# terms

id: PATO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An attachment quality inhering in a bearer by virtue of the bearer's connection or association with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment quality","termid":"PATO:0001435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attached to","synonyms":[{"name":"affixed to","type":"related"},{"name":"attached","type":"exact"}],"termid":"PATO:0001667"}


id: GO:0071314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cocaine","termid":"GO:0042220"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cocaine","termid":"GO:0071314"}


id: PBO:0003124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexitol dehydrogenase (predicted)","termid":"PBO:0003124"}


id: PBO:0053516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 506","termid":"PBO:0053516"}


id: GO:0110142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytosolic ubiquinone biosynthesis complex is composed of enzymes and accessory factors of the ubiquinone biosynthesis pathway and enables synthesis of the extremely hydrophobic molecule ubiquinone. In E. coli, the complex is composed of seven proteins: UbiE, F, G, H, I, J and K.","definition_xrefs":["PMID:28927698","PMID:27060254","GOC:imk","PMID:30686758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ubiquinone biosynthesis complex","synonyms":[{"name":"CoQ metabolon","type":"exact"},{"name":"Ubi complex","type":"exact"}],"termid":"GO:0110142"}


id: PBO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 2","termid":"PBO:0060252"}


id: GO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"regulates","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell mediated cytotoxicity","synonyms":[{"name":"regulation of T cell mediated apoptosis","type":"exact"},{"name":"regulation of T cell mediated cell death","type":"exact"},{"name":"regulation of T cell mediated cell killing","type":"exact"},{"name":"regulation of T cell mediated cytolysis","type":"related"},{"name":"regulation of T lymphocyte mediated cytotoxicity","type":"exact"},{"name":"regulation of T-cell mediated apoptosis","type":"exact"},{"name":"regulation of T-cell mediated cell death","type":"exact"},{"name":"regulation of T-cell mediated cell killing","type":"exact"},{"name":"regulation of T-cell mediated cytolysis","type":"related"},{"name":"regulation of T-cell mediated cytotoxicity","type":"exact"},{"name":"regulation of T-lymphocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001914"}


id: PBO:0056972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26b","termid":"PBO:0056972"}


id: GO:0014032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell development","termid":"GO:0048864"},{"relation_name":"part_of","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell development","termid":"GO:0014032"}


id: GO:0032190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to acrosin, a protein that is found in the acrosomes of sperm and possesses protease and carbohydrate binding activities.","definition_xrefs":["PMID:12398221","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"acrosin binding","secondary_identifiers":["GO:0032191","GO:0032192"],"synonyms":[{"name":"acrosin heavy chain binding","type":"narrow"},{"name":"acrosin light chain binding","type":"narrow"}],"termid":"GO:0032190"}


id: PBO:0046062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 1","termid":"PBO:0046062"}


id: PBO:0082850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper metallochaperone that transfers copper to Sco1p and Cox11p; eventual delivery to cytochrome c oxidase; contains twin cysteine-x9-cysteine motifs; interacts with the MICOS complex, and interaction is promoted by copper ions; human homolog COX17 partially complements yeast null mutant","termid":"PBO:0082850"}


id: GO:0102363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoscopoletin + S-adenosyl-L-methionine = scoparone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"isoscopoletin-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13475"],"termid":"GO:0102363"}


id: PBO:0051207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-38-2","termid":"PBO:0051207"}


id: PBO:0038877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 4","termid":"PBO:0038877"}


id: GO:0003232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bulbus arteriosus over time, from its formation to the mature structure. The bulbus arteriosus is an elastic heart chamber.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bulbus arteriosus development","termid":"GO:0003232"}


id: PBO:0085325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol:ceramide phosphoinositol transferase; required for sphingolipid synthesis; can mutate to confer aureobasidin A resistance; also known as IPC synthase","termid":"PBO:0085325"}


id: GO:0009657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastid organization","synonyms":[{"name":"plastid organisation","type":"exact"},{"name":"plastid organization and biogenesis","type":"related"}],"termid":"GO:0009657"}


id: PBO:0071849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 44","termid":"PBO:0071849"}


id: PBO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (predicted)","termid":"PBO:0003118"}


id: PATO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown and green hues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown green","synonyms":[{"name":"olive green","type":"exact"}],"termid":"PATO:0001942"}


id: PBO:0025475
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria","termid":"PBO:0025475"}


id: GO:0052835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,6-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["PMID:11909533","RHEA:70287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-3,4,6-trisphosphate 1-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855169","MetaCyc:RXN-10984"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"IP3 1-kinase activity","type":"broad"},{"name":"Ins(3,4,6)P3 1-kinase activity","type":"related"},{"name":"inositol 3,4,6-trisphosphate 1-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"ins(3,4,6)P(3) 1-kinase activity","type":"related"}],"termid":"GO:0052835"}


id: PBO:0062970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 13","termid":"PBO:0062970"}


id: PBO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prevacuole/endosomal FYVE tethering component Pep7 (predicted)","termid":"PBO:0002134"}


id: GO:0015896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nalidixic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nalidixic acid is a synthetic antibiotic that interferes with DNA gyrase and inhibits prokaryotic replication.","definition_xrefs":["PMID:12702699","PubChem_Compound:4221","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nalidixic acid transport (obsolete GO:0015896)","termid":"GO:0015896"}


id: PBO:0077994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2B","termid":"PBO:0077994"}


id: GO:0019991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a septate junction, an intercellular junction found in invertebrate epithelia that is characterized by a ladder like appearance in electron micrographs and thought to provide structural strength and to provide a barrier to diffusion of solutes through the intercellular space.","definition_xrefs":["PMID:5272312","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"septate junction assembly","termid":"GO:0019991"}


id: GO:0050834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.","definition_xrefs":["RESID:AA0355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"molybdenum incorporation into molybdenum-molybdopterin complex","termid":"GO:0018315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide","termid":"GO:0050834"}


id: PBO:0081210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 2","termid":"PBO:0081210"}


id: PBO:0049622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 25","termid":"PBO:0049622"}


id: PATO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark green","termid":"PATO:0001249"}


id: GO:0086006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of a cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity","termid":"GO:0005248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}


id: GO:0050821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein stabilization","synonyms":[{"name":"lysosomal protein stabilization","type":"narrow"},{"name":"positive regulation of protein stability","type":"exact"},{"name":"protein sequestering","type":"related"},{"name":"protein stabilisation","type":"exact"},{"name":"protein stabilization activity","type":"related"}],"termid":"GO:0050821"}


id: GO:0002171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of an IgA isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgA receptor activity","termid":"GO:0019766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"low-affinity IgA receptor activity","synonyms":[{"name":"low affinity IgA receptor activity","type":"exact"}],"termid":"GO:0002171"}


id: PBO:0083565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ASK1","termid":"PBO:0083565"}


id: PBO:0069748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1029, pseudogene","termid":"PBO:0069748"}


id: PBO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62 C-terminal like","termid":"PBO:0061675"}


id: PBO:0088226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylation protein Dcn1","termid":"PBO:0088226"}


id: GO:0048364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo.","definition_xrefs":["PO:0009005","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"root system development","termid":"GO:0022622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root development","termid":"GO:0048364"}


id: PBO:0046980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member D, pseudogene","termid":"PBO:0046980"}


id: GO:0072696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination within the telomere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA recombination at telomere","synonyms":[{"name":"activation of telomeric recombination at telomere","type":"narrow"},{"name":"positive regulation of telomeric recombination","type":"exact"},{"name":"up regulation of telomeric recombination at telomere","type":"exact"},{"name":"up-regulation of telomeric recombination at telomere","type":"exact"},{"name":"upregulation of telomeric recombination at telomere","type":"exact"}],"termid":"GO:0072696"}


id: PBO:0060469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase","termid":"PBO:0060469"}


id: GO:0005902
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microvillus","secondary_identifiers":["Wikipedia:Microvillus","NIF_Subcellular:sao671419673"],"synonyms":[{"name":"microvilli","type":"related"}],"termid":"GO:0005902"}


id: PBO:0077258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein family member 8","termid":"PBO:0077258"}


id: PBO:0086729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not conserved in closely related Saccharomyces species; 85% of ORF overlaps verified gene NET1, but does not share all phenotypes; null mutant is slow-growing, sensitive to heat, sorbate, and other various chemicals","termid":"PBO:0086729"}


id: GO:0051414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisol stimulus. Cortisol is the major natural glucocorticoid synthesized in the zona fasciculata of the adrenal cortex; it affects the metabolism of glucose, protein, and fats and has appreciable mineralocorticoid activity. It also regulates the immune system and affects many other functions.","definition_xrefs":["ISBN:0721662544","PMID:11276391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cortisol","synonyms":[{"name":"response to cortisol stimulus","type":"exact"},{"name":"response to hydrocortisone stimulus","type":"exact"}],"termid":"GO:0051414"}


id: GO:0005670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription-activating factor, 30kD (obsolete GO:0005670)","synonyms":[{"name":"transcription-activating factor, 30kD","type":"exact"}],"termid":"GO:0005670"}


id: GO:1901517
data:
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id: GO:0032077
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id: FYPO:0007605
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id: GO:0043902
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id: PBO:0078012
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id: PBO:0029231
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id: GO:0075331
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id: PBO:0056435
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id: FYPO:0003248
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id: PBO:0052612
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id: PBO:0089963
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id: GO:0102628
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id: PBO:0003334
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id: GO:0051465
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id: GO:0090690
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id: PBO:0046204
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id: PBO:0026763
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id: PBO:0047554
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id: GO:0008153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of para-aminobenzoic acid, an intermediate in the synthesis of folic acid, a compound which some organisms, e.g. prokaryotes, eukaryotic microbes, and plants, can synthesize de novo. Others, notably mammals, cannot. In yeast, it is present as a factor in the B complex of vitamins.","definition_xrefs":["ISBN:0198506732","MetaCyc:PWY-6543","PMID:11960743","PMID:11377864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"para-aminobenzoic acid metabolic process","termid":"GO:0046482"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"para-aminobenzoic acid biosynthetic process","synonyms":[{"name":"4-aminobenzoic acid biosynthesis","type":"exact"},{"name":"4-aminobenzoic acid biosynthetic process","type":"exact"},{"name":"PABA biosynthesis","type":"exact"},{"name":"PABA biosynthetic process","type":"exact"},{"name":"p-aminobenzoic acid biosynthesis","type":"exact"},{"name":"p-aminobenzoic acid biosynthetic process","type":"exact"},{"name":"para-aminobenzoic acid anabolism","type":"exact"},{"name":"para-aminobenzoic acid biosynthesis","type":"exact"},{"name":"para-aminobenzoic acid formation","type":"exact"},{"name":"para-aminobenzoic acid synthesis","type":"exact"},{"name":"vitamin Bx biosynthesis","type":"exact"},{"name":"vitamin Bx biosynthetic process","type":"exact"}],"termid":"GO:0008153"}


id: PBO:0065846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 2","termid":"PBO:0065846"}


id: GO:0042027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidylproline (omega=180) = peptidylproline (omega=0).","definition_xrefs":["EC:5.2.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclophilin-type peptidyl-prolyl cis-trans isomerase activity (obsolete GO:0042027)","synonyms":[{"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase activity","type":"exact"}],"termid":"GO:0042027"}


id: PBO:0026629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_MCB_promoters_during_vegetative_growth","termid":"PBO:0026629"}


id: PBO:0016919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug15","termid":"PBO:0016919"}


id: GO:0120234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A glycocalyx on the the endolymphatic surface of a cochlear hair cell that coats the external surface of each stereocilium and maintains a small distance between adjacent stereocilia in the bundle.","definition_xrefs":["GOC:krc","ISBN:9781461268918","PMID:3583936","PMID:31444330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium coat","synonyms":[{"name":"auditory hair cell glycocalyx","type":"broad"},{"name":"stereocilium glycocalyx","type":"exact"}],"termid":"GO:0120234"}


id: PBO:0090929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ferrous iron/manganese transmembrane transporter Pcl1","termid":"PBO:0090929"}


id: PBO:0084210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoaconitase; catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lysine biosynthesis pathway","termid":"PBO:0084210"}


id: PBO:0090459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A-like","termid":"PBO:0090459"}


id: PBO:0091938
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Gamma subunit","termid":"PBO:0091938"}


id: PR:O94673
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC776.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C776.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.05","synonyms":[{"name":"Spom972h-SPBC776.05","type":"exact"}],"termid":"PR:O94673"}


id: PBO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic acid transport protein","termid":"PBO:0000059"}


id: PBO:0052538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 11","termid":"PBO:0052538"}


id: PBO:0050175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 31","termid":"PBO:0050175"}


id: GO:0008659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxytetradecanoyl-[acyl-carrier protein] = tetradecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["GOC:ai","PMID:12368867","RHEA:41892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","termid":"GO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(3R)-3-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity","synonyms":[{"name":"(3R)-hydroxymyristoyl-ACP dehydratase activity","type":"exact"},{"name":"(3R)-hydroxymyristoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"}],"termid":"GO:0008659"}


id: PBO:0065018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2 pseudogene 2","termid":"PBO:0065018"}


id: GO:0097472
data:
  {"annotated_genes":["SJAG_01825","SJAG_00342","SJAG_03967","SJAG_03421","SJAG_00150","SJAG_03048","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91186,77922,97659,100901,78010,75065,78309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016301","GO:0003674","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097472","terms_by_termid":{"GO:0004693":null}}


id: GO:0008650
data:
  {"annotated_genes":["SJAG_03773","SJAG_00722","SJAG_03332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74537,74939,77303],"is_not":false,"summary":null,"term":"GO:0008650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methyluridine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"rRNA (uridine-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6793127"],"termid":"GO:0008650","terms_by_termid":{"GO:0008650":null}}


id: PBO:0091089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein Ist1","termid":"PBO:0091089"}


id: GO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 proteinase activated receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 4 proteinase activated receptor binding","synonyms":[{"name":"type 4 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031875"}


id: GO:0019380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-phenylpropionate, the anion of phenylpropanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-phenylpropionate metabolic process","termid":"GO:0018962"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"3-phenylpropionate catabolic process","secondary_identifiers":["MetaCyc:HCAMHPDEG-PWY","MetaCyc:P281-PWY"],"synonyms":[{"name":"3-phenylpropionate breakdown","type":"exact"},{"name":"3-phenylpropionate catabolism","type":"exact"},{"name":"3-phenylpropionate degradation","type":"exact"}],"termid":"GO:0019380"}


id: PR:Q9Y7T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec59 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7T6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase sec59 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.10c","synonyms":[{"name":"Spom972h-sec59","type":"exact"}],"termid":"PR:Q9Y7T6"}


id: PATO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000372 absolute distance value (obsolete PATO:0000372)","termid":"PATO:0000372"}


id: PBO:0041604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 1","termid":"PBO:0041604"}


id: PBO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Aar2 (predicted)","termid":"PBO:0002049"}


id: PATO:0000644
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A increased size quality inhering in an organ or tissue by virtue of the bearer's exhibiting increased number of cells.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Hyperplastic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperplastic","secondary_identifiers":["PATO:0000943"],"synonyms":[{"name":"hyperplasia","type":"exact"},{"name":"overdeveloped","type":"related"}],"termid":"PATO:0000644"}


id: PBO:0064793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1L","termid":"PBO:0064793"}


id: FYPO:0007209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:31483748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"decreased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"},{"name":"reduced sister chromatid cohesion along chromosome arms during mitotic interphase","type":"exact"}],"termid":"FYPO:0007209"}


id: SO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An array includes two or more genes, or two or more gene subarrays, contiguously arranged where the individual genes, or subarrays, are either identical in sequence, or essentially so.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array","synonyms":[{"name":"gene array","type":"exact"}],"termid":"SO:0005851"}


id: GO:0030672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a synaptic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicle membrane","termid":"GO:0099501"},{"relation_name":"part_of","term_name":"synaptic vesicle","termid":"GO:0008021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"synaptic vesicle membrane","termid":"GO:0030672"}


id: PBO:0066772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 70","termid":"PBO:0066772"}


id: GO:0033294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ectoine, 1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ectoine binding","termid":"GO:0033294"}


id: PR:P36617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair endonuclease XPF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10150:SF0","PRO:DNx","OMA:SCHPO04346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.01","secondary_identifiers":["UniProtKB:P36617"],"synonyms":[{"name":"Spom972h-ERCC4","type":"exact"}],"termid":"PR:P36617"}


id: GO:0035143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the caudal fin are generated and organized. A caudal fin is an unpaired medial fin mounted at the caudal end of the fish, and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"caudal fin development","termid":"GO:0033336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin morphogenesis","termid":"GO:0035143"}


id: PBO:0088258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER transmembrane protein, DUF423 family protein, human TMEM256 ortholog, implicated in lipid metabolism or membrane organization","termid":"PBO:0088258"}


id: MOD:00527
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["DeltaMass:0","Unimod:159","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex3HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"(Hex)3-HexNAc-HexNAc","type":"exact"},{"name":"Hex(3)HexNAc(2)","type":"related"},{"name":"Hex3HexNAc2","type":"related"}],"termid":"MOD:00527"}


id: GO:1990643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte colony-stimulating factor stimulus.","definition_xrefs":["PMID:9488469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to granulocyte colony-stimulating factor","termid":"GO:1990638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to granulocyte colony-stimulating factor","termid":"GO:1990643"}


id: PR:O14265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10698:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.10","secondary_identifiers":["UniProtKB:O14265"],"synonyms":[{"name":"SPAC7D4.10","type":"related"},{"name":"Spom972h-ATP6V1H","type":"exact"},{"name":"V-ATPase 54 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14265"}


id: GO:0030282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition of hydroxyapatite, a form of calcium phosphate with the formula Ca10(PO4)6(OH)2, in bone tissue.","definition_xrefs":["GOC:mah","PMID:22936354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"},{"relation_name":"part_of","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone mineralization","synonyms":[{"name":"bone calcification","type":"narrow"}],"termid":"GO:0030282"}


id: PBO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme import protein Shu1","termid":"PBO:0018218"}


id: GO:0033845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NADPH + H+ = 2,5-bis-hydroxymethylfuran + NADP+.","definition_xrefs":["GOC:mah","PMID:16652391","PMID:15338422","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase (NADPH) activity","termid":"GO:0033845"}


id: SO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 5' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_5UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR5","type":"exact"},{"name":"incomplete transcript 5UTR variant","type":"exact"}],"termid":"SO:0002077"}


id: PR:Q9P5N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell-type specific agglutination protein C359.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.04c","synonyms":[{"name":"Spom972h-pfl7","type":"exact"}],"termid":"PR:Q9P5N1"}


id: SO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is monocistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_transcript","synonyms":[{"name":"monocistronic transcript","type":"exact"}],"termid":"SO:0000665"}


id: GO:0097139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BID and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BID-BCL-2 complex","termid":"GO:0097139"}


id: GO:0004839
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73239],"is_not":false,"summary":null,"term":"GO:0004839"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: E1 + ubiquitin + ATP--> E1-ubiquitin + AMP + PPi, where the E1-ubiquitin linkage is a thioester bond between the C-terminal glycine of Ub and a sulfhydryl side group of an E1 cysteine residue. This is the first step in a cascade of reactions in which ubiquitin is ultimately added to a protein substrate.","definition_xrefs":["Wikipedia:Ubiquitin-activating_enzyme","GOC:BioGRID"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"ubiquitin activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8865090","EC:6.2.1.45","Reactome:R-HSA-8852132","Reactome:R-HSA-8852134","Reactome:R-HSA-8865098","Reactome:R-HSA-8852133","Reactome:R-HSA-8865050"],"synonyms":[{"name":"E1 ubiquitin-activating enzyme","type":"related"}],"termid":"GO:0004839","terms_by_termid":{"GO:0004839":null}}


id: PR:O94278
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine repressible genes regulatory protein thi5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.30c","synonyms":[{"name":"Spom972h-thi5","type":"exact"},{"name":"transcription factor ntf1 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94278"}


id: PR:Q9P786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase [NAD(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.04","secondary_identifiers":["UniProtKB:Q9P786"],"synonyms":[{"name":"SPBC1711.04","type":"related"},{"name":"Spom972h-MTHFD2","type":"exact"}],"termid":"PR:Q9P786"}


id: PBO:0062701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily E member 2","termid":"PBO:0062701"}


id: GO:0006256
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75230],"is_not":false,"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP, uridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UDP metabolic process","termid":"GO:0046048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"UDP catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"UDP breakdown","type":"exact"},{"name":"UDP catabolism","type":"exact"},{"name":"UDP degradation","type":"exact"}],"termid":"GO:0006256","terms_by_termid":{"GO:0006256":null}}


id: PBO:0059955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 41","termid":"PBO:0059955"}


id: PBO:0004441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP pseudouridylase box H/ACA snoRNP complex protein Gar1","termid":"PBO:0004441"}


id: GO:0042645
data:
  {"annotated_genes":["SJAG_03906","SJAG_04929","SJAG_MIT06","SJAG_00153","SJAG_01262","SJAG_01807","SJAG_03163","SJAG_03068","SJAG_03957","SJAG_00611","SJAG_MIT05","SJAG_06635","SJAG_00564","SJAG_03780","SJAG_MIT07","SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74815,83888,91125,96583,105264,107172],"is_not":false,"summary":null,"term":"GO:0042645"},{"annotations":[98128,98147,107603,113970,94619,101136,113971,84139,113963,103725],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000262"}]},"cv_name":"cellular_component","definition":"The region of a mitochondrion to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00564":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01807":null,"SJAG_02464":null,"SJAG_03068":null,"SJAG_03163":null,"SJAG_03780":null,"SJAG_03906":null,"SJAG_03957":null,"SJAG_04929":null,"SJAG_06635":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial nucleoid","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042645","terms_by_termid":{"GO:0000262":null,"GO:0042645":null}}


id: PBO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1/Prk1 family protein kinase Ppk30","termid":"PBO:0004130"}


id: GO:2000004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric S-shaped body morphogenesis.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"metanephric S-shaped body morphogenesis","termid":"GO:0072284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric S-shaped body morphogenesis","termid":"GO:2000004"}


id: PBO:0055302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2729","termid":"PBO:0055302"}


id: PR:P0CT37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-4 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.13c","synonyms":[{"name":"Spom972h-Tf2-4","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT37"}


id: PBO:0081197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIM2 antisense RNA 1","termid":"PBO:0081197"}


id: PR:O14296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01849","PRO:DNx","PANTHER:PTHR10476:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.14","secondary_identifiers":["UniProtKB:O14296"],"synonyms":[{"name":"Spom972h-CHMP3","type":"exact"}],"termid":"PR:O14296"}


id: PBO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2","termid":"PBO:0003691"}


id: PBO:0083346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene DDR48/YML173W","termid":"PBO:0083346"}


id: PBO:0026926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026926"}


id: PBO:0038968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoethanethiol dioxygenase","termid":"PBO:0038968"}


id: PBO:0085832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; potential Cdc28p substrate; similar to Skg4p; relocalizes from bud neck to cytoplasm upon DNA replication stress; SKG3 has a paralog, CAF120, that arose from the whole genome duplication","termid":"PBO:0085832"}


id: FYPO:0002665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"}


id: PBO:0075827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 2","termid":"PBO:0075827"}


id: PBO:0041878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated TTC17 interacting protein","termid":"PBO:0041878"}


id: FYPO:0004630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"decreased transcript level during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004630"}


id: GO:0015399
data:
  {"annotated_genes":["SJAG_03415","SJAG_01817","SJAG_01129","SJAG_01344","SJAG_MIT13","SJAG_04015","SJAG_00136","SJAG_02023","SJAG_03497","SJAG_02504","SJAG_05629","SJAG_04258","SJAG_01471","SJAG_01447","SJAG_03850","SJAG_02077","SJAG_MIT03","SJAG_01879","SJAG_03785","SJAG_00755","SJAG_07007","SJAG_01597","SJAG_03337","SJAG_02602","SJAG_01435","SJAG_00976","SJAG_03515","SJAG_MIT04","SJAG_01190","SJAG_04152","SJAG_04757","SJAG_MIT20","SJAG_03560","SJAG_04277","SJAG_00212","SJAG_03358","SJAG_05213","SJAG_03866","SJAG_02457","SJAG_01400","SJAG_02782","SJAG_01397","SJAG_01355","SJAG_00516","SJAG_01669","SJAG_01913","SJAG_04955","SJAG_07006","SJAG_03490","SJAG_02646","SJAG_01490","SJAG_04167","SJAG_03406","SJAG_05294","SJAG_03502","SJAG_02399","SJAG_03363","SJAG_01077","SJAG_00601","SJAG_00373","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[103836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[74690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[113160,92413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[107441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[96169,96875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140359"},{"annotations":[112925,91447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"},{"annotations":[78501,74289,70872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[114005,109714,84749,109296,111830,103459,83760,87398,113960,113981,110483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[107947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[78569,71342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[76437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[70871,110140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015662"},{"annotations":[103044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[107445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[76528,70624,72673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[72863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[90841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140358"},{"annotations":[94841,100400,102783,102761,86376,95609,92246,98534,106907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"},{"annotations":[91984,70961,113668,97927,77130,91038,88283,95233,105017,87494,85354,77923,85666,95308,99168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[108485,99738,113119,112668,103145,99334,113984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is powered by a primary energy source. Primary energy sources known to be coupled to transport are chemical such as ATP hydrolysis, redox energy and photon energy.","definition_xrefs":["PMID:31613498","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00373":null,"SJAG_00516":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01129":null,"SJAG_01190":null,"SJAG_01344":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01597":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01879":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02077":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02504":null,"SJAG_02598":null,"SJAG_02602":null,"SJAG_02646":null,"SJAG_02782":null,"SJAG_03337":null,"SJAG_03358":null,"SJAG_03363":null,"SJAG_03406":null,"SJAG_03415":null,"SJAG_03490":null,"SJAG_03497":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04152":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04277":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05213":null,"SJAG_05294":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"primary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["TC:3","EC:7.-.-.-"],"synonyms":[{"name":"primary active transporter","type":"related"}],"termid":"GO:0015399","terms_by_termid":{"GO:0004129":null,"GO:0005388":null,"GO:0008121":null,"GO:0008137":null,"GO:0008553":null,"GO:0008554":null,"GO:0008559":null,"GO:0008900":null,"GO:0015410":null,"GO:0015421":null,"GO:0015450":null,"GO:0015662":null,"GO:0019829":null,"GO:0043682":null,"GO:0044604":null,"GO:0046961":null,"GO:0140358":null,"GO:0140359":null,"GO:0140481":null,"GO:0140581":null,"GO:0140679":null}}


id: GO:0072258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the interstitial fibroblasts of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast differentiation","synonyms":[{"name":"metanephros interstitial cell differentiation","type":"exact"}],"termid":"GO:0072258"}


id: PBO:0003514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sfb3 (predicted)","termid":"PBO:0003514"}


id: PBO:0050260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 38","termid":"PBO:0050260"}


id: PBO:0062412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 39 pseudogene","termid":"PBO:0062412"}


id: PBO:0084890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator of the COB mRNA; interacts with translating ribosomes, acts on the COB mRNA 5'-untranslated leader","termid":"PBO:0084890"}


id: PR:O14260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.03c gene.","definition_xrefs":["UniProtKB:O14260","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0592 membrane protein C7D4.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.03c","synonyms":[{"name":"Spom972h-SPAC7D4.03c","type":"exact"}],"termid":"PR:O14260"}


id: PBO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase beta subunit Fas1","termid":"PBO:0002275"}


id: PR:O74391
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2502 gene.","definition_xrefs":["UniProtKB:O74391","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.04","synonyms":[{"name":"Spom972h-rpl2502","type":"exact"}],"termid":"PR:O74391"}


id: GO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein as part of a process of ubiquitin-dependent protein catabolism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0070647"],"is_obsolete":false,"name":"protein deubiquitination involved in ubiquitin-dependent protein catabolic process","termid":"GO:0071947"}


id: PR:O14053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13889:SF2","OMA:SCHPO04369","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 21 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.07","secondary_identifiers":["UniProtKB:O14053"],"synonyms":[{"name":"Spom972h-WDR36","type":"exact"},{"name":"U3 snoRNA-associated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14053"}


id: GO:0031526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the brush border.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"brush border","termid":"GO:0005903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"brush border membrane","termid":"GO:0031526"}


id: PBO:0063460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor subunit B","termid":"PBO:0063460"}


id: GO:0007118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth at the tip of a bud, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell apical bud growth","synonyms":[{"name":"apical bud growth","type":"broad"}],"termid":"GO:0007118"}


id: GO:1990047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous, nuclear-derived structure that embeds the microtubule spindle apparatus from pole to pole in a microtubule-independent manner during mitosis.","definition_xrefs":["PMID:19273613","PMID:22855526","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spindle matrix","termid":"GO:1990047"}


id: PBO:0061715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2A","termid":"PBO:0061715"}


id: GO:0009938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gibberellic acid mediated signaling activity.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellic acid mediated signaling pathway","termid":"GO:0009937"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"negative regulation of gibberellic acid mediated signalling","type":"exact"},{"name":"down regulation of gibberellic acid mediated signaling","type":"exact"},{"name":"down-regulation of gibberellic acid mediated signaling","type":"exact"},{"name":"downregulation of gibberellic acid mediated signaling","type":"exact"},{"name":"inhibition of gibberellic acid mediated signaling","type":"narrow"}],"termid":"GO:0009938"}


id: PBO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXS family protein","termid":"PBO:0000405"}


id: FYPO:0007309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 8 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0002382"},{"relation_name":"is_a","term_name":"increased histone H4-K8 acetylation during vegetative growth","termid":"FYPO:0005308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4-K8 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K8 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K8 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K8 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K8 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K8 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K8 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007309"}


id: FYPO:0005024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal along the chromosome arms. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PMID:21633354","PomBase:mah","GO:1990891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid arm separation","synonyms":[{"name":"abnormal mitotic chromosome arm separation","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid arm separation during vegetative growth","type":"exact"}],"termid":"FYPO:0005024"}


id: GO:0038067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038067)","synonyms":[{"name":"MAP kinase activity involved in cell wall biogenesis","type":"narrow"},{"name":"MAP kinase activity involved in cell wall integrity","type":"related"},{"name":"MAPK activity involved in cell wall biogenesis","type":"narrow"}],"termid":"GO:0038067"}


id: GO:0014879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an electrical stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to electrical stimulus involved in regulation of muscle adaptation","termid":"GO:0014878"},{"relation_name":"is_a","term_name":"detection of electrical stimulus","termid":"GO:0050981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in regulation of muscle adaptation","termid":"GO:0014879"}


id: PBO:0084176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histidinol-phosphate aminotransferase; catalyzes the seventh step in histidine biosynthesis; responsive to general control of amino acid biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts","termid":"PBO:0084176"}


id: GO:0070347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brown fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"brown fat cell proliferation","termid":"GO:0070342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brown fat cell proliferation","synonyms":[{"name":"regulation of brown adipocyte proliferation","type":"exact"},{"name":"regulation of brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070347"}


id: PBO:0075964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 5","termid":"PBO:0075964"}


id: GO:0042328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"heparan sulfate N-acetylglucosaminyltransferase activity","synonyms":[{"name":"heparan sulphate N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"heparin N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0042328"}


id: GO:0080036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080036"}


id: PBO:0050384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 8","termid":"PBO:0050384"}


id: PBO:0066709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 6","termid":"PBO:0066709"}


id: GO:1903183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of SUMO ligase activity.","definition_xrefs":["GO_REF:0000059","PMID:16731528","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein sumoylation","termid":"GO:0033234"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of SUMO transferase activity","termid":"GO:1903182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of SUMO transferase activity","synonyms":[{"name":"down regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"down regulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"down regulation of SUMO ligase activity","type":"exact"},{"name":"down-regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"down-regulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"down-regulation of SUMO ligase activity","type":"exact"},{"name":"downregulation of SMT3 conjugating enzyme","type":"exact"},{"name":"downregulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"downregulation of SUMO ligase activity","type":"exact"},{"name":"inhibition of SMT3 conjugating enzyme","type":"narrow"},{"name":"inhibition of SUMO conjugating enzyme activity","type":"narrow"},{"name":"inhibition of SUMO ligase activity","type":"narrow"},{"name":"negative regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"negative regulation of SUMO conjugating enzyme activity","type":"exact"}],"termid":"GO:1903183"}


id: GO:0015047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferricytochrome c2 = NADP+ + 2 ferrocytochrome c2.","definition_xrefs":["EC:1.6.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"NADPH-cytochrome-c2 reductase activity","secondary_identifiers":["RHEA:15237","MetaCyc:NADPH--CYTOCHROME-C2-REDUCTASE-RXN"],"synonyms":[{"name":"NADPH:ferricytochrome-c2 oxidoreductase activity","type":"related"},{"name":"cytochrome c2 reductase (reduced nicotinamide adinine dinucleotide phosphate, NADPH)","type":"related"},{"name":"reductase, cytochrome c2 (reduced nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0015047"}


id: PBO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic (sorulation) septin Spn6","termid":"PBO:0018179"}


id: GO:1904389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a rod bipolar cell.","definition_xrefs":["PMID:16914133","GO_REF:0000086","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rod bipolar cell differentiation","termid":"GO:1904389"}


id: PBO:0091127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi kish family protein Ksh1","termid":"PBO:0091127"}


id: GO:0030847
data:
  {"annotated_genes":["SJAG_04006","SJAG_03179","SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92610,97438,102647],"is_not":false,"summary":null,"term":"GO:0030847"}]},"cv_name":"biological_process","definition":"The process in which transcription of nonpolyadenylated RNA polymerase II transcripts is terminated; coupled to the maturation of the RNA 3'-end.","definition_xrefs":["PMID:27371117","GOC:txnOH","PMID:12944462","PMID:18679429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03179":null,"SJAG_04006":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"termination of RNA polymerase II transcription, exosome-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"termination of RNA polymerase II transcription, poly(A)-independent","type":"exact"},{"name":"transcription termination from Pol II promoter, RNA polymerase(A)-independent","type":"exact"},{"name":"transcription termination from Pol II promoter, poly(A)-independent","type":"exact"}],"termid":"GO:0030847","terms_by_termid":{"GO:0030847":null}}


id: PBO:0066119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 12","termid":"PBO:0066119"}


id: GO:0030802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030802)","synonyms":[{"name":"regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"regulation of cyclic nucleotide formation","type":"exact"},{"name":"regulation of cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0030802"}


id: GO:0051497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"negatively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of stress fiber assembly","synonyms":[{"name":"down regulation of stress fiber formation","type":"related"},{"name":"down-regulation of stress fiber formation","type":"exact"},{"name":"downregulation of stress fiber formation","type":"related"},{"name":"inhibition of stress fiber formation","type":"narrow"},{"name":"negative regulation of stress fibre biosynthesis","type":"related"},{"name":"negative regulation of stress fibre formation","type":"related"}],"termid":"GO:0051497"}


id: PBO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 1","termid":"PBO:0043801"}


id: PBO:0089991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Mam33","termid":"PBO:0089991"}


id: PBO:0050642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 7, pseudogene","termid":"PBO:0050642"}


id: PBO:0090658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP II complex subunit Trs120","termid":"PBO:0090658"}


id: PR:O94409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.02","synonyms":[{"name":"Spom972h-wtf23","type":"exact"}],"termid":"PR:O94409"}


id: PBO:0062917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y1","termid":"PBO:0062917"}


id: GO:0061101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a neuroendocrine cell. A neuroendocrine cell is a cell that receives input form a neuron which controls the secretion of an endocrine substance.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroendocrine cell differentiation","termid":"GO:0061101"}


id: PR:O59804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 10 kDa chaperonin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"10 kDa heat shock protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.06c","secondary_identifiers":["UniProtKB:O59804"],"synonyms":[{"name":"10 kDa chaperonin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HSP10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-groS","type":"exact"}],"termid":"PR:O59804"}


id: GO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ascorbate from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-198870"],"synonyms":[{"name":"L-ascorbate transporter activity","type":"exact"},{"name":"vitamin C transporter activity","type":"exact"}],"termid":"GO:0015229"}


id: PBO:0062127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 7 pseudogene","termid":"PBO:0062127"}


id: FYPO:0009102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain less cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"interphase microtubules present in decreased numbers","synonyms":[{"name":"decreased number of interphase microtubules","type":"exact"},{"name":"fewer microtubules present during mitotic interphase","type":"exact"}],"termid":"FYPO:0009102"}


id: PBO:0057201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 373","termid":"PBO:0057201"}


id: GO:0090616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["GOC:tb","PMID:25181358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA 3'-end processing","termid":"GO:0090616"}


id: PBO:0072956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase pseudogene 1","termid":"PBO:0072956"}


id: PBO:0073836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A11 antisense RNA 1","termid":"PBO:0073836"}


id: GO:0072368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid transport by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072368)","synonyms":[{"name":"regulation of lipid transport by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072368"}


id: PBO:0087400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift","termid":"PBO:0087400"}


id: PBO:0052383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 24","termid":"PBO:0052383"}


id: PBO:0083120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dock family protein (Dedicator Of CytoKinesis), homolog of human DOCK1; upstream component for regulation through the small GTPase Rho5p; may form a complex with Lmo1p that acts as a GEF for Rho5p; interacts with Ino4p; cytoplasmic protein that relocates to mitochondria under oxidative stress; implicated in mitophagy; not an essential protein; DOCK proteins act as guanine nucleotide exchange factors","termid":"PBO:0083120"}


id: GO:1901296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway involved in heart development","termid":"GO:0003308"},{"relation_name":"is_a","term_name":"negative regulation of canonical Wnt signaling pathway","termid":"GO:0090090"},{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","termid":"GO:1901295"},{"relation_name":"negatively_regulates","term_name":"canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","termid":"GO:0061317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901296"}


id: PBO:0046557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 48 member 1, envelope","termid":"PBO:0046557"}


id: GO:0015095
data:
  {"annotated_genes":["SJAG_03516","SJAG_00211","SJAG_01639","SJAG_02578","SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56749,70183,73724,74695,76193],"is_not":false,"summary":null,"term":"GO:0015095"}]},"cv_name":"molecular_function","definition":"Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"magnesium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5336453","Reactome:R-HSA-5339538","Reactome:R-HSA-5336466","RHEA:29827","Reactome:R-HSA-442661","Reactome:R-HSA-5336454","Reactome:R-HSA-5339528"],"termid":"GO:0015095","terms_by_termid":{"GO:0015095":null}}


id: PBO:0076238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 1","termid":"PBO:0076238"}


id: GO:1905687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GOC:bc","GO_REF:0000059","GOC:TermGenie","PMID:23091060","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid kinase activity","termid":"GO:0043550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of diacylglycerol kinase activity","synonyms":[{"name":"regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"regulation of DG kinase activity","type":"exact"},{"name":"regulation of DGK activity","type":"exact"},{"name":"regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"regulation of diglyceride kinase activity","type":"exact"},{"name":"regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905687"}


id: PBO:0110316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF for Sar1, WD repeat protein Spo14","termid":"PBO:0110316"}


id: MOD:01566
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01566"}


id: SO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014).","definition_xrefs":["PMID:16827941:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv4_motif","synonyms":[{"name":"DMv4","type":"exact"},{"name":"DMv4 motif","type":"exact"},{"name":"YGGTCACATR","type":"narrow"},{"name":"directional motif v4","type":"exact"},{"name":"motif 1 element","type":"exact"},{"name":"promoter motif 1","type":"exact"}],"termid":"SO:0001157"}


id: PBO:0062107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 5","termid":"PBO:0062107"}


id: GO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.","definition_xrefs":["MetaCyc:R15-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"aspartate-2-keto-4-methylthiobutyrate transaminase activity","termid":"GO:0046571"}


id: PBO:0029331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation","termid":"PBO:0029331"}


id: PBO:0085458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potential noncatalytic subunit for phospholipid translocase Dnf3p; YNR048W has a paralog, CDC50, that arose from the whole genome duplication","termid":"PBO:0085458"}


id: GO:0055080
data:
  {"annotated_genes":["SJAG_02716","SJAG_03866","SJAG_02457","SJAG_04677","SJAG_04743","SJAG_02399","SJAG_01004","SJAG_00328","SJAG_00301","SJAG_01353","SJAG_03879","SJAG_01397","SJAG_01007","SJAG_04975","SJAG_01669","SJAG_02532","SJAG_00136","SJAG_02080","SJAG_00668","SJAG_03862","SJAG_00222","SJAG_04698","SJAG_02578","SJAG_01541","SJAG_01078","SJAG_04403","SJAG_04675","SJAG_04760","SJAG_04028","SJAG_04955","SJAG_05294","SJAG_01817","SJAG_00792","SJAG_04867","SJAG_01803","SJAG_01400","SJAG_03793","SJAG_00963","SJAG_02847","SJAG_04111","SJAG_02019","SJAG_02474","SJAG_03528","SJAG_04757","SJAG_04031","SJAG_02470","SJAG_01129","SJAG_04616","SJAG_02735","SJAG_04032","SJAG_03631","SJAG_01435","SJAG_04096","SJAG_03850","SJAG_01445","SJAG_02883","SJAG_00802","SJAG_04167","SJAG_02834","SJAG_01694","SJAG_00516","SJAG_00822","SJAG_02023","SJAG_04607","SJAG_00212","SJAG_01913","SJAG_00532","SJAG_04584","SJAG_01990","SJAG_00299","SJAG_04260","SJAG_03516","SJAG_00923","SJAG_04258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89508,89516,99040],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[70517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[71348,76942,70250,74292,70875,78504,78570,93448,108444,113520,73139,72055,72869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[103039,76740,74199,95445,88547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[99510,73552,74200,87740,108958,70973,74076,89473,76829,76741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[70185,73726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[70257,95516,74710,72997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[59313,88848,97240,108873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030003"},{"annotations":[70452,76979,90818,72006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[72999],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[89186,76966,89185,109405,73851,73523,98822,95446,99563,72353,90114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[87882,87885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[111977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[107884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[95794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[70626,76530,71309,72675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[105907,105906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[78516,77129,95306,83603,99166,96923,73322,91036,72522,72182,70849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of monoatomic cations within an organism or cell. 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id: PBO:0075001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-12","termid":"PBO:0075001"}


id: GO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.","definition_xrefs":["GOC:mah","GOC:dph","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0005515","GO:0005488","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"hormone activity","synonyms":[{"name":"cAMP generating peptide activity","type":"narrow"},{"name":"glycopeptide hormone","type":"narrow"},{"name":"lipopeptide hormone","type":"narrow"},{"name":"peptide hormone","type":"narrow"}],"termid":"GO:0005179"}


id: FYPO:0009026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing methionine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on methionine nitrogen source","synonyms":[{"name":"increased growth on methionine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on methionine nitrogen source","type":"exact"}],"termid":"FYPO:0009026"}


id: PBO:0045731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL associated factor 1","termid":"PBO:0045731"}


id: GO:0045869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of single stranded viral RNA replication via double stranded DNA intermediate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral genome replication","termid":"GO:0045071"},{"relation_name":"is_a","term_name":"regulation of single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0045091"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0039692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single stranded viral RNA replication via double stranded DNA intermediate","synonyms":[{"name":"down regulation of retroviral genome replication","type":"exact"},{"name":"down-regulation of retroviral genome replication","type":"exact"},{"name":"downregulation of retroviral genome replication","type":"exact"},{"name":"inhibition of retroviral genome replication","type":"narrow"},{"name":"negative regulation of retroviral genome replication","type":"exact"},{"name":"regulation of retroviral genome replication","type":"related"}],"termid":"GO:0045869"}


id: SO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is similar or identical across more than one species.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved","termid":"SO:0000856"}


id: GO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + tomatidine = UDP + O-glucosyl-tomatidine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 3-beta-glucosyltransferase activity","termid":"GO:0016906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tomatidine UDP-glucosyltransferase activity","termid":"GO:0051509"}


id: PBO:0045803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroid differentiation regulatory factor 1","termid":"PBO:0045803"}


id: GO:0004050
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109043],"is_not":false,"summary":null,"term":"GO:0004050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleoside 5'-triphosphate + 2 H2O = a ribonucleoside 5'-phosphate + 2 phosphate. This reaction consists of two distinct successive phosphate-releasing steps, with NDPs as intermediates. Apyrases are active against both di- and triphosphate nucleotides (NDPs and NTPs) and hydrolyze NTPs to nucleotide monophosphates (NMPs).","definition_xrefs":["EC:3.6.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"apyrase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:36795","MetaCyc:APYRASE-RXN"],"termid":"GO:0004050","terms_by_termid":{"GO:0004050":null}}


id: GO:0033443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"AAA codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033443"}


id: GO:0070782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipid scrambling process that results in the appearance of phosphatidylserine on the outer leaflet of the plasma membrane of an apoptotic cell, which acts as an 'eat-me' signal for engulfing cells. Phosphatidylserine is exposed on the apoptotic cell surface by a phospholipid scramblase activity.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","GOC:rk","PMID:11536005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"},{"relation_name":"part_of","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"externalization of phosphatidylserine","type":"exact"}],"termid":"GO:0070782"}


id: PBO:0074186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 7","termid":"PBO:0074186"}


id: _global:member_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"member_of","termid":"_global:member_of"}


id: PBO:0062707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily G member 1","termid":"PBO:0062707"}


id: PBO:0052673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 41","termid":"PBO:0052673"}


id: PBO:0051653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 8","termid":"PBO:0051653"}


id: GO:0015760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucose-6-phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose phosphate transport","termid":"GO:0015712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glucose-6-phosphate transport","termid":"GO:0015760"}


id: GO:0099071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule bundle that undergoes changes in length, and in which microtubule sliding takes place.","definition_xrefs":["PMID:26124291","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dynamic microtubule bundle","termid":"GO:0099071"}


id: PBO:0038948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase 1 pseudogene 3","termid":"PBO:0038948"}


id: PBO:0075539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E19, pseudogene","termid":"PBO:0075539"}


id: PBO:0005753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S2 (predicted)","termid":"PBO:0005753"}


id: GO:0034579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + n-hexane = (1-methylpentyl)succinate.","definition_xrefs":["UM-BBD_reactionID:r0920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(1-methylpentyl)succinate synthase activity","termid":"GO:0034579"}


id: PBO:0090736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk1","termid":"PBO:0090736"}


id: PBO:0086992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for splicing of the group I intron bI5 of the COB pre-mRNA; nuclear-encoded mitochondrial protein that binds to the RNA to promote splicing; also involved in but not essential for splicing of the COB bI2 intron and the intron in the 21S rRNA gene","termid":"PBO:0086992"}


id: PBO:0024476
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of A Kinase","termid":"PBO:0024476"}


id: GO:0103044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + a [protein] C-terminal L-glutamate = ADP + hydrogenphosphate + H+ + a [protein] with C-terminal alpha-L-glutamate-alpha-L-glutamate.","definition_xrefs":["GOC:pz","EC:6.3.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal S6-glutamic acid ligase activity","termid":"GO:0018169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874","GO:0140096"],"is_obsolete":false,"name":"ribosomal protein S6 glutamate-glutamate ligase activity","secondary_identifiers":["MetaCyc:RXN0-6726"],"termid":"GO:0103044"}


id: PBO:0036448
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Can't Stop Synthesising cell wall","termid":"PBO:0036448"}


id: GO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methyl esterification of peptidyl-glutamic acid or peptidyl-glutamine to form the derivative glutamic acid 5-methyl ester.","definition_xrefs":["RESID:AA0072"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamic acid 5-methyl ester biosynthetic process from peptidyl-glutamic acid or peptidyl-glutamine (obsolete GO:0018390)","synonyms":[{"name":"peptidyl-L-glutamic acid 5-methyl ester anabolism from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester formation from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester synthesis from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"}],"termid":"GO:0018390"}


id: GO:0018823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexa-1,5-diene-1-carbonyl-CoA + H2O = 6-hydroxycyclohex-1-enecarbonyl-CoA.","definition_xrefs":["RHEA:21856","EC:4.2.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"cyclohexa-1,5-dienecarbonyl-CoA hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0203","MetaCyc:4.2.1.100-RXN","KEGG_REACTION:R05597"],"synonyms":[{"name":"6-hydroxycyclohex-1-enecarbonyl-CoA (cyclohexa-1,5-dienecarbonyl-CoA-forming)","type":"related"},{"name":"cyclohex-1,5-diene-1-carbonyl-CoA hydratase activity","type":"exact"},{"name":"cyclohexa-1,5-diene-1-carbonyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-diene-1-carboxyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-dienecarbonyl-CoA hydro-lyase activity","type":"related"},{"name":"dienoyl-CoA hydratase activity","type":"related"}],"termid":"GO:0018823"}


id: PBO:0086217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases; involved in tRNA delivery, stimulating catalysis, and ensuring localization; also binds quadruplex nucleic acids; protein abundance increases in response to DNA replication stress; methionyl-tRNA synthetase is Mes1p; glutamyl-tRNA synthetase is Gus1p","termid":"PBO:0086217"}


id: GO:0006907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in the uptake of liquid material by cells from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, called pinosomes, formed by invagination of the plasma membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pinocytosis","secondary_identifiers":["GO:1902536","Wikipedia:Pinocytosis","GO:0006908"],"synonyms":[{"name":"clathrin-independent pinocytosis","type":"broad"},{"name":"fluid-phase endocytosis","type":"exact"},{"name":"single-organism pinocytosis","type":"related"}],"termid":"GO:0006907"}


id: PBO:0082051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase of the conserved RecQ family; involved in Pso2p-mediated interstrand crosslink repair; acts with Rad4p in nucleotide-excision repair; binds telomeres, modulates telomerase activity with Pif1p and inhibits telomere addition to dsDNA breaks; role in telomerase-independent telomere maintenance; lacks ssDNA annealing and strand exchange activities; human RecQL4, a structural and functional homolog, is involved in Rothmund-Thomson, Baller-Gerold and RAPADILINO syndromes","termid":"PBO:0082051"}


id: GO:0032968
data:
  {"annotated_genes":["SJAG_00150","SJAG_01149","SJAG_03967","SJAG_03118","SJAG_03061","SJAG_02551","SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70755,71341,76761,101247,104195,110335,112000],"is_not":false,"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription, elongation","termid":"GO:0032786"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"positively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090040"],"synonyms":[{"name":"positive regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0032968","terms_by_termid":{"GO:0032968":null}}


id: PBO:0040171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 2","termid":"PBO:0040171"}


id: PR:P08965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.03c","secondary_identifiers":["PR:000027568","UniProtKB:P08965"],"synonyms":[{"name":"SPAC27D7.03C","type":"related"},{"name":"Spom972h-mei2","type":"exact"}],"termid":"PR:P08965"}


id: PBO:0076379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1/MAP3K7 binding protein 3 pseudogene 1","termid":"PBO:0076379"}


id: PR:O13961
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut11 gene.","definition_xrefs":["UniProtKB:O13961","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope protein ndc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.03","synonyms":[{"name":"Spom972h-cut11","type":"exact"},{"name":"cell untimely torn protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13961"}


id: PBO:0054587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1990","termid":"PBO:0054587"}


id: PBO:0077352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 92","termid":"PBO:0077352"}


id: GO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by galactose","termid":"GO:0000411"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by galactose","termid":"GO:0000431"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by galactose","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by galactose","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by galactose","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by galactose","type":"exact"}],"termid":"GO:0000435"}


id: PBO:0034319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-represses_expression_of","termid":"PBO:0034319"}


id: GO:0046414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of organomercury compounds, any organic compound containing a mercury atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organomercury metabolic process","termid":"GO:0018941"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organomercury biosynthetic process","synonyms":[{"name":"organomercury anabolism","type":"exact"},{"name":"organomercury biosynthesis","type":"exact"},{"name":"organomercury formation","type":"exact"},{"name":"organomercury synthesis","type":"exact"}],"termid":"GO:0046414"}


id: PBO:0067207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 272, pseudogene","termid":"PBO:0067207"}


id: PBO:0049816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 8","termid":"PBO:0049816"}


id: GO:0034424
data:
  {"annotated_genes":["SJAG_07012","SJAG_03511"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74583,94188],"is_not":false,"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"A membrane-associated protein complex that is required for a late stage of endosomal transport. In budding yeast, this complex consists of Vps55p and Vps68p proteins.","definition_xrefs":["PMID:18216282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03511":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Vps55/Vps68 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034424","terms_by_termid":{"GO:0034424":null}}


id: GO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which decreases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"negative regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003108"}


id: PBO:0077982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 4-1","termid":"PBO:0077982"}


id: PBO:0057092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 188","termid":"PBO:0057092"}


id: PBO:0040004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL14EP divergent transcript","termid":"PBO:0040004"}


id: PBO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor eIF5A (predicted)","termid":"PBO:0002388"}


id: PBO:0046318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1","termid":"PBO:0046318"}


id: PBO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo kinase Plo1","termid":"PBO:0001383"}


id: SO:1000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a change in primary translation product of a transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000088 sequence_variant_affecting_translational_product (obsolete SO:1000088)","synonyms":[{"name":"mutation affecting translational product","type":"related"},{"name":"mutation causing partially characterised change of translational product","type":"related"},{"name":"mutation causing uncharacterised change of translational product","type":"related"},{"name":"sequence variant affecting translational product","type":"exact"},{"name":"sequence variant causing partially characterised change of translational product","type":"exact"},{"name":"sequence variant causing uncharacterised change of translational product","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_change_of_translational_product","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_change_of_translational_product","type":"exact"}],"termid":"SO:1000088"}


id: PBO:0081184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 1","termid":"PBO:0081184"}


id: PR:P30655
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.13c","secondary_identifiers":["UniProtKB:P30655"],"synonyms":[{"name":"SPAC4A8.13c","type":"related"},{"name":"Spom972h-PSMB5","type":"exact"},{"name":"macropain subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"multicatalytic endopeptidase complex subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"proteasome component pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30655"}


id: PBO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho3","termid":"PBO:0000740"}


id: PBO:0029249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_filaments_present_in_increased_numbers","termid":"PBO:0029249"}


id: GO:0035906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the descending aorta over time, from its initial formation to the mature structure. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["MA:0002571","UBERON:0001514","GOC:bf","GOC:dgh","Wikipedia:Descending_aorta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending aorta development","termid":"GO:0035906"}


id: GO:0044299
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The axon of a dorsal root ganglion cell that are responsive to pain and temperature. C-fibers are small in diameter (0.2-1.5 um) and unmyelinated.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"C-fiber","synonyms":[{"name":"C-fibre","type":"exact"}],"termid":"GO:0044299"}


id: PATO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Recurrent and often more or less cyclic alteration.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant","termid":"PATO:0001227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluctuating","termid":"PATO:0002374"}


id: PBO:0060385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYT1L antisense RNA 1","termid":"PBO:0060385"}


id: GO:2000920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucuronoarabinoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucuronoxylan catabolic process","termid":"GO:2000917"},{"relation_name":"is_a","term_name":"regulation of glucuronoarabinoxylan catabolic process","termid":"GO:2000918"},{"relation_name":"is_a","term_name":"positive regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000923"},{"relation_name":"positively_regulates","term_name":"glucuronoarabinoxylan catabolic process","termid":"GO:2000887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucuronoarabinoxylan catabolic process","synonyms":[{"name":"positive regulation of glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000920"}


id: GO:0150195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances (e.g. macromolecules, small molecules, ions) through the blood-cerebrospinal fluid barrier.","definition_xrefs":["GOC:aruk","PMID:21349151","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"transport across blood-cerebrospinal fluid barrier","synonyms":[{"name":"transport across BCSFB","type":"exact"},{"name":"transport across blood-CSF barrier","type":"exact"},{"name":"transport across blood/CSF barrier","type":"exact"},{"name":"transport across blood/cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:0150195"}


id: GO:0032464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein oligomerization","termid":"GO:0032461"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"positively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of protein homooligomerization","synonyms":[{"name":"activation of protein homooligomerization","type":"narrow"},{"name":"induction of protein homooligomerization","type":"related"},{"name":"stimulation of protein homooligomerization","type":"narrow"},{"name":"up regulation of protein homooligomerization","type":"exact"},{"name":"up-regulation of protein homooligomerization","type":"exact"},{"name":"upregulation of protein homooligomerization","type":"exact"}],"termid":"GO:0032464"}


id: GO:0071681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an indole-3-methanol stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to indole-3-methanol","termid":"GO:0071680"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to indole-3-methanol","synonyms":[{"name":"cellular response to indole-3-carbinol","type":"exact"}],"termid":"GO:0071681"}


id: PBO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin family nuclear export receptor Crm1","termid":"PBO:0001740"}


id: PBO:0074660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 49","termid":"PBO:0074660"}


id: GO:0097040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phthiocerol, a lipid-based 1,3-glycol consisting of (3S,4R)-3-methoxy-4-methylnonacosane having (9R)- and (11S)-hydroxy substituents.","definition_xrefs":["GOC:ecd","GOC:dph","PMID:9201977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"glycol biosynthetic process","termid":"GO:0042845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phthiocerol biosynthetic process","synonyms":[{"name":"phthiocerol anabolism","type":"exact"},{"name":"phthiocerol biosynthesis","type":"exact"},{"name":"phthiocerol formation","type":"exact"},{"name":"phthiocerol synthesis","type":"exact"}],"termid":"GO:0097040"}


id: GO:0071495
data:
  {"annotated_genes":["SJAG_04140","SJAG_01805","SJAG_04332","SJAG_04183","SJAG_00082","SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89220,106312,85504,111693,97645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[99411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[97654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[97655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[89945,97656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to endogenous stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071495","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0141105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts a toll-like receptor signaling pathway in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17299722","PMID:18327267","PMID:15944308"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host toll-like receptor signal transduction (obsolete GO:0141105)","synonyms":[{"name":"symbiont-mediated disruption of host toll-like receptor signaling pathway","type":"exact"},{"name":"symbiont-mediated suppression of host toll-like receptor signal transduction","type":"related"},{"name":"symbiont-mediated suppression of host toll-like receptor signaling pathway","type":"exact"}],"termid":"GO:0141105"}


id: GO:1902295
data:
  {"annotated_genes":["SJAG_00399","SJAG_03722","SJAG_02172","SJAG_04994","SJAG_01698","SJAG_02627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111284,74374,112323,70305,110547,61609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902981"}]},"cv_name":"biological_process","definition":"Any DNA replication, synthesis of RNA primer that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication, synthesis of RNA primer","termid":"GO:0006269"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00399":null,"SJAG_01698":null,"SJAG_02172":null,"SJAG_02627":null,"SJAG_03722":null,"SJAG_04994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"synthesis of RNA primer involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"DNA replication, synthesis of RNA primer involved in cell cycle DNA replication","type":"exact"},{"name":"replication priming involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902295","terms_by_termid":{"GO:1902981":null}}


id: GO:0048792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of a neurotransmitter into the synaptic cleft, where the release step is independent of the presence of calcium ions (Ca2+). The neurotransmitter is contained within a membrane-bounded vesicle, and is released by fusion of the vesicle with the presynaptic plasma membrane of a nerve cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"spontaneous exocytosis of neurotransmitter","synonyms":[{"name":"spontaneous synaptic vesicle exocytosis","type":"exact"}],"termid":"GO:0048792"}


id: PBO:0082498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of a tRNA methyltransferase complex; Trm8p and Trm82p comprise an enzyme that catalyzes a methyl-transfer from S-adenosyl-l-methionine to the N(7) atom of guanine at position 46 in tRNA; Trm8 lacks catalytic activity if not bound to Trm82p","termid":"PBO:0082498"}


id: PBO:0040459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase cation transporting 13A2","termid":"PBO:0040459"}


id: PATO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal to","termid":"PATO:0001916"}


id: GO:0102094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a demethylmenaquinol = S-adenosyl-L-homocysteine + H+ + a menaquinol.","definition_xrefs":["RHEA:26466","GOC:pz","PMID:1444716","PMID:9045837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity","secondary_identifiers":["EC:2.1.1.163","MetaCyc:RXN-11046"],"termid":"GO:0102094"}


id: PBO:0039344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALX homeobox 4","termid":"PBO:0039344"}


id: PBO:0085649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in methylation of tRNA, rRNA, and translation factors; also involved in ribosome biogenesis; subunit of tRNA methyltransferase (MTase) complexes in combination with Trm9p and Trm11p; N7-methylates G1575 of 18S rRNA as complex with Bud23p; subunit of complex with Mtq2p that methylates Sup45p (eRF1) in the ternary complex eRF1-eRF3-GTP; relative distribution to the nucleus increases upon DNA replication stress; functional homolog of human TRMT112","termid":"PBO:0085649"}


id: GO:0072021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an ascending thin limb over time, from its formation to the mature structure. The ascending thin limb is a segment of a nephron tubule lying in the inner medulla that is permeable to ions but not to water and has a simple epithelium; active transepithelial solute transport is absent.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending thin limb development","termid":"GO:0072021"}


id: PBO:0056712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 4","termid":"PBO:0056712"}


id: PBO:0038783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacylase 1","termid":"PBO:0038783"}


id: GO:0048569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Development, taking place during the post-embryonic phase of an animal tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete post-embryonic animal organ development (obsolete GO:0048569)","synonyms":[{"name":"post-embryonic animal organogenesis","type":"exact"}],"termid":"GO:0048569"}


id: GO:0019320
data:
  {"annotated_genes":["SJAG_02369","SJAG_00605","SJAG_01310","SJAG_04334","SJAG_06621","SJAG_04495","SJAG_03828","SJAG_02135","SJAG_02107","SJAG_03660","SJAG_00839","SJAG_03373","SJAG_01209","SJAG_00461","SJAG_03903","SJAG_02009","SJAG_00027","SJAG_04192","SJAG_02945","SJAG_06622","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90397,89924,93603,98895,104545,104549,100663,111381,98633,104548,104550,104546,104547,100664,93336,101026,100665,76589,101025,104551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[104060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01209":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"hexose catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"hexose breakdown","type":"exact"},{"name":"hexose catabolism","type":"exact"},{"name":"hexose degradation","type":"exact"}],"termid":"GO:0019320","terms_by_termid":{"GO:0019388":null,"GO:0061621":null}}


id: PBO:0044466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily Z member 1","termid":"PBO:0044466"}


id: PBO:0053066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LATS2 antisense RNA 1","termid":"PBO:0053066"}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0098754","GO:0055086"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: GO:0097575
data:
  {"annotated_genes":["SJAG_00030","SJAG_03011","SJAG_00028","SJAG_02392","SJAG_04947","SJAG_04509","SJAG_04522","SJAG_00596","SJAG_01925"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83456,91219,99881,102796,104574,109224,111204],"is_not":false,"summary":null,"term":"GO:0097575"},{"annotations":[99772,95375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane of the lateral portion of the cell.","definition_xrefs":["GOC:mah","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00596":null,"SJAG_01925":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"lateral cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097575","terms_by_termid":{"GO:0097575":null,"GO:1990463":null}}


id: GO:1901509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial tube morphogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial tube morphogenesis","termid":"GO:1901509"}


id: PBO:0035788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_mitotic_spindle_assembly_checkpoint_signaling","termid":"PBO:0035788"}


id: PBO:0028168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028168"}


id: GO:1901285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydromethanopterin metabolic process","termid":"GO:1901283"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin biosynthetic process","termid":"GO:2001118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0042559"],"is_obsolete":false,"name":"5,6,7,8-tetrahydromethanopterin biosynthetic process","synonyms":[{"name":"5,6,7,8-tetrahydromethanopterin anabolism","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin biosynthesis","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin formation","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin synthesis","type":"exact"}],"termid":"GO:1901285"}


id: PBO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 39","termid":"PBO:0052671"}


id: GO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that converts synaptic vesicles to a state of competence for calcium triggered fusion with the active zone membrane by bringing the two membranes into very close proximity. Priming typically (but not always) occurs after docking (Jahn and Fasshauer, 2012). Primed vesicles are also capable of spontaneously fusing with the active zone membrane.","definition_xrefs":["GOC:mah","PMID:15217342","PMID:23060190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0065003","GO:0016192","GO:0023052","GO:0006810","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle priming","termid":"GO:0016082"}


id: GO:0031207
data:
  {"annotated_genes":["SJAG_02354","SJAG_02588","SJAG_00175","SJAG_03955"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69902,72642,86075,91116],"is_not":false,"summary":null,"term":"GO:0031207"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the posttranslational targeting of proteins to the ER. In yeast, it is a tetrameric complex consisting of Sec62p, Sec63p, Sec71p and Sec72p.","definition_xrefs":["PMID:12518317","PMID:14617809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum Sec complex","termid":"GO:0031205"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0032991","GO:0005575","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"Sec62/Sec63 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER protein translocation subcomplex","type":"exact"},{"name":"Sec62/63 complex","type":"exact"}],"termid":"GO:0031207","terms_by_termid":{"GO:0031207":null}}


id: SO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small catalytic RNA motif that catalyzes self-cleavage reaction. Its name comes from its secondary structure which resembles a carpenter's hammer. The hammerhead ribozyme is involved in the replication of some viroid and some satellite RNAs.","definition_xrefs":["PMID:2436805"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"ribozymic","termid":"SO:0001186"},{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hammerhead_ribozyme","secondary_identifiers":["http://en.wikipedia.org/wiki/Hammerhead_ribozyme"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:hammerhead_ribozyme","type":"exact"},{"name":"hammerhead ribozyme","type":"exact"}],"termid":"SO:0000380"}


id: PBO:0012028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40 (predicted)","termid":"PBO:0012028"}


id: PBO:0077442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176B","termid":"PBO:0077442"}


id: PBO:0027230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_diglyceride_level","termid":"PBO:0027230"}


id: PBO:0066495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 6","termid":"PBO:0066495"}


id: GO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD80, a CD marker that occurs on antigen presenting cells such as activated B cells and monocytes that provides a co-stimulatory signal necessary for T cell activation and survival.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD80 biosynthetic process","synonyms":[{"name":"CD80 anabolism","type":"exact"},{"name":"CD80 biosynthesis","type":"exact"},{"name":"CD80 formation","type":"exact"},{"name":"CD80 synthesis","type":"exact"}],"termid":"GO:0035780"}


id: PBO:0109041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD reductase Coq12","termid":"PBO:0109041"}


id: PBO:0089064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase","termid":"PBO:0089064"}


id: PBO:0089831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase","termid":"PBO:0089831"}


id: GO:1904436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transferrin receptor binding.","definition_xrefs":["GOC:BHF","GOC:kom","GO_REF:0000059","GOC:TermGenie","PMID:18353247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor binding","termid":"GO:1900121"},{"relation_name":"is_a","term_name":"regulation of transferrin receptor binding","termid":"GO:1904435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transferrin receptor binding","synonyms":[{"name":"down regulation of transferrin receptor binding","type":"exact"},{"name":"down-regulation of transferrin receptor binding","type":"exact"},{"name":"downregulation of transferrin receptor binding","type":"exact"},{"name":"inhibition of transferrin receptor binding","type":"narrow"}],"termid":"GO:1904436"}


id: PR:Q9P7I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane emp24 domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04512","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal protein P24B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.17","secondary_identifiers":["UniProtKB:Q9P7I9"],"synonyms":[{"name":"Spom972h-TMED2","type":"exact"}],"termid":"PR:Q9P7I9"}


id: GO:1903054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["PMID:22357537","GOC:TermGenie","GOC:BHF","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix organization","synonyms":[{"name":"down regulation of extracellular matrix organisation","type":"exact"},{"name":"down regulation of extracellular matrix organization","type":"exact"},{"name":"down regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"down-regulation of extracellular matrix organisation","type":"exact"},{"name":"down-regulation of extracellular matrix organization","type":"exact"},{"name":"down-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"downregulation of extracellular matrix organisation","type":"exact"},{"name":"downregulation of extracellular matrix organization","type":"exact"},{"name":"downregulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"inhibition of extracellular matrix organisation","type":"narrow"},{"name":"inhibition of extracellular matrix organization","type":"narrow"},{"name":"inhibition of extracellular matrix organization and biogenesis","type":"related"},{"name":"negative regulation of extracellular matrix organisation","type":"exact"},{"name":"negative regulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903054"}


id: FYPO:0005830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein transport along microtubule during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005830"}


id: PBO:0034216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-endoparasite_of","termid":"PBO:0034216"}


id: GO:0102416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-3-gentiotrioside + UDP-alpha-D-glucose = quercetin-3-gentiotetraside + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"quercetin gentiotrioside 1,6-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13799"],"termid":"GO:0102416"}


id: PBO:0048106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far upstream element binding protein 1","termid":"PBO:0048106"}


id: PBO:0109356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and putative heme transporter 2","termid":"PBO:0109356"}


id: PATO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the base of an organism relative to another entity.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/basal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal to","termid":"PATO:0002349"}


id: FYPO:0001545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing L-canavanine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on L-canavanine","synonyms":[{"name":"normal cell population growth in presence of L-canavanine","type":"exact"},{"name":"normal cell population growth on L-canavanine","type":"exact"},{"name":"normal cell population growth on canavanine","type":"broad"},{"name":"normal cellular response to L-canavanine","type":"related"},{"name":"normal vegetative cell population growth on L-canavanine","type":"exact"}],"termid":"FYPO:0001545"}


id: GO:1905006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","PMID:18718461","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"},{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:1905005"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","synonyms":[{"name":"down regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"down-regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"downregulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"inhibition of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"narrow"}],"termid":"GO:1905006"}


id: PBO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 9, pseudogene","termid":"PBO:0080130"}


id: PBO:0042530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 pseudogene 1","termid":"PBO:0042530"}


id: FYPO:0006754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which promoter-enhancer looping occurs to a lower extent than normal when the cell is subject to glucose starvation. Promoter-enhancer looping is mediated by interactions between proteins bound to DNA at promoters and at enhancers, or by a single protein binding at both sites.","definition_xrefs":["PMID:28934464","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"decreased promoter-enhancer looping during glucose starvation","synonyms":[{"name":"decreased promoter-enhancer looping during glucose depletion","type":"exact"},{"name":"decreased promoter-enhancer looping during glucose deprivation","type":"exact"}],"termid":"FYPO:0006754"}


id: PBO:0003449
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.71","termid":"PBO:0003449"}


id: PBO:0079415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 9","termid":"PBO:0079415"}


id: PBO:0029536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_small_cells_(obsolete_FYPO:0002186)","termid":"PBO:0029536"}


id: PBO:0087587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the APT subcomplex of cleavage and polyadenylation factor; may have a role in 3' end formation of both polyadenylated and non-polyadenylated RNAs; SYC1 has a paralog, YSH1, that arose from the whole genome duplication","termid":"PBO:0087587"}


id: GO:0050694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyllactosamine + 3'-phosphoadenosine 5'-phosphosulfate = 3-sulfo-N-acetyllactosamine + adenosine 3',5'-bisphosphate. N-acetyllactosamine residues are found in a number of different carbohydrate types. N-acetyllactosamine can also be written as Gal-beta-(1,4)-GlcNAc.","definition_xrefs":["PMID:11323440","PMID:11356829","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"galactose 3-O-sulfotransferase activity","synonyms":[{"name":"Gal-3-O-sulfotransferase activity","type":"exact"},{"name":"galactose 3-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0050694"}


id: PBO:0083519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRPL9/YGR220C","termid":"PBO:0083519"}


id: GO:0044301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The axon of inferior olive neuron that projects to the cerebellar cortex, largely via the inferior cerebellar peduncle. They range in diameter from 1-3 um and are myelinated until they enter the granule cell layer. They give off collaterals to the deep cerebellar nuclei. They synapse extensively with the dendrites of Purkinje cells in the molecular layer, where each fiber branches repeatedly to climb along the Purkinje cell dendritic tree. Each Purkinje cell is innervated by only a single climbing fiber.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"climbing fiber","synonyms":[{"name":"climbing fibre","type":"exact"}],"termid":"GO:0044301"}


id: PBO:0039030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 6","termid":"PBO:0039030"}


id: PBO:0090234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex scaffold subunit 1","termid":"PBO:0090234"}


id: PBO:0108553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2 (meiRNA), long isoform","termid":"PBO:0108553"}


id: PBO:0080514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASF1 pseudogene 1","termid":"PBO:0080514"}


id: PR:Q09817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal export protein NMD3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00310","PANTHER:PTHR12746:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal export protein nmd3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.03","secondary_identifiers":["UniProtKB:Q09817"],"synonyms":[{"name":"Spom972h-NMD3","type":"exact"}],"termid":"PR:Q09817"}


id: PBO:0074450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival of motor neuron 2, centromeric","termid":"PBO:0074450"}


id: PR:O74368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of mitochondrial morphology protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.01c","synonyms":[{"name":"Spom972h-mmm1","type":"exact"}],"termid":"PR:O74368"}


id: MOD:01180
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to 2-hydroxyglycine.","definition_xrefs":["PubMed:17431180","PubMed:17823333","RESID:AA0434","ChEBI:38048","PubMed:16178056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglycine observational artifact","synonyms":[{"name":"2-hydroxyglycine","type":"exact"},{"name":"2HyGly","type":"exact"},{"name":"alpha-hydroxyglycine","type":"exact"},{"name":"amino(hydroxy)acetic acid","type":"exact"},{"name":"aminohydroxyacetic acid","type":"exact"}],"termid":"MOD:01180"}


id: SO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region localized within the lipid bilayer where both ends traverse the same membrane.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramembrane_polypeptide_region","termid":"SO:0001075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_peptide_loop","secondary_identifiers":["BS:00155"],"synonyms":[{"name":"membrane peptide loop","type":"exact"},{"name":"membrane_loop","type":"related"}],"termid":"SO:0001076"}


id: PBO:0087756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface","termid":"PBO:0087756"}


id: FYPO:0001971
data:
  {"alleles_by_uniquename":{"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114323],"is_not":false,"summary":null,"term":"FYPO:0001971"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a chain of cells. Cells in the chain visually resemble wild-type cells, except that they remain connected, often via remnants of septum edging material, and may continue to undergo normal mitosis and septum formation.","definition_xrefs":["PomBase:vw","PMID:8873452","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03444":null},"genotype_count":1,"genotypes_by_uniquename":{"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in chained cells","references_by_uniquename":{"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03444"],"single_locus_genotype_uniquenames":["agn1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in chained cells during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in chained cells during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in chained cells","type":"exact"},{"name":"cell clumping","type":"related"},{"name":"clumped cells","type":"related"}],"termid":"FYPO:0001971","terms_by_termid":{"FYPO:0001971":null}}


id: PBO:0075047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-10","termid":"PBO:0075047"}


id: GO:0008236
data:
  {"annotated_genes":["SJAG_04819","SJAG_03258","SJAG_02432","SJAG_04928","SJAG_05286","SJAG_01136","SJAG_03121","SJAG_00975","SJAG_02809","SJAG_00984","SJAG_00737","SJAG_02565","SJAG_03261","SJAG_04398","SJAG_01285","SJAG_04785","SJAG_03648","SJAG_03910","SJAG_01868"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84667],"is_not":false,"summary":null,"term":"GO:0008236"},{"annotations":[77834,74611,75184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[74052,103261,99078,113391,74591,73572,77927,104354,89564,87059,88687,76048,75244,96580,99072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[73347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"serine hydrolase activity","termid":"GO:0017171"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0140096","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"serine-type peptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1461993","Reactome:R-HSA-2022383","Reactome:R-HSA-6801766","Reactome:R-HSA-3132753","Reactome:R-HSA-9839072","Reactome:R-HSA-9839110"],"synonyms":[{"name":"serine protease activity","type":"narrow"}],"termid":"GO:0008236","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null}}


id: PBO:0056323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 6","termid":"PBO:0056323"}


id: PR:Q09909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.09","synonyms":[{"name":"Spom972h-cwf19","type":"exact"},{"name":"complexed with cdc5 protein 19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09909"}


id: GO:0047873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate + H2O = dolichol + phosphate.","definition_xrefs":["MetaCyc:DOLICHYL-PHOSPHATASE-RXN","EC:3.1.3.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"dolichyl-phosphatase activity","secondary_identifiers":["RHEA:13797"],"synonyms":[{"name":"Dol-P phosphatase activity","type":"related"},{"name":"Dol-P-P phosphohydrolase activity","type":"exact"},{"name":"dolichol monophosphatase activity","type":"related"},{"name":"dolichol phosphatase activity","type":"related"},{"name":"dolichol phosphate phosphatase activity","type":"related"},{"name":"dolichyl monophosphate phosphatase activity","type":"related"},{"name":"dolichyl phosphate phosphatase activity","type":"related"},{"name":"dolichyl pyrophosphate phosphatase activity","type":"exact"},{"name":"dolichyl-phosphate phosphohydrolase activity","type":"related"},{"name":"polyisoprenyl phosphate phosphatase activity","type":"related"},{"name":"polyprenylphosphate phosphatase activity","type":"related"}],"termid":"GO:0047873"}


id: GO:0030294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of a receptor signaling protein tyrosine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase inhibitor activity","termid":"GO:0030292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0098772","GO:0004857","GO:0003674"],"is_obsolete":false,"name":"receptor signaling protein tyrosine kinase inhibitor activity","synonyms":[{"name":"receptor signalling protein tyrosine kinase inhibitor activity","type":"exact"}],"termid":"GO:0030294"}


id: PBO:0050714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1","termid":"PBO:0050714"}


id: PR:O74895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl15 gene.","definition_xrefs":["UniProtKB:O74895","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.11","synonyms":[{"name":"Spom972h-rpl15","type":"exact"}],"termid":"PR:O74895"}


id: PBO:0067119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 164, pseudogene","termid":"PBO:0067119"}


id: PR:000050532
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me1:(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf2/Me1:(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050532"}


id: PBO:0052564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 1","termid":"PBO:0052564"}


id: PBO:0071983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 12","termid":"PBO:0071983"}


id: GO:0031634
data:
  {"annotated_genes":["SJAG_04855","SJAG_00247","SJAG_00073"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990943"},{"annotations":[110076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[97544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"Binding to replication fork barriers, sites that inhibit the progress of replication forks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031634","terms_by_termid":{"GO:0043110":null,"GO:0110035":null,"GO:1990943":null}}


id: PBO:0059557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1A","termid":"PBO:0059557"}


id: PBO:0015700
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.3x10^4 min-1 M-1","termid":"PBO:0015700"}


id: PBO:0050776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine (serotonin) oxygenase regulator","termid":"PBO:0050776"}


id: PBO:0029783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_morphology_(obsolete_FYPO:0002454)","termid":"PBO:0029783"}


id: GO:0031100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a lost or destroyed animal organ.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ regeneration","termid":"GO:0031100"}


id: PBO:0031867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter (predicted)","termid":"PBO:0031867"}


id: PBO:0082413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional carbamoylphosphate synthetase/aspartate transcarbamylase; catalyzes the first two enzymatic steps in the de novo biosynthesis of pyrimidines; both activities are subject to feedback inhibition by UTP","termid":"PBO:0082413"}


id: PBO:0110286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caprin, Cpn1","termid":"PBO:0110286"}


id: GO:0020013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism modulates the frequency, rate or extent of erythrocyte aggregation in its host organism, e.g. the binding of parasite-infected erythrocytes to uninfected erythrocytes.","definition_xrefs":["GOC:dgh","GOC:pr","PMID:19467172","PMID:21305024","GOC:add","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"erythrocyte aggregation","termid":"GO:0034117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of host erythrocyte aggregation","secondary_identifiers":["Wikipedia:Rosetting"],"synonyms":[{"name":"rosetting","type":"exact"}],"termid":"GO:0020013"}


id: PBO:0076995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP9 antisense RNA 1","termid":"PBO:0076995"}


id: GO:0102304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = 7-epi-sesquithujene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.102","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sesquithujene synthase activity","secondary_identifiers":["MetaCyc:RXN-12838","RHEA:31991"],"termid":"GO:0102304"}


id: GO:0031712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B1 bradykinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"B1 bradykinin receptor binding","synonyms":[{"name":"B1 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031712"}


id: GO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NAD+ = FMN + NADH + 2 H+.","definition_xrefs":["RHEA:21620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"FMN reductase (NADH) activity","secondary_identifiers":["KEGG_REACTION:R05705","EC:1.5.1.42"],"synonyms":[{"name":"NADH dehydrogenase (FMN) activity","type":"exact"},{"name":"NADH-FMN reductase activity","type":"related"},{"name":"NADH-dependent FMN reductase activity","type":"related"}],"termid":"GO:0052874"}


id: GO:0060007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vestibular reflex by which a response to a linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the otolith and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:dph","PMID:11784757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular reflex","termid":"GO:0060005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"linear vestibuloocular reflex","termid":"GO:0060007"}


id: FYPO:0000251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on galactose carbon source","synonyms":[{"name":"decreased growth on galactose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on galactose carbon source","type":"exact"},{"name":"growth defects, growth inhibition in galactose-based medium","type":"related"},{"name":"reduced cell growth on galactose carbon source","type":"exact"},{"name":"slow cell growth on galactose carbon source","type":"narrow"}],"termid":"FYPO:0000251"}


id: PBO:0027724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_fusion_during_cellular_hypotonic_response","termid":"PBO:0027724"}


id: GO:0030548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor regulator activity","termid":"GO:0099602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}


id: PBO:0034544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_maintenance_of_protein_localization_in_vacuole,_with_protein_secreted","termid":"PBO:0034544"}


id: GO:0035982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["GOC:kmv","PMID:20523893"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent behavioral decline (obsolete GO:0035982)","synonyms":[{"name":"age-dependent behavioural decline","type":"exact"},{"name":"age-related behavioral decline","type":"exact"},{"name":"behavioral aging","type":"exact"}],"termid":"GO:0035982"}


id: PBO:0072621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 6 homolog A","termid":"PBO:0072621"}


id: PBO:0074647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 37","termid":"PBO:0074647"}


id: PATO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coating which is oily and slippery.","definition_xrefs":[".answers.com:.answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coating","termid":"PATO:0002012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"greasy","termid":"PATO:0001606"}


id: PBO:0030752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcriptional_response_to_pheromone_at_increased_pheromone_level_(obsolete_FYPO:0000985)","termid":"PBO:0030752"}


id: PR:Q9P6J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02335","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized deaminase C1683.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.02","secondary_identifiers":["UniProtKB:Q9P6J8"],"synonyms":[{"name":"Spom972h-ADA","type":"exact"}],"termid":"PR:Q9P6J8"}


id: GO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the P-TEFb-cap methyltransferase complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"P-TEFb-cap methyltransferase complex localization","synonyms":[{"name":"P-TEFb-cap methyltransferase complex localisation","type":"exact"},{"name":"establishment and maintenance of P-TEFb-cap methyltransferase complex localization","type":"exact"}],"termid":"GO:0070817"}


id: PBO:0012248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 5, Pup2 (predicted)","termid":"PBO:0012248"}


id: PBO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_vacuolar_transport","termid":"PBO:0031611"}


id: PR:O13810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate 5-kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate 5-kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.13c","secondary_identifiers":["UniProtKB:O13810"],"synonyms":[{"name":"GK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-proB","type":"exact"},{"name":"gamma-glutamyl kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13810"}


id: GO:0033441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"AAU codon-amino acid adaptor activity","synonyms":[{"name":"AAT codon-amino acid adaptor activity","type":"exact"},{"name":"asparagine tRNA","type":"related"}],"termid":"GO:0033441"}


id: PBO:0067265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 339, pseudogene","termid":"PBO:0067265"}


id: PBO:0084496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in synaptonemal complex assembly; implicated in regulation of crossover formation; required for sporulation","termid":"PBO:0084496"}


id: PBO:0012835
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens NRAS","termid":"PBO:0012835"}


id: GO:1905204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of connective tissue replacement.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","GOC:bc","GOC:BHF","GOC:TermGenie","PMID:25590961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of connective tissue replacement","termid":"GO:1905203"},{"relation_name":"negatively_regulates","term_name":"connective tissue replacement","termid":"GO:0097709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of connective tissue replacement","synonyms":[{"name":"down regulation of connective tissue replacement","type":"exact"},{"name":"down-regulation of connective tissue replacement","type":"exact"},{"name":"downregulation of connective tissue replacement","type":"exact"},{"name":"inhibition of connective tissue replacement","type":"narrow"}],"termid":"GO:1905204"}


id: GO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dCMP, deoxycytidine monophosphate, to produce dCDP. Addition of two phosphate groups produces dCTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dCMP phosphorylation","termid":"GO:0061567"}


id: GO:0016505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a peptidase that is involved in the apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"peptidase activator activity involved in apoptotic process","synonyms":[{"name":"apoptotic protease activator activity","type":"narrow"}],"termid":"GO:0016505"}


id: PBO:0070234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 172 pseudogene","termid":"PBO:0070234"}


id: PBO:0066525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 1","termid":"PBO:0066525"}


id: GO:1903973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to macrophage colony-stimulating factor stimulus.","definition_xrefs":["PMID:19100238","GO_REF:0000058","GOC:BHF","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to macrophage colony-stimulating factor","termid":"GO:1903970"},{"relation_name":"is_a","term_name":"regulation of cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:1903972"},{"relation_name":"negatively_regulates","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"down regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"down regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"down regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"down-regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"down-regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"down-regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"downregulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"downregulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"downregulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"inhibition of cellular response to M-CSF stimulus","type":"narrow"},{"name":"inhibition of cellular response to macrophage colony-stimulating factor","type":"narrow"},{"name":"inhibition of cellular response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"negative regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"negative regulation of cellular response to macrophage colony-stimulating factor","type":"exact"}],"termid":"GO:1903973"}


id: GO:1901874
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["GOC:yaf","PMID:21209915","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"negatively_regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-translational protein modification","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"down regulation of PTM","type":"exact"},{"name":"down regulation of post-translational amino acid modification","type":"exact"},{"name":"down regulation of post-translational modification","type":"exact"},{"name":"down regulation of post-translational protein modification","type":"exact"},{"name":"down regulation of posttranslational amino acid modification","type":"exact"},{"name":"down regulation of posttranslational modification","type":"exact"},{"name":"down regulation of posttranslational protein modification","type":"exact"},{"name":"down-regulation of PTM","type":"exact"},{"name":"down-regulation of post-translational amino acid modification","type":"exact"},{"name":"down-regulation of post-translational modification","type":"exact"},{"name":"down-regulation of post-translational protein modification","type":"exact"},{"name":"down-regulation of posttranslational amino acid modification","type":"exact"},{"name":"down-regulation of posttranslational modification","type":"exact"},{"name":"down-regulation of posttranslational protein modification","type":"exact"},{"name":"downregulation of PTM","type":"exact"},{"name":"downregulation of post-translational amino acid modification","type":"exact"},{"name":"downregulation of post-translational modification","type":"exact"},{"name":"downregulation of post-translational protein modification","type":"exact"},{"name":"downregulation of posttranslational amino acid modification","type":"exact"},{"name":"downregulation of posttranslational modification","type":"exact"},{"name":"downregulation of posttranslational protein modification","type":"exact"},{"name":"inhibition of PTM","type":"exact"},{"name":"inhibition of post-translational amino acid modification","type":"exact"},{"name":"inhibition of post-translational modification","type":"exact"},{"name":"inhibition of post-translational protein modification","type":"narrow"},{"name":"inhibition of posttranslational amino acid modification","type":"exact"},{"name":"inhibition of posttranslational modification","type":"exact"},{"name":"inhibition of posttranslational protein modification","type":"exact"},{"name":"negative regulation of PTM","type":"exact"},{"name":"negative regulation of post-translational amino acid modification","type":"exact"},{"name":"negative regulation of post-translational modification","type":"exact"},{"name":"negative regulation of posttranslational amino acid modification","type":"exact"},{"name":"negative regulation of posttranslational modification","type":"exact"},{"name":"negative regulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901874","terms_by_termid":{"GO:0033234":null}}


id: GO:0035574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of a methyl group from lysine at position 20 of the histone.","definition_xrefs":["GOC:sp","PMID:20622853"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 demethylation (obsolete GO:0035574)","termid":"GO:0035574"}


id: GO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"thyroid hormone mediated signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of thyroid hormone mediated signaling pathway","synonyms":[{"name":"regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002155"}


id: GO:0009029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-(1->6)-beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate + ATP = ADP + 2 H+ + lipid IV(a).","definition_xrefs":["EC:2.7.1.130","RHEA:20700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tetraacyldisaccharide 4'-kinase activity","secondary_identifiers":["KEGG_REACTION:R04657","MetaCyc:TETRAACYLDISACC4KIN-RXN"],"synonyms":[{"name":"ATP:2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-beta-D-1,6-glucosaminyl-beta-phosphate 4'-O-phosphotransferase activity","type":"related"},{"name":"lipid-A 4'-kinase activity","type":"related"}],"termid":"GO:0009029"}


id: PBO:0078706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-1","termid":"PBO:0078706"}


id: GO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparagine + H2O = L-aspartate + NH3.","definition_xrefs":["EC:3.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"asparaginase activity","secondary_identifiers":["MetaCyc:ASPARAGHYD-RXN","RHEA:21016","Reactome:R-HSA-6797627"],"synonyms":[{"name":"L-asparaginase activity","type":"related"},{"name":"L-asparagine amidohydrolase activity","type":"related"},{"name":"alpha-asparaginase activity","type":"related"},{"name":"asparaginase II","type":"related"},{"name":"colaspase activity","type":"related"},{"name":"crasnitin","type":"related"},{"name":"elspar","type":"related"},{"name":"leunase activity","type":"related"}],"termid":"GO:0004067"}


id: PBO:0028300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028300"}


id: PBO:0024877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf6 (predicted)","termid":"PBO:0024877"}


id: GO:0048357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the flower stem.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"pedicel mucilage metabolic process","termid":"GO:0048362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pedicel mucilage biosynthetic process","synonyms":[{"name":"pedicel mucilage anabolism","type":"exact"},{"name":"pedicel mucilage biosynthesis","type":"exact"},{"name":"pedicel mucilage formation","type":"exact"},{"name":"pedicel mucilage synthesis","type":"exact"}],"termid":"GO:0048357"}


id: PBO:0051997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji and AT-rich interaction domain containing 2","termid":"PBO:0051997"}


id: GO:0031487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class XVII myosin heavy chains and associated light chains.","direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"myosin XVII complex","termid":"GO:0031487"}


id: GO:0052814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain aldehyde + NAD+ = a medium-chain carboxylate + NADH + H+. Medium-chain aldehydes have a chain length of between 8 and 12 carbons.","definition_xrefs":["EC:1.2.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"medium-chain-aldehyde dehydrogenase activity","secondary_identifiers":["EC:1.2.1.-"],"synonyms":[{"name":"medium-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"medium-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"medium-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0052814"}


id: PBO:0064596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 2","termid":"PBO:0064596"}


id: PBO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decorin","termid":"PBO:0044637"}


id: GO:0042209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"orcinol catabolic process","secondary_identifiers":["UM-BBD_pathwayID:orc"],"synonyms":[{"name":"orcin catabolic process","type":"exact"},{"name":"orcin catabolism","type":"exact"},{"name":"orcinol breakdown","type":"exact"},{"name":"orcinol catabolism","type":"exact"},{"name":"orcinol degradation","type":"exact"}],"termid":"GO:0042209"}


id: PBO:0056593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing glycosylphosphatidylinositol anchor 2","termid":"PBO:0056593"}


id: GO:0035459
data:
  {"annotated_genes":["SJAG_03153","SJAG_02539","SJAG_05344","SJAG_02349","SJAG_03558","SJAG_05345","SJAG_00072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75306,74726,74319,75746,77073,71161,73984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle.","definition_xrefs":["GOC:lb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle cargo loading","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cargo loading into vesicle","type":"exact"},{"name":"cargo selection","type":"exact"}],"termid":"GO:0035459","terms_by_termid":{"GO:0090110":null}}


id: GO:0045324
data:
  {"annotated_genes":["SJAG_03783","SJAG_00416","SJAG_02117","SJAG_03250","SJAG_02912","SJAG_01981","SJAG_03892","SJAG_04554","SJAG_01229","SJAG_16459","SJAG_02315","SJAG_02234","SJAG_00777","SJAG_00301","SJAG_03403","SJAG_05207","SJAG_01598","SJAG_01586","SJAG_04966","SJAG_03005","SJAG_04024","SJAG_04349","SJAG_04912","SJAG_02584","SJAG_01242","SJAG_04822","SJAG_04489","SJAG_00204","SJAG_02049","SJAG_04643","SJAG_04070","SJAG_05303","SJAG_01876","SJAG_04936","SJAG_00821","SJAG_03756","SJAG_01281","SJAG_00380","SJAG_04552","SJAG_04047","SJAG_00900","SJAG_01527","SJAG_02349","SJAG_03511","SJAG_07012","SJAG_04023","SJAG_05245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73349,74635,75531,76014,85682,91912,95542,95601,96409,97252,100914,102816,104154,104952,106008,111905,113383],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[98981,94011,74585,105345,102316,77742,99378,75082,94190,98395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[72959,93300,101764,70834,97388,77068,91342,71919,96182,104531,83692,86955,71897,70617,76862,109763,72779,83524,76555,87089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to the vacuole. In yeast, after transport to the prevacuolar compartment, endocytic content is delivered to the late endosome and on to the vacuole. This pathway is analogous to endosome to lysosome transport.","definition_xrefs":["PMID:11872141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01876":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03250":null,"SJAG_03403":null,"SJAG_03511":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04554":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"late endosome to vacuole transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0045324","terms_by_termid":{"GO:0032511":null,"GO:0043328":null,"GO:0045324":null}}


id: PBO:0041086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 1","termid":"PBO:0041086"}


id: PBO:0068995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 239, pseudogene","termid":"PBO:0068995"}


id: GO:0003385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of an amphid sensory organ over time, from its formation to the mature state.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"amphid sensory organ development","termid":"GO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in amphid sensory organ development","synonyms":[{"name":"cell-cell signalling involved in amphid sensory organ development","type":"exact"}],"termid":"GO:0003385"}


id: PBO:0090826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase","termid":"PBO:0090826"}


id: GO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and a sterol molecule (e.g. cholesterol).","definition_xrefs":["GOC:pde","GOC:mah","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol esterification (obsolete GO:0034434)","termid":"GO:0034434"}


id: PBO:0070624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 8","termid":"PBO:0070624"}


id: GO:0005034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sensing extracellular osmolarity to initiate a change in cell activity, and spanning the membrane of the cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0038023","GO:0140299"],"is_obsolete":false,"name":"osmosensor activity","termid":"GO:0005034"}


id: PBO:0086665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry; SWAT-GFP fusion protein localizes to the nucleus","termid":"PBO:0086665"}


id: GO:1904701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Wnt-Frizzled-LRP5/6 complex.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000079","PMID:11448771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Wnt-Frizzled-LRP5/6 complex assembly","synonyms":[{"name":"Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"Frizzled-LRP5/6 complex formation","type":"related"},{"name":"WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"Wnt receptor complex assembly","type":"broad"},{"name":"Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"}],"termid":"GO:1904701"}


id: PBO:0074695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70E","termid":"PBO:0074695"}


id: GO:0102273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionate + L-gamma-glutamyl-L-cysteinyl-beta-alaninate = gamma-Glu-Cys-gamma-Glu-Cys-beta-Ala + glycine.","definition_xrefs":["GOC:pz","EC:2.3.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"homophytochelatin synthase (dimmer forming) activity","secondary_identifiers":["MetaCyc:RXN-12529"],"termid":"GO:0102273"}


id: GO:0170002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sodium-specific negative tropism that is crucial for surviving and thriving under high salinity.","definition_xrefs":["PMID:36243013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halotropism","synonyms":[{"name":"root halotropism","type":"exact"}],"termid":"GO:0170002"}


id: GO:1900765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emericellin metabolic process","termid":"GO:1900764"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"emericellin catabolic process","synonyms":[{"name":"Variecoxanthone B breakdown","type":"related"},{"name":"Variecoxanthone B catabolic process","type":"related"},{"name":"Variecoxanthone B catabolism","type":"related"},{"name":"Variecoxanthone B degradation","type":"related"},{"name":"emericellin breakdown","type":"exact"},{"name":"emericellin catabolism","type":"exact"},{"name":"emericellin degradation","type":"exact"}],"termid":"GO:1900765"}


id: PBO:0089961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain","termid":"PBO:0089961"}


id: PBO:0026786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascus_morphology","termid":"PBO:0026786"}


id: PBO:0052726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 18","termid":"PBO:0052726"}


id: GO:0014703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within oscillatory skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Oscillatory muscle contraction occurs in insect wing muscles and is characterized by asynchrony between action potential and contraction and by stretch activation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oscillatory muscle contraction","termid":"GO:0014703"}


id: FYPO:0006576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which abnormal negative regulation of the initiation of mitotic DNA replication results in one or more rounds of rereplication of the entire genome, and other features of S phase are abnormal. Rounds of replication are not correlated with G1/S phase gene expression, and origin usage is altered.","definition_xrefs":["PomBase:mah","PMID:19487461","PMID:20736315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication, with abnormal S phase","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with abnormal S phase, during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication, with abnormal S phase, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in continuous DNA synthesis","type":"related"}],"termid":"FYPO:0006576"}


id: PBO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this is not NADH complex associated in yeast, which do not have the other 40 subunits that are present in that complex in mammals, see associated refs for more info on the human protein","termid":"PBO:0016980"}


id: GO:0086079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from a Purkinje myocyte to a ventricular cardiac muscle cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"gap junction channel activity involved in Purkinje myocyte-ventricular cardiac muscle cell electrical coupling","termid":"GO:0086079"}


id: GO:0016814
data:
  {"annotated_genes":["SJAG_04189","SJAG_03275","SJAG_04711","SJAG_03771","SJAG_04156","SJAG_01997","SJAG_04380","SJAG_00376","SJAG_01673","SJAG_02400","SJAG_01054","SJAG_04123","SJAG_04681","SJAG_00352","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[69825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[103553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[84725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047844"},{"annotations":[112162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[69872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[83047,96434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[77399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[69965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[75429,74698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[103049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"},{"annotations":[96402,99492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[71412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00352":null,"SJAG_00376":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_02400":null,"SJAG_03275":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04156":null,"SJAG_04189":null,"SJAG_04380":null,"SJAG_04681":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.-"],"termid":"GO:0016814","terms_by_termid":{"GO:0003876":null,"GO:0003934":null,"GO:0003935":null,"GO:0003937":null,"GO:0004126":null,"GO:0004132":null,"GO:0004477":null,"GO:0004635":null,"GO:0008835":null,"GO:0008892":null,"GO:0043829":null,"GO:0047844":null,"GO:0052717":null}}


id: PBO:0061444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR2F2 antisense RNA 1","termid":"PBO:0061444"}


id: GO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"negative regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050858"},{"relation_name":"negatively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of T cell receptor signaling pathway","synonyms":[{"name":"down regulation of T cell receptor signaling pathway","type":"exact"},{"name":"down-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"downregulation of T cell receptor signaling pathway","type":"exact"},{"name":"inhibition of T cell receptor signaling pathway","type":"narrow"},{"name":"negative regulation of T cell receptor signalling pathway","type":"exact"},{"name":"negative regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"negative regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of TCR signaling pathway","type":"exact"}],"termid":"GO:0050860"}


id: GO:0015989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of protons against an electrochemical gradient, using energy from light.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete light-driven proton transport (obsolete GO:0015989)","termid":"GO:0015989"}


id: PBO:0078389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-4","termid":"PBO:0078389"}


id: GO:0042134
data:
  {"annotated_genes":["SJAG_02530","SJAG_03952","SJAG_03252","SJAG_04492","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73004,86968,93321,101862,108987],"is_not":false,"summary":null,"term":"GO:0042134"}]},"cv_name":"molecular_function","definition":"Binding to an unprocessed ribosomal RNA transcript.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02530":null,"SJAG_02723":null,"SJAG_03252":null,"SJAG_03952":null,"SJAG_04492":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"rRNA primary transcript binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pre-rRNA binding","type":"exact"}],"termid":"GO:0042134","terms_by_termid":{"GO:0042134":null}}


id: PBO:0064414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8A","termid":"PBO:0064414"}


id: GO:0035882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythmic process of defecation that consists of an intestinal oscillator which regulates calcium waves. These waves in turn control a stereotypical, three-part pattern of muscle contractions. In some organisms, defecation can recur with a regularity more frequent than every 24 hours. For example, in a well-fed Caenorhabditis elegans, the defecation motor program occurs approximately every 45 seconds, and is temperature- and touch-compensated.","definition_xrefs":["PMID:7479775","PMID:8158250","PMID:9066270","GOC:kmv","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ultradian rhythm","termid":"GO:0007624"},{"relation_name":"part_of","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defecation rhythm","synonyms":[{"name":"DMP","type":"exact"},{"name":"defecation behavior","type":"related"},{"name":"defecation cycle","type":"exact"},{"name":"defecation motor program","type":"exact"}],"termid":"GO:0035882"}


id: PBO:0025443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maple Syrup Urine Disease","termid":"PBO:0025443"}


id: GO:1905356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27268497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"}


id: GO:0042839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-glucuronate metabolic process","synonyms":[{"name":"D-glucuronate metabolism","type":"exact"}],"termid":"GO:0042839"}


id: PR:Q09892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase HOG1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase sty1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.06c","secondary_identifiers":["PR:000027500","UniProtKB:Q09892"],"synonyms":[{"name":"HOG1","type":"related"},{"name":"PHH1","type":"related"},{"name":"SPAC24B11.06C","type":"related"},{"name":"SPC1","type":"related"},{"name":"Spom972h-HOG1","type":"exact"}],"termid":"PR:Q09892"}


id: PBO:0085365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosyl-glycinamide transformylase; catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway","termid":"PBO:0085365"}


id: GO:0031337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur amino acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen compound metabolic process","termid":"GO:0051173"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of sulfur amino acid metabolic process","synonyms":[{"name":"activation of sulfur amino acid metabolic process","type":"narrow"},{"name":"positive regulation of sulfur amino acid metabolism","type":"exact"},{"name":"stimulation of sulfur amino acid metabolic process","type":"narrow"},{"name":"up regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"up-regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"upregulation of sulfur amino acid metabolic process","type":"exact"}],"termid":"GO:0031337"}


id: PBO:0063301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1B","termid":"PBO:0063301"}


id: PR:O94715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1501 gene.","definition_xrefs":["UniProtKB:O94715","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.03","synonyms":[{"name":"Spom972h-rps1501","type":"exact"}],"termid":"PR:O94715"}


id: PBO:0041595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 6","termid":"PBO:0041595"}


id: PBO:0053942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1243","termid":"PBO:0053942"}


id: PBO:0033791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033791"}


id: PBO:0061766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OAZ1 pseudogene 1","termid":"PBO:0061766"}


id: PBO:0084882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial RNA polymerase specificity factor; has structural similarity to S-adenosylmethionine-dependent methyltransferases and functional similarity to bacterial sigma-factors; Mtf1p interacts with and stabilizes the Rpo41p-promoter complex, enhancing DNA bending and melting to facilitate pre-initiation open complex formation","termid":"PBO:0084882"}


id: PBO:0074218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC44A3 antisense RNA 1","termid":"PBO:0074218"}


id: GO:0042096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-beta T cell receptor activity (obsolete GO:0042096)","synonyms":[{"name":"alpha-beta T cell receptor activity","type":"exact"}],"termid":"GO:0042096"}


id: SO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prokaryotic_promoter","termid":"SO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter","synonyms":[{"name":"bacterial RNApol promoter","type":"exact"}],"termid":"SO:0000613"}


id: GO:0015923
data:
  {"annotated_genes":["SJAG_02711","SJAG_04850","SJAG_04851","SJAG_03032","SJAG_01858","SJAG_01883","SJAG_00310","SJAG_05272"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004559"},{"annotations":[97518,97509,113710,92293,97519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[91093,66764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00310":null,"SJAG_01858":null,"SJAG_01883":null,"SJAG_02711":null,"SJAG_03032":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015923","terms_by_termid":{"GO:0004559":null,"GO:0004571":null,"GO:0008496":null}}


id: PBO:0042307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 1","termid":"PBO:0042307"}


id: PBO:0049337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2H2 family member C, copy 2","termid":"PBO:0049337"}


id: GO:0140067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The butyrylation of a lysine residue in a protein. Butyryl is the univalent radical C3H7COO- derived from butyric acid.","definition_xrefs":["PMID:27105113","Wikipedia:butyryl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine butyrylation","termid":"GO:0140067"}


id: GO:0046745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a capsid acquires another membrane envelope, subsequent to acquiring an initial membrane envelope.","definition_xrefs":["ISBN:0072370319","ISBN:0781718325","PMID:11533156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral capsid secondary envelopment","secondary_identifiers":["GO:0046748","GO:0046769","GO:0046746","GO:0046747","GO:0046768","GO:0046770"],"synonyms":[{"name":"ER membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"Golgi membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"endoplasmic reticulum membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"inner nuclear membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"nuclear membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"outer nuclear membrane viral budding during viral capsid re-envelopment","type":"exact"},{"name":"plasma membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"viral budding from ER membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from ER membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from Golgi membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from Golgi membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from inner nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from outer nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from outer nuclear membrane during viral capsid re-envelopment","type":"exact"},{"name":"viral budding from plasma membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from plasma membrane during viral capsid re-envelopment","type":"related"},{"name":"viral capsid re-envelopment","type":"related"},{"name":"virus budding from ER membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from ER membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from Golgi membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from Golgi membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from inner nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from inner nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from outer nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from outer nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from plasma membrane during viral capsid re-envelopment","type":"related"}],"termid":"GO:0046745"}


id: FYPO:0004726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle orientation correction is normal (i.e. indistinguishable from wild type). Spindle orientation correction is the process by which a spindle that has formed in, or moved into, an incorrect orientation is restored to the correct orientation (parallel to the long axis of the cell).","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic spindle orientation correction","synonyms":[{"name":"normal correction of mitotic spindle orientation","type":"exact"},{"name":"normal mitotic spindle orientation correction during vegetative growth","type":"exact"},{"name":"normal repair of mitotic mono-orientation defect","type":"exact"},{"name":"normal spindle orientation correction during mitosis","type":"exact"},{"name":"normal spindle orientation correction during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004726"}


id: PBO:0084053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for yeast Rab family members; members include Ypt7p (most effective), Ypt1p, Ypt31p, and Ypt32p (in vitro); involved in vesicle mediated protein trafficking; contains a PH-like domain","termid":"PBO:0084053"}


id: GO:0006591
data:
  {"annotated_genes":["SJAG_01461","SJAG_04546","SJAG_00635","SJAG_00695","SJAG_01592","SJAG_00043","SJAG_00636","SJAG_03398","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106282],"is_not":false,"summary":null,"term":"GO:0006591"},{"annotations":[97875,70176,77092,113338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[70484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[113340,93496,75596,71977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"},{"annotations":[74706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03398":null,"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ornithine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ornithine metabolism","type":"exact"}],"termid":"GO:0006591","terms_by_termid":{"GO:0006591":null,"GO:0006592":null,"GO:0019547":null,"GO:0033387":null,"GO:0042450":null}}


id: GO:0060956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell differentiation","termid":"GO:0060956"}


id: PR:Q9UTP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.05 gene.","definition_xrefs":["UniProtKB:Q9UTP9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.05","synonyms":[{"name":"Spom972h-SPAC1093.05","type":"exact"}],"termid":"PR:Q9UTP9"}


id: GO:1905793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a pericentriolar material.","definition_xrefs":["GO_REF:0000087","PMID:21694707","GOC:TermGenie","PMID:24385583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to pericentriolar material","synonyms":[{"name":"protein localisation in pericentriolar material","type":"exact"},{"name":"protein localisation to pericentriolar material","type":"exact"},{"name":"protein localization in pericentriolar material","type":"exact"}],"termid":"GO:1905793"}


id: PBO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 10","termid":"PBO:0052686"}


id: FYPO:0004222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004222"}


id: GO:0060599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of a mammary duct.","definition_xrefs":["GOC:dph","PMID:17120154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland duct secondary branching","type":"exact"}],"termid":"GO:0060599"}


id: PBO:0029559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cilofungin","termid":"PBO:0029559"}


id: FYPO:0003670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mycophenolic acid. Cells stop growing (and may die) at a concentration of mycophenolic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to mycophenolic acid","synonyms":[{"name":"hypersensitive to mycophenolic acid","type":"exact"},{"name":"sensitive to MPA","type":"exact"},{"name":"sensitive to mycophenolic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to mycophenolic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003670"}


id: PR:Q10309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipid-transporting ATPase IIA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00966","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-transporting ATPase C6C3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.06c","secondary_identifiers":["UniProtKB:Q10309"],"synonyms":[{"name":"Spom972h-ATP9A","type":"exact"}],"termid":"PR:Q10309"}


id: PR:P36601
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein RAD51 homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.14c","secondary_identifiers":["UniProtKB:P36601"],"synonyms":[{"name":"RAD51 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC644.14c","type":"related"},{"name":"Spom972h-RAD51","type":"exact"},{"name":"rad51","type":"related"}],"termid":"PR:P36601"}


id: GO:0008258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Movement of the anterior ectoderm to the interior of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head involution","termid":"GO:0008258"}


id: PBO:0108891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 4","termid":"PBO:0108891"}


id: PBO:0080026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 12","termid":"PBO:0080026"}


id: PBO:0075813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 2","termid":"PBO:0075813"}


id: FYPO:0002302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spheroid, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, spheroid cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, rounded cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, spheroid cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, spheroid cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, spheroid cell","type":"exact"}],"termid":"FYPO:0002302"}


id: PBO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nystatin","termid":"PBO:0031354"}


id: PBO:0063636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFN2 antisense RNA 1","termid":"PBO:0063636"}


id: PBO:0076521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 31","termid":"PBO:0076521"}


id: PBO:0078372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 16-1","termid":"PBO:0078372"}


id: PBO:0067957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 259","termid":"PBO:0067957"}


id: PBO:0071415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 21","termid":"PBO:0071415"}


id: GO:2001218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001218)","synonyms":[{"name":"negative regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001218"}


id: GO:1902230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","GOC:BHF","PMID:15314165","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"down regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902230"}


id: PBO:0040684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 2","termid":"PBO:0040684"}


id: PBO:0062135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 2 pseudogene","termid":"PBO:0062135"}


id: GO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with adrenomedullin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor activity","termid":"GO:0097642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"adrenomedullin receptor activity","synonyms":[{"name":"G10D receptor","type":"narrow"}],"termid":"GO:0001605"}


id: PBO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNOT10 antisense RNA 1","termid":"PBO:0043474"}


id: GO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2.","definition_xrefs":["MetaCyc:ACETOLACTATE-DECARBOXYLASE-RXN","EC:4.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetolactate decarboxylase activity","secondary_identifiers":["RHEA:21580"],"synonyms":[{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase [(R)-2-acetoin-forming]","type":"related"},{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase activity","type":"related"},{"name":"alpha-acetolactate decarboxylase activity","type":"related"}],"termid":"GO:0047605"}


id: PBO:0083351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene HIP1/YGR191W","termid":"PBO:0083351"}


id: GO:0042875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-galactonate, the D-enantiomer of galactonate, is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"D-galactonate transmembrane transport","synonyms":[{"name":"D-galactonate transport","type":"related"}],"termid":"GO:0042875"}


id: GO:0009690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytokinin metabolic process","synonyms":[{"name":"cytokinin metabolism","type":"exact"}],"termid":"GO:0009690"}


id: PBO:0087317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small-subunit processome protein involved in pre-18S rRNA maturation; part of a subunit of the 90S preribosomal particle capable of interacting directly with the 5' ETS of the 35S pre-rRNA; contains WD40 repeats","termid":"PBO:0087317"}


id: PBO:0092007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Asparagine (guu), mitochondrial","termid":"PBO:0092007"}


id: PBO:0038405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within,_positive_effect","termid":"PBO:0038405"}


id: PBO:0040199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 12","termid":"PBO:0040199"}


id: GO:0042445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone metabolic process","secondary_identifiers":["GO:0034754"],"synonyms":[{"name":"cellular hormone metabolic process","type":"related"},{"name":"hormone metabolism","type":"exact"}],"termid":"GO:0042445"}


id: PBO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein iron-sulfur cluster assembly protein Nfu1 (predicted)","termid":"PBO:0016999"}


id: GO:0150005
data:
  {"annotated_genes":["SJAG_03751","SJAG_04950","SJAG_04943","SJAG_02231","SJAG_04190","SJAG_04910","SJAG_01386"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94957,88260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990334"},{"annotations":[84033,88299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120231"},{"annotations":[102333,91472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990877"},{"annotations":[71077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex capable of activating an enzyme. Activating subunits may dissociate from the catalytic unit before the enzyme is active.","definition_xrefs":["PMID:16244137","PMID:28710280","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01386":null,"SJAG_02231":null,"SJAG_03751":null,"SJAG_04190":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"enzyme activator complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0150005","terms_by_termid":{"GO:0043626":null,"GO:0120231":null,"GO:1990334":null,"GO:1990877":null}}


id: GO:1903606
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102661,89838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytochrome c.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:19721088","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome metabolic process","termid":"GO:1903604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome c metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome c metabolism","type":"exact"}],"termid":"GO:1903606","terms_by_termid":{"GO:1903607":null}}


id: PBO:0065634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 3","termid":"PBO:0065634"}


id: FYPO:0000209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal attachment of spindle microtubules to kinetochore during meiosis I","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"abnormal attachment of spindle microtubules to meiosis I kinetochore","type":"exact"},{"name":"abnormal kinetochore mono-orientation at meiosis I","type":"exact"},{"name":"abnormal kinetochore orientation at meiosis I","type":"exact"},{"name":"abnormal sister kinetochore mono-orientation","type":"exact"}],"termid":"FYPO:0000209"}


id: GO:0052784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of reuteran, a soluble glucan polymer with mainly alpha-(1->4) glycosidic linkages and significant amounts of alpha-(1->6) and alpha-(1->4,6) glucosidic linkages.","definition_xrefs":["PMID:16000808","GOC:mengo_curators","PMID:15256553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"reuteran metabolic process","termid":"GO:0052783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"reuteran biosynthetic process","synonyms":[{"name":"reuteransucrase-mediated reuteran biosynthesis","type":"narrow"}],"termid":"GO:0052784"}


id: GO:1900448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900448)","termid":"GO:1900448"}


id: PBO:0087755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; transposon insertion mutant is salt sensitive and null mutant has growth defects; non-tagged protein is detected in purified mitochondria","termid":"PBO:0087755"}


id: GO:0044241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested lipids into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid digestion","termid":"GO:0044241"}


id: GO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptidoglycan","termid":"GO:0071224"}


id: PBO:0003648
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.9","termid":"PBO:0003648"}


id: PBO:0043784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPB2 antisense RNA 1","termid":"PBO:0043784"}


id: PBO:0027083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity_during_cellular_response_to_adenine_starvation","termid":"PBO:0027083"}


id: PBO:0062756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 1","termid":"PBO:0062756"}


id: PBO:0087552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop6p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA","termid":"PBO:0087552"}


id: PBO:0045775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECRG4 augurin precursor","termid":"PBO:0045775"}


id: GO:0051681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"6-alpha-maltosylglucose metabolic process","termid":"GO:0051679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose catabolic process","synonyms":[{"name":"isopanose catabolic process","type":"exact"},{"name":"isopanose catabolism","type":"exact"}],"termid":"GO:0051681"}


id: GO:0019144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-sugar + H2O = AMP + sugar 1-phosphate.","definition_xrefs":["EC:3.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ADP-sugar diphosphatase activity","secondary_identifiers":["MetaCyc:ADPSUGPPHOSPHAT-RXN"],"synonyms":[{"name":"ADP-sugar pyrophosphatase activity","type":"related"},{"name":"ADP-sugar sugarphosphohydrolase activity","type":"related"},{"name":"ADPsugar pyrophosphatase activity","type":"related"},{"name":"adenosine diphosphosugar pyrophosphatase activity","type":"related"},{"name":"nucleoside diphosphate-sugar hydrolase activity","type":"broad"}],"termid":"GO:0019144"}


id: PBO:0054837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2251","termid":"PBO:0054837"}


id: PBO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26 (predicted)","termid":"PBO:0000231"}


id: SO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of a LINE1 mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L1_LINE_retrotransposon","termid":"SO:0002272"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE1_deletion","synonyms":[{"name":"LINE1 deletion","type":"related"}],"termid":"SO:0002069"}


id: RO:HOM0000016
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that involves a pseudogenic feature and its functional ancestor.","definition_xrefs":["SO:non_functional_homolog_of"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_non_functional_homology_relationship_with","synonyms":[{"name":"non functional homologous to","type":"exact"},{"name":"pseudogene","type":"broad"}],"termid":"RO:HOM0000016"}


id: FYPO:0000647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a vegetative cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"vegetative cell lysis","synonyms":[{"name":"cell lysis during vegetative growth","type":"exact"},{"name":"cytolysis during vegetative growth","type":"exact"},{"name":"inviable, lysed vegetative cell","type":"exact"},{"name":"vegetative cell lysis during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000647"}


id: GO:0005200
data:
  {"annotated_genes":["SJAG_04387","SJAG_02509","SJAG_01384","SJAG_03145","SJAG_04003","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70685,72843,74204,76522,77541,104230],"is_not":false,"summary":null,"term":"GO:0005200"}]},"cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01384":null,"SJAG_02509":null,"SJAG_03145":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005200","terms_by_termid":{"GO:0005200":null}}


id: GO:0008660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-aminocyclopropane-1-carboxylate + H2O = 2-oxobutanate + NH4.","definition_xrefs":["EC:3.5.99.7","RHEA:16933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase activity","secondary_identifiers":["MetaCyc:4.1.99.4-RXN","KEGG_REACTION:R00997","UM-BBD_reactionID:r0357","GO:0018806"],"synonyms":[{"name":"1-aminocyclopropane carboxylic acid deaminase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate aminohydrolase (isomerizing)","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate endolyase (deaminating) activity","type":"related"},{"name":"ACC deaminase activity","type":"related"}],"termid":"GO:0008660"}


id: GO:0047173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: retinol-[cellular-retinol-binding-protein] + phosphatidylcholine = retinyl-ester-[cellular-retinol-binding-protein] + 2-acylglycerophosphocholine.","definition_xrefs":["EC:2.3.1.135","MetaCyc:2.3.1.135-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine-retinol O-acyltransferase activity","secondary_identifiers":["Reactome:R-HSA-975608","RHEA:17469"],"synonyms":[{"name":"lecithin--retinol acyltransferase activity","type":"related"},{"name":"phosphatidylcholine:retinol-(cellular-retinol-binding-protein) O-acyltransferase activity","type":"related"},{"name":"phosphatidylcholine:retinol-[cellular-retinol-binding-protein] O-acyltransferase activity","type":"related"}],"termid":"GO:0047173"}


id: PATO:0002462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenous","termid":"PATO:0002462"}


id: GO:0010112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic acquired resistance","termid":"GO:0010112"}


id: PATO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000289 respiratory rate (obsolete PATO:0000289)","termid":"PATO:0000289"}


id: PBO:0057748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1843","termid":"PBO:0057748"}


id: PBO:0069436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 701, pseudogene","termid":"PBO:0069436"}


id: PATO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting a upward bending of its leaves or other plant parts.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyponastic","termid":"PATO:0002329"}


id: PBO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1","termid":"PBO:0050588"}


id: GO:0009957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mtg_sensu","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal cell fate specification","secondary_identifiers":["GO:0043356"],"synonyms":[{"name":"hypodermal cell fate specification","type":"related"}],"termid":"GO:0009957"}


id: GO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a bicyclic nitroimidazole.","definition_xrefs":["PMID:19039139","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicyclic nitroimidazole metabolic process","termid":"GO:0052801"},{"relation_name":"is_a","term_name":"nitroimidazole catabolic process","termid":"GO:0052804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"bicyclic nitroimidazole catabolic process","synonyms":[{"name":"bicyclic nitroimidazole breakdown","type":"exact"},{"name":"bicyclic nitroimidazole catabolism","type":"exact"},{"name":"bicyclic nitroimidazole degradation","type":"exact"}],"termid":"GO:0052800"}


id: GO:0061285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mesonephric capsule over time, from its formation to the mature structure. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule development","termid":"GO:0072127"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule development","termid":"GO:0061285"}


id: GO:0072161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in renal system development","termid":"GO:2001012"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"}


id: PBO:0053446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 393","termid":"PBO:0053446"}


id: PR:Q9HDZ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An immature colon carcinoma transcript 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11075:SF12","OMA:SCHPO01301","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 82 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.11","secondary_identifiers":["UniProtKB:Q9HDZ3"],"synonyms":[{"name":"Spom972h-ICT1","type":"exact"}],"termid":"PR:Q9HDZ3"}


id: PBO:0074521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A13","termid":"PBO:0074521"}


id: GO:0031338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"regulation of vesicle fusion","termid":"GO:0031338"}


id: PBO:0043904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein LCCL domain containing 1","termid":"PBO:0043904"}


id: PBO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-O","termid":"PBO:0090185"}


id: PR:O14156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase 1K, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13832:SF93","PRO:DNx","OMA:SCHPO01064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.03c","secondary_identifiers":["UniProtKB:O14156"],"synonyms":[{"name":"PP2C-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPM1K","type":"exact"}],"termid":"PR:O14156"}


id: GO:1902526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein monoubiquitination.","definition_xrefs":["PMID:21931591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"regulation of protein monoubiquitination","termid":"GO:1902525"},{"relation_name":"negatively_regulates","term_name":"protein monoubiquitination","termid":"GO:0006513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein monoubiquitination","synonyms":[{"name":"down regulation of protein monoubiquitination","type":"exact"},{"name":"down regulation of protein monoubiquitinylation","type":"exact"},{"name":"down regulation of protein monoubiquitylation","type":"exact"},{"name":"down-regulation of protein monoubiquitination","type":"exact"},{"name":"down-regulation of protein monoubiquitinylation","type":"exact"},{"name":"down-regulation of protein monoubiquitylation","type":"exact"},{"name":"downregulation of protein monoubiquitination","type":"exact"},{"name":"downregulation of protein monoubiquitinylation","type":"exact"},{"name":"downregulation of protein monoubiquitylation","type":"exact"},{"name":"inhibition of protein monoubiquitination","type":"narrow"},{"name":"inhibition of protein monoubiquitinylation","type":"narrow"},{"name":"inhibition of protein monoubiquitylation","type":"narrow"},{"name":"negative regulation of protein monoubiquitinylation","type":"exact"},{"name":"negative regulation of protein monoubiquitylation","type":"exact"}],"termid":"GO:1902526"}


id: GO:0009522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).","definition_xrefs":["GOC:ds","ISBN:0140514031","PMID:9821949","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem","termid":"GO:0009521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"photosystem I","termid":"GO:0009522"}


id: FYPO:0003239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphodiesterase I activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal phosphodiesterase I activity","termid":"FYPO:0003239"}


id: PBO:0038967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADNP homeobox 2","termid":"PBO:0038967"}


id: GO:0032494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["ISBN:0721601464","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to peptidoglycan","termid":"GO:0032494"}


id: GO:0052027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host signal transduction pathway","secondary_identifiers":["GO:0052250"],"synonyms":[{"name":"modulation by symbiont of host signal transduction","type":"related"},{"name":"modulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"modulation of host signal transduction by symbiont","type":"exact"},{"name":"modulation of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"perturbation of host signal transduction pathway","type":"exact"},{"name":"regulation by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052027"}


id: PBO:0069265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 521, pseudogene","termid":"PBO:0069265"}


id: PBO:0040864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix ARNT like 1","termid":"PBO:0040864"}


id: GO:0072513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardioblast proliferation in the second heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. The secondary heart field is the region of the heart that will form the majority of the mesodermal component of the right ventricle, the arterial pole (outflow tract) and the venous pole (inflow tract).","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"negative regulation of second heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0072513"}


id: PBO:0054092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1445","termid":"PBO:0054092"}


id: PBO:0054301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1692","termid":"PBO:0054301"}


id: GO:0048635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle organ development","synonyms":[{"name":"down regulation of muscle development","type":"exact"},{"name":"down-regulation of muscle development","type":"exact"},{"name":"downregulation of muscle development","type":"exact"},{"name":"inhibition of muscle development","type":"narrow"}],"termid":"GO:0048635"}


id: MOD:00939
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolyzed N-methylmaleimide cysteine adduct","synonyms":[{"name":"Nmethylmaleimide+water","type":"related"},{"name":"Nmethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:00939"}


