:oxygen oxidoreductase (20-hydroxylating, ester-producing)","type":"related"},{"name":"steroid-ketone monooxygenase activity","type":"related"}],"termid":"GO:0047086"}


id: PBO:0015249
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with non-coding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015249"}


id: PBO:0068914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 157, pseudogene","termid":"PBO:0068914"}


id: PBO:0045525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTWD1 pseudogene 1","termid":"PBO:0045525"}


id: PBO:0012547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 (predicted)","termid":"PBO:0012547"}


id: PBO:0055713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and cysteine rich domains 1","termid":"PBO:0055713"}


id: GO:0006422
data:
  {"annotated_genes":["SJAG_01197","SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75590],"is_not":false,"summary":null,"term":"GO:0006422"},{"annotations":[113020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"}]},"cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. The aspartyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an aspartic acid accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01197":null,"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"aspartyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006422","terms_by_termid":{"GO:0006422":null,"GO:0070146":null}}


id: GO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules.","definition_xrefs":["PMID:14570576","GOC:cilia","PMID:23945166","GOC:kmv","PMID:22118932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"intraciliary transport particle","synonyms":[{"name":"IFT complex","type":"related"},{"name":"intraflagellar transport complex","type":"exact"},{"name":"intraflagellar transport particle","type":"exact"}],"termid":"GO:0030990"}


id: GO:0016114
data:
  {"annotated_genes":["SJAG_03360","SJAG_03715","SJAG_04307","SJAG_04499","SJAG_04568","SJAG_01474","SJAG_00624","SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97147,70665,77224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045337"},{"annotations":[109957,78312,108827,73680],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0010142"},{"annotations":[104634,94890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033384"},{"annotations":[94891,104635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[84275,66461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"},{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_00624":null,"SJAG_01474":null,"SJAG_03352":null,"SJAG_03360":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpenoid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Terpenoid"],"synonyms":[{"name":"terpenoid anabolism","type":"exact"},{"name":"terpenoid biosynthesis","type":"exact"},{"name":"terpenoid formation","type":"exact"},{"name":"terpenoid synthesis","type":"exact"}],"termid":"GO:0016114","terms_by_termid":{"GO:0010142":null,"GO:0016104":null,"GO:0033384":null,"GO:0033386":null,"GO:0045337":null}}


id: PBO:0082501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase delta; responsible for most of lagging strand DNA synthesis; required for chromosomal DNA replication during mitosis and meiosis, intragenic recombination, repair of double strand DNA breaks, and DNA replication during nucleotide excision repair (NER)","termid":"PBO:0082501"}


id: GO:0018442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an ester group to a glutamic acid residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamic acid esterification (obsolete GO:0018442)","termid":"GO:0018442"}


id: PBO:0110360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 4","termid":"PBO:0110360"}


id: PBO:0048595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric carcinoma proliferation enhancing transcript 1","termid":"PBO:0048595"}


id: PBO:0065030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDX5 pseudogene 1","termid":"PBO:0065030"}


id: PBO:0045762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase domain containing 2","termid":"PBO:0045762"}


id: PBO:0085299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein, predicted to have 1 transmembrane segment; induced during cell integrity signaling; PRM5 has a paralog, YNL058C, that arose from the whole genome duplication","termid":"PBO:0085299"}


id: FYPO:0006786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing manganese ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on manganese","synonyms":[{"name":"normal cell population growth in presence of manganese","type":"exact"},{"name":"normal cell population growth on manganese","type":"exact"},{"name":"normal cell population growth on manganese ion","type":"exact"},{"name":"normal cellular response to manganese","type":"related"},{"name":"normal growth on manganese ions","type":"exact"},{"name":"normal vegetative cell population growth on manganese","type":"exact"}],"termid":"FYPO:0006786"}


id: GO:0034642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microfilament, mediated by motor proteins.","definition_xrefs":["PMID:16306220","GOC:mah","PMID:15979253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitochondrion migration along actin filament","synonyms":[{"name":"mitochondrial migration along actin filament","type":"exact"},{"name":"mitochondrial migration along microfilament","type":"exact"},{"name":"mitochondrial migration, actin-mediated","type":"exact"},{"name":"mitochondrion migration along microfilament","type":"exact"},{"name":"mitochondrion transport along actin filament","type":"exact"}],"termid":"GO:0034642"}


id: GO:0043150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA that contributes to the process of double-strand break repair via homologous recombination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281","GO:0006310"],"is_obsolete":false,"name":"DNA synthesis involved in double-strand break repair via homologous recombination","synonyms":[{"name":"DNA synthesis during double-strand break repair via homologous recombination","type":"related"}],"termid":"GO:0043150"}


id: GO:0003880
data:
  {"annotated_genes":["SJAG_02660","SJAG_01261","SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75139,101134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[74557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the oxygen atom of a carboxyl group at the C-terminal of a protein.","definition_xrefs":["PMID:8428937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_02660":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0140096","GO:0008276","GO:0003824"],"is_obsolete":false,"name":"protein C-terminal carboxyl O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal protein carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0003880","terms_by_termid":{"GO:0004671":null,"GO:0018423":null}}


id: PBO:0074700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70J","termid":"PBO:0074700"}


id: GO:0035157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a fusion cell fate. Once the terminal and fusion fates have been correctly induced, inhibitory feedback loops prevent the remaining branch cells from assuming similar fates.","definition_xrefs":["PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"fusion cell fate specification","termid":"GO:0035156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fusion cell fate specification","synonyms":[{"name":"down regulation of fusion cell fate specification","type":"exact"},{"name":"down-regulation of fusion cell fate specification","type":"exact"},{"name":"downregulation of fusion cell fate specification","type":"exact"},{"name":"inhibition of fusion cell fate specification","type":"narrow"}],"termid":"GO:0035157"}


id: GO:0072393
data:
  {"annotated_genes":["SJAG_01546","SJAG_03835","SJAG_03062","SJAG_01613","SJAG_03116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[98303,73441,92131,94543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a microtubule organizing center.","definition_xrefs":["GOC:BHF","PMID:19825938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring","termid":"GO:0034453"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"microtubule anchoring at microtubule organizing center","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule anchoring at MTOC","type":"exact"},{"name":"microtubule anchoring at microtubule organising centre","type":"exact"}],"termid":"GO:0072393","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0048718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 1","termid":"PBO:0048718"}


id: GO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde biosynthetic process","synonyms":[{"name":"formaldehyde anabolism","type":"exact"},{"name":"formaldehyde biosynthesis","type":"exact"},{"name":"formaldehyde formation","type":"exact"},{"name":"formaldehyde synthesis","type":"exact"},{"name":"methanal biosynthesis","type":"exact"},{"name":"methanal biosynthetic process","type":"exact"}],"termid":"GO:0046293"}


id: GO:2000790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"}


id: PBO:0065058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and arginine rich end leucine rich repeat protein","termid":"PBO:0065058"}


id: PBO:0060478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOGNB pseudogene 3","termid":"PBO:0060478"}


id: _global:immediately_causally_downstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of","termid":"_global:causally_downstream_of"},{"relation_name":"is_a","term_name":"immediately_preceded_by","termid":"_global:immediately_preceded_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_downstream_of","secondary_identifiers":["RO:0002405"],"termid":"_global:immediately_causally_downstream_of"}


id: PBO:0080464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1","termid":"PBO:0080464"}


id: GO:0018031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.","definition_xrefs":["GOC:mah","PMID:29074776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}


id: PBO:0091169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase peripheral stalk assembly factor Ina17","termid":"PBO:0091169"}


id: PBO:0004959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family C26 protein","termid":"PBO:0004959"}


id: GO:0042577
data:
  {"annotated_genes":["SJAG_04986","SJAG_00920","SJAG_02356","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71066,75178,75845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008195"},{"annotations":[78286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042392"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phospholipid + H2O = a lipid + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00920":null,"SJAG_02356":null,"SJAG_02763":null,"SJAG_04986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"lipid phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042577","terms_by_termid":{"GO:0008195":null,"GO:0042392":null}}


id: PBO:0028214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arsenate_reductase_activity","termid":"PBO:0028214"}


id: PBO:0028232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_salt_stress","termid":"PBO:0028232"}


id: PBO:0066442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator family member 3","termid":"PBO:0066442"}


id: GO:0016782
data:
  {"annotated_genes":["SJAG_01239","SJAG_01935","SJAG_00186","SJAG_04113","SJAG_03553","SJAG_00358","SJAG_01302","SJAG_03701","SJAG_03896","SJAG_02985","SJAG_02769","SJAG_03932"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016784"},{"annotations":[86897,64977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008775"},{"annotations":[77980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004076"},{"annotations":[77293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031071"},{"annotations":[112836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036455"},{"annotations":[74240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016992"},{"annotations":[86899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008260"},{"annotations":[69794,111965,73672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004792"},{"annotations":[89667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061708"},{"annotations":[101064,103588,89668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106054"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a sulfur-containing group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_01239":null,"SJAG_01302":null,"SJAG_01935":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_03553":null,"SJAG_03701":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"transferase activity, transferring sulphur-containing groups","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.8.-.-"],"termid":"GO:0016782","terms_by_termid":{"GO:0004076":null,"GO:0004792":null,"GO:0008260":null,"GO:0008775":null,"GO:0016784":null,"GO:0016992":null,"GO:0031071":null,"GO:0036455":null,"GO:0061708":null,"GO:0106054":null}}


id: PBO:0003318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi matrix protein (predicted)","termid":"PBO:0003318"}


id: GO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H+.","definition_xrefs":["EC:2.7.3.2","RHEA:17157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"creatine kinase activity","secondary_identifiers":["Reactome:R-HSA-200326","KEGG_REACTION:R01881","MetaCyc:CREATINE-KINASE-RXN","Reactome:R-HSA-200318"],"synonyms":[{"name":"ATP:creatine N-phosphotransferase activity","type":"related"},{"name":"ATP:creatine phosphotransferase activity","type":"related"},{"name":"BB-CK","type":"related"},{"name":"CK","type":"related"},{"name":"CK-BB","type":"related"},{"name":"CK-MB","type":"related"},{"name":"CK-MM","type":"related"},{"name":"CKMiMi","type":"related"},{"name":"MB-CK","type":"related"},{"name":"MM-CK","type":"related"},{"name":"Mi-CK","type":"related"},{"name":"MiMi-CK","type":"related"},{"name":"adenosine triphosphate-creatine transphosphorylase activity","type":"related"},{"name":"creatine phosphokinase activity","type":"related"},{"name":"creatine phosphotransferase activity","type":"related"},{"name":"phosphocreatine kinase activity","type":"related"}],"termid":"GO:0004111"}


id: PBO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 3 (predicted)","termid":"PBO:0000350"}


id: GO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005730","GO:0005575"],"is_obsolete":false,"name":"fibrillar center","synonyms":[{"name":"fibrillar centre","type":"exact"}],"termid":"GO:0001650"}


id: GO:1902888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an astral microtubule.","definition_xrefs":["PMID:16054030","GOC:TermGenie","GO_REF:0000087","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"},{"relation_name":"is_a","term_name":"protein localization to cytoplasmic microtubule","termid":"GO:1905755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to astral microtubule","synonyms":[{"name":"protein localisation in astral microtubule","type":"exact"},{"name":"protein localisation to astral microtubule","type":"exact"},{"name":"protein localization in astral microtubule","type":"exact"}],"termid":"GO:1902888"}


id: FYPO:0002297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized throughout the cell cortex (rather than concentrated at the cell ends as in wild type cells) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:8834798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dispersed actin cortical patch localization during vegetative growth","termid":"FYPO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0004803"],"is_obsolete":false,"name":"dispersed actin cortical patch localization during mitotic interphase","synonyms":[{"name":"delocalised actin cortical patches during mitotic interphase","type":"exact"},{"name":"delocalized actin cortical patches during mitotic interphase","type":"exact"},{"name":"dispersed F-actin patch localization during mitotic interphase","type":"exact"},{"name":"dispersed actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"dispersed actin cortical patch localization during interphase of mitotic cell cycle","type":"related"},{"name":"dispersed actin cortical patch localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"dispersed actin cortical patch location during mitotic interphase","type":"related"},{"name":"dispersed actin patch localization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002297"}


id: GO:0086026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an atrial cardiomyocyte to an AV node cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell signaling","synonyms":[{"name":"atrial cardiomyocyte to AV node cell signaling","type":"exact"},{"name":"atrial cardiomyocyte to AV node cell signalling","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell signaling","type":"exact"}],"termid":"GO:0086026"}


id: GO:0061065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dauer larval development","termid":"GO:0061065"}


id: PBO:0080927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 5","termid":"PBO:0080927"}


id: MOD:01103
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00503. Remap to MOD:00503.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01103 myristoleylation (one double bond) (obsolete MOD:01103)","termid":"MOD:01103"}


id: PBO:0073201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3B","termid":"PBO:0073201"}


id: PBO:0069524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 793, pseudogene","termid":"PBO:0069524"}


id: PBO:0025499
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria","termid":"PBO:0025499"}


id: FYPO:0006791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of lipid droplets.","definition_xrefs":["PMID:30355493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"lipid droplets present in normal numbers","synonyms":[{"name":"lipid droplets present in normal numbers during mitotic cell cycle","type":"exact"},{"name":"lipid droplets present in normal numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0006791"}


id: PBO:0028259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3K9me_binding","termid":"PBO:0028259"}


id: GO:0016878
data:
  {"annotated_genes":["SJAG_00947","SJAG_03909","SJAG_03471","SJAG_03813","SJAG_02741","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003987"},{"annotations":[75619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[108503,100807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[100808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[110786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050203"},{"annotations":[100809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"},{"annotations":[71381,74620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of an acid and a thiol via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.2.1.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_01524":null,"SJAG_02741":null,"SJAG_03471":null,"SJAG_03813":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"acid-thiol ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016878","terms_by_termid":{"GO:0003987":null,"GO:0004775":null,"GO:0031956":null,"GO:0050203":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: PBO:0063829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine phosphatase 1","termid":"PBO:0063829"}


id: GO:0046158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ocellus pigments, any general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["PMID:18421706","PMID:15176085","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigmentation","termid":"GO:0043474"},{"relation_name":"part_of","term_name":"ocellus pigmentation","termid":"GO:0033060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ocellus pigment metabolic process","synonyms":[{"name":"ocellus pigment metabolism","type":"exact"}],"termid":"GO:0046158"}


id: GO:0102522
data:
  {"annotated_genes":["SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93412],"is_not":false,"summary":null,"term":"GO:0102522"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 4-demethylwyosine37 in tRNAPhe = 5'-S-methyl-5'-thioadenosine + H+ + 7-[(3S)-3-amino-3-carboxypropyl]-4-demethylwyosine37 in tRNAPhe.","definition_xrefs":["GOC:pz","EC:2.5.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0003674","GO:0016765","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:36355","MetaCyc:RXN-14518"],"termid":"GO:0102522","terms_by_termid":{"GO:0102522":null}}


id: PBO:0081569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 496","termid":"PBO:0081569"}


id: PBO:0084636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase that methylates residue G1575 of 18S rRNA; required for rRNA processing and nuclear export of 40S ribosomal subunits independently of methylation activity; functions with DEAH-box RNA helicase Ecm16p; diploid mutant displays random budding pattern; functional homolog of human WBSCR22","termid":"PBO:0084636"}


id: FYPO:0007665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, and contains one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"viable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable with septation in the absence of nuclear division","type":"related"},{"name":"viable with septation independent of mitosis","type":"related"},{"name":"viable with septation without nuclear division","type":"related"}],"termid":"FYPO:0007665"}


id: PBO:0031571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_small_vegetative_cell","termid":"PBO:0031571"}


id: GO:0030600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-polysaccharide + H2O = ferulate + polysaccharide.","definition_xrefs":["EC:3.1.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"feruloyl esterase activity","secondary_identifiers":["MetaCyc:3.1.1.73-RXN"],"synonyms":[{"name":"4-hydroxy-3-methoxycinnamoyl-sugar hydrolase activity","type":"related"},{"name":"FAE-I","type":"related"},{"name":"FAE-II","type":"related"},{"name":"FAE-III","type":"related"},{"name":"FAEA","type":"related"},{"name":"cinnAE","type":"related"},{"name":"cinnamoyl ester hydrolase activity","type":"exact"},{"name":"ferulic acid esterase activity","type":"related"},{"name":"hemicellulase accessory","type":"related"},{"name":"hydroxycinnamoyl esterase activity","type":"related"}],"termid":"GO:0030600"}


id: PBO:0059772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 46","termid":"PBO:0059772"}


id: PBO:0080066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 3","termid":"PBO:0080066"}


id: PR:Q9UTP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11H11.03c gene.","definition_xrefs":["UniProtKB:Q9UTP4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smr domain-containing protein C11H11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.03c","synonyms":[{"name":"Spom972h-SPAC11H11.03c","type":"exact"}],"termid":"PR:Q9UTP4"}


id: GO:2000290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotome development","termid":"GO:2000290"}


id: PBO:0069262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 518, pseudogene","termid":"PBO:0069262"}


id: GO:0018616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3,5-trihydroxytoluene + O2 = 2,4,6-trioxoheptanoate.","definition_xrefs":["PMID:1254564","UM-BBD_reactionID:r0093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trihydroxytoluene dioxygenase activity","secondary_identifiers":["MetaCyc:R305-RXN"],"termid":"GO:0018616"}


id: GO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole metabolic process","synonyms":[{"name":"indole metabolism","type":"exact"}],"termid":"GO:0042431"}


id: FYPO:0004977
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a new cell tip is increased.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to cell tip during vegetative growth","termid":"FYPO:0002852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to new cell tip","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to new cell tip","type":"exact"},{"name":"increased protein localization to new cell end","type":"exact"},{"name":"increased protein localization to new cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to new cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0004977","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: PBO:0039000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin filament associated protein 1 like 1","termid":"PBO:0039000"}


id: GO:1905395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a flavonoid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22700048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flavonoid","termid":"GO:1905395"}


id: FYPO:0005041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","GO:0071619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0005041"}


id: PR:O14269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iss10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.14c","synonyms":[{"name":"Spom972h-iss10","type":"exact"}],"termid":"PR:O14269"}


id: PBO:0025491
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cockayne syndrome","termid":"PBO:0025491"}


id: PBO:0090541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase/chaperone Afg1","termid":"PBO:0090541"}


id: PBO:0065112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C gamma","termid":"PBO:0065112"}


id: GO:0090653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubulo-vesicular structure located in the apical cytoplasm that participates in apical cargo recycling in polarized epithelial cells.","definition_xrefs":["PMID:16394106","PMID:21170358","PMID:12669082","PMID:9405315","PMID:17494872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"},{"relation_name":"part_of","term_name":"apical cytoplasm","termid":"GO:0090651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"apical recycling endosome","termid":"GO:0090653"}


id: SO:1000062
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide change in the codon triplet creates a terminator codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000062 sequence_variant_causing_nonsense_codon_change_in_transcript (obsolete SO:1000062)","synonyms":[{"name":"mutation causing nonsense codon change in transcript","type":"related"},{"name":"sequence variant causing nonsense codon change in transcript","type":"exact"}],"termid":"SO:1000062"}


id: GO:0018677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pentachlorophenol + NADPH + H+ + O2 = tetrachlorohydroquinone + NADP+ + chloride.","definition_xrefs":["EC:1.14.13.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pentachlorophenol monooxygenase activity","secondary_identifiers":["RHEA:18685","UM-BBD_enzymeID:e0148","MetaCyc:PCP4MONO-RXN"],"synonyms":[{"name":"PCB 4-monooxygenase activity","type":"related"},{"name":"PCB4MO activity","type":"related"},{"name":"PCP hydroxylase activity","type":"related"},{"name":"PcpB","type":"related"},{"name":"pentachlorophenol 4-monooxygenase activity","type":"exact"},{"name":"pentachlorophenol dechlorinase activity","type":"related"},{"name":"pentachlorophenol dehalogenase activity","type":"related"},{"name":"pentachlorophenol hydroxylase activity","type":"exact"},{"name":"pentachlorophenol,NADPH:oxygen oxidoreductase (hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018677"}


id: PR:O94683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA-processing protein 7 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03610","PANTHER:PTHR13191:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.17","secondary_identifiers":["UniProtKB:O94683"],"synonyms":[{"name":"Spom972h-RRP7A","type":"exact"}],"termid":"PR:O94683"}


id: PBO:0087309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small heat shock protein (sHSP) with chaperone activity; forms hollow, sphere-shaped oligomers that suppress unfolded proteins aggregation; long-lived protein that is preferentially retained in mother cells and forms cytoplasmic foci; oligomer activation requires heat-induced conformational change; also has mRNA binding activity","termid":"PBO:0087309"}


id: GO:0071620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group onto a serine residue at position 5 within the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II. Typically, phosphorylation of serine 5 (Ser5) occurs near the 5' ends of genes. It is generally still observed in the middle of genes, overlapping with phosphorylation of serine 2, but is generally not present at the 3' ends of genes. In vivo, Ser5 phosphorylation occurs primarily through the action of TFIIH (KIN28 in S. cerevisiae, CKD7 in metazoans).","definition_xrefs":["PMID:17079683","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues (obsolete GO:0071620)","termid":"GO:0071620"}


id: PBO:0067557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 709, pseudogene","termid":"PBO:0067557"}


id: FYPO:0000157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to DNA damage is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal response to DNA damage stimulus during vegetative growth","synonyms":[{"name":"abnormal response to DNA damage during vegetative growth","type":"exact"},{"name":"abnormal response to DNA damage stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000157"}


id: PBO:0072610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 5","termid":"PBO:0072610"}


id: PBO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.75","termid":"PBO:0001832"}


id: GO:1900142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte apoptotic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell apoptotic process","termid":"GO:0034351"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte apoptotic process","termid":"GO:1900141"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte apoptotic process","termid":"GO:0097252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte apoptotic process","synonyms":[{"name":"down regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"down regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"down-regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"down-regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"downregulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"downregulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"inhibition of oligodendrocyte apoptosis","type":"narrow"},{"name":"inhibition of oligodendrocyte apoptotic process","type":"narrow"},{"name":"negative regulation of oligodendrocyte apoptosis","type":"narrow"}],"termid":"GO:1900142"}


id: GO:2000712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000712)","synonyms":[{"name":"regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000712"}


id: GO:0030015
data:
  {"annotated_genes":["SJAG_00285","SJAG_03883","SJAG_00343","SJAG_01053","SJAG_01944","SJAG_03597","SJAG_02540","SJAG_04407","SJAG_04350"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70087,73492,73800,85290,87434,87927,89732,111618,112153],"is_not":false,"summary":null,"term":"GO:0030015"}]},"cv_name":"cellular_component","definition":"The core of the CCR4-NOT complex. In Saccharomyces the CCR4-NOT core complex comprises Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p.","definition_xrefs":["GOC:sart","PMID:11113136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"CCR4-NOT complex","termid":"GO:0030014"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_01053":null,"SJAG_01944":null,"SJAG_02540":null,"SJAG_03597":null,"SJAG_03883":null,"SJAG_04350":null,"SJAG_04407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CCR4-NOT core complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030015","terms_by_termid":{"GO:0030015":null}}


id: internal:obsolete_name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsolete_name","termid":"internal:obsolete_name"}


id: GO:1903972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:TermGenie","PMID:19100238","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of response to macrophage colony-stimulating factor","termid":"GO:1903969"},{"relation_name":"regulates","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"regulation of cellular response to macrophage colony-stimulating factor","type":"exact"}],"termid":"GO:1903972"}


id: FYPO:0005670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype with abnormal chromosome segregation that is observed when a cell is exposed to methyl methanesulfonate. In this type of cut phenotype, a cell undergoes septation despite abnormal chromosome segregation such that the nucleus forms a single mass through which the septum forms.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abnormal chromosome segregation during cellular response to methyl methanesulfonate (obsolete FYPO:0005670)","synonyms":[{"name":"cut with abnormal chromosome segregation during cellular response to MMS","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"cut with abnormal chromosome segregation in response to methyl methanesulfonate","type":"exact"},{"name":"cut with abnormal mitotic chromosome segregation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005670"}


id: FYPO:0003711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain any detectable Skb1-containing lateral cortical nodes.","definition_xrefs":["PMID:25009287","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"lateral cortical nodes absent from cell","synonyms":[{"name":"Skb1-containing cortical nodes absent from cell","type":"exact"},{"name":"absent lateral cortical nodes","type":"exact"},{"name":"lateral cortical nodes absent from cell during mitotic cell cycle","type":"related"},{"name":"lateral cortical nodes absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003711"}


id: PBO:0088437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, no evidence for translation on annotated strand","termid":"PBO:0088437"}


id: PBO:0073963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 12","termid":"PBO:0073963"}


id: GO:0010465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with nerve growth factor (NGF), to prevent apoptosis in neurons and promote nerve growth, or to initiate a change in cell activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor activity","termid":"GO:0005030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"nerve growth factor receptor activity","synonyms":[{"name":"NGF receptor activity","type":"exact"},{"name":"beta-nerve growth factor receptor activity","type":"exact"}],"termid":"GO:0010465"}


id: GO:0005311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (dicarboxylate or tricarboxylate)(out) + Na+(out) = (dicarboxylate or tricarboxylate)(in) + Na+(in).","definition_xrefs":["TC:2.A.47.1.5"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:dicarboxylate/tricarboxylate symporter activity (obsolete GO:0005311)","synonyms":[{"name":"sodium:dicarboxylate/tricarboxylate cotransporter activity","type":"broad"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"exact"}],"termid":"GO:0005311"}


id: PBO:0014583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-containing RNAs endoribonuclease (predicted)","termid":"PBO:0014583"}


id: PBO:0030469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_iron-sulfur_cluster_transfer","termid":"PBO:0030469"}


id: GO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a disaccharide. Disaccharides are sugars composed of two monosaccharide units.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"disaccharide binding","termid":"GO:0048030"}


id: PBO:0068556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 7, pseudogene","termid":"PBO:0068556"}


id: PBO:0050716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 2","termid":"PBO:0050716"}


id: PBO:0089374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase Pyp2","termid":"PBO:0089374"}


id: GO:0099015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The catabolic breakdown of the DNA of a host chromosome by a virus. This occurs during infection of bacteria by some phages. It frees up a large pool of nucleoside 5'-triphophates for use in viral DNA synthesis.","definition_xrefs":["PMID:3972821","VZ:3947","PMID:335083","PMID:5263754","PMID:163355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolism by virus of host DNA","termid":"GO:0039637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"degradation of host chromosome by virus","termid":"GO:0099015"}


id: GO:0102865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gamma-linolenoyl-[glycerolipid] + 2 ferrocytochrome b5 + O2 + 2 H+ = a (9Z,12Z)-octadeca-9,12-dien-6-ynoyl-[glycerolipid] + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["PMID:10848999","GOC:pz","RHEA:46536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"delta6-acyl-lipid desaturase activity","secondary_identifiers":["EC:1.14.19.38","MetaCyc:RXN-8343"],"termid":"GO:0102865"}


id: PATO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000219 healing (obsolete PATO:0000219)","termid":"PATO:0000219"}


id: GO:0034927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-1,2-oxide + H2O.","definition_xrefs":["UM-BBD_reactionID:r0943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyrene 1,2-monooxygenase activity","termid":"GO:0034927"}


id: PBO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase","termid":"PBO:0090228"}


id: GO:0016271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A permanent cessation of all vital functions of a tissue.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue death (obsolete GO:0016271)","termid":"GO:0016271"}


id: PBO:0077985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 7-1","termid":"PBO:0077985"}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:inorganic phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glycerone phosphate:inorganic phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: PBO:0081030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11B","termid":"PBO:0081030"}


id: GO:0039003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which regions of the embryo are delineated into the area in which the pronephric kidney will develop.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"kidney field specification","termid":"GO:0072004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric field specification","synonyms":[{"name":"pronephric kidney field specification","type":"exact"}],"termid":"GO:0039003"}


id: PBO:0055239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2666","termid":"PBO:0055239"}


id: PBO:0081744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF674 antisense RNA 1 (head to head)","termid":"PBO:0081744"}


id: PBO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX/EXS domain protein (predicted)","termid":"PBO:0005850"}


id: PBO:0075554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEM family member 2","termid":"PBO:0075554"}


id: FYPO:0007500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy does not occur when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:mah","GO:0016236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished macroautophagy","termid":"FYPO:0000380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished macroautophagy during sulfur starvation","synonyms":[{"name":"abolished macroautophagy during cellular response to sulfur starvation","type":"exact"},{"name":"abolished macroautophagy during sulfur depletion","type":"exact"},{"name":"abolished macroautophagy during sulfur deprivation","type":"exact"},{"name":"abolished macroautophagy during sulphur starvation","type":"exact"},{"name":"macroautophagy abolished during sulfur starvation","type":"exact"}],"termid":"FYPO:0007500"}


id: GO:0061045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"negative regulation of response to wounding","termid":"GO:1903035"},{"relation_name":"negatively_regulates","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of wound healing","termid":"GO:0061045"}


id: PBO:0058845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8074","termid":"PBO:0058845"}


id: FYPO:0003318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which galactose-specific flocculation does not occur. Galactose-specific flocculation is the non-sexual aggregation of cells, mediated via the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["PomBase:mah","GO:0036349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished galactose-specific flocculation","termid":"FYPO:0005504"},{"relation_name":"is_a","term_name":"abolished flocculation during vegetative growth","termid":"FYPO:0009112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished galactose-specific flocculation during vegetative growth","synonyms":[{"name":"abolished cell-cell adhesion involved in galactose-specific flocculation during vegetative growth","type":"exact"},{"name":"abolished galactose-specific flocculation during mitotic cell cycle","type":"related"},{"name":"galactose-specific flocculation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003318"}


id: PBO:0004066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-fructose-6-phosphate transaminase (predicted)","termid":"PBO:0004066"}


id: PBO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis","termid":"PBO:0000719"}


id: PBO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A9 pseudogene 1","termid":"PBO:0060722"}


id: PBO:0065847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11B, member RAS oncogene family","termid":"PBO:0065847"}


id: GO:0031768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ghrelin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ghrelin receptor binding","synonyms":[{"name":"ghrelin receptor ligand","type":"narrow"},{"name":"type 1 growth hormone secretagogue GH-releasing peptide receptor binding","type":"exact"}],"termid":"GO:0031768"}


id: FYPO:0000582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of spore germination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore germination","termid":"FYPO:0000305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of spore germination","synonyms":[{"name":"reduced rate of spore germination","type":"exact"},{"name":"spore germination: decreased rate","type":"related"}],"termid":"FYPO:0000582"}


id: FYPO:0000263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"},{"relation_name":"is_a","term_name":"translation regulation phenotype","termid":"FYPO:0000289"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of translation in response to stress","synonyms":[{"name":"protein synthesis after stress, defective","type":"related"}],"termid":"FYPO:0000263"}


id: PR:Q10360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn10 gene.","definition_xrefs":["UniProtKB:Q10360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.08","synonyms":[{"name":"Spom972h-rrn10","type":"exact"}],"termid":"PR:Q10360"}


id: FYPO:0002783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to nitric oxide. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"decreased transcription during cellular response to nitric oxide","synonyms":[{"name":"decreased transcription during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to nitric oxide during vegetative growth","type":"exact"},{"name":"decreased transcription during cellular response to nitric oxide stress","type":"related"},{"name":"reduced transcription during cellular response to nitric oxide","type":"exact"}],"termid":"FYPO:0002783"}


id: GO:1990349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells via gap junctions. A gap junction is a fine cytoplasmic channel, found in animal cells, that connects the cytoplasm of one cell to that of an adjacent cell, allowing ions and other molecules to pass freely between the two cells.","definition_xrefs":["GOC:hjd","Wikipedia:Gap_junction","PMID:23261543","PMID:14506308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"gap junction-mediated intercellular transport","termid":"GO:1990349"}


id: GO:0102090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-adrenaline(1+) + S-adenosyl-L-methionine = metanephrine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.6","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"adrenaline O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-10909"],"termid":"GO:0102090"}


id: PBO:0044502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich tail 1","termid":"PBO:0044502"}


id: PBO:0062894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 1","termid":"PBO:0062894"}


id: GO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagina development","termid":"GO:0060068"}


id: GO:0018951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-xylene, (1,4-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pxy"],"synonyms":[{"name":"p-xylene metabolism","type":"exact"},{"name":"para-xylene metabolic process","type":"exact"},{"name":"para-xylene metabolism","type":"exact"}],"termid":"GO:0018951"}


id: PBO:0041946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 6","termid":"PBO:0041946"}


id: PBO:0018185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uracil) methyltransferase Trm44 (predicted)","termid":"PBO:0018185"}


id: GO:0001161
data:
  {"annotated_genes":["SJAG_03519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to an intronic DNA sequence that regulates the transcription of the transcript it is contained within.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488","GO:0000976"],"is_obsolete":false,"name":"intronic transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044213"],"synonyms":[{"name":"intronic transcription regulatory region DNA binding","type":"related"}],"termid":"GO:0001161","terms_by_termid":{"GO:0001162":null}}


id: PBO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in meiosis Mei2","termid":"PBO:0002558"}


id: PBO:0068900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 142, pseudogene","termid":"PBO:0068900"}


id: PBO:0049169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein like","termid":"PBO:0049169"}


id: FYPO:0005612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nuclear envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nuclear envelope","synonyms":[{"name":"normal protein localisation to nuclear envelope","type":"exact"}],"termid":"FYPO:0005612"}


id: PBO:0069409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 669, pseudogene","termid":"PBO:0069409"}


id: PBO:0108621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 4","termid":"PBO:0108621"}


id: PBO:0030519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_carbendazim","termid":"PBO:0030519"}


id: GO:0072494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A late endosome in which regions of the limiting host cell endosomal membrane invaginate to form internal vesicles; host membrane proteins that enter the internal vesicles are sequestered from the host cytoplasm.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell late endosome","termid":"GO:0044184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host multivesicular body","synonyms":[{"name":"host cell multivesicular body","type":"exact"}],"termid":"GO:0072494"}


id: MOD:01565
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01565"}


id: PBO:0030291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glucose_carbon_source","termid":"PBO:0030291"}


id: PR:Q9P7F4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E1P3.01 gene.","definition_xrefs":["UniProtKB:Q9P7F4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C2E1P3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.01","synonyms":[{"name":"Spom972h-SPAC2E1P3.01","type":"exact"}],"termid":"PR:Q9P7F4"}


id: GO:0009236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin metabolic process","termid":"GO:0009235"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281","GO:0033013"],"is_obsolete":false,"name":"cobalamin biosynthetic process","synonyms":[{"name":"cobalamin anabolism","type":"exact"},{"name":"cobalamin biosynthesis","type":"exact"},{"name":"cobalamin formation","type":"exact"},{"name":"cobalamin synthesis","type":"exact"},{"name":"vitamin B12 biosynthesis","type":"exact"},{"name":"vitamin B12 biosynthetic process","type":"exact"}],"termid":"GO:0009236"}


id: GO:0097152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:yaf","CL:0000134","PMID:18231833","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process","synonyms":[{"name":"mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:0097152"}


id: FYPO:0005497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from RNA polymerase II promoter","termid":"FYPO:0003796"},{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished transcription from CRE promoter","synonyms":[{"name":"abolished transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished","type":"related"},{"name":"transcription from CRE promoter abolished","type":"exact"}],"termid":"FYPO:0005497"}


id: GO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"negatively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somitomeric trunk muscle development","termid":"GO:0014710"}


id: GO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanoate, 2-methylbutanoate, or 2-methylpropanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to carboxylic acid via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to carboxylic acid via Ehrlich pathway","type":"exact"}],"termid":"GO:0000953"}


id: GO:0042880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-glucuronate, the D-enantiomer of glucuronate, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0815340729","ISBN:0198506732","GOC:mtg_transport","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-glucuronate transmembrane transporter activity","termid":"GO:0042880"}


id: PBO:0049384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 6","termid":"PBO:0049384"}


id: GO:0034349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a glial cell, a non-neuronal cell of the nervous system.","definition_xrefs":["GOC:sart","CL:0000125","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell apoptotic process","synonyms":[{"name":"apoptosis of glia","type":"exact"},{"name":"apoptosis of glial cells","type":"exact"},{"name":"glia apoptosis","type":"exact"},{"name":"glia programmed cell death by apoptosis","type":"exact"},{"name":"glial cell apoptosis","type":"narrow"},{"name":"glial cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of glia by apoptosis","type":"exact"},{"name":"programmed cell death of glial cells by apoptosis","type":"exact"},{"name":"programmed cell death, glia","type":"exact"},{"name":"programmed cell death, glial cells","type":"exact"}],"termid":"GO:0034349"}


id: RO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of hyperparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"RO:0002453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasitized_by","synonyms":[{"name":"has epiparasite","type":"related"},{"name":"has hyperparasite","type":"related"},{"name":"hyperparasitoidized by","type":"related"}],"termid":"RO:0002554"}


id: GO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 melanocortin receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1 melanocortin receptor binding","synonyms":[{"name":"type 1 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0070996"}


id: PR:O13997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein IMPACT that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR16301:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein IMPACT homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.02","secondary_identifiers":["UniProtKB:O13997"],"synonyms":[{"name":"SPAC27E2.02","type":"related"},{"name":"Spom972h-IMPACT","type":"exact"}],"termid":"PR:O13997"}


id: _global:has_participant
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a relation between a process and a continuant, in which the continuant is somehow involved in the process","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_participant","secondary_identifiers":["RO:0000057"],"termid":"_global:has_participant"}


id: PBO:0070232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 170 pseudogene","termid":"PBO:0070232"}


id: PBO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 2","termid":"PBO:0060429"}


id: PBO:0068875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 115, pseudogene","termid":"PBO:0068875"}


id: PBO:0087114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated protein; proposed to act in protein synthesis, nuclear pore complex biogenesis and maintenance as well as protein folding and prion maintenance; ; has similarity to the mammalian BAG-1 protein","termid":"PBO:0087114"}


id: PR:O14109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- maf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III transcription maf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.12c","synonyms":[{"name":"Spom972h-maf1","type":"exact"}],"termid":"PR:O14109"}


id: PBO:0085828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; GFP-fusion protein localizes to the mitochondria; null mutant is viable and displays reduced frequency of mitochondrial genome loss","termid":"PBO:0085828"}


id: GO:0008694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-octaprenyl-4-hydroxy benzoate = 2-octaprenylphenol + CO2.","definition_xrefs":["MetaCyc:3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity","secondary_identifiers":["EC:4.1.1.98","RHEA:27778","GO:0019167"],"synonyms":[{"name":"3-octaprenyl-4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl 4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl-4-hydroxybenzoate carboxy-lyase activity","type":"exact"},{"name":"PPHB decarboxylase activity","type":"exact"},{"name":"UbiD","type":"related"},{"name":"UbiX","type":"related"},{"name":"polyprenyl p-hydroxybenzoate decarboxylase activity","type":"exact"}],"termid":"GO:0008694"}


id: PBO:0065457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 4","termid":"PBO:0065457"}


id: GO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm.","definition_xrefs":["PMID:12837608","PMID:15890982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"podosome","secondary_identifiers":["Wikipedia:Podosome"],"termid":"GO:0002102"}


id: GO:0044204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dense fibrillar network lying on the inner side of the host nuclear membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear matrix","termid":"GO:0044204"}


id: FYPO:0000164
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[114460,114459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal. Cell separation is the process of physically separating progeny cells after cytokinesis is complete, and involves enzymatic digestion of septum components.","definition_xrefs":["GO:0000920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null,"SJAG_03444":null},"genotype_count":3,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null,"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03444","SJAG_03143","SJAG_02252"],"single_locus_genotype_uniquenames":["sep1delta","agn1delta","ace2delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation","type":"exact"},{"name":"abnormal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0000164","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001971":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0071923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 X-linked","termid":"PBO:0071923"}


id: GO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a cardiac septum over time, from its initial formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac septum development","synonyms":[{"name":"heart septum development","type":"exact"}],"termid":"GO:0003279"}


id: FYPO:0002373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal actin cortical patch localization during mitosis","synonyms":[{"name":"abnormal F-actin patch localization during mitosis","type":"exact"},{"name":"abnormal actin cortical patch localisation during mitosis","type":"exact"},{"name":"abnormal actin cortical patch localization during mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch localization during mitosis during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch localization during mitotic M phase","type":"related"},{"name":"abnormal actin cortical patch localization during mitotic nuclear division","type":"exact"},{"name":"abnormal actin cortical patch location during mitosis","type":"related"},{"name":"abnormal actin patch localization during mitosis","type":"exact"}],"termid":"FYPO:0002373"}


id: FYPO:0003671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ATP binding","termid":"FYPO:0003671"}


id: PBO:0091191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val","termid":"PBO:0091191"}


id: PBO:0079163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 32","termid":"PBO:0079163"}


id: PBO:0082998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic protein required for sporulation","termid":"PBO:0082998"}


id: SO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self replicating circular nucleic acid molecule that is distinct from a chromosome in the organism.","definition_xrefs":["PMID:21719542","SBOL:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_plasmid","synonyms":[{"name":"circular plasmid","type":"exact"}],"termid":"SO:0002211"}


id: FYPO:0007130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homoserine O-acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homoserine O-acetyltransferase activity","termid":"FYPO:0007129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished homoserine O-acetyltransferase activity","synonyms":[{"name":"homoserine O-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007130"}


id: MOD:00200
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to D-methionine.","definition_xrefs":["RESID:AA0193","ChEBI:29984","PubMed:16033333","PubMed:2542051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-methionine","synonyms":[{"name":"(2R)-2-amino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butyric acid","type":"exact"},{"name":"D-Met","type":"exact"},{"name":"D-methionine","type":"exact"},{"name":"MOD_RES D-methionine","type":"exact"}],"termid":"MOD:00200"}


id: PBO:0087933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational activator for mRNAs with internal ribosome entry sites; associates with polysomes and binds to a specific subset of mRNAs; localizes to RNA processing bodies (P bodies) and to stress granules; may have a role in translation regulation under stress conditions; ortholog of human ZNF9/CNBP, a gene involved in myotonic dystrophy type 2","termid":"PBO:0087933"}


id: PBO:0071479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 20","termid":"PBO:0071479"}


id: PBO:0036518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex subunit, peloto ortholog Dom34 (predicted)","termid":"PBO:0036518"}


id: PBO:0070642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 13","termid":"PBO:0070642"}


id: GO:0010928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of auxin mediated signaling pathway","synonyms":[{"name":"regulation of auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0010928"}


id: PBO:0030309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus_localization","termid":"PBO:0030309"}


id: PBO:0079698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBL7 divergent transcript","termid":"PBO:0079698"}


id: PBO:0044005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein alpha s1","termid":"PBO:0044005"}


id: PBO:0024797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_interacts_with","termid":"PBO:0024797"}


id: FYPO:0001576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing a dipeptide such as Leu-Ala as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"abolished cell population growth on dipeptide nitrogen source","synonyms":[{"name":"abolished dipeptide utilization","type":"related"},{"name":"abolished vegetative cell population growth on dipeptide nitrogen source","type":"exact"},{"name":"cell population growth on dipeptide nitrogen source abolished","type":"exact"}],"termid":"FYPO:0001576"}


id: MOD:01665
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-terminal L-valine residue and a strand of DNA at the C-1 of a ribose, freeing the nucleotide base and forming N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine.","definition_xrefs":["RESID:AA0521","PubMed:20185759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine","synonyms":[{"name":"(2S)-2-[(3R,4R)-3,4-dihydroxy-5-(phosphonooxy)pentylidene]amino-3-methylbutanoic acid","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with DNA; via amino nitrogen","type":"exact"},{"name":"DNA glycosylase valine Schiff base intermediate","type":"exact"},{"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine","type":"exact"}],"termid":"MOD:01665"}


id: GO:0032637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-8 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-8 production","secondary_identifiers":["GO:0042228","GO:0072606"],"synonyms":[{"name":"IL-8 production","type":"exact"},{"name":"interleukin-8 biosynthetic process","type":"narrow"},{"name":"interleukin-8 secretion","type":"narrow"}],"termid":"GO:0032637"}


id: PBO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K12_acetylation_at_subtelomere","termid":"PBO:0032723"}


id: MOD:01787
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tyrosine residues through their 5' positions by amine nitrogen to form 5'-(L-tyros-5'-yl)amino-L-tyrosine.","definition_xrefs":["PubMed:18781570","RESID:AA0459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-(L-tyros-5'-yl)amino-L-tyrosine","synonyms":[{"name":"(2S,2'S)-3,3'-[iminobis(4-hydroxybenzene-3,1-diyl)]bis(2-aminopropanoic acid)","type":"exact"},{"name":"5'-(L-tyros-5'-yl)amino-L-tyrosine","type":"exact"},{"name":"5'-[(tyros-5'-yl)amino]tyrosine","type":"exact"},{"name":"5'-tyrosyl-5'-aminotyrosine","type":"exact"},{"name":"CROSSLNK 5'-tyrosyl-5'-aminotyrosine (Tyr-Tyr) (interchain)","type":"exact"},{"name":"bis(LTQ) linkage","type":"exact"}],"termid":"MOD:01787"}


id: PBO:0044090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A10","termid":"PBO:0044090"}


id: PBO:0017733
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Christianson Syndrome","termid":"PBO:0017733"}


id: GO:1901074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GO:kmv","GOC:TermGenie","PMID:19402756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"regulation of engulfment of apoptotic cell","synonyms":[{"name":"regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901074"}


id: GO:0010152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The final stages of microgametogenesis after the trinucleate stage has been reached resulting in viable pollen grains.","definition_xrefs":["PMID:11595796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"part_of","term_name":"pollen development","termid":"GO:0009555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen maturation","termid":"GO:0010152"}


id: GO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactarate, the anion of galactaric acid.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"},{"relation_name":"is_a","term_name":"galactarate metabolic process","termid":"GO:0019580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galactarate catabolic process","secondary_identifiers":["GO:0019582","MetaCyc:GALACTARDEG-PWY"],"synonyms":[{"name":"D-galactarate breakdown","type":"related"},{"name":"D-galactarate catabolic process","type":"related"},{"name":"D-galactarate catabolism","type":"related"},{"name":"D-galactarate degradation","type":"related"},{"name":"galactarate breakdown","type":"exact"},{"name":"galactarate catabolism","type":"exact"},{"name":"galactarate degradation","type":"exact"}],"termid":"GO:0046392"}


id: PBO:0017440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_transcription_of","termid":"PBO:0017440"}


id: PBO:0044300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A pseudogene 3","termid":"PBO:0044300"}


id: PBO:0108988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 4","termid":"PBO:0108988"}


id: GO:0015002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the four-electron reduction of dioxygen (O2) to water, coupled to generation of a proton electrochemical gradient across a membrane.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete heme-copper terminal oxidase activity (obsolete GO:0015002)","synonyms":[{"name":"haem-copper terminal oxidase activity","type":"exact"}],"termid":"GO:0015002"}


id: PBO:0015253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg1 (predicted)","termid":"PBO:0015253"}


id: GO:0030655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a beta-lactam antibiotic, any member of a class of natural or semisynthetic antibiotics whose characteristic feature is a strained, four-membered beta-lactam ring. They include the penicillins and many of the cephalosporins.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"},{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"beta-lactam antibiotic catabolic process","synonyms":[{"name":"beta-lactam antibiotic breakdown","type":"exact"},{"name":"beta-lactam antibiotic catabolism","type":"exact"},{"name":"beta-lactam antibiotic degradation","type":"exact"}],"termid":"GO:0030655"}


id: GO:0034598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the phosphate group from phosphothreonine by cleavage of the C-OP bond with the concomitant abstraction of the alpha proton, generating a double bond-containing product.","definition_xrefs":["PMID:18084305","PMID:17303758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphothreonine lyase activity","termid":"GO:0034598"}


id: PBO:0085878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; induced by ketoconazole; promoter region contains sterol regulatory element motif, which has been identified as a Upc2p-binding site; overexpression complements function of Nce102p in NCE102 deletion strain; FHN1 has a paralog, NCE102, that arose from the whole genome duplication","termid":"PBO:0085878"}


id: FYPO:0005015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which rRNA modification, the covalent alteration of one or more nucleotides within an rRNA molecule, is abnormal.","definition_xrefs":["GO:0000154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal rRNA modification","synonyms":[{"name":"abnormal rRNA modification during mitotic cell cycle","type":"related"},{"name":"abnormal rRNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0005015"}


id: PBO:0053409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 345","termid":"PBO:0053409"}


id: PBO:0036025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NEDD8-specific_protease_activity","termid":"PBO:0036025"}


id: PR:O74759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mst2 complex subunit nto1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.04c","synonyms":[{"name":"Spom972h-nto1","type":"exact"}],"termid":"PR:O74759"}


id: GO:0019005
data:
  {"annotated_genes":["SJAG_00192","SJAG_00341","SJAG_02044","SJAG_00615","SJAG_02162","SJAG_02651","SJAG_02591","SJAG_02822","SJAG_00439","SJAG_03219","SJAG_04573","SJAG_01022","SJAG_03651"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73426,78622,84111,90920,93785,98123],"is_not":false,"summary":null,"term":"GO:0019005"},{"annotations":[93112,97373,100087,86093,105447,89748,104238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_01022":null,"SJAG_02044":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03651":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SCF_complex"],"synonyms":[{"name":"CDL1 complex","type":"exact"},{"name":"CRL1 complex","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex","type":"exact"},{"name":"SCF complex","type":"exact"},{"name":"SCF complex substrate recognition subunit","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cullin-RING ligase 1","type":"exact"}],"termid":"GO:0019005","terms_by_termid":{"GO:0019005":null,"GO:0043224":null}}


id: GO:0071315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to morphine","termid":"GO:0043278"},{"relation_name":"is_a","term_name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to morphine","termid":"GO:0071315"}


id: PBO:0036028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_(1->3)-beta-D-glucan_level_in_periplasmic_space","termid":"PBO:0036028"}


id: PBO:0027170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_microtubule_minus-end","termid":"PBO:0027170"}


id: PBO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0032701"}


id: PBO:0070679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 50","termid":"PBO:0070679"}


id: PBO:0091401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex proline-rich subunit Iss10/Pir1","termid":"PBO:0091401"}


id: PBO:0042543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8 pseudogene 2","termid":"PBO:0042543"}


id: GO:0019846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts as to cause injury to the intestinal mucosa of other living organisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete enterotoxin activity (obsolete GO:0019846)","synonyms":[{"name":"enterotoxin activity","type":"exact"}],"termid":"GO:0019846"}


id: GO:0004340
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70158,75103],"is_not":false,"summary":null,"term":"GO:0004340"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose-6-phosphate.","definition_xrefs":["EC:2.7.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5621888","Reactome:R-HSA-5621918","RHEA:17825","Reactome:R-HSA-70420","MetaCyc:GLUCOKIN-RXN"],"synonyms":[{"name":"ATP:D-glucose 6-phosphotransferase activity","type":"related"},{"name":"glucokinase (phosphorylating)","type":"related"},{"name":"glucose kinase activity","type":"related"}],"termid":"GO:0004340","terms_by_termid":{"GO:0004340":null}}


id: PBO:0053666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 844","termid":"PBO:0053666"}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["PMID:23150719","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: PBO:0063529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 11","termid":"PBO:0063529"}


id: PBO:0063842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase alpha pseudogene 1","termid":"PBO:0063842"}


id: PBO:0042311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 pseudogene 5","termid":"PBO:0042311"}


id: PBO:0075462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 13","termid":"PBO:0075462"}


id: PBO:0044420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 4","termid":"PBO:0044420"}


id: GO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid by parietal cells in response to acetylcholine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"},{"relation_name":"part_of","term_name":"cellular response to acetylcholine","termid":"GO:1905145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"acetylcholine-induced gastric acid secretion","termid":"GO:0001699"}


id: GO:0008481
data:
  {"annotated_genes":["SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93008],"is_not":false,"summary":null,"term":"GO:0008481"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate.","definition_xrefs":["EC:2.7.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02429":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"sphinganine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SPHINGANINE-KINASE-RXN","RHEA:15465","GO:0001728"],"synonyms":[{"name":"ATP:sphinganine 1-phosphotransferase activity","type":"related"},{"name":"dihydrosphingosine kinase (phosphorylating)","type":"related"},{"name":"dihydrosphingosine kinase activity","type":"related"},{"name":"sphingosine kinase (phosphorylating)","type":"related"},{"name":"sphingosine kinase activity","type":"related"}],"termid":"GO:0008481","terms_by_termid":{"GO:0008481":null}}


id: PBO:0039434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANK3 divergent transcript","termid":"PBO:0039434"}


id: PBO:0058603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6735","termid":"PBO:0058603"}


id: PBO:0073408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 11","termid":"PBO:0073408"}


id: PBO:0083749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the TIM23 complex; with Tim23p, contributes to the architecture and function of the import channel; may link the import motor to the core Translocase of the Inner Mitochondrial membrane (TIM23 complex)","termid":"PBO:0083749"}


id: PBO:0080990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 21","termid":"PBO:0080990"}


id: PBO:0042830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 3","termid":"PBO:0042830"}


id: GO:0098831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region below the presynaptic membrane, characterized by electron-dense material, a specialized cytoskeletal matrix and accumulated (associated) synaptic vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"presynaptic active zone cytoplasmic component","synonyms":[{"name":"cortex of presynaptic active zone","type":"exact"},{"name":"presynaptic zone cortex","type":"exact"}],"termid":"GO:0098831"}


id: GO:0102636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine = 3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine + 2 5-oxo-L-prolinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine gamma-glutamylcyclotransferase activity (obsolete GO:0102636)","termid":"GO:0102636"}


id: PBO:0091622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate O-methyltransferase Pcm2","termid":"PBO:0091622"}


id: PBO:0066208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 1","termid":"PBO:0066208"}


id: PBO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 1","termid":"PBO:0044579"}


id: GO:0044302
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Hippocampal mossy fiber produced by dentate gyrus granule cells.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090601","PMID:17765709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hippocampal mossy fiber","termid":"GO:0097457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dentate gyrus mossy fiber","synonyms":[{"name":"dentate gyrus mossy fibre","type":"exact"},{"name":"granule cell axon","type":"broad"}],"termid":"GO:0044302"}


id: PBO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 1","termid":"PBO:0051873"}


id: MOD:00740
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a manganese atom or a cluster containing manganese for hydrogen atoms, or that coordinates a manganese ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese containing modified residue","synonyms":[{"name":"MnRes","type":"exact"}],"termid":"MOD:00740"}


id: PBO:0059706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 14","termid":"PBO:0059706"}


id: GO:0008313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with the ligand Gurken to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete gurken-activated receptor activity (obsolete GO:0008313)","synonyms":[{"name":"gurken receptor activity","type":"exact"}],"termid":"GO:0008313"}


id: FYPO:0006414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells) during interphase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:17452352","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of histone gene mRNA during vegetative growth","termid":"FYPO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone gene mRNA during mitotic interphase","synonyms":[{"name":"increased histone gene mRNA accumulation during mitotic interphase","type":"related"},{"name":"increased level of histone gene RNA during mitotic interphase","type":"exact"},{"name":"increased level of histone gene mRNA during interphase of mitotic cell cycle","type":"exact"},{"name":"increased level of histone gene transcripts during mitotic interphase","type":"exact"}],"termid":"FYPO:0006414"}


id: GO:0046778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that interferes with the processing of mRNA in the host cell.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by virus of host mRNA processing (obsolete GO:0046778)","synonyms":[{"name":"viral perturbation of host mRNA processing","type":"exact"}],"termid":"GO:0046778"}


id: FYPO:0001464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases to a greater extent than normal immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PomBase:mah","PMID:21811607"],"gene_count":0,"genotype_count":0,"name":"obsolete increased immediate intracellular calcium spike following extracellular calcium stimulus (obsolete FYPO:0001464)","synonyms":[{"name":"increased immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"increased immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001464"}


id: GO:0032632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-3 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-3 production","secondary_identifiers":["GO:0042223","GO:0072601"],"synonyms":[{"name":"IL-3 production","type":"exact"},{"name":"interleukin-3 biosynthetic process","type":"narrow"},{"name":"interleukin-3 secretion","type":"narrow"}],"termid":"GO:0032632"}


id: PBO:0011513
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.125","termid":"PBO:0011513"}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: PBO:0063819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family B member 1","termid":"PBO:0063819"}


id: GO:0160120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial complex that catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. The complex is organized around a 24-meric cubic core of the dihydrolipoyl transacylase (E2) with multiple (about 6 to 12) copies of the branched-chain alpha-ketoacid dehydrogenase (E1, consisting of alpha and beta subunits), about 6 copies of the dimeric dihydrolipoyl dehydrogenase (E3), and a small number of copies of the E1-specific kinase and phosphatase.","definition_xrefs":["PMID:3593587","PMID:9582350","PMID:10745006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"branched-chain alpha-keto acid dehydrogenase complex","termid":"GO:0160157"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial branched-chain alpha-keto acid dehydrogenase complex","synonyms":[{"name":"BCKD complex","type":"exact"}],"termid":"GO:0160120"}


id: PBO:0068942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 185, pseudogene","termid":"PBO:0068942"}


id: PATO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorsal structures.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsalized","termid":"PATO:0000620"}


id: SO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tag produced from a single sequencing read from a 5'-RACE product; typically a few hundred base pairs long.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RST","termid":"SO:0001467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_RST","synonyms":[{"name":"5' RST","type":"related"}],"termid":"SO:0001469"}


id: PR:O74332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1685.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.12c","synonyms":[{"name":"Spom972h-SPBC1685.12c","type":"exact"}],"termid":"PR:O74332"}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: PR:P87154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon catalytic subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10670:SF0","PRO:DNx","OMA:SCHPO03630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon catalytic subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.13c","secondary_identifiers":["UniProtKB:P87154"],"synonyms":[{"name":"DNA polymerase II subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE","type":"exact"}],"termid":"PR:P87154"}


id: PBO:0078216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-9","termid":"PBO:0078216"}


id: GO:0060406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of penile erection. Penile erection is the hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of penile erection","termid":"GO:0060405"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"penile erection","termid":"GO:0043084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penile erection","termid":"GO:0060406"}


id: PBO:0067976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 278","termid":"PBO:0067976"}


id: SO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glutamic acid.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_glutamic_acid","secondary_identifiers":["MOD:00906"],"synonyms":[{"name":"ModGlu","type":"exact"},{"name":"modified L glutamic acid","type":"exact"},{"name":"modified L-glutamic acid","type":"exact"}],"termid":"SO:0001391"}


id: PBO:0030779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methyl_methanesulfonate","termid":"PBO:0030779"}


id: PBO:0073082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly factor 2","termid":"PBO:0073082"}


id: PBO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit B","termid":"PBO:0002573"}


id: PBO:0110192
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NaTtoU","termid":"PBO:0110192"}


id: PBO:0085411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane riboflavin transporter; facilitates the uptake of vitamin B2; required for FAD-dependent processes; sequence similarity to mammalian monocarboxylate permeases, however mutants are not deficient in monocarboxylate transport","termid":"PBO:0085411"}


id: PBO:0060934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 3","termid":"PBO:0060934"}


id: PBO:0081500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 398","termid":"PBO:0081500"}


id: PBO:0036043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036043"}


id: PBO:0029864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0029864"}


id: PBO:0072658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 10","termid":"PBO:0072658"}


id: GO:0007211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by octopamine or tyramine binding to their receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription, and ending with the regulation of a downstream cellular process. Octopamine and tyramine are decarboxylation products of tyrosine, and are the invertebrate counterparts of the vertebrate adrenergic transmitters.","definition_xrefs":["PMID:15355245","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"octopamine or tyramine signaling pathway","synonyms":[{"name":"octopamine or tyramine signalling pathway","type":"exact"},{"name":"octopamine/tyramine signaling pathway","type":"exact"}],"termid":"GO:0007211"}


id: GO:0005251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a delayed rectifying voltage-gated channel. A delayed rectifying current-voltage relation is one where channel activation kinetics are time-dependent, and inactivation is slow.","definition_xrefs":["GOC:mah","PMID:11343411","PMID:2462513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"delayed rectifier potassium channel activity","secondary_identifiers":["Reactome:R-HSA-5577050","Reactome:R-HSA-5577237"],"termid":"GO:0005251"}


id: GO:0097667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Rcy1 in S. cerevisiae (Pof6 in S. pombe).","definition_xrefs":["GOC:jd","PMID:15147268","GOC:vw","PMID:14747994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Rcy1/Pof6 ubiquitin ligase complex","termid":"GO:0097667"}


id: GO:0042895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete antibiotic transmembrane transporter activity (obsolete GO:0042895)","synonyms":[{"name":"antibiotic transporter activity","type":"related"}],"termid":"GO:0042895"}


id: PBO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in the current viewer tco1 gene is hidden behind SPNCRNA.600","termid":"PBO:0002126"}


id: PBO:0086257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates expression of Fo-F1 ATP synthase subunits; involved in the regulation of mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) of the Fo-F1 ATP synthase; functions with Nca3p","termid":"PBO:0086257"}


id: PBO:0055481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2914","termid":"PBO:0055481"}


id: GO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an AV node cell to an bundle of His cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"AV node cell-bundle of His cell adhesion involved in cell communication","synonyms":[{"name":"atrioventricular node cell-bundle of His cell adhesion involved in cell communication","type":"exact"}],"termid":"GO:0086072"}


id: GO:0097497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of negative regulation of cell adhesion that results in blood vessel endothelial cells splitting off from an existing endothelial sheet.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"blood vessel endothelial cell delamination","termid":"GO:0097497"}


id: PR:Q9P7L0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7L0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21C3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.14c","synonyms":[{"name":"Spom972h-SPBC21C3.14c","type":"exact"}],"termid":"PR:Q9P7L0"}


id: GO:0048249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of phosphate from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:jid","PMID:8709965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transmembrane transporter activity","termid":"GO:0015114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity phosphate transmembrane transporter activity","synonyms":[{"name":"high affinity phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0048249"}


id: PBO:0044651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 2","termid":"PBO:0044651"}


id: GO:0032089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a NACHT (NAIP, CIITA, HET-E and TP1) domain. The NACHT domain consists of seven distinct conserved motifs, including an ATP/GTPase specific P-loop, a Mg2+-binding site and five more specific motifs.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NACHT domain binding","termid":"GO:0032089"}


id: PBO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 8","termid":"PBO:0060020"}


id: GO:0033284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carboxylic acid(out/in) = ADP + phosphate + carboxylic acid(in/out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled organic acid transmembrane transporter activity","termid":"GO:0033283"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled carboxylic acid transmembrane transporter activity","synonyms":[{"name":"ATP-dependent carboxylic acid transporter activity","type":"exact"},{"name":"carboxylic acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0033284"}


id: PATO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume quality inhering in a homogeneous substance containing 6.02 x 1023 atoms or molecules by virtue of the amount of 3-dimensional space it occupies.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Molar_volume"],"direct_ancestors":[{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molar volume","termid":"PATO:0001680"}


id: PBO:0042512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 17, pseudogene","termid":"PBO:0042512"}


id: GO:0106312
data:
  {"annotated_genes":["SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93748],"is_not":false,"summary":null,"term":"GO:0106312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydrofolate + NAD + = 5,10-methylenetetrahydrofolate + NADH + H+.","definition_xrefs":["RHEA:19821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:0004489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase NADH activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106312","terms_by_termid":{"GO:0106312":null}}


id: GO:0005823
data:
  {"annotated_genes":["SJAG_04901","SJAG_04781","SJAG_02795","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90740],"is_not":false,"summary":null,"term":"GO:0005823"},{"annotations":[92220,95141,93609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the central plaque is embedded in the nuclear envelope.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005816"],"is_obsolete":false,"name":"central plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005823","terms_by_termid":{"GO:0005823":null,"GO:0061493":null}}


id: PBO:0061250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 2","termid":"PBO:0061250"}


id: PBO:0004182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18S rRNA dimethylase (predicted)","termid":"PBO:0004182"}


id: PBO:0073561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 4","termid":"PBO:0073561"}


id: PBO:0018173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca2 (predicted)","termid":"PBO:0018173"}


id: GO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric proximal tubule morphogenesis","termid":"GO:0039011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric proximal tubule identity","termid":"GO:0039004"}


id: PBO:0072716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 3","termid":"PBO:0072716"}


id: PBO:0071467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 8","termid":"PBO:0071467"}


id: GO:1990014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Square array of closely spaced intramembrane particles, 4-6 nm in size, that form supramolecular aggregates found in the plasma membrane of astrocytes, skeletal muscle and epithelial cells. They have been shown to contain aquaporins (water channels).","definition_xrefs":["NIF_Subcellular:sao1747012216","PMID:22718347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"orthogonal array","synonyms":[{"name":"OAP","type":"related"},{"name":"orthogonal array of particles","type":"exact"},{"name":"square array","type":"related"}],"termid":"GO:1990014"}


id: GO:1902878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in spinal cord association neuron specification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:21730158"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:1902878)","synonyms":[{"name":"regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:1902878"}


id: GO:0006547
data:
  {"annotated_genes":["SJAG_03775","SJAG_01346","SJAG_00248","SJAG_00832","SJAG_04747","SJAG_00592","SJAG_03055","SJAG_01137","SJAG_02400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97567,75561,74745,77061,70958,105541,103047,78635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[98878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00248":null,"SJAG_00592":null,"SJAG_00832":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_02400":null,"SJAG_03055":null,"SJAG_03775":null,"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"histidine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Histidine"],"synonyms":[{"name":"histidine metabolism","type":"exact"}],"termid":"GO:0006547","terms_by_termid":{"GO:0000105":null,"GO:0052707":null}}


id: FYPO:0005145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which proteasome regulatory particle binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"abolished proteasome regulatory particle binding","synonyms":[{"name":"proteasome regulatory particle binding abolished","type":"exact"}],"termid":"FYPO:0005145"}


id: GO:2000976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in detection of glucose.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in detection of glucose (obsolete GO:2000976)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in detection of glucose","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose detection","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose perception","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in detection of glucose","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose detection","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in detection of glucose","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose detection","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in detection of glucose","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in detection of glucose","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose detection","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose sensing","type":"related"}],"termid":"GO:2000976"}


id: PBO:0076357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 4","termid":"PBO:0076357"}


id: PBO:0053003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 2","termid":"PBO:0053003"}


id: GO:0050237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + O2 = pyridoxal + H2O2.","definition_xrefs":["EC:1.1.3.12","MetaCyc:PYRIDOXINE-4-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyridoxine 4-oxidase activity","secondary_identifiers":["RHEA:15033"],"synonyms":[{"name":"pyridoxin 4-oxidase activity","type":"related"},{"name":"pyridoxine:oxygen 4-oxidoreductase activity","type":"related"},{"name":"pyridoxol 4-oxidase activity","type":"related"}],"termid":"GO:0050237"}


id: PBO:0060002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 22","termid":"PBO:0060002"}


id: GO:0033173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a member of the NFAT protein family as a consequence of NFAT dephosphorylation by Ca(2+)-activated calcineurin. The cascade begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin dephosphorylates multiple phosphoserine residues on NFAT, resulting in the translocation of NFAT to the nucleus. The cascade ends with regulation of transcription by NFAT. The calcineurin-NFAT cascade lies downstream of many cell surface receptors, including G protein-coupled receptors (GPCRs) and receptor tyrosine kinases (RTKs) that signal to mobilize calcium ions (Ca2+).","definition_xrefs":["PMID:12975316","GOC:mah","GOC:lm","PMID:15928679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcineurin-NFAT signaling cascade","synonyms":[{"name":"calcineurin-NFAT signaling pathway","type":"related"},{"name":"calcineurin-NFAT signalling pathway","type":"related"}],"termid":"GO:0033173"}


id: GO:0061777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A DNA binding activity in which a protein complex interacts selectively and non-covalently with single DNA duplex to tightly encircle the DNA.","definition_xrefs":["GOC:dph","GOC:vw","PMID:1349852"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA clamp activity (obsolete GO:0061777)","termid":"GO:0061777"}


id: PBO:0053190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptin receptor overlapping transcript like 1","termid":"PBO:0053190"}


id: SO:0000582
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding an rRNA cleavage snoRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_cleavage_snoRNA_primary_transcript","synonyms":[{"name":"rRNA cleavage snoRNA primary transcript","type":"exact"}],"termid":"SO:0000582"}


id: GO:0051954
data:
  {"annotated_genes":["SJAG_05346","SJAG_03591","SJAG_00991","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105667,94202,87187,88741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[88742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[94203,87188,88743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"positively_regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amine transport","type":"narrow"},{"name":"stimulation of amine transport","type":"narrow"},{"name":"up regulation of amine transport","type":"exact"},{"name":"up-regulation of amine transport","type":"exact"},{"name":"upregulation of amine transport","type":"exact"}],"termid":"GO:0051954","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0062091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the chloroplast inner membrane and facing the stroma that is associated with the chloroplast inner membrane translocase complex and provides the ATPase motor activity to drive import of proteins into the chloroplast stroma.","definition_xrefs":["PMID:30309901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Ycf2/FtsHi complex","synonyms":[{"name":"TIC complex associated chloroplast protein import motor","type":"exact"}],"termid":"GO:0062091"}


id: GO:0061288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of the mesonephric capsule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"renal capsule specification","termid":"GO:0072130"},{"relation_name":"part_of","term_name":"mesonephric capsule formation","termid":"GO:0061287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule specification","termid":"GO:0061288"}


id: PBO:0038611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 7","termid":"PBO:0038611"}


id: PBO:0073185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SELENOO antisense RNA 1","termid":"PBO:0073185"}


id: GO:1990449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A G protein-coupled signalling receptor complex consisting of the calcitonin receptor and a receptor activity-modifying protein (RAMP). Amylin is produced in beta-islet cells of the pancreas. It is implicated in selective inhibition of insulin-stimulated glucose utilization and glycogen deposition in muscle, gastric emptying, gastric acid secretion, postprandial glucagon secretion and food intake and aids weight loss.","definition_xrefs":["GOC:bhm","PMID:10871269"],"gene_count":0,"genotype_count":0,"name":"obsolete amylin receptor (obsolete GO:1990449)","synonyms":[{"name":"AMY1 receptor","type":"narrow"},{"name":"AMY2 receptor","type":"narrow"},{"name":"AMY3 receptor","type":"narrow"},{"name":"CALCR-RAMP1 receptor","type":"narrow"},{"name":"CALCR-RAMP2 receptor","type":"narrow"},{"name":"CALCR-RAMP3 receptor","type":"narrow"},{"name":"amylin receptor","type":"exact"}],"termid":"GO:1990449"}


id: PBO:0063777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 4","termid":"PBO:0063777"}


id: FYPO:0001327
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114546,114547,114548],"is_not":false,"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during vegetative growth","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000762"],"single_locus_annotated_genes":["SJAG_01956","SJAG_03575","SJAG_03351"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation during vegetative growth","type":"related"},{"name":"increased protein level during mitotic cell cycle","type":"related"},{"name":"protein accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001327","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: GO:0002728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of natural killer cell cytokine production","termid":"GO:0002727"},{"relation_name":"negatively_regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell cytokine production","synonyms":[{"name":"down regulation of natural killer cell cytokine production","type":"exact"},{"name":"down-regulation of natural killer cell cytokine production","type":"exact"},{"name":"downregulation of natural killer cell cytokine production","type":"exact"},{"name":"inhibition of natural killer cell cytokine production","type":"narrow"},{"name":"negative regulation of NK cell cytokine production","type":"exact"}],"termid":"GO:0002728"}


id: PBO:0041267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q C chain","termid":"PBO:0041267"}


id: PBO:0030457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nickel_import","termid":"PBO:0030457"}


id: GO:0097430
data:
  {"annotated_genes":["SJAG_03079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96769],"is_not":false,"summary":null,"term":"GO:0097430"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions from outside of a cell, across an ascospore-type prospore membrane and into the cytosol.","definition_xrefs":["GOC:vw","GOC:al","PMID:21828039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03079":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"copper ion import across prospore membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper ion import into ascospore-type prospore","type":"related"},{"name":"copper ion transport into forespores","type":"related"}],"termid":"GO:0097430","terms_by_termid":{"GO:0097430":null}}


id: PBO:0067410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 520, pseudogene","termid":"PBO:0067410"}


id: PBO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Srp1 family splicing factor (predicted)","termid":"PBO:0000702"}


id: GO:1990208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the RNA levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18703740","PMID:12182338"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of RNA levels in host (obsolete GO:1990208)","termid":"GO:1990208"}


id: GO:0098626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + CH3SeO2H => NADP+ + CH3SeOH + H2O.","definition_xrefs":["PMID:11782468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylseleninic acid reductase activity","secondary_identifiers":["Reactome:R-HSA-5263616"],"termid":"GO:0098626"}


id: PBO:0063789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 14","termid":"PBO:0063789"}


id: PBO:0002663
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.137","termid":"PBO:0002663"}


id: GO:0010541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the base towards the apex of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acropetal auxin transport","termid":"GO:0010541"}


id: PBO:0050326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 28","termid":"PBO:0050326"}


id: GO:0106394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"negatively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of palmitic acid catabolic process","termid":"GO:0106394"}


id: PBO:0055485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2918","termid":"PBO:0055485"}


id: PBO:0034377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-innervated_by","termid":"PBO:0034377"}


id: PBO:0053884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1164","termid":"PBO:0053884"}


id: PBO:0075394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp7 transcription factor","termid":"PBO:0075394"}


id: GO:0102130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a malonyl-[acp] = S-adenosyl-L-homocysteine + a malonyl-[acp] methyl ester.","definition_xrefs":["RHEA:17105","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"malonyl-CoA methyltransferase activity","secondary_identifiers":["EC:2.1.1.197","MetaCyc:RXN-11475"],"termid":"GO:0102130"}


id: PBO:0003331
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cockayne syndrome","termid":"PBO:0003331"}


id: GO:0010520
data:
  {"annotated_genes":["SJAG_00266","SJAG_01677","SJAG_03438","SJAG_02592","SJAG_04205"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84697,89777,111313],"is_not":false,"summary":null,"term":"GO:0010520"},{"annotations":[103150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[103153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[84591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01677":null,"SJAG_02592":null,"SJAG_03438":null,"SJAG_04205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010520","terms_by_termid":{"GO:0010520":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null}}


id: PBO:0027902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_centromeric_outer_repeat_transcript-derived_siRNA_level","termid":"PBO:0027902"}


id: PBO:0055466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2899","termid":"PBO:0055466"}


id: PBO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 1","termid":"PBO:0060730"}


id: PBO:0005701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase Adg3 (predicted)","termid":"PBO:0005701"}


id: GO:0048697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:lm","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"},{"relation_name":"positively_regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting in absence of injury","synonyms":[{"name":"activation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"stimulation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"up regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"up-regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"upregulation of collateral sprouting in the absence of injury","type":"exact"}],"termid":"GO:0048697"}


id: GO:1905086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bioluminescence.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:10913092","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of bioluminescence","termid":"GO:1905085"},{"relation_name":"negatively_regulates","term_name":"bioluminescence","termid":"GO:0008218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bioluminescence","synonyms":[{"name":"down regulation of bioluminescence","type":"exact"},{"name":"down-regulation of bioluminescence","type":"exact"},{"name":"downregulation of bioluminescence","type":"exact"},{"name":"inhibition of bioluminescence","type":"narrow"}],"termid":"GO:1905086"}


id: PBO:0062491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 7 pseudogene","termid":"PBO:0062491"}


id: PBO:0061696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 214","termid":"PBO:0061696"}


id: PBO:0060887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nestin","termid":"PBO:0060887"}


id: PBO:0031511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_during_nitrogen_starvation","termid":"PBO:0031511"}


id: MOD:00061
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to N-acetyl-L-threonine.","definition_xrefs":["PubMed:11857757","PubMed:2106685","PubMed:12175151","RESID:AA0052","PubMed:11999733","PubMed:14730666","PubMed:15350136","PubMed:6997045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-threonine","termid":"MOD:01186"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-acetamido-3-hydroxybutanoic acid","type":"exact"},{"name":"2-acetylamino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES N-acetylthreonine","type":"exact"},{"name":"N-acetyl-L-threonine","type":"exact"},{"name":"N-acetylated L-threonine","type":"exact"},{"name":"N-acetylthreonine","type":"exact"},{"name":"N-methylcarbonylthreonine","type":"exact"},{"name":"NAcThr","type":"exact"}],"termid":"MOD:00061"}


id: PBO:0092025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S3","termid":"PBO:0092025"}


id: PBO:0083505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF BDF2/YDL070W","termid":"PBO:0083505"}


id: GO:0030076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"light-harvesting complex","secondary_identifiers":["Wikipedia:Light-harvesting_complex"],"synonyms":[{"name":"antenna complex","type":"related"}],"termid":"GO:0030076"}


id: GO:0071014
data:
  {"annotated_genes":["SJAG_00147","SJAG_01408","SJAG_03210","SJAG_02279","SJAG_03601","SJAG_02317","SJAG_04497","SJAG_01870","SJAG_00206","SJAG_02843","SJAG_01301","SJAG_02078","SJAG_02844","SJAG_04427","SJAG_05212","SJAG_05025","SJAG_04783","SJAG_03469","SJAG_00597","SJAG_03711","SJAG_04694","SJAG_05235","SJAG_04055","SJAG_02227","SJAG_01186","SJAG_01810","SJAG_02304","SJAG_00911","SJAG_02905","SJAG_00859","SJAG_03427","SJAG_04385","SJAG_00446","SJAG_00414","SJAG_02295","SJAG_00639","SJAG_00322","SJAG_03687","SJAG_00563","SJAG_00564","SJAG_04117","SJAG_03301","SJAG_01214","SJAG_04898","SJAG_02722","SJAG_01008"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69808,71783,72494,76491,76679,77082,83350,83883,83890,88786,90306,90553,90713,90770,90975,91805,92196,93351,93774,93841,94362,95912,97798,97957,99286,99760,100720,101070,101744,102353,102832,104382,105198,105746,106386,106845,108184,110516,110517,110989,111884,112202,113823],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[85689,77243,104029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and three snRNPs, either U2 or U12, U5, and either U6 or U6atac.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897","PMID:19239890","GOC:ab","PMID:20149226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00206":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00563":null,"SJAG_00564":null,"SJAG_00597":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01186":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01408":null,"SJAG_01810":null,"SJAG_01870":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02317":null,"SJAG_02722":null,"SJAG_02843":null,"SJAG_02844":null,"SJAG_02905":null,"SJAG_03210":null,"SJAG_03301":null,"SJAG_03427":null,"SJAG_03469":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_04055":null,"SJAG_04117":null,"SJAG_04385":null,"SJAG_04427":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_05025":null,"SJAG_05212":null,"SJAG_05235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"post-mRNA release spliceosomal complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal complex I","type":"narrow"}],"termid":"GO:0071014","terms_by_termid":{"GO:0071008":null,"GO:0071014":null}}


id: FYPO:0002298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable germinated spores with elongated germ tubes, and in which some cells divide once and others do not divide. In the cells that divide once, an inviable cell forms from the growing end of the germ tube, but does not divide further.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including divided and undivided germinated spores, with elongated germ tubes (obsolete FYPO:0002298)","termid":"FYPO:0002298"}


id: GO:0072491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"toluene-containing compound catabolic process","synonyms":[{"name":"toluene and derivative catabolic process","type":"exact"},{"name":"toluene-containing compound breakdown","type":"exact"},{"name":"toluene-containing compound catabolism","type":"exact"},{"name":"toluene-containing compound degradation","type":"exact"}],"termid":"GO:0072491"}


id: GO:2000692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed maturation","termid":"GO:2000692"}


id: GO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a polysaccharide and transmitting the signal to initiate an innate immune response. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"polysaccharide immune receptor activity","synonyms":[{"name":"polysaccharide receptor activity","type":"broad"}],"termid":"GO:0001873"}


id: MOD:01371
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE bcecause identical and redundant with MOD:00851. Remap to MOD:00851.","definition_xrefs":["PubMed:8382902"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01371 deamidation in presence of O18 (obsolete MOD:01371)","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"}],"termid":"MOD:01371"}


id: PBO:0027917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_growth_on_myriocin","termid":"PBO:0027917"}


id: FYPO:0002855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-cysteine ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased glutamate-cysteine ligase activity","synonyms":[{"name":"reduced glutamate-cysteine ligase activity","type":"exact"}],"termid":"FYPO:0002855"}


id: PBO:0058527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6072","termid":"PBO:0058527"}


id: GO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"}


id: PBO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derives_into","termid":"PBO:0034330"}


id: GO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase complex","termid":"GO:0009320"}


id: GO:2000082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-ascorbic acid biosynthetic process.","definition_xrefs":["PMID:19395407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"regulation of L-ascorbic acid biosynthetic process","synonyms":[{"name":"regulation of L-ascorbic acid anabolism","type":"exact"},{"name":"regulation of L-ascorbic acid biosynthesis","type":"exact"},{"name":"regulation of L-ascorbic acid formation","type":"exact"},{"name":"regulation of L-ascorbic acid synthesis","type":"exact"},{"name":"regulation of ascorbate biosynthesis","type":"exact"},{"name":"regulation of ascorbate biosynthetic process","type":"exact"},{"name":"regulation of vitamin C biosynthesis","type":"exact"},{"name":"regulation of vitamin C biosynthetic process","type":"exact"}],"termid":"GO:2000082"}


id: PBO:0064607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 1","termid":"PBO:0064607"}


id: PBO:0089331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit d","termid":"PBO:0089331"}


id: PBO:0084985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP+ dependent arabinose dehydrogenase; involved in carbohydrate metabolism; purified as homodimer; naturally occurs with a N-terminus degradation product","termid":"PBO:0084985"}


id: PBO:0042653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 1","termid":"PBO:0042653"}


id: PR:O00091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucose-6-phosphate 1-dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.18","secondary_identifiers":["UniProtKB:O00091"],"synonyms":[{"name":"G6PD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC3A12.18","type":"related"},{"name":"Spom972h-G6PD","type":"exact"}],"termid":"PR:O00091"}


id: GO:0047885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesol = 2-cis,6-trans-farnesol.","definition_xrefs":["RHEA:13401","EC:5.2.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"farnesol 2-isomerase activity","secondary_identifiers":["MetaCyc:FARNESOL-2-ISOMERASE-RXN","KEGG_REACTION:R03265"],"synonyms":[{"name":"2-trans,6-trans-farnesol 2-cis-trans-isomerase activity","type":"related"},{"name":"farnesol isomerase activity","type":"related"}],"termid":"GO:0047885"}


id: SO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is not in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct","termid":"SO:0001514"}


id: GO:0030155
data:
  {"annotated_genes":["SJAG_01778","SJAG_03484","SJAG_04191","SJAG_03802","SJAG_00910","SJAG_02380","SJAG_00926","SJAG_01253","SJAG_03473","SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93904,94612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022408"},{"annotations":[98803,101454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060257"},{"annotations":[103805,106482,109157,111175,101098,103925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell adhesion receptor regulator activity","type":"related"}],"termid":"GO:0030155","terms_by_termid":{"GO:0022408":null,"GO:0060257":null,"GO:1900735":null}}


id: GO:1990258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by addition of a methyl group to an glutamine residue.","definition_xrefs":["PMID:24352239"],"gene_count":0,"genotype_count":0,"name":"obsolete histone glutamine methylation (obsolete GO:1990258)","termid":"GO:1990258"}


id: PBO:0038751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 1B","termid":"PBO:0038751"}


id: PBO:0039582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANO1 antisense RNA 1","termid":"PBO:0039582"}


id: PBO:0003614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ/DUF1977 DNAJB12 homolog (predicted)","termid":"PBO:0003614"}


id: PBO:0077849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1","termid":"PBO:0077849"}


id: PBO:0036330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl2","termid":"PBO:0036330"}


id: PATO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Polyploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploid","termid":"PATO:0001377"}


id: PBO:0066265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 5","termid":"PBO:0066265"}


id: PBO:0078672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 5-1","termid":"PBO:0078672"}


id: PBO:0014587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanol-dependent mutant protein Etd1","termid":"PBO:0014587"}


id: PBO:0077079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor molecule 2","termid":"PBO:0077079"}


id: GO:1904614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biphenyl stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23196670","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biphenyl","termid":"GO:1904614"}


id: PBO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 family Ran GEF","termid":"PBO:0090709"}


id: PBO:0083125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichyl pyrophosphate (Dol-P-P) phosphatase; cleaves the anhydride linkage in Dol-P-P; involved in  synthesis of Dol-P-P-linked oligosaccharide intermediate required for protein N-glycosylation; has a luminally oriented active site in the ER; mutation affects vesicular transport, membrane and cell wall biogenesis and lipid homeostasis","termid":"PBO:0083125"}


id: GO:1901335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"lactone catabolic process","synonyms":[{"name":"lactone breakdown","type":"exact"},{"name":"lactone catabolism","type":"exact"},{"name":"lactone degradation","type":"exact"}],"termid":"GO:1901335"}


id: PBO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA decapping complex catalytic subunit Dcp2","termid":"PBO:0001561"}


id: PBO:0087616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation, chromatin binding of condensin, tRNA gene clustering at the nucleolus, and silencing at the mating type locus; required for replication slow zone (RSZ) breakage following Mec1p inactivation","termid":"PBO:0087616"}


id: GO:0022897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a peptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"proton-dependent peptide secondary active transmembrane transporter activity","synonyms":[{"name":"hydrogen/oligopeptide symporter","type":"related"}],"termid":"GO:0022897"}


id: PBO:0080136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0080136"}


id: PBO:0077650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 2","termid":"PBO:0077650"}


id: GO:0022840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narrow pore channel activity","termid":"GO:0022842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"leak channel activity","termid":"GO:0022840"}


id: PBO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 115","termid":"PBO:0071113"}


id: PBO:0030974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation","termid":"PBO:0030974"}


id: GO:0052569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont nitric oxide production (obsolete GO:0052569)","synonyms":[{"name":"response to defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052569"}


id: PBO:0087695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing","termid":"PBO:0087695"}


id: GO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with platelet-derived growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0038023","GO:0016740","GO:0004672","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"platelet-derived growth factor receptor activity","synonyms":[{"name":"PDGF receptor activity","type":"exact"},{"name":"PDGF-activated receptor activity","type":"exact"},{"name":"PDGFR activity","type":"exact"},{"name":"platelet-derived growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0005017"}


id: PBO:0089439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII adaptor Erv29","termid":"PBO:0089439"}


id: GO:0010273
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70596],"is_not":false,"summary":null,"term":"GO:0010273"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of copper ion. These include transport of copper away from sensitive areas and to compartments or complexes whose purpose is sequestration of copper ion.","definition_xrefs":["GOC:kmv","PMID:16367966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of copper ion","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010273","terms_by_termid":{"GO:0010273":null}}


id: PBO:0051324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-4 (pseudogene)","termid":"PBO:0051324"}


id: PBO:0088834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly NADPH-ferredoxin reductase Arh1","termid":"PBO:0088834"}


id: PBO:0077764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 divergent transcript","termid":"PBO:0077764"}


id: FYPO:0002947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the fungal-type cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall","termid":"FYPO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002946"],"is_obsolete":false,"name":"abnormal cell wall morphology","synonyms":[{"name":"cell wall morphology: abnormal","type":"related"}],"termid":"FYPO:0002947"}


id: MOD:01275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-lysine residue.","definition_xrefs":["Unimod:276#K","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-[4-(2-aminoethyl)benzenesulfonyl]lysine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01275"}


id: PR:O74394
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L33, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L39, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.08c","secondary_identifiers":["UniProtKB:O74394"],"synonyms":[{"name":"SPBC4F6.08c","type":"related"},{"name":"Spom972h-MRPL33","type":"exact"}],"termid":"PR:O74394"}


id: PBO:0052524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 38","termid":"PBO:0052524"}


id: GO:0098817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell induced by the evoked release of many vesicles of excitatory neurotransmitter at the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"evoked excitatory postsynaptic potential","termid":"GO:0098817"}


id: PBO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein alpha subunit","termid":"PBO:0002590"}


id: GO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"is_a","term_name":"regulation of chylomicron remnant clearance","termid":"GO:0090320"},{"relation_name":"positively_regulates","term_name":"chylomicron remnant clearance","termid":"GO:0034382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chylomicron remnant clearance","termid":"GO:0090321"}


id: PBO:0074926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 94","termid":"PBO:0074926"}


id: FYPO:0007625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which does not contain a detectable mitochondrial respiratory chain complex III.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex III absent from cell","synonyms":[{"name":"absent respiratory complex III","type":"exact"},{"name":"mitochondrial respiratory chain complex III absent from cell during mitotic cell cycle","type":"related"},{"name":"mitochondrial respiratory chain complex III absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0007625"}


id: PBO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16 small nucleolar RNA","termid":"PBO:0004486"}


id: GO:1905168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair via homologous recombination.","definition_xrefs":["GOC:TermGenie","PMID:12023299","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via homologous recombination","termid":"GO:0010569"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of double-strand break repair","termid":"GO:2000781"},{"relation_name":"positively_regulates","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"positive regulation of double-strand break repair via homologous recombination","synonyms":[{"name":"activation of HDR","type":"narrow"},{"name":"activation of HRR","type":"narrow"},{"name":"activation of Rad51-dependent recombinational repair","type":"narrow"},{"name":"activation of Rhp51-dependent recombinational repair","type":"narrow"},{"name":"activation of double-strand break repair via homologous recombination","type":"narrow"},{"name":"activation of homologous recombinational repair","type":"narrow"},{"name":"activation of homology-directed repair","type":"narrow"},{"name":"positive regulation of HDR","type":"exact"},{"name":"positive regulation of HRR","type":"exact"},{"name":"positive regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"positive regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"positive regulation of homologous recombinational repair","type":"exact"},{"name":"positive regulation of homology-directed repair","type":"exact"},{"name":"up regulation of HDR","type":"exact"},{"name":"up regulation of HRR","type":"exact"},{"name":"up regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"up regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"up regulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"up regulation of homologous recombinational repair","type":"exact"},{"name":"up regulation of homology-directed repair","type":"exact"},{"name":"up-regulation of HDR","type":"exact"},{"name":"up-regulation of HRR","type":"exact"},{"name":"up-regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"up-regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"up-regulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of homologous recombinational repair","type":"exact"},{"name":"up-regulation of homology-directed repair","type":"exact"},{"name":"upregulation of HDR","type":"exact"},{"name":"upregulation of HRR","type":"exact"},{"name":"upregulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"upregulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"upregulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of homologous recombinational repair","type":"exact"},{"name":"upregulation of homology-directed repair","type":"exact"}],"termid":"GO:1905168"}


id: PBO:0076438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 14","termid":"PBO:0076438"}


id: PBO:0057142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 221","termid":"PBO:0057142"}


id: MOD:01836
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-[([1-(6-nitro-2H-1,3-benzodioxol-5-yl)ethoxy]carbonyl]lysine.","definition_xrefs":["PubMed:20218600","PubMed:21271704","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-[([1-(6-nitro-2H-1,3-benzodioxol-5-yl)ethoxy]carbonyl]lysine","synonyms":[{"name":"(2S)-2-amino-6-[([1-(6-nitro-1,3-benzodioxol-5-yl)ethoxy]carbonyl)amino]hexanoic acid","type":"exact"},{"name":"[(alpha-methyl-6-nitro-piperonyloxy)carbonyl]lysine","type":"exact"}],"termid":"MOD:01836"}


id: PBO:0011096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase (predicted)","termid":"PBO:0011096"}


id: PATO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that exists by virtue of the luminous intensity per unit area projected in a given direction.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Luminance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luminous flux","termid":"PATO:0001296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminance","termid":"PATO:0001718"}


id: GO:0097333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an olanzapine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to olanzapine","termid":"GO:0097333"}


id: FYPO:0001519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A molecular function phenotype in which the observed rate of gamma-glutamyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal gamma-glutamyltransferase activity (obsolete FYPO:0001519)","synonyms":[{"name":"abnormal GGT activity","type":"broad"},{"name":"abnormal gamma-glutamyl transpeptidase activity","type":"exact"}],"termid":"FYPO:0001519"}


id: PATO:0001625
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functional quality held by the bearer when the latter exhibits increased ability to perform a regular function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functional","termid":"PATO:0001510"},{"relation_name":"is_a","term_name":"having extra function","termid":"PATO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased functionality","synonyms":[{"name":"high functionality","type":"exact"}],"termid":"PATO:0001625"}


id: PBO:0059325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 10","termid":"PBO:0059325"}


id: PBO:0086544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR029W is not an essential gene","termid":"PBO:0086544"}


id: GO:0042761
data:
  {"annotated_genes":["SJAG_02717","SJAG_02885","SJAG_01458","SJAG_01300","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72197,73131,76489,87393,98720],"is_not":false,"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:7744868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty acid metabolic process","termid":"GO:0000038"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"very long-chain fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5080"],"synonyms":[{"name":"very-long-chain fatty acid anabolism","type":"exact"},{"name":"very-long-chain fatty acid biosynthesis","type":"exact"},{"name":"very-long-chain fatty acid biosynthetic process","type":"exact"},{"name":"very-long-chain fatty acid formation","type":"exact"},{"name":"very-long-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0042761","terms_by_termid":{"GO:0042761":null}}


id: FYPO:0002182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and spheroid vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and spheroid cells (obsolete FYPO:0002182)","synonyms":[{"name":"inviable mixed population including spores, germinated spores and rounded cells","type":"exact"}],"termid":"FYPO:0002182"}


id: GO:1900993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (-)-secologanin.","definition_xrefs":["UniPathway:UPA00328","GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin catabolic process (obsolete GO:1900993)","synonyms":[{"name":"(-)-secologanin breakdown","type":"exact"},{"name":"(-)-secologanin catabolism","type":"exact"},{"name":"(-)-secologanin degradation","type":"exact"}],"termid":"GO:1900993"}


id: GO:0042361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of menaquinones, any of the quinone-derived compounds synthesized by intestinal bacteria. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones have vitamin K activity and are known as vitamin K2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menaquinone metabolic process","termid":"GO:0009233"},{"relation_name":"is_a","term_name":"quinone catabolic process","termid":"GO:1901662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"menaquinone catabolic process","synonyms":[{"name":"menaquinone breakdown","type":"exact"},{"name":"menaquinone catabolism","type":"exact"},{"name":"menaquinone degradation","type":"exact"},{"name":"menatetrenone catabolic process","type":"exact"},{"name":"menatetrenone catabolism","type":"exact"},{"name":"multiprenylmenaquinone catabolic process","type":"exact"},{"name":"multiprenylmenaquinone catabolism","type":"exact"},{"name":"vitamin K2 catabolic process","type":"exact"},{"name":"vitamin K2 catabolism","type":"exact"}],"termid":"GO:0042361"}


id: GO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a lipid antigen to the antigen binding groove of an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the CD1 gene family.","definition_xrefs":["GOC:add","PMID:15928680","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex assembly","termid":"GO:0065005"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex assembly","termid":"GO:0002398"},{"relation_name":"part_of","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lipid antigen assembly with MHC class Ib protein complex","termid":"GO:0002493"}


id: PBO:0069084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 331, pseudogene","termid":"PBO:0069084"}


id: PBO:0070880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 12","termid":"PBO:0070880"}


id: PBO:0070339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 11","termid":"PBO:0070339"}


id: PBO:0047984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2","termid":"PBO:0047984"}


id: GO:0003912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["EC:2.7.7.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"DNA nucleotidylexotransferase activity","secondary_identifiers":["MetaCyc:DNA-NUCLEOTIDYLEXOTRANSFERASE-RXN"],"synonyms":[{"name":"TdT","type":"related"},{"name":"addase activity","type":"related"},{"name":"deoxynucleotidyl terminal transferase activity","type":"related"},{"name":"deoxyribonucleic acid nucleotidyltransferase activity","type":"related"},{"name":"deoxyribonucleic nucleotidyltransferase activity","type":"related"},{"name":"nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"related"},{"name":"terminal addition enzyme activity","type":"related"},{"name":"terminal deoxynucleotide transferase activity","type":"related"},{"name":"terminal deoxynucleotidyltransferase activity","type":"related"},{"name":"terminal deoxyribonucleotidyltransferase activity","type":"related"},{"name":"terminal transferase activity","type":"related"}],"termid":"GO:0003912"}


id: GO:0070158
data:
  {"annotated_genes":["SJAG_02977"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72538],"is_not":false,"summary":null,"term":"GO:0070158"}]},"cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA in a mitochondrion, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seryl-tRNA aminoacylation","termid":"GO:0006434"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006520","GO:0140053","GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"mitochondrial seryl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070158","terms_by_termid":{"GO:0070158":null}}


id: GO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + ATP = ADP + dAMP + 2 H+.","definition_xrefs":["EC:2.7.1.76","RHEA:23452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"deoxyadenosine kinase activity","secondary_identifiers":["MetaCyc:DEOXYADENOSINE-KINASE-RXN","KEGG_REACTION:R02089"],"synonyms":[{"name":"ATP:deoxyadenosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyadenosine kinase (phosphorylating)","type":"related"},{"name":"purine-deoxyribonucleoside kinase activity","type":"related"}],"termid":"GO:0004136"}


id: GO:1903848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:22269326","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aorta morphogenesis","termid":"GO:1903847"},{"relation_name":"is_a","term_name":"negative regulation of artery morphogenesis","termid":"GO:1905652"},{"relation_name":"negatively_regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aorta morphogenesis","synonyms":[{"name":"down regulation of aorta morphogenesis","type":"exact"},{"name":"down-regulation of aorta morphogenesis","type":"exact"},{"name":"downregulation of aorta morphogenesis","type":"exact"},{"name":"inhibition of aorta morphogenesis","type":"narrow"}],"termid":"GO:1903848"}


id: GO:0031806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled (metabotropic) histamine receptor.","definition_xrefs":["GOC:mah","PMID:12679144","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"G protein-coupled histamine receptor binding","synonyms":[{"name":"G-protein coupled histamine receptor binding","type":"exact"},{"name":"metabotropic histamine receptor binding","type":"exact"},{"name":"metabotropic histamine receptor ligand","type":"narrow"}],"termid":"GO:0031806"}


id: PBO:0074452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothened, frizzled class receptor","termid":"PBO:0074452"}


id: FYECO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which magnesium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Mg ions","synonyms":[{"name":"magnesium ions added","type":"exact"}],"termid":"FYECO:0000038"}


id: GO:0045333
data:
  {"annotated_genes":["SJAG_01895","SJAG_00438","SJAG_01539","SJAG_MIT09","SJAG_MIT04","SJAG_00985","SJAG_01062","SJAG_00203","SJAG_02176","SJAG_04152","SJAG_01524","SJAG_00836","SJAG_03064","SJAG_00260","SJAG_MIT13","SJAG_00866","SJAG_MIT15","SJAG_03588","SJAG_02398","SJAG_02464","SJAG_01671","SJAG_03290","SJAG_02504","SJAG_02744","SJAG_00542","SJAG_04362","SJAG_07006","SJAG_03920","SJAG_01763","SJAG_05629","SJAG_00976","SJAG_01402","SJAG_00601","SJAG_03490","SJAG_MIT20","SJAG_01190","SJAG_03813","SJAG_02598","SJAG_00080","SJAG_01355","SJAG_00698","SJAG_00522","SJAG_02158","SJAG_00502","SJAG_07003","SJAG_MIT37","SJAG_07007","SJAG_00915","SJAG_03114","SJAG_03163","SJAG_05204","SJAG_04843","SJAG_00133","SJAG_01490","SJAG_01077","SJAG_01753","SJAG_03337","SJAG_02646","SJAG_01922","SJAG_03925","SJAG_02433","SJAG_06382","SJAG_02105","SJAG_04122","SJAG_01630","SJAG_02592","SJAG_MIT03","SJAG_02564","SJAG_02006","SJAG_00755"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90387,109308,103765,113407,83002,94355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009060"},{"annotations":[91923],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043490"},{"annotations":[84748,75031,73501,103458,109713,113979,109295,83759,113959,110482,71697,114002],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[107945],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006120"},{"annotations":[108281,111768,84710,84351],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[74703,85478,99333,110147,103143,113983,75030,108484,112665,113118],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006122"},{"annotations":[92083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006119"},{"annotations":[103953,100219,89282,98935,97087,113986,113995,102997,90230,113991,88691,110872,88277,103085,98289,98906,84659],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[92966,104842,89774,106987],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[70638,74849,70558,101933,70199,108283,71383,77764,85673,113454,73583,95071,84353,108533,74622,73343,111770,72621,84712],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration).","definition_xrefs":["GOC:das","ISBN:0140513590","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy derivation by oxidation of organic compounds","termid":"GO:0015980"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00203":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00502":null,"SJAG_00522":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00698":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01062":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01402":null,"SJAG_01490":null,"SJAG_01524":null,"SJAG_01539":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01763":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02006":null,"SJAG_02105":null,"SJAG_02158":null,"SJAG_02176":null,"SJAG_02398":null,"SJAG_02433":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02592":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03588":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04362":null,"SJAG_04843":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_06382":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"cellular respiration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cellular_respiration"],"synonyms":[{"name":"oxidative metabolic process","type":"exact"},{"name":"oxidative metabolism","type":"exact"},{"name":"respiration","type":"broad"}],"termid":"GO:0045333","terms_by_termid":{"GO:0006099":null,"GO:0006119":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0009060":null,"GO:0042776":null,"GO:0043490":null,"GO:1903715":null}}


id: GO:0034923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-4,5-dicarboxylate + H+ = phenanthrene-4-carboxylate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phenanthrene-4,5-dicarboxylate decarboxylase activity","termid":"GO:0034923"}


id: MOD:01230
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:365#K","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","termid":"MOD:00790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","type":"related"},{"name":"ICPL","type":"related"}],"termid":"MOD:01230"}


id: GO:0097320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane tubulation process occurring in a plasma membrane.","definition_xrefs":["PMID:15252009","GOC:BHF","GOC:pr","PMID:20730103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane tubulation","synonyms":[{"name":"membrane tubulation","type":"broad"},{"name":"vesicle scission","type":"related"}],"termid":"GO:0097320"}


id: PBO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 4","termid":"PBO:0072221"}


id: GO:2000644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor catabolic process","synonyms":[{"name":"regulation of receptor breakdown","type":"exact"},{"name":"regulation of receptor catabolism","type":"exact"},{"name":"regulation of receptor degradation","type":"exact"}],"termid":"GO:2000644"}


id: FYPO:0005516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in regions of euchromatin. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:22990236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in euchromatin","termid":"FYPO:0000854"},{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleosome occupancy in euchromatin","synonyms":[{"name":"decreased nucleosome occupancy in euchromatin during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy in euchromatin during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy in euchromatin","type":"exact"}],"termid":"FYPO:0005516"}


id: PBO:0078188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-1","termid":"PBO:0078188"}


id: PBO:0034465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_magnesium","termid":"PBO:0034465"}


id: GO:0047992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: erythro-5-hydroxy-L-lysine + GTP = 5-phosphonooxy-L-lysine + GDP + 2 H+.","definition_xrefs":["RHEA:19049","EC:2.7.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"hydroxylysine kinase activity","secondary_identifiers":["KEGG_REACTION:R03378","Reactome:R-HSA-6788611","MetaCyc:HYDROXYLYSINE-KINASE-RXN"],"synonyms":[{"name":"GTP:5-hydroxy-L-lysine O-phosphotransferase activity","type":"related"},{"name":"guanosine triphosphate:5-hydroxy-L-lysine O-phosphotransferase activity","type":"related"},{"name":"hydroxylysine kinase (phosphorylating)","type":"related"}],"termid":"GO:0047992"}


id: PBO:0079170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPO associated protein 1","termid":"PBO:0079170"}


id: FYPO:0000122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is abnormal.","definition_xrefs":["PomBase:mah","GO:0000723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal telomere maintenance","termid":"FYPO:0007415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abnormal telomere maintenance during vegetative growth","synonyms":[{"name":"abnormal telomere maintenance during mitotic cell cycle","type":"related"},{"name":"telomere maintenance defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000122"}


id: GO:1905604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:22524708","PMID:30280653","GO_REF:0000058","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood-brain barrier permeability","synonyms":[{"name":"down-regulation of BBB permeability","type":"exact"},{"name":"down-regulation of blood-brain barrier permeability","type":"exact"},{"name":"down-regulation of blood/brain barrier permeability","type":"exact"},{"name":"downregulation of BBB permeability","type":"exact"},{"name":"downregulation of blood-brain barrier permeability","type":"exact"},{"name":"downregulation of blood/brain barrier permeability","type":"exact"},{"name":"inhibition of maintenance of permeability of BBB","type":"narrow"},{"name":"inhibition of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"negative regulation of BBB permeability","type":"exact"},{"name":"negative regulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905604"}


id: PBO:0065892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB39A, member RAS oncogene family","termid":"PBO:0065892"}


id: GO:0052657
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89175],"is_not":false,"summary":null,"term":"GO:0052657"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["EC:2.4.2.8","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"guanine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:25424","KEGG_REACTION:R01229","MetaCyc:GUANPRIBOSYLTRAN-RXN"],"synonyms":[{"name":"6-hydroxypurine phosphoribosyltransferase activity","type":"related"},{"name":"6-mercaptopurine phosphoribosyltransferase activity","type":"related"},{"name":"GMP pyrophosphorylase activity","type":"related"},{"name":"GPRT","type":"related"},{"name":"Transphosphoribosidase activity","type":"broad"},{"name":"guanine-hypoxanthine phosphoribosyltransferase activity","type":"broad"},{"name":"guanosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"guanosine phosphoribosyltransferase activity","type":"related"},{"name":"guanylate pyrophosphorylase activity","type":"related"},{"name":"guanylic pyrophosphorylase activity","type":"related"},{"name":"hypoxanthine-guanine phosphoribosyltransferase activity","type":"broad"},{"name":"purine-6-thiol phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0052657","terms_by_termid":{"GO:0052657":null}}


id: PR:P40921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.02c","synonyms":[{"name":"EF-1-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC29A4.02c","type":"exact"},{"name":"eEF-1B gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40921"}


