# terms

id: PBO:0042957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 11","termid":"PBO:0042957"}


id: GO:0021842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons away from the signal during migration from the subpallium to the cortex.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GOC:jid","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"negative chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021842"}


id: PBO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone (predicted)","termid":"PBO:0018198"}


id: PBO:0085247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidylprolyl-cis/trans-isomerase (PPIase); specific for phosphorylated S/T residues N-terminal to proline; regulates phosphorylation of RNAPII large subunit (Rpo21p) C-terminal domain (CTD) at Ser7; associates with phospho-Ser5 form of RNAPII in vivo; present along entire coding length of genes; represses initiation of CUTs; required for efficient termination of mRNA transcription, trimethylation of histone H3; human ortholog PIN1 can complement yeast null and ts mutants","termid":"PBO:0085247"}


id: PBO:0050391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 15","termid":"PBO:0050391"}


id: GO:0003353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cilium movement","termid":"GO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium movement","secondary_identifiers":["GO:1900174"],"synonyms":[{"name":"positive regulation of flagellar movement","type":"related"},{"name":"positive regulation of flagellum movement","type":"related"},{"name":"positive regulation of microtubule-based flagellum movement","type":"exact"}],"termid":"GO:0003353"}


id: PR:P30821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flavoprotein wrbA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00863","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P25 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.14c","secondary_identifiers":["UniProtKB:P30821"],"synonyms":[{"name":"Spom972h-wrbA","type":"exact"},{"name":"brefeldin A resistance protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30821"}


id: PBO:0057477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 596","termid":"PBO:0057477"}


id: PBO:0046715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 1","termid":"PBO:0046715"}


id: GO:0010490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-keto-rhamnose + NADPH = UDP-rhamnose + NADP+.","definition_xrefs":["GOC:tair_curators","PMID:17190829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"UDP-4-keto-rhamnose-4-keto-reductase activity","termid":"GO:0010490"}


id: PBO:0056639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 14 pseudogene 1","termid":"PBO:0056639"}


id: PBO:0004579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11 (predicted)","termid":"PBO:0004579"}


id: MOD:00715
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a methylated isoleucine residue, such as N-methyl-L-isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated isoleucine","synonyms":[{"name":"MeIle","type":"exact"}],"termid":"MOD:00715"}


id: GO:1901136
data:
  {"annotated_genes":["SJAG_04495","SJAG_02481","SJAG_03013","SJAG_04192","SJAG_00461","SJAG_04870","SJAG_01858","SJAG_03660","SJAG_03373","SJAG_02959","SJAG_00620","SJAG_02107","SJAG_02247","SJAG_01310","SJAG_00633","SJAG_01359","SJAG_02369","SJAG_00685","SJAG_06621","SJAG_04334","SJAG_03032","SJAG_02945","SJAG_00409","SJAG_00839","SJAG_03676","SJAG_02135","SJAG_03852","SJAG_02796","SJAG_00605","SJAG_01012","SJAG_00027","SJAG_06622","SJAG_03903","SJAG_03828","SJAG_04487","SJAG_04048","SJAG_05314","SJAG_02009","SJAG_04927","SJAG_00957","SJAG_02580","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[83157,83158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[87215,96796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[111410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[98633,104545,104547,104546,101026,93603,93336,104550,76589,100664,89924,104549,98895,104548,90397,100663,101025,100665,104551,111381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[76825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[69826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[94311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[77754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[89390,101698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"},{"annotations":[84155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[93521,106686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[75094,72512],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[107277,86545,74460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[91091,88964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[75230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00620":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01858":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02959":null,"SJAG_03013":null,"SJAG_03032":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate derivative catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative breakdown","type":"exact"},{"name":"carbohydrate derivative catabolism","type":"exact"},{"name":"carbohydrate derivative degradation","type":"exact"}],"termid":"GO:1901136","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006256":null,"GO:0009972":null,"GO:0015938":null,"GO:0034232":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0046135":null,"GO:0046168":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0097466":null,"GO:1901911":null}}


id: GO:0090293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to the modulation of the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:rb","PMID:19104072","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"part_of","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"nitrogen catabolite regulation of transcription","synonyms":[{"name":"regulation of transcription by nitrogen catabolites","type":"exact"}],"termid":"GO:0090293"}


id: PBO:0067945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 247","termid":"PBO:0067945"}


id: GO:1905010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-lysine import into cell.","definition_xrefs":["PMID:7499219","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-lysine import across plasma membrane","termid":"GO:1905008"},{"relation_name":"positively_regulates","term_name":"L-lysine import across plasma membrane","termid":"GO:0097639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-lysine import across plasma membrane","synonyms":[{"name":"activation of L-lysine import into cell","type":"narrow"},{"name":"positive regulation of L-lysine import into cell","type":"exact"},{"name":"up regulation of L-lysine import into cell","type":"exact"},{"name":"up-regulation of L-lysine import into cell","type":"exact"},{"name":"upregulation of L-lysine import into cell","type":"exact"}],"termid":"GO:1905010"}


id: PBO:0054677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2084","termid":"PBO:0054677"}


id: GO:0055089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of fatty acid within an organism or cell.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fatty acid homeostasis","termid":"GO:0055089"}


id: GO:0140496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gamma-tubulin complex.","definition_xrefs":["PMID:30174135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"gamma-tubulin complex binding","termid":"GO:0140496"}


id: PR:O94552
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fumarate hydratase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04899","PRO:DNx","PANTHER:PTHR11444:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.18c","secondary_identifiers":["UniProtKB:O94552"],"synonyms":[{"name":"Fumarase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FH","type":"exact"}],"termid":"PR:O94552"}


id: PBO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1 (predicted)","termid":"PBO:0001984"}


id: GO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor nuclear translocator activity (obsolete GO:0005061)","synonyms":[{"name":"aryl hydrocarbon receptor nuclear translocator activity","type":"exact"}],"termid":"GO:0005061"}


id: FYPO:0001055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis normally, in that the spindle forms normally and chromosomes condense normally, but then undergoes septation despite abnormal chromosome segregation, giving rise to a cut phenotype.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0000337","FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cut following normal mitotic chromosome condensation","synonyms":[{"name":"cut following normal chromosome condensation during mitotic cell cycle","type":"exact"},{"name":"cut following normal entry into mitosis","type":"related"},{"name":"cut following normal mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"cut following normal mitotic entry","type":"related"},{"name":"cut with normal mitotic chromosome condensation","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation, with normal chromosome condensation","type":"exact"}],"termid":"FYPO:0001055"}


id: PBO:0070133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 47 pseudogene","termid":"PBO:0070133"}


id: GO:0009085
data:
  {"annotated_genes":["SJAG_00881","SJAG_02388","SJAG_01630","SJAG_01955","SJAG_00869","SJAG_00502","SJAG_01574","SJAG_01061","SJAG_03312","SJAG_04688","SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74194,76212,96488,75541,70078,91720,75282,92041,108531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[72981,110806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00502":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01061":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02388":null,"SJAG_03312":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"lysine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5097"],"synonyms":[{"name":"lysine anabolism","type":"exact"},{"name":"lysine biosynthesis","type":"exact"},{"name":"lysine formation","type":"exact"},{"name":"lysine synthesis","type":"exact"}],"termid":"GO:0009085","terms_by_termid":{"GO:0009089":null,"GO:0019878":null}}


id: PBO:0084958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb-related transcription factor; involved in regulating basal and induced expression of genes of the purine and histidine biosynthesis pathways; also involved in regulation of meiotic recombination at specific genes","termid":"PBO:0084958"}


id: PBO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 1","termid":"PBO:0050816"}


id: GO:0007308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis, deposition, and organization of the materials in a cell of an ovary; where the cell can then undergo meiosis and form an ovum. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:dph","GOC:ems","GOC:tb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte construction","secondary_identifiers":["GO:0048110"],"synonyms":[{"name":"oocyte arrangement","type":"exact"}],"termid":"GO:0007308"}


id: PBO:0028296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0028296"}


id: GO:1904362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcitonin secretion.","definition_xrefs":["PMID:11278900","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"calcitonin secretion","termid":"GO:0036161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of calcitonin secretion","termid":"GO:1904362"}


id: GO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastoderm segmentation","termid":"GO:0007350"}


id: SO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000247 mRNA_not_polyadenylated (obsolete SO:0000247)","termid":"SO:0000247"}


id: FYPO:0006336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) occurs to a lesser extent than normal during mitosis.","definition_xrefs":["PMID:8834801","PomBase:mah","GO:0051418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule nucleation during vegetative growth","termid":"FYPO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic microtubule nucleation","synonyms":[{"name":"decreased microtubule nucleation by microtubule organizing center during mitosis","type":"exact"},{"name":"decreased microtubule nucleation during M phase of mitotic cell cycle","type":"related"},{"name":"decreased microtubule nucleation during mitosis","type":"exact"},{"name":"decreased mitotic microtubule nucleation during vegetative growth","type":"exact"},{"name":"reduced mitotic microtubule nucleation","type":"exact"}],"termid":"FYPO:0006336"}


id: PATO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000903 cms-hl type value (obsolete PATO:0000903)","termid":"PATO:0000903"}


id: PBO:0053469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 433","termid":"PBO:0053469"}


id: GO:0098566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the membrane of a transport vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"transport vesicle","termid":"GO:0030133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"transport vesicle lumen","termid":"GO:0098566"}


id: PBO:0041811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARHSP1 divergent transcript","termid":"PBO:0041811"}


id: PBO:0039941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 3B","termid":"PBO:0039941"}


id: GO:0002433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response-regulating cell surface receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.","definition_xrefs":["ISBN:0781735149","GOC:bf","GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway","termid":"GO:0002768"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"immune response-regulating cell surface receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"phagocytosis triggered by activation of immune response cell surface activating receptor","type":"exact"}],"termid":"GO:0002433"}


id: PBO:0087216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine transporter of the mitochondrial inner membrane; member of the mitochondrial carrier family; required for biotin biosynthesis and respiratory growth","termid":"PBO:0087216"}


id: PBO:0048114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 2","termid":"PBO:0048114"}


id: PBO:0042356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD99 molecule like 2","termid":"PBO:0042356"}


id: PR:P50526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ssp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.03","synonyms":[{"name":"Spom972h-ssp1","type":"exact"}],"termid":"PR:P50526"}


id: GO:0001961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a cytokine mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"},{"relation_name":"positively_regulates","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokine-mediated signaling pathway","synonyms":[{"name":"activation of cytokine mediated signaling pathway","type":"narrow"},{"name":"positive regulation of cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"positive regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"positive regulation of cytokine mediated signalling pathway","type":"exact"},{"name":"stimulation of cytokine mediated signaling pathway","type":"narrow"},{"name":"up regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"up-regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"upregulation of cytokine mediated signaling pathway","type":"exact"}],"termid":"GO:0001961"}


id: GO:1903826
data:
  {"annotated_genes":["SJAG_03400","SJAG_02716","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63287,94146],"is_not":false,"summary":null,"term":"GO:1903826"},{"annotations":[99087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane.","definition_xrefs":["GO_REF:0000069","PMID:8195186","GOC:TermGenie","PMID:18357653","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-arginine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015809","GO:1902023","GO:1903400","GO:0043091"],"synonyms":[{"name":"L-arginine import","type":"narrow"},{"name":"L-arginine transport","type":"broad"},{"name":"L-arginine uptake","type":"narrow"},{"name":"arginine transmembrane transport","type":"related"},{"name":"arginine transport","type":"broad"}],"termid":"GO:1903826","terms_by_termid":{"GO:0090518":null,"GO:1903826":null}}


id: PBO:0083685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase, a phosphopyruvate hydratase; catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate; complements the growth defect of an ENO1 ENO2 double mutant","termid":"PBO:0083685"}


id: GO:1990686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-lipid-RNA complex containing separate low-density lipoprotein (LDL), lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["PMID:23559634","GOC:vesicles"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid-RNA complex","termid":"GO:1990684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"LDL-containing protein-lipid-RNA complex","termid":"GO:1990686"}


id: GO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + glycano-(1->3)-(N-acetyl-alpha-D-galactosaminyl)-glycoprotein = CMP + glycano-[(2->6)-alpha-N-acetylneuraminyl]-(N-acetyl-D-galactosaminyl)-glycoprotein.","definition_xrefs":["EC:2.4.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9846305","MetaCyc:2.4.99.3-RXN","Reactome:R-HSA-9603991","Reactome:R-HSA-4084980","RHEA:11136"],"synonyms":[{"name":"GalNAc alpha-2,6-sialyltransferase I activity","type":"related"}],"termid":"GO:0001665"}


id: PBO:0011992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14 (predicted)","termid":"PBO:0011992"}


id: GO:0006119
data:
  {"annotated_genes":["SJAG_MIT04","SJAG_02744","SJAG_MIT09","SJAG_00133","SJAG_00985","SJAG_02105","SJAG_05629","SJAG_03920","SJAG_MIT37","SJAG_MIT20","SJAG_02398","SJAG_MIT13","SJAG_02646","SJAG_00080","SJAG_00438","SJAG_03925","SJAG_00542","SJAG_02598","SJAG_04152","SJAG_MIT03","SJAG_02564","SJAG_00755","SJAG_MIT15","SJAG_00976","SJAG_00260","SJAG_00601","SJAG_00915","SJAG_02504","SJAG_01355","SJAG_00836","SJAG_03114","SJAG_01671","SJAG_03490","SJAG_03337","SJAG_01539","SJAG_07003","SJAG_07007","SJAG_07006","SJAG_01490","SJAG_01077","SJAG_04122","SJAG_01190","SJAG_05204","SJAG_01763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92083],"is_not":false,"summary":null,"term":"GO:0006119"},{"annotations":[113979,73501,113959,109713,109295,71697,75031,110482,83759,103458,114002,84748],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[107945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006120"},{"annotations":[111768,84710,84351,108281],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[75030,108484,99333,112665,103143,85478,110147,113118,74703,113983],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006122"},{"annotations":[113995,88277,88691,110872,84659,113986,100219,89282,102997,103085,103953,97087,90230,98906,98935,98289,113991],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"}]},"cv_name":"biological_process","definition":"The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["ISBN:0471331309","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01539":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02105":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03114":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"oxidative phosphorylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Oxidative_phosphorylation"],"synonyms":[{"name":"respiratory-chain phosphorylation","type":"exact"}],"termid":"GO:0006119","terms_by_termid":{"GO:0006119":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0042776":null}}


id: GO:0045462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the 3-O-acetylation of a trichothecene. Trichothecenes are sesquiterpene epoxide mycotoxins that act as potent inhibitors of eukaryotic protein synthesis.","definition_xrefs":["PMID:10583973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"trichothecene 3-O-acetyltransferase activity","termid":"GO:0045462"}


id: GO:1990532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a nickel ion stimulus.","definition_xrefs":["GOC:kmv","PMID:25330323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress response to metal ion","termid":"GO:0097501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to nickel ion","synonyms":[{"name":"response to nickel ion stress","type":"exact"},{"name":"response to nickel toxicity","type":"exact"},{"name":"stress response to nickel","type":"exact"}],"termid":"GO:1990532"}


id: GO:0004353
data:
  {"annotated_genes":["SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70589","MetaCyc:GLUTAMATE-DEHYDROGENASE-NADP+-RXN","MetaCyc:GLUTAMATE-SYN2-PWY","Reactome:R-HSA-70600"],"synonyms":[{"name":"L-glutamate:NAD(P)+ oxidoreductase (deaminating)","type":"related"},{"name":"glutamate biosynthesis, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamic dehydrogenase activity","type":"broad"}],"termid":"GO:0004353","terms_by_termid":{"GO:0004354":null}}


id: PBO:0083288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant displays shortened telomeres; partially overlaps the uncharacterized ORF YMR031C","termid":"PBO:0083288"}


id: GO:0052194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near symbiont (obsolete GO:0052194)","termid":"GO:0052194"}


id: GO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell. A retinal cone cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:mtg_sensu","PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"},{"relation_name":"part_of","term_name":"retinal cone cell differentiation","termid":"GO:0042670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate commitment","termid":"GO:0046551"}


id: FYPO:0004166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is higher than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased oxygen consumption during vegetative growth","synonyms":[{"name":"increased oxygen consumption during mitotic cell cycle","type":"related"},{"name":"increased oxygen uptake during vegetative growth","type":"related"}],"termid":"FYPO:0004166"}


id: PBO:0085248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, component of a Cdc48p-complex; involved in protein quality control; exhibits cytosolic and ER-membrane localization; contributes to ER-associated degradation (ERAD) of specific substrates at a step after their ubiquitination; translocates to mitochondria under oxidative stress and forms a complex with Cdc48p and Npl4p that is required for ubiquitin-mediated mitochondria-associated protein degradation (MAD)","termid":"PBO:0085248"}


id: PBO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 30","termid":"PBO:0070659"}


id: PBO:0062347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 6","termid":"PBO:0062347"}


id: GO:0033190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of double bonds in prosolanapyrone II to form (-)-solanapyrone A.","definition_xrefs":["PMID:9659400","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"solanapyrone synthase activity","termid":"GO:0033190"}


id: GO:0098606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-Selenocystathionine + H2O => L-Selenocysteine + NH3 + 2-Oxobutanoic acid.","definition_xrefs":["PMID:6456763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"selenocystathionine gamma-lyase activity","secondary_identifiers":["Reactome:R-HSA-2408543","RHEA:31151"],"termid":"GO:0098606"}


id: GO:0005364
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91149],"is_not":false,"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: maltose(out) + H+(out) = maltose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"maltose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen/maltose transporter activity","type":"broad"},{"name":"maltose permease","type":"broad"},{"name":"maltose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0005364","terms_by_termid":{"GO:0005364":null}}


id: PBO:0090514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi calcium and manganese antiporter Gdt1","termid":"PBO:0090514"}


id: FYPO:0002323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-geranylgeranyl diphosphate (GGPP) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular GGPP level","synonyms":[{"name":"decreased cellular 2-trans,6-trans,10-trans-geranylgeranyl diphosphate level","type":"exact"},{"name":"decreased cellular GGPP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular GGPP level during vegetative growth","type":"exact"},{"name":"decreased cellular all-trans-geranylgeranyl diphosphate level","type":"exact"},{"name":"decreased cellular all-trans-geranylgeranyl pyrophosphate level","type":"exact"},{"name":"reduced cellular GGPP level","type":"exact"}],"termid":"FYPO:0002323"}


id: GO:0120210
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Rod telodendria are projections that originate from the rod pedicle and form gap junctions with other photoreceptors within the outer plexiform layer of the retina.","definition_xrefs":["PMID:14755521","GOC:cvs","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telodendria","termid":"GO:0120208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod telodendria","termid":"GO:0120210"}


id: GO:0052368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by organism of cellular component in other organism involved in symbiotic interaction (obsolete GO:0052368)","synonyms":[{"name":"catabolism of cellular component in other organism","type":"exact"},{"name":"catabolism of structural constituent in other organism","type":"exact"},{"name":"degradation of cellular component in other organism","type":"exact"},{"name":"disassembly by organism of cellular component in other organism during symbiotic interaction","type":"related"},{"name":"disassembly by organism of cellular component in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052368"}


id: GO:0031896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V2 vasopressin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"V2 vasopressin receptor binding","synonyms":[{"name":"V2 vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031896"}


id: PBO:0047918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(10)(q21)","termid":"PBO:0047918"}


id: GO:0010936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of macrophage cytokine production","termid":"GO:0010935"},{"relation_name":"negatively_regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage cytokine production","termid":"GO:0010936"}


id: PBO:0053596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 623","termid":"PBO:0053596"}


id: GO:0050119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + H2O = D-glucosamine + acetate.","definition_xrefs":["EC:3.5.1.33","RHEA:20593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0019213","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-acetylglucosamine deacetylase activity","secondary_identifiers":["KEGG_REACTION:R01200","MetaCyc:N-ACETYLGLUCOSAMINE-DEACETYLASE-RXN","Reactome:R-HSA-2022887"],"synonyms":[{"name":"N-acetyl-D-glucosamine amidohydrolase activity","type":"related"},{"name":"N-acetyl-D-glucosaminyl N-deacetylase activity","type":"related"},{"name":"acetylaminodeoxyglucose acetylhydrolase activity","type":"related"}],"termid":"GO:0050119"}


id: FYPO:0005119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a mutation causes a gene product to bind to one or more proteins with different specificity from normal. For example, a protein may bind to a protein in a mutant that it does not bind in wild type. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:25487150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"altered protein binding specificity","synonyms":[{"name":"abnormal protein binding specificity","type":"exact"},{"name":"altered protein-protein interaction specificity","type":"exact"}],"termid":"FYPO:0005119"}


id: PBO:0063165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 9","termid":"PBO:0063165"}


id: PBO:0017784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca1 (predicted)","termid":"PBO:0017784"}


id: PBO:0065047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 1","termid":"PBO:0065047"}


id: GO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding to and activating specific cell surface receptors, thereby inducing behavioral, developmental, or physiological response(s) from a responding organism or cell. The substance may be released or retained on the cell surface. Pheromones may serve as a specific attractant, social communicator, or sexual stimulant.","definition_xrefs":["GOC:sgd_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0140677","GO:0098772","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"pheromone activity","termid":"GO:0005186"}


id: FYECO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manganese chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MnCl2","synonyms":[{"name":"manganese chloride added","type":"exact"}],"termid":"FYECO:0000279"}


id: PBO:0027844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027844"}


id: GO:0100011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that positively_regulates fever generation.","definition_xrefs":["GOC:cjm","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"},{"relation_name":"positively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"positive regulation of fever generation by prostaglandin secretion","termid":"GO:0100011"}


id: PBO:0053609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 642","termid":"PBO:0053609"}


id: GO:0000262
data:
  {"annotated_genes":["SJAG_01262","SJAG_03068","SJAG_03780","SJAG_00611","SJAG_MIT07","SJAG_03906","SJAG_MIT06","SJAG_00153","SJAG_01807","SJAG_MIT05"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84139,94619,98128,98147,101136,103725,107603,113963,113970,113971],"is_not":false,"summary":null,"term":"GO:0000262"}]},"cv_name":"cellular_component","definition":"A chromosome found in the mitochondrion of a eukaryotic cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"mitochondrial nucleoid","termid":"GO:0042645"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01807":null,"SJAG_03068":null,"SJAG_03780":null,"SJAG_03906":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005694","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial chromosome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1186327184"],"synonyms":[{"name":"mitochondrial DNA","type":"narrow"},{"name":"mitochondrial genome","type":"related"},{"name":"mtDNA","type":"narrow"}],"termid":"GO:0000262","terms_by_termid":{"GO:0000262":null}}


id: GO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathway resulting in the formation of butyryl-CoA, starting from acetyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:19539744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"butyryl-CoA biosynthetic process","termid":"GO:0044578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006629","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:0044579"}


id: PBO:0087852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator; binds specific gene recruitment sequences and is required for DNA zip code-mediated targeting of genes to nuclear periphery; regulates proline utilization genes, constitutively binds PUT1 and PUT2 promoters as a dimer, undergoes conformational change to form active state; binds other promoters only under activating conditions; differentially phosphorylated in presence of different nitrogen sources; has a Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0087852"}


id: PBO:0051510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit gamma pseudogene 1","termid":"PBO:0051510"}


id: PATO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001209 absolute function (obsolete PATO:0001209)","termid":"PATO:0001209"}


id: GO:0072500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a ligand-bound hormone receptor acts in the nucleus to stop, prevent, or reduce the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:0072500)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:0072500"}


id: GO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein (sensu Insecta) (obsolete GO:0005188)","synonyms":[{"name":"arylphorin","type":"narrow"},{"name":"larval serum protein (sensu Insecta)","type":"exact"}],"termid":"GO:0005188"}


id: PBO:0071162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 1","termid":"PBO:0071162"}


id: GO:0071592
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69894],"is_not":false,"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinic acid riboside, the product of the formation of a glycosidic bond between ribose and nicotinic acid.","definition_xrefs":["GOC:mah","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside biosynthetic process","termid":"GO:0071589"},{"relation_name":"is_a","term_name":"nicotinic acid riboside metabolic process","termid":"GO:0071591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nicotinic acid riboside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-ribosylnicotinic acid biosynthetic process","type":"exact"},{"name":"nicotinic acid riboside anabolism","type":"exact"},{"name":"nicotinic acid riboside biosynthesis","type":"exact"},{"name":"nicotinic acid riboside formation","type":"exact"},{"name":"nicotinic acid riboside synthesis","type":"exact"}],"termid":"GO:0071592","terms_by_termid":{"GO:0071592":null}}


id: GO:1905695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidic acid biosynthetic process.","definition_xrefs":["GOC:bc","GOC:PARL","PMID:23767959","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of phosphatidic acid biosynthetic process","termid":"GO:1905693"},{"relation_name":"positively_regulates","term_name":"phosphatidic acid biosynthetic process","termid":"GO:0006654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidic acid biosynthetic process","synonyms":[{"name":"activation of phosphatidic acid anabolism","type":"narrow"},{"name":"activation of phosphatidic acid biosynthesis","type":"narrow"},{"name":"activation of phosphatidic acid biosynthetic process","type":"narrow"},{"name":"activation of phosphatidic acid formation","type":"narrow"},{"name":"activation of phosphatidic acid synthesis","type":"narrow"},{"name":"positive regulation of phosphatidic acid anabolism","type":"exact"},{"name":"positive regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidic acid formation","type":"exact"},{"name":"positive regulation of phosphatidic acid synthesis","type":"exact"},{"name":"up regulation of phosphatidic acid anabolism","type":"exact"},{"name":"up regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"up regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidic acid formation","type":"exact"},{"name":"up regulation of phosphatidic acid synthesis","type":"exact"},{"name":"up-regulation of phosphatidic acid anabolism","type":"exact"},{"name":"up-regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidic acid formation","type":"exact"},{"name":"up-regulation of phosphatidic acid synthesis","type":"exact"},{"name":"upregulation of phosphatidic acid anabolism","type":"exact"},{"name":"upregulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"upregulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidic acid formation","type":"exact"},{"name":"upregulation of phosphatidic acid synthesis","type":"exact"}],"termid":"GO:1905695"}


id: PR:P78763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.13 gene.","definition_xrefs":["UniProtKB:P78763","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C83.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.13","synonyms":[{"name":"Spom972h-SPBC83.13","type":"exact"}],"termid":"PR:P78763"}


id: GO:0036257
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73641],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a multivesicular body. A multivesicular body is a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.","definition_xrefs":["GOC:sart","PMID:11566881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multivesicular body organization","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MVB organization","type":"exact"}],"termid":"GO:0036257","terms_by_termid":{"GO:0034496":null}}


id: GO:0047850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + H2O + NADP+ = L-2-amino-6-oxopimelate + H+ + NADPH + NH4.","definition_xrefs":["RHEA:13561","EC:1.4.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"diaminopimelate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02755","MetaCyc:DIAMINOPIMELATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"meso-2,6-diaminoheptanedioate:NADP+ oxidoreductase (deaminating)","type":"related"},{"name":"meso-alpha,epsilon-diaminopimelate dehydrogenase activity","type":"related"},{"name":"meso-diaminopimelate D-dehydrogenase activity","type":"related"},{"name":"meso-diaminopimelate dehydrogenase activity","type":"related"}],"termid":"GO:0047850"}


id: PBO:0091065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom5","termid":"PBO:0091065"}


id: GO:0046416
data:
  {"annotated_genes":["SJAG_02496","SJAG_03288","SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82984],"is_not":false,"summary":null,"term":"GO:0046416"},{"annotations":[109801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046436"},{"annotations":[78616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[77469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[109804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902114"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-amino acids, the D-enantiomers of amino acids.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02496":null,"SJAG_03288":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-amino acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"D-amino acid metabolism","type":"exact"}],"termid":"GO:0046416","terms_by_termid":{"GO:0019478":null,"GO:0036088":null,"GO:0046416":null,"GO:0046436":null,"GO:1902114":null}}


id: PBO:0065265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 25","termid":"PBO:0065265"}


id: PBO:0054992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2406","termid":"PBO:0054992"}


id: PBO:0043820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase O","termid":"PBO:0043820"}


id: PBO:0064633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG coactivator 1 beta","termid":"PBO:0064633"}


id: GO:0080103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylthiopropyl-glucosinolate = 4-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080103"}


id: GO:0070027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of carbon monoxide (CO).","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"carbon monoxide sensor activity","synonyms":[{"name":"carbon monoxide sensing activity","type":"exact"}],"termid":"GO:0070027"}


id: GO:0061676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the importin-alpha family.","definition_xrefs":["PMID:23734157","PMID:15350979","PMID:17170104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"importin-alpha family protein binding","termid":"GO:0061676"}


id: GO:0170046
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95530],"is_not":false,"summary":null,"term":"GO:0170046"}]},"cv_name":"biological_process","definition":"The process in which isopentenyl pyrophosphate is transported across a membrane into the mitochondrion.","definition_xrefs":["PMID:37813972","GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"isopentenyl pyrophosphate import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170046","terms_by_termid":{"GO:0170046":null}}


id: GO:0035267
data:
  {"annotated_genes":["SJAG_04793","SJAG_01385","SJAG_05282","SJAG_03579","SJAG_02990","SJAG_02385","SJAG_01016","SJAG_00187","SJAG_00783","SJAG_03230","SJAG_03792","SJAG_03628","SJAG_04097","SJAG_03145","SJAG_00349","SJAG_04613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71597,72478,73071,73151,76185,77535,86178,87807,89418,99288,99950,102071,104221,108231,110616,113509],"is_not":false,"summary":null,"term":"GO:0035267"}]},"cv_name":"cellular_component","definition":"A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).","definition_xrefs":["GOC:ecd","PMID:10966108","PMID:14966270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4/H2A histone acetyltransferase complex","termid":"GO:0043189"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_02385":null,"SJAG_02990":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04613":null,"SJAG_04793":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TIP60 histone acetylase complex","type":"exact"},{"name":"TIP60 histone acetyltransferase complex","type":"exact"}],"termid":"GO:0035267","terms_by_termid":{"GO:0035267":null}}


id: FYPO:0006052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of lipid droplets to the prospore membrane occurs to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PomBase:mah","PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal lipid droplet localization to prospore membrane leading edge","synonyms":[{"name":"normal lipid droplet localization to FSM leading edge","type":"exact"},{"name":"normal lipid droplet localization to forespore membrane leading edge","type":"exact"},{"name":"normal lipid particle localization to prospore membrane leading edge","type":"exact"}],"termid":"FYPO:0006052"}


id: PBO:0051261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-3 (pseudogene)","termid":"PBO:0051261"}


id: PBO:0045410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 12","termid":"PBO:0045410"}


id: PBO:0027557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_from_RNA_polymerase_II_promoter","termid":"PBO:0027557"}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:dph","GOC:mtg_muscle","GOC:ef","GOC:lm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: GO:0045596
data:
  {"annotated_genes":["SJAG_02169","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[86213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell differentiation","type":"exact"},{"name":"down-regulation of cell differentiation","type":"exact"},{"name":"downregulation of cell differentiation","type":"exact"},{"name":"inhibition of cell differentiation","type":"narrow"}],"termid":"GO:0045596","terms_by_termid":{"GO:0051517":null,"GO:0075297":null}}


id: PBO:0054000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1324","termid":"PBO:0054000"}


id: PATO:0000974
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000974 relative porosity (obsolete PATO:0000974)","termid":"PATO:0000974"}


id: PBO:0047809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box L3","termid":"PBO:0047809"}


id: MOD:01951
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamine residue and an L-serine residue by an ester bond and releasing ammonia to form O-(L-isoglutamyl)-L-serine.","definition_xrefs":["RESID:AA0597#QSX","PubMed:17051152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-serine","termid":"MOD:01977"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-serine (Gln-Ser)","synonyms":[{"name":"(2S)-2-amino-5-[(2S)-2-amino-2-carboxyethoxy]-5-oxopentanoic acid","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)serine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-serine","type":"exact"},{"name":"O3-(isoglutamyl)-serine","type":"exact"}],"termid":"MOD:01951"}


id: MOD:01217
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:12872131","Unimod:285#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), light C12","termid":"MOD:00605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12 - site D","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:01217"}


id: PBO:0110377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 3","termid":"PBO:0110377"}


id: PR:Q09899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A porphobilinogen deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00086","PANTHER:PTHR11557:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphobilinogen deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.13","secondary_identifiers":["UniProtKB:Q09899"],"synonyms":[{"name":"HMBS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PBG (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HMBS","type":"exact"},{"name":"hydroxymethylbilane synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-uroporphyrinogen synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09899"}


id: PBO:0027903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_mitotic_G1_phase","termid":"PBO:0027903"}


id: PBO:0083447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BNA5","termid":"PBO:0083447"}


id: PBO:0091572
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RPB9","termid":"PBO:0091572"}


id: PBO:0090860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion protein for conjugation","termid":"PBO:0090860"}


id: PBO:0010094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP-glucose-1-phosphate uridylyltransferase Fyu1","termid":"PBO:0010094"}


id: GO:0031943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of glucocorticoid metabolic process","synonyms":[{"name":"regulation of glucocorticoid metabolism","type":"exact"}],"termid":"GO:0031943"}


id: PBO:0051162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-43","termid":"PBO:0051162"}


id: PBO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensor for misfolded ER glycoproteins Yos9 (predicted)","termid":"PBO:0000419"}


id: GO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + phthalate = cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylate + NAD+.","definition_xrefs":["RHEA:17489","EC:1.14.12.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phthalate 4,5-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03630","MetaCyc:PHTHALATE-45-DIOXYGENASE-RXN","UM-BBD_reactionID:r0102"],"synonyms":[{"name":"PDO activity","type":"related"},{"name":"phthalate dioxygenase activity","type":"broad"},{"name":"phthalate,NADH:oxygen oxidoreductase (4,5-hydroxylating)","type":"related"}],"termid":"GO:0018620"}


id: FYPO:0001746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biotin import","termid":"FYPO:0001744"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished biotin import","synonyms":[{"name":"abolished biotin import across plasma membrane","type":"exact"},{"name":"abolished biotin import during mitotic cell cycle","type":"related"},{"name":"abolished biotin import during vegetative growth","type":"exact"},{"name":"abolished biotin import into cell","type":"exact"},{"name":"abolished biotin uptake","type":"exact"},{"name":"absent biotin import","type":"exact"},{"name":"biotin import abolished","type":"exact"}],"termid":"FYPO:0001746"}


id: PBO:0034046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_similarity_relationship_with","termid":"PBO:0034046"}


id: PBO:0055234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2661","termid":"PBO:0055234"}


id: PR:O13783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A programmed cell death 6-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting protein bro1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.05c","secondary_identifiers":["UniProtKB:O13783"],"synonyms":[{"name":"BRO domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC17G6.05c","type":"related"},{"name":"Spom972h-PDCD6IP","type":"exact"}],"termid":"PR:O13783"}


id: PBO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 7","termid":"PBO:0070508"}


id: PBO:0081675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 596","termid":"PBO:0081675"}


id: MOD:01298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["PubMed:11910026","PubMed:15133838","Unimod:335#C"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cysteine 4-hydroxynonenal adduct","termid":"MOD:01237"},{"relation_name":"is_a","term_name":"reduced 4-hydroxynonenal adduct","termid":"MOD:00642"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:01298"}


id: FYPO:0003727
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114325],"is_not":false,"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein in the cell wall does not contain galactose residues. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:9125114","PMID:11378902","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"},{"relation_name":"is_a","term_name":"galactose absent from glycoprotein glycan","termid":"FYPO:0003291"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0003290","FYPO:0005447","FYPO:0001985","FYPO:0002946","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"galactose absent from cell wall glycoprotein glycan","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abolished galactosylation of cell surface proteins","type":"related"},{"name":"alpha 1,2-linked galactose residues absent from cell wall glycoprotein","type":"exact"},{"name":"galactose absent from cell wall glycoprotein oligosaccharide","type":"related"},{"name":"galactose absent from glycoprotein glycan in cell wall","type":"exact"}],"termid":"FYPO:0003727","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0058886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10523","termid":"PBO:0058886"}


id: GO:0050259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ + ribofuranose = D-ribonate + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.115","RHEA:11676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01079","MetaCyc:RIBOSE-1-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"D-ribose dehydrogenase (NADP+)","type":"related"},{"name":"D-ribose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-pentose-dehydrogenase activity","type":"related"}],"termid":"GO:0050259"}


id: PBO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 3 pseudogene","termid":"PBO:0061915"}


id: GO:1900376
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900376","terms_by_termid":{"GO:1905569":null}}


id: GO:0009463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Diheme cytochrome b; cytochrome b has the hemes b(562) and b(566) and is a component of the mitochondrial respiratory chain complex III. Cytochrome b6 is a component of bc complex acting between photosystems II and I of photosynthesis.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b/b6 (obsolete GO:0009463)","synonyms":[{"name":"cytochrome b/b6","type":"exact"}],"termid":"GO:0009463"}


id: GO:0019928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an aspartic acid residue to form 3-(S-L-cysteinyl)-L-aspartic acid.","definition_xrefs":["PDB:1JJU","RESID:AA0314","PMID:11555656","PMID:11717396"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3-(S-L-cysteinyl)-L-aspartic acid (obsolete GO:0019928)","termid":"GO:0019928"}


id: PBO:0063588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 3","termid":"PBO:0063588"}


id: GO:0071479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ionizing radiation","termid":"GO:0010212"},{"relation_name":"is_a","term_name":"cellular response to radiation","termid":"GO:0071478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ionizing radiation","synonyms":[{"name":"cellular response to ionising radiation","type":"exact"},{"name":"cellular response to ionizing radiation stimulus","type":"exact"}],"termid":"GO:0071479"}


id: PBO:0073827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 5 pseudogene 1","termid":"PBO:0073827"}


id: GO:1900789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pseurotin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"pseurotin A catabolic process","synonyms":[{"name":"Pseurotin breakdown","type":"related"},{"name":"Pseurotin catabolic process","type":"related"},{"name":"Pseurotin catabolism","type":"related"},{"name":"Pseurotin degradation","type":"related"},{"name":"pseurotin A breakdown","type":"exact"},{"name":"pseurotin A catabolism","type":"exact"},{"name":"pseurotin A degradation","type":"exact"}],"termid":"GO:1900789"}


id: GO:0048388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the pH of the endosomal lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH reduction","termid":"GO:0051452"},{"relation_name":"part_of","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosomal lumen acidification","termid":"GO:0048388"}


id: PATO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's consisting a knot-like mass.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular","termid":"PATO:0002125"}


id: PBO:0093832
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_locus","termid":"PBO:0093832"}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: GO:0009334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Enzyme complex consisting of four proteins: the two subunits of the hydroxylase component (hcaE and hcaF), a ferredoxin (hcaC) and a ferredoxin reductase (hcaD). Converts 3-phenylpropionic acid (PP) into cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol).","definition_xrefs":["MetaCyc:HCAMULTI-CPLX","GOC:jl","PMID:9603882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"3-phenylpropionate dioxygenase complex","termid":"GO:0009334"}


id: PBO:0064470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon, catalytic subunit","termid":"PBO:0064470"}


id: PATO:0002016
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnitude","termid":"PATO:0002016"}


id: GO:0033939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-D-(1->2)-(4-O-methyl)glucuronosyl links in the main chain of hardwood xylans.","definition_xrefs":["EC:3.2.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"xylan alpha-1,2-glucuronosidase activity","secondary_identifiers":["MetaCyc:3.2.1.131-RXN"],"synonyms":[{"name":"1,2-alpha-glucuronidase activity","type":"related"},{"name":"alpha-(1->2)-glucuronidase activity","type":"related"},{"name":"xylan alpha-D-1,2-(4-O-methyl)glucuronohydrolase activity","type":"related"}],"termid":"GO:0033939"}


id: PBO:0082012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 9","termid":"PBO:0082012"}


id: PBO:0039483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A6, pseudogene","termid":"PBO:0039483"}


id: GO:0050413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + D-alanine + H2O = (6S)-5,6,7,8-tetrahydrofolate + 2-methylserine.","definition_xrefs":["EC:2.1.2.7","RHEA:10064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-alanine 2-hydroxymethyltransferase activity","secondary_identifiers":["MetaCyc:D-ALANINE-HYDROXYMETHYLTRANSFERASE-RXN","KEGG_REACTION:R01225"],"synonyms":[{"name":"2-methylserine hydroxymethyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:D-alanine 2-hydroxymethyltransferase activity","type":"related"},{"name":"D-alanine hydroxymethyltransferase activity","type":"exact"}],"termid":"GO:0050413"}


id: GO:0120085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transposon integration that contributes to a process of RNA-mediated transposition.","definition_xrefs":["GOC:mah","PMID:26358720"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration involved in RNA-mediated transposition (obsolete GO:0120085)","synonyms":[{"name":"retrotransposon integration","type":"exact"}],"termid":"GO:0120085"}


id: GO:0046818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A location in the host cell nucleus where viral proteins colocalize late in infection prior to the onset of viral DNA synthesis. More than one site can be present simultaneously.","definition_xrefs":["PMID:10233976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"dense nuclear body","termid":"GO:0046818"}


id: GO:1990526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that is involved in the transcription regulation of mating genes in the yeast S. cerevisiae.","definition_xrefs":["GOC:rb","PMID:16782869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Ste12p-Dig1p-Dig2p complex","termid":"GO:1990526"}


id: GO:0050433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of catecholamines.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine secretion","termid":"GO:0050433"}


id: GO:0035931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any mineralocorticoid into the circulatory system. Mineralocorticoids are a class of steroid hormones that regulate water and electrolyte metabolism.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mineralocorticoid secretion","termid":"GO:0035931"}


id: GO:0042080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI/GSI anchor biosynthetic process (obsolete GO:0042080)","synonyms":[{"name":"GPI/GSI anchor anabolism","type":"exact"},{"name":"GPI/GSI anchor biosynthesis","type":"exact"},{"name":"GPI/GSI anchor biosynthetic process","type":"exact"},{"name":"GPI/GSI anchor formation","type":"exact"},{"name":"GPI/GSI anchor synthesis","type":"exact"}],"termid":"GO:0042080"}


id: PBO:0041358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 1","termid":"PBO:0041358"}


id: PBO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone)(predicted)","termid":"PBO:0015666"}


id: GO:0141132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a host that act to protect or prevent damage to the symbiont.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to host","secondary_identifiers":["GO:0052264","GO:0052348","GO:0052369"],"termid":"GO:0141132"}


id: GO:0090253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the wing epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090253"}


id: GO:0033422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"CCC codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033422"}


id: PBO:0049883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 2","termid":"PBO:0049883"}


id: PBO:0038353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stem_parasite_of","termid":"PBO:0038353"}


id: GO:1903044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a membrane raft.","definition_xrefs":["GOC:TermGenie","PMID:19414744","GOC:dl","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to membrane raft","synonyms":[{"name":"protein localisation in membrane raft","type":"exact"},{"name":"protein localisation to membrane raft","type":"exact"},{"name":"protein localization in membrane raft","type":"exact"}],"termid":"GO:1903044"}


id: PR:Q9P6N8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX47 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01084","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent rRNA helicase rrp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.08c","secondary_identifiers":["UniProtKB:Q9P6N8"],"synonyms":[{"name":"Spom972h-DDX47","type":"exact"}],"termid":"PR:Q9P6N8"}


id: GO:0032783
data:
  {"annotated_genes":["SJAG_02238","SJAG_02393","SJAG_03481"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95219,108270,109143],"is_not":false,"summary":null,"term":"GO:0032783"}]},"cv_name":"cellular_component","definition":"A transcription elongation factor complex that increases the overall rate of RNA polymerase II transcription elongation by suppressing transient polymerase pausing. At minimum, the complex contains a transcription factor of the ELL family, an EAF protein, and an AFF family protein or distant relative and most likely also P-TEFb and AF9 or ENL. The complex is conserved from yeast to humans. In Schizosaccharomyces pombe it contains Ell1, Eaf1, and Ebp1, but it is absent from S. cerevisiae.","definition_xrefs":["PMID:17150956","PMID:30102332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02238":null,"SJAG_02393":null,"SJAG_03481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"super elongation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ELL-EAF complex","type":"narrow"},{"name":"ELL-EAF-EBP complex","type":"narrow"}],"termid":"GO:0032783","terms_by_termid":{"GO:0032783":null}}


id: PBO:0017722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoadipate and 2-oxoglutarate transmembrane transporter (predicted)","termid":"PBO:0017722"}


id: PBO:0044746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 24","termid":"PBO:0044746"}


id: PBO:0087327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorbitol dehydrogenase; protein sequence is 99% identical to the Sor2p sorbitol dehydrogenase; expression is induced in the presence of sorbitol or xylose","termid":"PBO:0087327"}


id: PR:O74823
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- red5 gene.","definition_xrefs":["UniProtKB:O74823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH domain-containing protein C337.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.12","synonyms":[{"name":"Spom972h-red5","type":"exact"}],"termid":"PR:O74823"}


id: GO:1905201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of gibberellin from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GO_REF:0000070","PMID:27139299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"gibberellin transmembrane transporter activity","termid":"GO:1905201"}


id: PBO:0084963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myosin-like protein associated with the nuclear envelope; nuclear basket protein that connects the nuclear pore complex with the nuclear interior; involved with Tel1p in telomere length control; involved with Pml1p and Pml39p in nuclear retention of unspliced mRNAs; MLP1 has a paralog, MLP2, that arose from the whole genome duplication","termid":"PBO:0084963"}


id: FYPO:0004259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah","GO:0007095","PMID:21098122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abolished G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004259"}


id: PR:P50998
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ada1 gene.","definition_xrefs":["UniProtKB:P50998","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.04","synonyms":[{"name":"Spom972h-ada1","type":"exact"},{"name":"myoadenylate deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50998"}


id: PBO:0051882
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-3-phosphate synthase 1","termid":"PBO:0051882"}


id: SO:0000335
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mRNA with a minus 2 frameshift.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"minus_2_frameshift","termid":"SO:0000867"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_minus_2_frameshift","synonyms":[{"name":"mRNA with minus 2 frameshift","type":"exact"}],"termid":"SO:0000335"}


id: GO:0021990
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["PMID:15806586","ISBN:0878932437","GO_REF:0000021","GOC:cls","ISBN:0878932585","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate morphogenesis","termid":"GO:0001839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate formation","termid":"GO:0021990"}


id: PBO:0006212
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  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assigned_by","termid":"PBO:0006212"}


id: FYPO:0006159
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to linear element","termid":"FYPO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to linear element","synonyms":[{"name":"increased protein localisation to linear element","type":"exact"}],"termid":"FYPO:0006159"}


id: GO:0004099
data:
  {"annotated_genes":["SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87217],"is_not":false,"summary":null,"term":"GO:0004099"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chitin + H2O = chitosan + acetate.","definition_xrefs":["EC:3.5.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"chitin deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CHITIN-DEACETYLASE-RXN","RHEA:10464"],"synonyms":[{"name":"chitin amidohydrolase activity","type":"related"}],"termid":"GO:0004099","terms_by_termid":{"GO:0004099":null}}


id: PBO:0089038
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1","termid":"PBO:0089038"}


id: GO:0005587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes.","definition_xrefs":["PMID:21421911","ISBN:0721639976","PMID:19693541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"network-forming collagen trimer","termid":"GO:0098642"},{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type IV trimer","secondary_identifiers":["Wikipedia:Collagen_type_IV"],"termid":"GO:0005587"}


id: PBO:0066966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 268","termid":"PBO:0066966"}


id: GO:0016616
data:
  {"annotated_genes":["SJAG_03804","SJAG_02176","SJAG_03198","SJAG_04376","SJAG_03562","SJAG_00409","SJAG_01036","SJAG_02963","SJAG_01457","SJAG_03958","SJAG_00237","SJAG_00242","SJAG_03715","SJAG_02148","SJAG_02297","SJAG_04362","SJAG_01432","SJAG_01753","SJAG_00502","SJAG_02960","SJAG_02855","SJAG_03822","SJAG_00337","SJAG_03821","SJAG_01012","SJAG_01137","SJAG_00593","SJAG_03852","SJAG_00038","SJAG_00491","SJAG_03098","SJAG_01414","SJAG_01543","SJAG_00630","SJAG_03196","SJAG_00396","SJAG_04048","SJAG_03152","SJAG_02488","SJAG_02313","SJAG_04660","SJAG_03370","SJAG_00281","SJAG_02696","SJAG_00240","SJAG_03235","SJAG_02010","SJAG_01298","SJAG_01986","SJAG_04972","SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70355,99185],"is_not":false,"summary":null,"term":"GO:0016616"},{"annotations":[89447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102566"},{"annotations":[105221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003854"},{"annotations":[72427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047560"},{"annotations":[73906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003862"},{"annotations":[70760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000253"},{"annotations":[92528,93029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004316"},{"annotations":[105222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103066"},{"annotations":[105223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103067"},{"annotations":[101980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008703"},{"annotations":[71268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000140"},{"annotations":[100268,71742,109675,70976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004022"},{"annotations":[76296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008106"},{"annotations":[76724,94053,94054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004024"},{"annotations":[87258,73356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004032"},{"annotations":[75001,72420,77132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004033"},{"annotations":[105224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000252"},{"annotations":[78651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008720"},{"annotations":[91133,96467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[100262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"},{"annotations":[113395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"},{"annotations":[92343,113396,92254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004345"},{"annotations":[84156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008888"},{"annotations":[89392,101701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047952"},{"annotations":[74321,74395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030267"},{"annotations":[78634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004399"},{"annotations":[70560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047046"},{"annotations":[70937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004412"},{"annotations":[109959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004420"},{"annotations":[74322,74396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016618"},{"annotations":[73998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003938"},{"annotations":[87261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047018"},{"annotations":[87262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047019"},{"annotations":[70556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004449"},{"annotations":[73148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004450"},{"annotations":[75946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004455"},{"annotations":[91134,96468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"},{"annotations":[72479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003939"},{"annotations":[73340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030060"},{"annotations":[72650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"},{"annotations":[100259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043892"},{"annotations":[78677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004616"},{"annotations":[111917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004617"},{"annotations":[109459],"is_not":false,"rel_names":["is_a"],"su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of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.","definition_xrefs":["EC:1.1.1.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of 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id: GO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.","definition_xrefs":["CL:0000540","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration","secondary_identifiers":["Wikipedia:Neural_development#Neuron_migration","Wikipedia:Neuron_migration"],"synonyms":[{"name":"neuron chemotaxis","type":"exact"},{"name":"neuron guidance","type":"related"},{"name":"neuronal migration","type":"exact"}],"termid":"GO:0001764"}


id: PBO:0051875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 2","termid":"PBO:0051875"}


id: SO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydrophobic regions are regions with a low affinity for water.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"hydrophobic_region_of_peptide","synonyms":[{"name":"hydropathic","type":"related"},{"name":"hydrophobic region of peptide","type":"related"},{"name":"hydrophobic_region","type":"exact"},{"name":"hydrophobicity","type":"related"}],"termid":"SO:0100013"}


id: PBO:0090497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp6","termid":"PBO:0090497"}


id: MOD:00735
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosuronic acid group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"hexosuronylated","synonyms":[{"name":"HexA","type":"exact"}],"termid":"MOD:00735"}


id: PBO:0045340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine hydroxylase","termid":"PBO:0045340"}


id: PBO:0060351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVIIIA","termid":"PBO:0060351"}


id: PBO:0042299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8 subunit alpha","termid":"PBO:0042299"}


id: PBO:0050961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 3 pseudogene 1","termid":"PBO:0050961"}


id: PBO:0049442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 19","termid":"PBO:0049442"}


id: FYPO:0000810
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114199,114269,114201,114194],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[114343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[114123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003973"},{"annotations":[114270,114026,114212,114219,114218,114211,114025,114033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[114272,114280,114288,114273,114285,114276],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[114337],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleus organization is abnormal. 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id: PBO:0066204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 18","termid":"PBO:0066204"}


id: GO:1900158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bone mineralization","termid":"GO:0030502"},{"relation_name":"is_a","term_name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"},{"relation_name":"negatively_regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization involved in bone maturation","synonyms":[{"name":"down regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"down-regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"downregulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"inhibition of bone mineralization involved in bone maturation","type":"narrow"}],"termid":"GO:1900158"}


id: PBO:0029967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_gamma_radiation","termid":"PBO:0029967"}


id: PBO:0054719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2128","termid":"PBO:0054719"}


id: GO:0098895
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"postsynaptic endosome membrane","termid":"GO:0098895"}


id: FYPO:0001067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of tyrosine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal tyrosine import","synonyms":[{"name":"abnormal L-tyrosine import","type":"exact"},{"name":"abnormal L-tyrosine import across plasma membrane","type":"exact"},{"name":"abnormal tyrosine import during mitotic cell cycle","type":"related"},{"name":"abnormal tyrosine import during vegetative growth","type":"exact"},{"name":"abnormal tyrosine import into cell","type":"exact"},{"name":"abnormal tyrosine uptake","type":"exact"}],"termid":"FYPO:0001067"}


id: PBO:0042455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 small effector 1","termid":"PBO:0042455"}


id: PBO:0031361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_thiabendazole","termid":"PBO:0031361"}


id: GO:0071952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of O-phosphoserine charged on a tRNA(Cys) to cysteinyl-tRNA.","definition_xrefs":["GOC:jsg","PMID:18559341","PMID:17351629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA","termid":"GO:0071952"}


id: GO:0043068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of programmed cell death","secondary_identifiers":["GO:0043071"],"synonyms":[{"name":"activation of programmed cell death","type":"narrow"},{"name":"positive regulation of non-apoptotic programmed cell death","type":"narrow"},{"name":"stimulation of programmed cell death","type":"narrow"},{"name":"up regulation of programmed cell death","type":"exact"},{"name":"up-regulation of programmed cell death","type":"exact"},{"name":"upregulation of programmed cell death","type":"exact"}],"termid":"GO:0043068"}


id: PBO:0026972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026972"}


id: GO:0010362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which blue light stops, prevents, or reduces the frequency, rate, or extent of the anion channel activity.","definition_xrefs":["PMID:17319842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of anion channel activity","termid":"GO:0010360"},{"relation_name":"is_a","term_name":"regulation of anion channel activity by blue light","termid":"GO:0010361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of anion channel activity by blue light","synonyms":[{"name":"inhibition by blue light of anion channel activity","type":"narrow"},{"name":"negative regulation by blue light of anion channel activity","type":"exact"}],"termid":"GO:0010362"}


id: GO:0047254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one + UDP-D-glucose = 2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.202","MetaCyc:2.4.1.202-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7022","RHEA:15541"],"synonyms":[{"name":"UDP-glucose:2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-glucosyltransferase activity","type":"related"}],"termid":"GO:0047254"}


id: FYPO:0000998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during nitrogen starvation","synonyms":[{"name":"cell morphology, elongated cell during nitrogen starvation","type":"exact"},{"name":"elongated cell during nitrogen depletion","type":"exact"},{"name":"elongated cell during nitrogen deprivation","type":"exact"},{"name":"gain of polarization during quiescence","type":"related"},{"name":"long cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0000998"}


id: GO:0048877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in the retina.","definition_xrefs":["GOC:tb","GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"},{"relation_name":"is_a","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of retina cells","termid":"GO:0048877"}


id: FYECO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which FITC-conjugated lectin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000163 FITC-conjugated lectin added (obsolete FYECO:0000163)","termid":"FYECO:0000163"}


id: GO:1900976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tatiopterin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of tatiopterin biosynthetic process","termid":"GO:1900974"},{"relation_name":"is_a","term_name":"positive regulation of tatiopterin metabolic process","termid":"GO:1900979"},{"relation_name":"positively_regulates","term_name":"tatiopterin biosynthetic process","termid":"GO:1900870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0042559","GO:0044281"],"is_obsolete":false,"name":"positive regulation of tatiopterin biosynthetic process","synonyms":[{"name":"activation of tatiopterin anabolism","type":"exact"},{"name":"activation of tatiopterin biosynthesis","type":"exact"},{"name":"activation of tatiopterin biosynthetic process","type":"narrow"},{"name":"activation of tatiopterin formation","type":"exact"},{"name":"activation of tatiopterin synthesis","type":"exact"},{"name":"positive regulation of tatiopterin anabolism","type":"exact"},{"name":"positive regulation of tatiopterin biosynthesis","type":"exact"},{"name":"positive regulation of tatiopterin formation","type":"exact"},{"name":"positive regulation of tatiopterin synthesis","type":"exact"},{"name":"up regulation of tatiopterin anabolism","type":"exact"},{"name":"up regulation of tatiopterin biosynthesis","type":"exact"},{"name":"up regulation of tatiopterin biosynthetic process","type":"exact"},{"name":"up regulation of tatiopterin formation","type":"exact"},{"name":"up regulation of tatiopterin synthesis","type":"exact"},{"name":"up-regulation of tatiopterin anabolism","type":"exact"},{"name":"up-regulation of tatiopterin biosynthesis","type":"exact"},{"name":"up-regulation of tatiopterin biosynthetic process","type":"exact"},{"name":"up-regulation of tatiopterin formation","type":"exact"},{"name":"up-regulation of tatiopterin synthesis","type":"exact"},{"name":"upregulation of tatiopterin anabolism","type":"exact"},{"name":"upregulation of tatiopterin biosynthesis","type":"exact"},{"name":"upregulation of tatiopterin biosynthetic process","type":"exact"},{"name":"upregulation of tatiopterin formation","type":"exact"},{"name":"upregulation of tatiopterin synthesis","type":"exact"}],"termid":"GO:1900976"}


id: PBO:0057429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-2","termid":"PBO:0057429"}


id: GO:0016028
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized microvilli-containing organelle on the apical surfaces of a photoreceptor cell containing the visual pigment rhodopsin and most of the proteins involved in phototransduction.","definition_xrefs":["GOC:hb","GOC:sart","PMID:8646774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhabdomere","termid":"GO:0016028"}


id: GO:0061609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose-1-phosphate = dihydroxyacetone phosphate + D-glyceraldehyde.","definition_xrefs":["GOC:dph","ISBN:0201090910","RHEA:30851","GOC:glycolysis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"fructose-1-phosphate aldolase activity","secondary_identifiers":["Reactome:R-HSA-5656438","Reactome:R-HSA-70342"],"termid":"GO:0061609"}


id: GO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricoumaroyl spermidine + NADPH + O2 = dicoumaroyl monocaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tricoumaroylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11260"],"synonyms":[{"name":"tricoumaroyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072547"}


id: GO:0021506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neuropore closure","termid":"GO:0021506"}


id: GO:0009824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + dimethylallyl diphosphate = N(6)-(dimethylallyl)adenosine 5'-phosphate + diphosphate.","definition_xrefs":["RHEA:15285","EC:2.5.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"AMP dimethylallyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04038","MetaCyc:RXN-4307"],"synonyms":[{"name":"2-isopentenyl-diphosphate:AMP 2-isopentenyltransferase activity","type":"exact"},{"name":"2-isopentenyl-diphosphate:AMP delta2-isopentenyltransferase activity","type":"exact"},{"name":"adenylate dimethylallyltransferase activity","type":"related"},{"name":"adenylate isopentenyltransferase activity","type":"exact"},{"name":"cytokinin synthase activity","type":"related"},{"name":"dimethylallyl-diphosphate:AMP dimethylallyltransferase activity","type":"related"},{"name":"isopentenyltransferase activity","type":"broad"}],"termid":"GO:0009824"}


id: GO:0102461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + UDP-L-rhamnose = kaempferol 3-O-rhamnosyl(1->2)glucoside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"kaempferol 3-sophoroside 7-O-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14009"],"termid":"GO:0102461"}


id: PBO:0028692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_doxorubicin","termid":"PBO:0028692"}


id: GO:0047716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1H-imidazole + acetyl-CoA = N-acetylimidazole + CoA.","definition_xrefs":["EC:2.3.1.2","RHEA:15813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"imidazole N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03621","MetaCyc:IMIDAZOLE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:imidazole N-acetyltransferase activity","type":"related"},{"name":"imidazole acetylase activity","type":"related"},{"name":"imidazole acetyltransferase activity","type":"related"}],"termid":"GO:0047716"}


id: PBO:0049154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1B","termid":"PBO:0049154"}


id: PBO:0017888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer alpha subunit Cop1 (predicted)","termid":"PBO:0017888"}


id: PBO:0057484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 602","termid":"PBO:0057484"}


id: GO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar part (obsolete GO:0044452)","synonyms":[{"name":"nucleolus component","type":"exact"}],"termid":"GO:0044452"}


id: GO:0015104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of antimonite from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"antimonite transmembrane transporter activity","termid":"GO:0015104"}


id: PBO:0051626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILRUN antisense RNA 1","termid":"PBO:0051626"}


id: PBO:0057117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR202 host gene","termid":"PBO:0057117"}


id: FYPO:0003123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is abolished during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nuclear periphery","termid":"FYPO:0002568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nuclear periphery during cellular response to heat","synonyms":[{"name":"abolished protein localisation to nuclear periphery during cellular response to heat","type":"exact"},{"name":"abolished protein localization to nuclear periphery during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear periphery during cellular response to heat during vegetative growth","type":"exact"},{"name":"protein localization to nuclear periphery abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0003123"}


id: GO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase V transcription repressor complex","termid":"GO:0090574"}


id: PBO:0109614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitic acid regulated anti-inflammatory lncRNA","termid":"PBO:0109614"}


id: PR:O36025
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain-containing protein mpd2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.13c","synonyms":[{"name":"Spom972h-mpd2","type":"exact"}],"termid":"PR:O36025"}


id: PBO:0045376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate mannosyltransferase subunit 2, regulatory","termid":"PBO:0045376"}


id: FYPO:0004590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the gamma-tubulin complex to the spindle pole body takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis","synonyms":[{"name":"abnormal gamma-tubulin complex localisation to mitotic spindle pole body following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic SPB following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and interphase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to spindle pole body following normal nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004590"}


id: GO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of an egg coat, a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["PMID:17163408","GOC:sart","PMID:16944418","GOC:bf","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg coat formation","synonyms":[{"name":"VE formation","type":"narrow"},{"name":"ZP assembly","type":"narrow"},{"name":"vitelline envelope formation","type":"narrow"},{"name":"zona pellucida assembly","type":"narrow"}],"termid":"GO:0035803"}


id: PR:O74910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- raf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1-associated factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.12c","synonyms":[{"name":"De-localization of swi6 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-raf1","type":"exact"},{"name":"cryptic loci regulator 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74910"}


id: PBO:0080550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 9","termid":"PBO:0080550"}


id: PBO:0090894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Rho1 Rgf2","termid":"PBO:0090894"}


id: PR:O13686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 59 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RWD, RING finger and WD repeat-containing protein C11E3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.05","secondary_identifiers":["UniProtKB:O13686"],"synonyms":[{"name":"Spom972h-WDR59","type":"exact"}],"termid":"PR:O13686"}


id: SO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region that includes DNAse hypersensitive sites located near a gene that confers the high-level, position-independent, and copy number-dependent expression to that gene.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locus_control_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Locus_control_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:locus_control_region","type":"exact"},{"name":"LCR","type":"exact"},{"name":"locus control element","type":"related"},{"name":"locus control region","type":"exact"}],"termid":"SO:0000037"}


id: GO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction dependent upon an immune response, typically a response by a mature T or B cell in the periphery resulting tolerance towards an antigen via induction of anergy, cellular deletion, or regulatory T cell activation.","definition_xrefs":["GO_REF:0000022","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction dependent upon immune response","synonyms":[{"name":"immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002461"}


id: GO:0070858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"negative regulation of bile acid metabolic process","termid":"GO:1904252"},{"relation_name":"negatively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of bile acid biosynthetic process","synonyms":[{"name":"down regulation of bile acid biosynthetic process","type":"exact"},{"name":"down-regulation of bile acid biosynthetic process","type":"exact"},{"name":"downregulation of bile acid biosynthetic process","type":"exact"},{"name":"inhibition of bile acid biosynthetic process","type":"narrow"},{"name":"negative regulation of bile acid anabolism","type":"exact"},{"name":"negative regulation of bile acid biosynthesis","type":"exact"},{"name":"negative regulation of bile acid formation","type":"exact"},{"name":"negative regulation of bile acid synthesis","type":"exact"}],"termid":"GO:0070858"}


id: GO:0099511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Regulation of cytosolic calcium ion concentrations via the directed movement of calcium ions across the plasma-membrane into the cytosol via the action of a voltage-gated calcium ion channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in regulation of cytosolic calcium levels","termid":"GO:0099511"}


id: FYPO:0003850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an oligomycin antibiotic.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on oligomycin","synonyms":[{"name":"normal cell population growth in presence of oligomycin","type":"exact"},{"name":"normal cell population growth on oligomycin","type":"exact"},{"name":"normal cellular response to oligomycin","type":"related"},{"name":"normal vegetative cell population growth on oligomycin","type":"exact"}],"termid":"FYPO:0003850"}


id: PBO:0078191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-1","termid":"PBO:0078191"}


id: PBO:0091058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog Lvs1","termid":"PBO:0091058"}


id: PBO:0029568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_small_vegetative_cell_population_(obsolete_FYPO:0002153)","termid":"PBO:0029568"}


id: PBO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amitrole","termid":"PBO:0030706"}


id: GO:0045572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of imaginal disc growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc growth","termid":"GO:0045570"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"positively_regulates","term_name":"imaginal disc growth","termid":"GO:0007446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of imaginal disc growth","synonyms":[{"name":"activation of imaginal disc growth","type":"narrow"},{"name":"stimulation of imaginal disc growth","type":"narrow"},{"name":"up regulation of imaginal disc growth","type":"exact"},{"name":"up-regulation of imaginal disc growth","type":"exact"},{"name":"upregulation of imaginal disc growth","type":"exact"}],"termid":"GO:0045572"}


id: GO:0102543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epsilon-rhodomycinone + H2O = 15-demethoxy-epsilon-rhodomycinone + methanol + H+.","definition_xrefs":["EC:3.1.1.95","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"epsilon-rhodomycinone methylesterase activity","secondary_identifiers":["MetaCyc:RXN-14865"],"termid":"GO:0102543"}


id: GO:0016279
data:
  {"annotated_genes":["SJAG_02868","SJAG_04159","SJAG_01536","SJAG_03869","SJAG_01425","SJAG_01079","SJAG_02873","SJAG_04574","SJAG_01482","SJAG_01193","SJAG_01146","SJAG_02692","SJAG_03228","SJAG_01054","SJAG_00769","SJAG_03630","SJAG_03487"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70062,71750,73031,74162,74842,76392,77075,77185,83229,110458,111833,112163],"is_not":false,"summary":null,"term":"GO:0016279"},{"annotations":[90864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[90865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[111518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[111560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[105619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[105620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[105621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[112022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue in a protein substrate.","definition_xrefs":["PMID:12054878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"lysine N-methyltransferase activity","termid":"GO:0016278"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01054":null,"SJAG_01079":null,"SJAG_01146":null,"SJAG_01193":null,"SJAG_01425":null,"SJAG_01482":null,"SJAG_01536":null,"SJAG_02692":null,"SJAG_02868":null,"SJAG_02873":null,"SJAG_03228":null,"SJAG_03487":null,"SJAG_03630":null,"SJAG_03869":null,"SJAG_04159":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0008276","GO:0016740","GO:0003674","GO:0140096","GO:0016741"],"is_obsolete":false,"name":"protein-lysine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8932275","Reactome:R-HSA-8932243","RHEA:51736","Reactome:R-HSA-212263","Reactome:R-HSA-8865237","Reactome:R-HSA-8931974","Reactome:R-HSA-8931858","Reactome:R-HSA-8932221","Reactome:R-HSA-8932276","Reactome:R-HSA-8932413"],"synonyms":[{"name":"protein (lysine) methyltransferase activity","type":"exact"},{"name":"protein lysine methylase activity","type":"exact"}],"termid":"GO:0016279","terms_by_termid":{"GO:0016279":null,"GO:0062122":null,"GO:0140943":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null}}


id: PBO:0082861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm B; part of heteroheptameric complex (with Smd1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm B and Sm B'","termid":"PBO:0082861"}


id: GO:1903667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["PMID:22711818","GO_REF:0000059","GOC:TermGenie","PMID:24390142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of negative chemotaxis","termid":"GO:0050923"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of chemorepellent activity","synonyms":[{"name":"regulation of chemorepellant activity","type":"exact"}],"termid":"GO:1903667"}


id: PBO:0011112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA Omt3","termid":"PBO:0011112"}


id: PBO:0070222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 155 pseudogene","termid":"PBO:0070222"}


id: PBO:0069832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1118, pseudogene","termid":"PBO:0069832"}


id: PBO:0053584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 607","termid":"PBO:0053584"}


id: MOD:01136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate","termid":"MOD:01136"}


id: PBO:0065365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin and Sec7 domain containing","termid":"PBO:0065365"}


id: PBO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3","termid":"PBO:0004728"}


id: GO:0045180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane on the basal edge of a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"basal cortex","termid":"GO:0045180"}


id: PBO:0034093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_Ib_bouton","termid":"PBO:0034093"}


id: GO:0060961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of phospholipase D.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase inhibitor activity","termid":"GO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0030234","GO:0004857","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"phospholipase D inhibitor activity","termid":"GO:0060961"}


id: GO:0033766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + quinolin-2-ol = H2O + NAD+ + quinoline-2,8-diol.","definition_xrefs":["RHEA:22080","EC:1.14.13.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyquinoline 8-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05158","MetaCyc:1.14.13.61-RXN"],"synonyms":[{"name":"2-oxo-1,2-dihydroquinoline 8-monooxygenase activity","type":"related"},{"name":"quinolin-2(1H)-one,NADH:oxygen oxidoreductase (8-oxygenating) activity","type":"related"}],"termid":"GO:0033766"}


id: PBO:0002752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor Mfm1","termid":"PBO:0002752"}


id: GO:0004196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of gelatin; little activity on hemoglobin. Specificity on B chain of insulin more restricted than pepsin A; does not cleave Phe1-Val2, Gln4-His5 or Gly23-Phe24.","definition_xrefs":["EC:3.4.23.25"],"gene_count":0,"genotype_count":0,"name":"obsolete saccharopepsin activity (obsolete GO:0004196)","synonyms":[{"name":"PRA","type":"related"},{"name":"Saccharomyces aspartic proteinase activity","type":"narrow"},{"name":"aspartic proteinase yscA","type":"related"},{"name":"proteinase A","type":"related"},{"name":"proteinase yscA","type":"related"},{"name":"saccharomyces aspartic proteinase activity","type":"related"},{"name":"saccharomyces cerevisiae aspartic proteinase A","type":"related"},{"name":"saccharopepsin activity","type":"exact"},{"name":"yeast endopeptidase A activity","type":"narrow"},{"name":"yeast proteinase A","type":"related"}],"termid":"GO:0004196"}


id: FYPO:0006035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitochondrial membrane potential, i.e. the electric potential existing across the mitochondrial membrane, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:14767070","GO:0051881","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial membrane potential","synonyms":[{"name":"normal mitochondrial membrane polarization","type":"exact"},{"name":"normal mitochondrial membrane potential during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006035"}


id: PBO:0088497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1","termid":"PBO:0088497"}


id: GO:0071017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the U11 and U4atac snRNPs from the precatalytic spliceosome; the U12, U5 and U6atac snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U12, and U5 and U6atac snRNPs.","definition_xrefs":["ISBN:0879697393","ISBN:0879695897","GOC:krc","GOC:ab","GOC:mah","PMID:16201866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"catalytic step 1 spliceosome","termid":"GO:0071012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U12-type catalytic step 1 spliceosome","synonyms":[{"name":"AT-AC catalytic step 1 spliceosome","type":"narrow"},{"name":"U12-type activated spliceosome","type":"exact"},{"name":"mammalian U12-type spliceosomal complex B*","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex B2","type":"narrow"},{"name":"minor catalytic step 1 spliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071017"}


id: FYPO:0006161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to chromatin during meiosis I","synonyms":[{"name":"abolished protein localisation to chromatin during meiosis I","type":"exact"},{"name":"abolished protein localization to chromatin during first meiotic nuclear division","type":"exact"},{"name":"protein localization to chromatin during meiosis I replication abolished","type":"exact"}],"termid":"FYPO:0006161"}


id: PBO:0051849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 4","termid":"PBO:0051849"}


id: GO:0102933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-4-amino-4,6-dideoxy-alpha-D-mannose + 2-oxoglutarate = GDP-4-dehydro-6-deoxy-alpha-D-mannose + L-glutamate.","definition_xrefs":["GOC:pz","RHEA:36779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose-4-aminotransferase activity","secondary_identifiers":["EC:2.6.1.102","MetaCyc:RXN-8953"],"termid":"GO:0102933"}


id: PBO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transporter 1 (predicted)","termid":"PBO:0002920"}


id: GO:0008864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + H2O = (6S)-5,6,7,8-tetrahydrofolate + formate + H+.","definition_xrefs":["RHEA:19833","EC:3.5.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"formyltetrahydrofolate deformylase activity","secondary_identifiers":["MetaCyc:FORMYLTHFDEFORMYL-RXN","KEGG_REACTION:R00944"],"synonyms":[{"name":"10-formyltetrahydrofolate amidohydrolase activity","type":"related"},{"name":"formyl-FH(4) hydrolase activity","type":"related"},{"name":"formyltetrahydrofolate hydrolase activity","type":"related"}],"termid":"GO:0008864"}


id: PBO:0027308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_UV-damage_excision_repair","termid":"PBO:0027308"}


id: PBO:0051054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2/OR15-2A (non-functional)","termid":"PBO:0051054"}


id: PBO:0083303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of MRS2 gene required for respiratory growth","termid":"PBO:0083303"}


id: PBO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc4","termid":"PBO:0003303"}


id: GO:0007086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process that results in the joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the nucleus, and contributes to mitotic nuclear envelope reassembly.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane fusion","termid":"GO:0000740"},{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0007049","GO:0016192","GO:0061024","GO:0044085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with nuclear membrane involved in mitotic nuclear envelope reassembly","termid":"GO:0007086"}


id: PR:O59725
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.05c gene.","definition_xrefs":["UniProtKB:O59725","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit mic60 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.05c","synonyms":[{"name":"Mitofilin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC3E7.05c","type":"exact"}],"termid":"PR:O59725"}


id: PBO:0051749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 15","termid":"PBO:0051749"}


id: GO:0003978
data:
  {"annotated_genes":["SJAG_02951","SJAG_01784","SJAG_03818"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70497,72300,73174],"is_not":false,"summary":null,"term":"GO:0003978"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose = UDP-galactose.","definition_xrefs":["EC:5.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose 4-epimerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:UDPGLUCEPIM-RXN","Reactome:R-HSA-70369","Reactome:R-HSA-5610036","RHEA:22168"],"synonyms":[{"name":"4-epimerase activity","type":"related"},{"name":"UDP-D-galactose 4-epimerase activity","type":"related"},{"name":"UDP-galactose 4-epimerase activity","type":"related"},{"name":"UDP-glucose epimerase activity","type":"related"},{"name":"UDPG-4-epimerase activity","type":"related"},{"name":"UDPgalactose 4-epimerase activity","type":"related"},{"name":"UDPglucose 4-epimerase activity","type":"related"},{"name":"galactowaldenase activity","type":"related"},{"name":"uridine diphosphate galactose 4-epimerase activity","type":"related"},{"name":"uridine diphosphate glucose 4-epimerase activity","type":"related"},{"name":"uridine diphospho-galactose-4-epimerase activity","type":"related"},{"name":"uridine diphosphoglucose 4-epimerase activity","type":"related"},{"name":"uridine diphosphoglucose epimerase activity","type":"related"}],"termid":"GO:0003978","terms_by_termid":{"GO:0003978":null}}


id: PBO:0075841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 2","termid":"PBO:0075841"}


id: GO:2000413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000413"}


id: PBO:0054622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2027","termid":"PBO:0054622"}


id: PBO:0062596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 6 pseudogene","termid":"PBO:0062596"}


id: PBO:0057099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR193b-365a host gene","termid":"PBO:0057099"}


id: GO:0019542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propionate, the anion derived from propionic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"propionate biosynthetic process","synonyms":[{"name":"propionate anabolism","type":"exact"},{"name":"propionate biosynthesis","type":"exact"},{"name":"propionate formation","type":"exact"},{"name":"propionate synthesis","type":"exact"}],"termid":"GO:0019542"}


id: PBO:0082873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to the plasma membrane (PM) and regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1p phosphatase to its substrate PI4P in the PM; localized to the bud via specific mRNA transport; non-tagged protein detected in a phosphorylated state in mitochondria; C-termini of Tcb1p, Tcb2p and Tcb3p interact","termid":"PBO:0082873"}


id: GO:1903626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["PMID:2001740","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"positively_regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0044248"],"is_obsolete":false,"name":"positive regulation of DNA catabolic process","synonyms":[{"name":"activation of DNA breakdown","type":"narrow"},{"name":"activation of DNA catabolic process","type":"narrow"},{"name":"activation of DNA catabolism","type":"narrow"},{"name":"activation of DNA degradation","type":"narrow"},{"name":"positive regulation of DNA breakdown","type":"exact"},{"name":"positive regulation of DNA catabolism","type":"exact"},{"name":"positive regulation of DNA degradation","type":"exact"},{"name":"up regulation of DNA breakdown","type":"exact"},{"name":"up regulation of DNA catabolic process","type":"exact"},{"name":"up regulation of DNA catabolism","type":"exact"},{"name":"up regulation of DNA degradation","type":"exact"},{"name":"up-regulation of DNA breakdown","type":"exact"},{"name":"up-regulation of DNA catabolic process","type":"exact"},{"name":"up-regulation of DNA catabolism","type":"exact"},{"name":"up-regulation of DNA degradation","type":"exact"},{"name":"upregulation of DNA breakdown","type":"exact"},{"name":"upregulation of DNA catabolic process","type":"exact"},{"name":"upregulation of DNA catabolism","type":"exact"},{"name":"upregulation of DNA degradation","type":"exact"}],"termid":"GO:1903626"}


id: PR:O74890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04935","PRO:DNx","PANTHER:PTHR11766:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.06c","secondary_identifiers":["UniProtKB:O74890"],"synonyms":[{"name":"Spom972h-YARS2","type":"exact"},{"name":"TyrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tyrosyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74890"}


id: GO:1901672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"regulation of systemic acquired resistance","termid":"GO:0010112"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of systemic acquired resistance","synonyms":[{"name":"activation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"activation of systemic acquired resistance","type":"narrow"},{"name":"positive regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of systemic acquired resistance","type":"exact"},{"name":"up-regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up-regulation of systemic acquired resistance","type":"exact"},{"name":"upregulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"upregulation of systemic acquired resistance","type":"exact"}],"termid":"GO:1901672"}


id: PBO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein","termid":"PBO:0000794"}


id: FYPO:0004396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which mitotic spindle elongation, i.e. the process of lengthening the distance between poles of the mitotic spindle, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000022","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle elongation","synonyms":[{"name":"normal mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"normal spindle elongation during mitosis","type":"exact"},{"name":"normal spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004396"}


id: GO:0042742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to bacterium","secondary_identifiers":["GO:0009816","GO:0042830"],"synonyms":[{"name":"antibacterial peptide activity","type":"related"},{"name":"defence response to bacteria","type":"exact"},{"name":"defence response to bacterium","type":"exact"},{"name":"defense response to bacteria","type":"exact"},{"name":"defense response to bacterium, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogenic bacteria","type":"narrow"},{"name":"resistance response to pathogenic bacterium","type":"narrow"}],"termid":"GO:0042742"}


id: PBO:0090275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit, dynamitin Jnm1","termid":"PBO:0090275"}


id: PR:O13310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- orb6 gene.","definition_xrefs":["UniProtKB:O13310","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase orb6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.12","synonyms":[{"name":"Spom972h-orb6","type":"exact"}],"termid":"PR:O13310"}


id: PBO:0040126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 12","termid":"PBO:0040126"}


id: PBO:0050223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 1","termid":"PBO:0050223"}


id: GO:0052693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epoxyqueuosine in tRNA + reductant = queuosine in tRNA + oxidised reductant.","definition_xrefs":["PMID:21502530","RHEA:32159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"epoxyqueuosine reductase activity","secondary_identifiers":["EC:1.17.99.6"],"termid":"GO:0052693"}


id: PBO:0003350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl protein thioesterase-dolichol pyrophosphate phosphatase fusion 1","termid":"PBO:0003350"}


id: FYPO:0004175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal in cells of the h- mating type.","definition_xrefs":["PMID:8668157","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating efficiency in h- cells","synonyms":[{"name":"reduced mating efficiency in h- cells","type":"exact"}],"termid":"FYPO:0004175"}


id: PR:P87231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A crossover junction endonuclease MUS81 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04324","PANTHER:PTHR13451:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossover junction endonuclease mus81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.05c","secondary_identifiers":["UniProtKB:P87231"],"synonyms":[{"name":"Spom972h-MUS81","type":"exact"}],"termid":"PR:P87231"}


id: PATO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001175 urine composition (obsolete PATO:0001175)","termid":"PATO:0001175"}


id: GO:0141117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents the activation of host complement by binding a soluble complement control protein (CCP) of the host and recuiting it to the microbe surface. The normal role of CCPs is to prevent complement activation on 'self' cellular targets. When soluble CCPs are recuited to the surface of a microbe, the complement fails to activate.","definition_xrefs":["PMID:24129254","PMID:17513779","PMID:27304426","PMID:22540535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by recruitment of complement control protein","synonyms":[{"name":"suppression of complement activation by another organism by recruitment of complement control protein","type":"broad"},{"name":"suppression of complement activation by another organism by recuitement of complement control protein","type":"exact"}],"termid":"GO:0141117"}


id: PBO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase D","termid":"PBO:0051704"}


id: PBO:0061095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notchless homolog 1","termid":"PBO:0061095"}


id: PBO:0045782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodysplasin A receptor","termid":"PBO:0045782"}


id: GO:0070789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of metulae over time, from its formation to the mature structure. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["PMID:9529886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metula development","synonyms":[{"name":"development of primary sterigmata","type":"exact"}],"termid":"GO:0070789"}


id: PR:Q9P7S8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23G3.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rax1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.05c","synonyms":[{"name":"Spom972h-SPAC23G3.05c","type":"exact"}],"termid":"PR:Q9P7S8"}


id: GO:0051015
data:
  {"annotated_genes":["SJAG_03025","SJAG_03088","SJAG_00970","SJAG_00677","SJAG_01894","SJAG_00938","SJAG_02396","SJAG_01268","SJAG_01964","SJAG_02075","SJAG_02245","SJAG_02431","SJAG_01993","SJAG_04621","SJAG_01384","SJAG_03011","SJAG_03703","SJAG_04498","SJAG_02700","SJAG_04100","SJAG_03086","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69960,70102,70237,70775,71354,73594,74009,74866,75174,75382,75527,76172,76524,77018,77493,77558,77673,77979,78133,78290,78524],"is_not":false,"summary":null,"term":"GO:0051015"},{"annotations":[75998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin binding","termid":"GO:0003779"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003779"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0003779","GO:0008092"],"is_obsolete":false,"name":"actin filament binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"F-actin binding","type":"exact"},{"name":"actin cross-linking activity","type":"related"}],"termid":"GO:0051015","terms_by_termid":{"GO:0003786":null,"GO:0051015":null}}


id: PBO:0071522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 25","termid":"PBO:0071522"}


id: PBO:0013014
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe Repressor of Activation","termid":"PBO:0013014"}


id: GO:0051957
data:
  {"annotated_genes":["SJAG_05346","SJAG_00991","SJAG_03591","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87187,88741,105667,94202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[88742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[94203,87188,88743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"positively_regulates","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amino acid transport","type":"narrow"},{"name":"positive regulation of amino acid transmembrane transport","type":"exact"},{"name":"stimulation of amino acid transport","type":"narrow"},{"name":"up regulation of amino acid transport","type":"exact"},{"name":"up-regulation of amino acid transport","type":"exact"},{"name":"upregulation of amino acid transport","type":"exact"}],"termid":"GO:0051957","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: PBO:0005402
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.37","termid":"PBO:0005402"}


id: GO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3a product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"complement component C3a binding","termid":"GO:0001850"}


id: GO:0014016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroblast. There are at least four stages through which the pluripotent cells of epiblast or blastula become neuroblasts.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast differentiation","termid":"GO:0014016"}


id: PBO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt3","termid":"PBO:0001803"}


id: GO:0090614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'methyl thioadenosine + H2O = 5'methyl thioinosine + NH3.","definition_xrefs":["PMID:23968233","RHEA:25025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5'-methylthioadenosine deaminase activity","secondary_identifiers":["EC:3.5.4.31"],"termid":"GO:0090614"}


id: GO:0010168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A novel compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have been found in Arabidopsis thaliana and related Brassicaceae species.","definition_xrefs":["PMID:11577182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ER body","synonyms":[{"name":"endoplasmic reticulum body","type":"exact"}],"termid":"GO:0010168"}


id: GO:0000055
data:
  {"annotated_genes":["SJAG_01391","SJAG_03719","SJAG_01065","SJAG_00178","SJAG_01358","SJAG_03882","SJAG_04308","SJAG_00753"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75038,75511,75855,78371,94934,100950,111259,112657],"is_not":false,"summary":null,"term":"GO:0000055"}]},"cv_name":"biological_process","definition":"The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00753":null,"SJAG_01065":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_03719":null,"SJAG_03882":null,"SJAG_04308":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006810","GO:0044085","GO:0006913","GO:0008150","GO:0051179","GO:0042254"],"is_obsolete":false,"name":"ribosomal large subunit export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000057"],"synonyms":[{"name":"50S ribosomal subunit export from nucleus","type":"narrow"},{"name":"60S ribosomal subunit export from nucleus","type":"narrow"},{"name":"ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"ribosomal large subunit export out of nucleus","type":"exact"},{"name":"ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:0000055","terms_by_termid":{"GO:0000055":null}}


id: PBO:0042878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 161","termid":"PBO:0042878"}


id: PBO:0088707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp2","termid":"PBO:0088707"}


id: PBO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase Ogm2","termid":"PBO:0001989"}


id: PBO:0090394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb2","termid":"PBO:0090394"}


id: FYPO:0001719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lithium ions. Cells stop growing (and may die) at a concentration of lithium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to lithium","synonyms":[{"name":"hypersensitive to lithium","type":"exact"},{"name":"sensitive to lithium during mitotic cell cycle","type":"related"},{"name":"sensitive to lithium during vegetative growth","type":"exact"},{"name":"sensitive to lithium ions","type":"exact"}],"termid":"FYPO:0001719"}


id: PBO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 143","termid":"PBO:0075094"}


id: GO:0071747
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgA immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgA immunoglobulin complex","termid":"GO:0071745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"IgA B cell receptor complex","synonyms":[{"name":"membrane-bound IgA","type":"narrow"},{"name":"membrane-bound IgA1","type":"narrow"},{"name":"membrane-bound IgA2","type":"narrow"},{"name":"surface IgA","type":"narrow"},{"name":"surface IgA1","type":"narrow"},{"name":"surface IgA2","type":"narrow"}],"termid":"GO:0071747"}


id: PBO:0073215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 5A","termid":"PBO:0073215"}


id: GO:0035470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"regulation of vascular wound healing","termid":"GO:0061043"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"positively_regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular wound healing","termid":"GO:0035470"}


id: FYPO:0002192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a normal volume and spheroid shape, and contain one or more septa each. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, normal volume septated spheroid cells (obsolete FYPO:0002192)","synonyms":[{"name":"inviable microcolony, normal volume septated rounded cells","type":"exact"},{"name":"inviable microcolony, normal volume septated spheroid vegetative cells","type":"exact"}],"termid":"FYPO:0002192"}


id: PATO:0001253
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of magenta color and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magenta","termid":"PATO:0000321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light magenta","termid":"PATO:0001253"}


id: PBO:0041906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene B","termid":"PBO:0041906"}


id: PBO:0059295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45 pseudogene 1","termid":"PBO:0059295"}


id: PBO:0042458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 73","termid":"PBO:0042458"}


id: FYPO:0002060
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA 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type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild 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type"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03198","SJAG_03575","SJAG_01946"],"name":"viable vegetative cell population","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_01794","SJAG_02592","SJAG_05207","SJAG_04703","SJAG_00409","SJAG_01242","SJAG_00426","SJAG_00429","SJAG_00514","SJAG_00364","SJAG_04464","SJAG_01946","SJAG_03892","SJAG_03198","SJAG_02527","SJAG_03453","SJAG_00266","SJAG_03720","SJAG_01355","SJAG_00601","SJAG_04697","SJAG_02763","SJAG_03449"],"single_locus_genotype_uniquenames":["vps4delta","sty1delta","rad26delta","cmp7delta","rad3delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","man1delta","ned1delta","cox6delta","cem1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","vps32delta","gms1delta","ras1delta","scd2delta","for3delta","oar2delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","atf1delta","scd1delta","gpd1delta","rip1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","tel1delta"],"synonyms":[{"name":"viable cell population during vegetative growth","type":"exact"},{"name":"viable vegetative cell population during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002060","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000674":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001408":null,"FYPO:0001690":null,"FYPO:0004481":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0056873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence C (pseudogene)","termid":"PBO:0056873"}


id: PBO:0040769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 4","termid":"PBO:0040769"}


id: PBO:0074319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 9","termid":"PBO:0074319"}


id: RO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"is_symbiosis","termid":"RO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_commensalism","termid":"RO:0002466"}


id: GO:1905391
data:
  {"annotated_genes":["SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103138],"is_not":false,"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any regulation of protein localization to cell division site that is involved in cell separation after cytokinesis.","definition_xrefs":["GOC:TermGenie","PMID:25411334","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in cell separation after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell division site involved in cell separation after cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cell separation following cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cytokinetic cell separation","type":"related"},{"name":"regulation of protein localisation to cell division site involved in mitotic cytokinetic cell separation","type":"exact"}],"termid":"GO:1905391","terms_by_termid":{"GO:1905391":null}}


id: PBO:0083804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that binds ribosomal protein L11; required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis; localizes to the nucleolus and in foci along nuclear periphery; cooperates with Ebp2p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering; mouse homolog shows altered expression in Huntington's disease model mice","termid":"PBO:0083804"}


id: PBO:0079479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin alpha","termid":"PBO:0079479"}


id: PBO:0087665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner nuclear membrane Asi ubiquitin ligase complex; the Asi complex targets both misfolded proteins of the inner nuclear membrane-associated degradation (INMAD) pathway and inner for ubiquitin-mediated degradation; acts with Asi1p and Asi3p to ensure the fidelity of SPS-sensor signaling by targeting latent unprocessed forms of Stp1p and Stp2p, maintaining the repressed state of gene expression in the absence of inducing amino acids","termid":"PBO:0087665"}


id: PBO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates per1","termid":"PBO:0003359"}


id: PBO:0056115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLAL1 divergent transcript","termid":"PBO:0056115"}


id: PBO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI family protein","termid":"PBO:0003346"}


id: SO:1000020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion of a cytidine to a guanine.","direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_to_purine_transversion","termid":"SO:1000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_G_transversion","synonyms":[{"name":"C to G transversion","type":"exact"}],"termid":"SO:1000020"}


id: PBO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level","termid":"PBO:0031010"}


id: SO:0000758
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized from RNA by reverse transcriptase that has been copied by PCR to make it double stranded.","direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA","termid":"SO:0000756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_cDNA","synonyms":[{"name":"double strand cDNA","type":"related"},{"name":"double stranded cDNA","type":"exact"},{"name":"double-strand cDNA","type":"related"}],"termid":"SO:0000758"}


id: PBO:0079637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 8","termid":"PBO:0079637"}


id: GO:0003106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin directly decreases the rate of glomerular filtration in the kidney. Glomerular filtration is the processs whereby blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of renal output by angiotensin","termid":"GO:0003083"},{"relation_name":"part_of","term_name":"negative regulation of glomerular filtration","termid":"GO:0003105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerular filtration by angiotensin","synonyms":[{"name":"angiotensin-mediated regulation of glomerular filtration","type":"broad"},{"name":"regulation of glomerular filtration by angiotensin","type":"broad"}],"termid":"GO:0003106"}


id: FYPO:0006959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of succinate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular succinate level","synonyms":[{"name":"increased cellular succinate level during mitotic cell cycle","type":"related"},{"name":"increased cellular succinate level during vegetative growth","type":"exact"},{"name":"increased cellular succinate(2-) level","type":"exact"},{"name":"increased succinate accumulation","type":"related"}],"termid":"FYPO:0006959"}


id: PBO:0027206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes,_septated_cell","termid":"PBO:0027206"}


id: PBO:0070548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 14","termid":"PBO:0070548"}


id: PATO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000131 relative size (obsolete PATO:0000131)","termid":"PATO:0000131"}


id: PBO:0039731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C2","termid":"PBO:0039731"}


id: GO:0033616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex assembly","termid":"GO:0043461"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane proton-transporting ATP synthase complex assembly","termid":"GO:0033616"}


id: GO:0007227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals that are initiated by the transmembrane protein Smoothened. In the presence of a Hedgehog signaling molecule, the Patched protein no longer inhibits the activity of Smoothened, and Smoothened signals via the Hedgehog signaling complex to activate downstream components of the Hedgehog signaling pathway.","definition_xrefs":["PMID:15057936"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction downstream of smoothened (obsolete GO:0007227)","termid":"GO:0007227"}


id: SO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter motif with consensus sequence CARCCCT.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv1_motif","synonyms":[{"name":"DMv1","type":"related"},{"name":"DMv1 motif","type":"exact"},{"name":"directional promoter motif v1","type":"related"}],"termid":"SO:0001165"}


id: GO:0097752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the stability of DNA.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA stability","termid":"GO:0097752"}


id: PBO:0063760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1 pseudogene 1","termid":"PBO:0063760"}


id: PATO:0000927
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to being sensitivity to the action of radiant energy.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photosensitivity","termid":"PATO:0000927"}


id: PBO:0089832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Vps901","termid":"PBO:0089832"}


id: FYPO:0004982
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114418,114420],"is_not":false,"summary":null,"term":"FYPO:0004982"}],"single_locus_phenotype":[{"annotations":[114406],"is_not":false,"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromeric region are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PMID:26369364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"increased centromeric transcript level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"increased accumulation of centromeric transcripts","type":"related"},{"name":"increased accumulation of centromeric transcripts during vegetative growth","type":"related"},{"name":"increased centromere transcript level","type":"exact"},{"name":"increased centromere-derived transcript level","type":"exact"},{"name":"increased centromeric transcript level during mitotic cell cycle","type":"related"},{"name":"increased centromeric transcript level during vegetative growth","type":"exact"},{"name":"increased level of centromeric transcripts","type":"exact"}],"termid":"FYPO:0004982","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004982":null}}


id: PBO:0084448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannoprotein that exhibits a tight association with the cell wall; required for cell wall stability in the absence of GPI-anchored mannoproteins; has a high serine-threonine content; expression is induced in cell wall mutants; SRL1 has a paralog, SVS1, that arose from the whole genome duplication","termid":"PBO:0084448"}


id: PBO:0060884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocan, pseudogene","termid":"PBO:0060884"}


id: PATO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000255 taste_acuity (obsolete PATO:0000255)","termid":"PATO:0000255"}


id: GO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075079)","termid":"GO:0075079"}


id: PBO:0048055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 4","termid":"PBO:0048055"}


id: PBO:0054756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2167","termid":"PBO:0054756"}


id: GO:1905290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["PMID:22128786","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium-mediated signaling","termid":"GO:0050849"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"negatively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"down regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"down regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"down-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"down-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"downregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"downregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"inhibition of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"inhibition of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"negative regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905290"}


id: PBO:0018237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Sqt1 (predicted)","termid":"PBO:0018237"}


id: GO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IIa hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIa hypersensitivity","termid":"GO:0001796"},{"relation_name":"is_a","term_name":"negative regulation of type II hypersensitivity","termid":"GO:0002893"},{"relation_name":"negatively_regulates","term_name":"type IIa hypersensitivity","termid":"GO:0001794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IIa hypersensitivity","synonyms":[{"name":"down regulation of type IIa hypersensitivity","type":"exact"},{"name":"down-regulation of type IIa hypersensitivity","type":"exact"},{"name":"downregulation of type IIa hypersensitivity","type":"exact"},{"name":"inhibition of type IIa hypersensitivity","type":"narrow"}],"termid":"GO:0001797"}


id: PBO:0028799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest","termid":"PBO:0028799"}


id: FYPO:0001629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular methionine level","termid":"FYPO:0001639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar methionine level","synonyms":[{"name":"normal vacuolar methionine level during vegetative growth","type":"exact"},{"name":"normal level of methionine in vacuole","type":"exact"},{"name":"normal vacuolar L-methionine level","type":"exact"},{"name":"normal vacuolar methionine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001629"}


id: GO:1990611
data:
  {"annotated_genes":["SJAG_01942","SJAG_00169","SJAG_04873","SJAG_00690","SJAG_02592","SJAG_00786","SJAG_04383","SJAG_02072","SJAG_03869"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90601,98576,99215],"is_not":false,"summary":null,"term":"GO:1990611"},{"annotations":[110635,89767,72014,88241,69924,94647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of cytoplasmic translational initiation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:16278445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation in response to stress","termid":"GO:1990497"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990611","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: PBO:0080391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS25 pseudogene 1","termid":"PBO:0080391"}


id: PBO:0060679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"norrin cystine knot growth factor NDP","termid":"PBO:0060679"}


id: FYPO:0002677
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114382,114390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[114389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[114381,114385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[114378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[114375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01787","SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pck1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","sty1delta","pck2delta"],"termid":"FYPO:0002677","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null}}


id: PR:000028945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase oxidized form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA/Ox+","pombase_gene_id":"SPAC29E6.05c","synonyms":[{"name":"MSRA/Ox+","type":"exact"},{"name":"Spom-MSRA/Ox+","type":"exact"}],"termid":"PR:000028945"}


id: PBO:0068626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 6, pseudogene","termid":"PBO:0068626"}


id: GO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell proliferation","synonyms":[{"name":"activation of endothelial cell proliferation","type":"narrow"},{"name":"stimulation of endothelial cell proliferation","type":"narrow"},{"name":"up regulation of endothelial cell proliferation","type":"exact"},{"name":"up-regulation of endothelial cell proliferation","type":"exact"},{"name":"upregulation of endothelial cell proliferation","type":"exact"}],"termid":"GO:0001938"}


id: PBO:0073163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC63 homolog, protein translocation regulator","termid":"PBO:0073163"}


id: PBO:0074832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28","termid":"PBO:0074832"}


id: FYPO:0002482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable spheroid vegetative cell","synonyms":[{"name":"inviable round vegetative cell","type":"related"},{"name":"inviable rounded vegetative cell","type":"exact"},{"name":"inviable spheroid cell","type":"exact"},{"name":"inviable spheroid cell during vegetative growth","type":"exact"},{"name":"inviable spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; spheroid vegetative cell","type":"exact"},{"name":"spheroid inviable cell","type":"exact"}],"termid":"FYPO:0002482"}


id: PBO:0067693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N5","termid":"PBO:0067693"}


id: PBO:0016043
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat PTBP3","termid":"PBO:0016043"}


id: PBO:0067333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 425, pseudogene","termid":"PBO:0067333"}


id: GO:0044088
data:
  {"annotated_genes":["SJAG_02433","SJAG_03137","SJAG_03386","SJAG_03072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061192"},{"annotations":[92965,105397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061191"},{"annotations":[72088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032889"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03386":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vacuole organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of vacuole biogenesis","type":"related"},{"name":"regulation of vacuole organisation","type":"exact"}],"termid":"GO:0044088","terms_by_termid":{"GO:0032889":null,"GO:0061191":null,"GO:0061192":null}}


id: GO:0007248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Movement of a MAP kinase to the nucleus in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (mating sensu Saccharomyces) (obsolete GO:0007248)","synonyms":[{"name":"nuclear translocation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007248"}


id: GO:0038118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-C chemokine type 7 receptor on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:15059845","PMID:15778365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"CCR7 signaling pathway","type":"related"}],"termid":"GO:0038118"}


id: PBO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family (predicted)","termid":"PBO:0000850"}


id: GO:1901525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"negative regulation of autophagy of mitochondrion","termid":"GO:1903147"},{"relation_name":"negatively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitophagy","synonyms":[{"name":"down regulation of macromitophagy","type":"exact"},{"name":"down-regulation of macromitophagy","type":"exact"},{"name":"downregulation of macromitophagy","type":"exact"},{"name":"inhibition of macromitophagy","type":"narrow"},{"name":"negative regulation of macromitophagy","type":"exact"}],"termid":"GO:1901525"}


id: GO:0018194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-alanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-alanine modification","termid":"GO:0018194"}


id: GO:0010964
data:
  {"annotated_genes":["SJAG_04369","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112733],"is_not":false,"summary":null,"term":"GO:0010964"},{"annotations":[103664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small non-coding RNA-mediated heterochromatin formation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"regulates","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of regulatory ncRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNAi-mediated heterochromatin assembly","type":"exact"},{"name":"regulation of chromatin silencing by small RNA","type":"narrow"},{"name":"regulation of heterochromatin assembly by small RNA","type":"narrow"},{"name":"regulation of ncRNA-mediated heterochromatin formation","type":"exact"},{"name":"regulation of small non-coding RNA-mediated heterochromatin formation","type":"narrow"}],"termid":"GO:0010964","terms_by_termid":{"GO:0010964":null,"GO:0060906":null}}


id: GO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, with the concomitant production of a small amount of ATP and the utilization of ADP in the initial kinase reactions.","definition_xrefs":["MetaCyc:P341-PWY","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucose catabolic process to pyruvate utilizing ADP","termid":"GO:0061719"}


id: GO:0035852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a horizontal cell is transported to, and/or maintained in, a specific location within the inner nuclear layer (INL) of the retina. A horizontal cell is a neuron that laterally connects other neurons in the inner nuclear layer (INL) of the retina. Targeting of retinal neurons to the appropriate lamina is vital to establish the architecture of the retina.","definition_xrefs":["CL:0000745","GOC:bf","GOC:yaf","PMID:18094249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization of cell","termid":"GO:0051674"},{"relation_name":"part_of","term_name":"retina layer formation","termid":"GO:0010842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"horizontal cell localization","synonyms":[{"name":"horizontal cell localisation","type":"exact"},{"name":"horizontal cell positioning","type":"exact"},{"name":"laminar positioning of retinal horizontal cell","type":"exact"},{"name":"retinal horizontal cell positioning","type":"exact"}],"termid":"GO:0035852"}


id: GO:0099073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle derived via budding from a mitochondrion. These vesicles often contain inner membrane and, much more rarely, cristae.","definition_xrefs":["GOC:bc","PMID:18207745","GOC:PARL-UCL","PMID:20619655","GOC:pad","PMID:22226745","PMID:23300790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"mitochondrion-derived vesicle","synonyms":[{"name":"MDV","type":"exact"}],"termid":"GO:0099073"}


id: PBO:0003627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide riboside kinase (predicted)","termid":"PBO:0003627"}


id: PBO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8S rRNA (predicted)","termid":"PBO:0001034"}


id: GO:0110050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(4-oxoglutarate)-L-cysteinylglycine + H2O = 2-oxoglutarate + L-cysteinylglycine.","definition_xrefs":["RHEA:54532","PMID:28373563","GOC:ka"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"deaminated glutathione amidase activity","secondary_identifiers":["EC:3.5.1.128"],"termid":"GO:0110050"}


id: GO:0019473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including glutarate, by acetylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process","termid":"GO:0019477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"L-lysine catabolic process to glutarate, by acetylation","secondary_identifiers":["MetaCyc:LYSDEGII-PWY"],"synonyms":[{"name":"L-lysine breakdown to glutarate, by acetylation","type":"exact"},{"name":"L-lysine degradation to glutarate, by acetylation","type":"exact"}],"termid":"GO:0019473"}


id: PBO:0067336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 429, pseudogene","termid":"PBO:0067336"}


id: GO:0019486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-alanine into other compounds, including mevalonate semialdehyde, by transamination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine catabolic process","termid":"GO:0019484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"beta-alanine catabolic process to mevalonate semialdehyde, by transamination","secondary_identifiers":["MetaCyc:BETA-ALA-DEGRADATION-I-PWY"],"synonyms":[{"name":"beta-alanine breakdown to mevalonate semialdehyde, by transamination","type":"exact"},{"name":"beta-alanine degradation to mevalonate semialdehyde, by transamination","type":"exact"}],"termid":"GO:0019486"}


id: GO:0032139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a dinucleotide insertion or deletion.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"dinucleotide insertion or deletion binding","synonyms":[{"name":"dinucleotide insertion binding","type":"narrow"}],"termid":"GO:0032139"}


id: SO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Translational regulation of the stationary phase sigma factor RpoS is mediated by the formation of a double-stranded RNA stem-loop structure in the upstream region of the rpoS messenger RNA, occluding the translation initiation site. Clones carrying rprA (RpoS regulator RNA) increased the translation of RpoS. The rprA gene encodes a 106 nucleotide regulatory RNA. As with DsrA Rfam:RF00014, RprA is predicted to form three stem-loops. Thus, at least two small RNAs, DsrA and RprA, participate in the positive regulation of RpoS translation. Unlike DsrA, RprA does not have an extensive region of complementarity to the RpoS leader, leaving its mechanism of action unclear. RprA is non-essential.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RprA_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/RprA_RNA"],"synonyms":[{"name":"RprA RNA","type":"exact"}],"termid":"SO:0000387"}


id: PBO:0091758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper exporter Ctr6","termid":"PBO:0091758"}


id: PBO:0091261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, not reproduced","termid":"PBO:0091261"}


id: PBO:0060446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADK2 antisense RNA 1","termid":"PBO:0060446"}


id: PBO:0045898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor 2 kinase","termid":"PBO:0045898"}


id: GO:1905330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["GOC:bhm","PMID:25745997","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of morphogenesis of an epithelium","synonyms":[{"name":"regulation of epithelium morphogenesis","type":"exact"}],"termid":"GO:1905330"}


id: PR:P78963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein arginine N-methyltransferase 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10738:SF0","OMA:SCHPO03206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine N-methyltransferase skb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.11c","secondary_identifiers":["UniProtKB:P78963"],"synonyms":[{"name":"Spom972h-PRMT5","type":"exact"},{"name":"shk1 kinase-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II PRMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II protein arginine N-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78963"}


id: FYPO:0001148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing amiloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on amiloride","synonyms":[{"name":"normal cell population growth in presence of amiloride","type":"exact"},{"name":"normal cell population growth on amiloride","type":"exact"},{"name":"normal cellular response to amiloride","type":"related"},{"name":"normal vegetative cell population growth on amiloride","type":"exact"}],"termid":"FYPO:0001148"}


id: PBO:0085845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity","termid":"PBO:0085845"}


id: GO:0018445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of prothoracicotrophic hormone, a peptide hormone that is secreted by the brain and, upon receptor binding, acts on the prothoracic gland to stimulate the release of ecdysone in insects.","definition_xrefs":["GOC:mah","PMID:3301403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0098772","GO:0140677","GO:0005515"],"is_obsolete":false,"name":"prothoracicotrophic hormone activity","termid":"GO:0018445"}


id: PBO:0043092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 4","termid":"PBO:0043092"}


id: PBO:0028555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_import_into_nucleus","termid":"PBO:0028555"}


id: PBO:0056587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of DNA damage checkpoint 1","termid":"PBO:0056587"}


id: PATO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pressure which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pressure","termid":"PATO:0001025"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pressure","synonyms":[{"name":"high pressure","type":"exact"}],"termid":"PATO:0001576"}


id: PBO:0061942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily Q member 1B pseudogene","termid":"PBO:0061942"}


id: PBO:0069595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 871, pseudogene","termid":"PBO:0069595"}


id: PBO:0039784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 11","termid":"PBO:0039784"}


id: PBO:0003183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn7","termid":"PBO:0003183"}


id: GO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homogentisate + O2 = 4-maleylacetoacetate + H+.","definition_xrefs":["RHEA:15449","EC:1.13.11.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"homogentisate 1,2-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-71164","KEGG_REACTION:R02519","MetaCyc:HOMOGENTISATE-12-DIOXYGENASE-RXN","UM-BBD_reactionID:r0105"],"synonyms":[{"name":"homogentisate dioxygenase activity","type":"related"},{"name":"homogentisate oxidase activity","type":"related"},{"name":"homogentisate oxygenase activity","type":"related"},{"name":"homogentisate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"homogentisic acid oxidase activity","type":"related"},{"name":"homogentisic acid oxygenase activity","type":"related"},{"name":"homogentisic oxygenase activity","type":"related"},{"name":"homogentisicase activity","type":"related"}],"termid":"GO:0004411"}


id: PBO:0035956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methylation_during_vegetative_growth","termid":"PBO:0035956"}


id: PBO:0012026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein involved in transcriptional regulation (predicted)","termid":"PBO:0012026"}


id: GO:0004317
data:
  {"annotated_genes":["SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96027],"is_not":false,"summary":null,"term":"GO:0004317"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-hydroxypalmitoyl-[acyl-carrier protein] = 2-hexadecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["RHEA:41908","PMID:8088535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","termid":"GO:0019171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04462"],"synonyms":[{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase (hexadec-2-enoyl-acyl-carrier protein-forming)","type":"exact"},{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase activity","type":"exact"},{"name":"(3R)-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-acyl-carrier-protein dehydratase activity","type":"exact"}],"termid":"GO:0004317","terms_by_termid":{"GO:0004317":null}}


id: GO:1903074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TRAIL death-inducing signaling complex.","definition_xrefs":["PMID:21785459","GOC:bf","GOC:PARL","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex assembly","termid":"GO:0071550"},{"relation_name":"part_of","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TRAIL death-inducing signaling complex assembly","synonyms":[{"name":"TRAIL DISC assembly","type":"exact"},{"name":"TRAIL DISC formation","type":"exact"},{"name":"TRAIL death-inducing signaling complex formation","type":"exact"},{"name":"TRAIL death-inducing signalling complex assembly","type":"exact"},{"name":"TRAIL death-inducing signalling complex formation","type":"exact"}],"termid":"GO:1903074"}


id: PBO:0034199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intracellular_endoparasite_of","termid":"PBO:0034199"}


id: PBO:0068836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 74, pseudogene","termid":"PBO:0068836"}


id: GO:1901787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoyl-CoA.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"benzoyl-CoA metabolic process","synonyms":[{"name":"benzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901787"}


id: PBO:0084167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of the mitochondrial pyruvate carrier (MPC); expressed during growth on fermentable carbon sources, and heterodimerizes with Mpc1p to form the fermentative isoform of MPC; MPC localizes to the mitochondrial inner membrane and mediates pyruvate uptake; MPC2 paralog, MPC3, heterodimerizes with Mpc1p to form the respiratory MPC isoform","termid":"PBO:0084167"}


id: PBO:0046614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group MER61 member 1","termid":"PBO:0046614"}


id: PBO:0085137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for maturation of 18S rRNA; member of the eIF4A subfamily of DEAD-box ATP-dependent RNA helicases; 18S rRNA biogenesis defect of the null mutant is functionally complemented by human EIF4A3","termid":"PBO:0085137"}


id: PBO:0060040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 28","termid":"PBO:0060040"}


id: GO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process (obsolete GO:0042136)","synonyms":[{"name":"neurotransmitter anabolism","type":"exact"},{"name":"neurotransmitter biosynthesis","type":"exact"},{"name":"neurotransmitter biosynthesis and storage","type":"broad"},{"name":"neurotransmitter biosynthetic process and storage","type":"broad"},{"name":"neurotransmitter formation","type":"exact"},{"name":"neurotransmitter synthesis","type":"exact"}],"termid":"GO:0042136"}


id: GO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:0035876)","synonyms":[{"name":"maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0035876"}


id: PBO:0055479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2912","termid":"PBO:0055479"}


id: internal:name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name","termid":"internal:name"}


id: PBO:0031791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle","termid":"PBO:0031791"}


id: PBO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1752 family protein, involved in regulation of transcription (predicted)","termid":"PBO:0000872"}


id: PBO:0017073
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RPR1","termid":"PBO:0017073"}


id: PBO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 2","termid":"PBO:0072219"}


id: GO:1990095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:kmv","PMID:16166371"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species (obsolete GO:1990095)","termid":"GO:1990095"}


id: PBO:0056055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer associated transcript 1","termid":"PBO:0056055"}


id: PBO:0057087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 183","termid":"PBO:0057087"}


id: GO:0075167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein gamma subunit-mediated signal transduction in response to host (obsolete GO:0075167)","synonyms":[{"name":"negative regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075167"}


id: PBO:0084383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity glucose transporter of the major facilitator superfamily; expression is induced in low or high glucose conditions; HXT3 has a paralog, HXT5, that arose from the whole genome duplication","termid":"PBO:0084383"}


id: GO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a leucophore cell. Leucophores are pigment cells derived from the neural crest. They contain uric acid or other purine crystals, deposited in stacks called leucosomes. This gives them a white appearance.","definition_xrefs":["GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucophore differentiation","synonyms":[{"name":"leucophore cell differentiation","type":"exact"}],"termid":"GO:0048772"}


id: PBO:0078808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 25-1","termid":"PBO:0078808"}


id: GO:0050486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxyl group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"intramolecular hydroxytransferase activity","secondary_identifiers":["EC:5.4.4.-"],"synonyms":[{"name":"intramolecular transferase activity, transferring hydroxy groups","type":"exact"}],"termid":"GO:0050486"}


id: PBO:0056917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY2 divergent transcript","termid":"PBO:0056917"}


id: PBO:0080210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestigial like family member 4","termid":"PBO:0080210"}


id: PBO:0067680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 865, pseudogene","termid":"PBO:0067680"}


id: GO:0004865
data:
  {"annotated_genes":["SJAG_02380","SJAG_03309","SJAG_04999"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73979,74981,83427],"is_not":false,"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a serine/threonine protein phosphatase, an enzyme that catalyzes the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase inhibitor activity","termid":"GO:0004864"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03309":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"protein serine/threonine phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0004865","terms_by_termid":{"GO:0004865":null}}


id: SO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has no parent. It is the original gene, which is functional in some species but disrupted in some way (indels, mutation, recombination) in another species or strain.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unitary_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unitary","type":"exact"},{"name":"unitary pseudogenic tRNA","type":"exact"}],"termid":"SO:0002199"}


id: FYPO:0007344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to centromere central core during vegetative growth","synonyms":[{"name":"increased protein localisation to centromere central core during vegetative growth","type":"exact"},{"name":"increased protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, centric central core","type":"exact"},{"name":"increased protein localization to chromosome, centromeric central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007344"}


id: GO:0070089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the chloride concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient.","definition_xrefs":["GOC:mtg_transport","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"monoatomic ion-gated channel activity","termid":"GO:0022839"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"chloride-activated potassium channel activity","termid":"GO:0070089"}


id: FYPO:0007951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is higher than normal when a cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mating efficiency","termid":"FYPO:0001043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased mating effciency during nitrogen starvation","termid":"FYPO:0007951"}


id: PBO:0049775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 2","termid":"PBO:0049775"}


id: PBO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA/biotin carboxylase","termid":"PBO:0000866"}


id: PBO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase Spi1","termid":"PBO:0004939"}


id: FYPO:0002667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"},{"relation_name":"is_a","term_name":"decreased peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased peptide-serine-N-acetyltransferase activity","synonyms":[{"name":"reduced peptide-serine-N-acetyltransferase activity","type":"exact"}],"termid":"FYPO:0002667"}


id: GO:0030476
data:
  {"annotated_genes":["SJAG_00974","SJAG_03483","SJAG_01321","SJAG_03013","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83773,85747,87214,109154,112758],"is_not":false,"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ascospore wall. During sporulation in Ascomycota, each ascospore nucleus becomes surrounded by a specialized spore wall, formed by deposition of spore wall components in the lumenal space between the outer and inner leaflets of the prospore membrane. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mcc","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"spore wall assembly","termid":"GO:0042244"},{"relation_name":"is_a","term_name":"fungal-type cell wall assembly","termid":"GO:0071940"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03483":null,"SJAG_04238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0007049","GO:0030437","GO:0008150"],"is_obsolete":false,"name":"ascospore wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007152"],"synonyms":[{"name":"spore wall assembly","type":"broad"}],"termid":"GO:0030476","terms_by_termid":{"GO:0030476":null}}


id: FYPO:0001600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which isoleucine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal isoleucine import","synonyms":[{"name":"normal L-isoleucine import","type":"exact"},{"name":"normal L-isoleucine import across plasma membrane","type":"exact"},{"name":"normal isoleucine import during mitotic cell cycle","type":"related"},{"name":"normal isoleucine import during vegetative growth","type":"exact"},{"name":"normal isoleucine import into cell","type":"exact"},{"name":"normal isoleucine uptake","type":"exact"}],"termid":"FYPO:0001600"}


id: PBO:0012237
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterododecameric","termid":"PBO:0012237"}


id: CHEBI:75044
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phleomycin","termid":"CHEBI:75044"}


id: PBO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-output_of","termid":"PBO:0017451"}


id: SO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A FRE is an enhancer element necessary and sufficient to confer filamentation associated expression in S. cerevisiae.","definition_xrefs":["PMID:1489142","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer_binding_site","termid":"SO:0001461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRE","synonyms":[{"name":"filamentation and invasion response element","type":"exact"}],"termid":"SO:0002046"}


id: PBO:0109294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in head and neck cancer 2","termid":"PBO:0109294"}


id: PBO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.7","termid":"PBO:0002359"}


id: PBO:0002766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 12 (predicted)","termid":"PBO:0002766"}


id: GO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"myosin II binding","termid":"GO:0045159"}


id: GO:0051568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 4 of the histone.","definition_xrefs":["GOC:ai","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 methylation (obsolete GO:0051568)","synonyms":[{"name":"histone H3 K4 methylation","type":"exact"},{"name":"histone H3K4me","type":"exact"},{"name":"histone lysine H3 K4 methylation","type":"exact"}],"termid":"GO:0051568"}


id: PBO:0085966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction blocks cell cycle arrest in the presence of mating pheromone; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085966"}


id: GO:0102126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + coniferyl aldehyde + NADPH + O2 = 5-hydroxy-coniferaldehyde + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"coniferyl aldehyde 5-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-1142"],"termid":"GO:0102126"}


id: PBO:0091632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, pdc102-antisense","termid":"PBO:0091632"}


id: FYPO:0006314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which formation of the ascus, the sac-like structure that encloses spores, does not occur.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascus development","termid":"FYPO:0000680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000680"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000680"],"is_obsolete":false,"name":"abolished ascus formation","synonyms":[{"name":"abolished asci formation","type":"exact"},{"name":"abolished ascus development","type":"related"}],"termid":"FYPO:0006314"}


id: PBO:0073050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 8","termid":"PBO:0073050"}


id: GO:0060069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with the positioning of the mitotic spindle.","definition_xrefs":["GOC:dph","PMID:11532397","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"establishment of mitotic spindle localization","termid":"GO:0040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0023052","GO:0000226","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"Wnt signaling pathway, regulating spindle positioning","synonyms":[{"name":"Wnt receptor signaling pathway, regulating spindle positioning","type":"exact"},{"name":"Wnt receptor signalling pathway, regulating spindle positioning","type":"exact"},{"name":"Wnt-activated signaling pathway, regulating spindle positioning","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"broad"}],"termid":"GO:0060069"}


id: GO:1990403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the brain over time, from its formation to the mature structure.","definition_xrefs":["PMID:15918910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic brain development","termid":"GO:1990403"}


id: FYPO:0004141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione (GSH) measured in a cell that is subject to nitrogen starvation is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glutathione level during nitrogen starvation","synonyms":[{"name":"decreased cellular GSH level during nitrogen starvation","type":"exact"},{"name":"decreased cellular L-gamma-glutamyl-L-cysteinylglycine level during nitrogen starvation","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen depletion","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen deprivation","type":"exact"},{"name":"decreased cellular reduced glutathione level during nitrogen starvation","type":"exact"},{"name":"decreased glutathione accumulation during nitrogen starvation","type":"related"},{"name":"reduced cellular glutathione level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004141"}


id: FYECO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are first grown in minimal medium lacking nitrogen, then subjected to heat shock, and are then allowed to recover in rich medium at standard temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation followed by heat shock and recovery at normal temperature","synonyms":[{"name":"nitrogen starvation followed by heat shock and recovery at permissive temperature","type":"related"}],"termid":"FYECO:0000309"}


id: GO:0033313
data:
  {"annotated_genes":["SJAG_03327","SJAG_03529","SJAG_03026","SJAG_00364","SJAG_03438","SJAG_01082","SJAG_01330","SJAG_02771","SJAG_04287","SJAG_01837","SJAG_04259","SJAG_01680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109563,101517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[77451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[86885,101815,111089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[84589,76816,101816,109327,111090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[111684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[108868],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[96620],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a meiotic cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a meiotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072411"],"synonyms":[{"name":"meiotic cell cycle checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0033313","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0044778":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0042858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 74","termid":"PBO:0042858"}


id: PBO:0059152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 4","termid":"PBO:0059152"}


id: GO:0022034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of rhombomere cells, resulting in the expansion of the cell population.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere cell proliferation","termid":"GO:0022034"}


id: PBO:0081939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 2","termid":"PBO:0081939"}


id: PBO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere-associated in Yarrowia lipolytica","termid":"PBO:0001487"}


id: PBO:0081241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8-ERVK3-1 readthrough (NMD candidate)","termid":"PBO:0081241"}


id: PBO:0045729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 8","termid":"PBO:0045729"}


id: GO:0099099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ion channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["GOC:dos","PMID:35704701","Wikipedia:G_protein-gated_ion_channel"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"G-protein gated monoatomic ion channel activity","synonyms":[{"name":"G-protein gated ion channel activity","type":"broad"}],"termid":"GO:0099099"}


id: GO:1900097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of dosage compensation by inactivation of X chromosome (obsolete GO:1900097)","synonyms":[{"name":"activation of Barr body formation","type":"related"},{"name":"activation of X chromosome inactivation","type":"exact"},{"name":"activation of chromosome inactivation","type":"broad"},{"name":"activation of dosage compensation, by inactivation of X chromosome","type":"narrow"},{"name":"positive regulation of Barr body formation","type":"related"},{"name":"positive regulation of X chromosome inactivation","type":"exact"},{"name":"positive regulation of chromosome inactivation","type":"broad"},{"name":"up regulation of Barr body formation","type":"related"},{"name":"up regulation of X chromosome inactivation","type":"exact"},{"name":"up regulation of chromosome inactivation","type":"broad"},{"name":"up regulation of dosage compensation, by inactivation of X chromosome","type":"exact"},{"name":"up-regulation of Barr body formation","type":"related"},{"name":"up-regulation of X chromosome inactivation","type":"exact"},{"name":"up-regulation of chromosome inactivation","type":"broad"},{"name":"up-regulation of dosage compensation, by inactivation of X chromosome","type":"exact"},{"name":"upregulation of Barr body formation","type":"related"},{"name":"upregulation of X chromosome inactivation","type":"exact"},{"name":"upregulation of chromosome inactivation","type":"broad"},{"name":"upregulation of dosage compensation, by inactivation of X chromosome","type":"exact"}],"termid":"GO:1900097"}


id: PBO:0005526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn6 (predicted)","termid":"PBO:0005526"}


id: PBO:0031577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization","termid":"PBO:0031577"}


id: GO:0106251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N4-acetylcytidine +H2O = cytidine + acetate.","definition_xrefs":["GOC:imk","PMID:31964920","RHEA:62932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N4-acetylcytidine amidohydrolase activity","termid":"GO:0106251"}


id: PBO:0085107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear SAM-dependent mono- and asymmetric methyltransferase; modifies hnRNPs, including Npl3p and Hrp1p, affecting their activity and nuclear export; methylates U1 snRNP protein Snp1p, ribosomal protein Rps2p, and histones H3 and H4; interacts genetically with genes encoding components of Rpd3(L) and this interaction is important for Rpd3 recruitment to the subtelomeric region","termid":"PBO:0085107"}


id: PBO:0077533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM246 antisense RNA 1","termid":"PBO:0077533"}


id: PBO:0076448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 4","termid":"PBO:0076448"}


id: PBO:0090167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Eaf1","termid":"PBO:0090167"}


id: PBO:0062670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 1 pseudogene","termid":"PBO:0062670"}


id: PBO:0049887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 6","termid":"PBO:0049887"}


id: GO:0044846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism reduces the indole acetic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml","PMID:18056646"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of indole acetic acid levels in host (obsolete GO:0044846)","synonyms":[{"name":"negative regulation by symbiont of IAA levels in host","type":"exact"},{"name":"negative regulation by symbiont of auxin levels in host","type":"exact"}],"termid":"GO:0044846"}


id: PATO:0001430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An medium acidity quality inhering in a solution by virtue of the bearer's a low concentration of H+ ions.","definition_xrefs":["chemicool:chemicool"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medium acidity","termid":"PATO:0001428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline","termid":"PATO:0001430"}


id: GO:0035988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:yaf","CL:0000138","PMID:21484705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte proliferation","synonyms":[{"name":"cartilage cell proliferation","type":"exact"},{"name":"chondrocyte cell proliferation","type":"exact"}],"termid":"GO:0035988"}


id: PBO:0053242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 6","termid":"PBO:0053242"}


id: PBO:0045981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase","termid":"PBO:0045981"}


id: FYPO:0005909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an RNA molecule is abnormal during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["GO:0031123","PMID:23066505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"abnormal RNA 3'-end processing during cellular response to ER stress","type":"exact"},{"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005909"}


id: PBO:0085193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine carbamoyltransferase; also known as carbamoylphosphate:L-ornithine carbamoyltransferase; catalyzes the biosynthesis of the arginine precursor citrulline","termid":"PBO:0085193"}


id: GO:0061945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of protein K-48-linked ubiquitination, a protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:23460740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K48-linked ubiquitination","termid":"GO:0070936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K48-linked ubiquitination","termid":"GO:0061945"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: FYPO:0007285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows an abnormal temporal pattern of localization. For example, a protein may move from one cell tip to the other at an altered frequency or amplitude.","definition_xrefs":["PomBase:mah","PMID:26960792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal dynamic protein localization to cell tip","synonyms":[{"name":"abnormal dynamic protein localization to cell end","type":"exact"},{"name":"abnormal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"abnormal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007285"}


id: PBO:0003971
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab Escort Protein","termid":"PBO:0003971"}


id: GO:0102716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A28 + 2-oxoglutarate + O2 = (2betaOH)-gibberellin28 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gibberellin A28,oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-6547"],"termid":"GO:0102716"}


id: PR:Q09828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00303","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.09","secondary_identifiers":["UniProtKB:Q09828"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS2","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09828"}


id: GO:0005381
data:
  {"annotated_genes":["SJAG_04737","SJAG_02968","SJAG_04260","SJAG_04867","SJAG_02473","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93422,108300,108875],"is_not":false,"summary":null,"term":"GO:0005381"},{"annotations":[70177,99053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015093"},{"annotations":[87883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"}]},"cv_name":"molecular_function","definition":"Enables the transfer of iron (Fe) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02473":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"iron ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-435349","Reactome:R-HSA-917936","GO:0097689","Reactome:R-HSA-5623558","Reactome:R-HSA-5655733","GO:0005382","GO:0016033","Reactome:R-HSA-904830"],"synonyms":[{"name":"iron cation channel activity","type":"exact"},{"name":"iron channel activity","type":"exact"},{"name":"iron transporter activity","type":"exact"},{"name":"multicopper ferroxidase iron transport mediator activity","type":"related"},{"name":"transmembrane iron ion permease activity","type":"exact"},{"name":"transmembrane iron permease activity","type":"exact"},{"name":"zinc, iron permease activity","type":"related"}],"termid":"GO:0005381","terms_by_termid":{"GO:0005381":null,"GO:0015093":null,"GO:0061840":null}}


id: GO:0051018
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a protein kinase A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein kinase A binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PKA binding","type":"exact"},{"name":"protein kinase A anchoring activity","type":"related"}],"termid":"GO:0051018","terms_by_termid":{"GO:0034236":null}}


id: PBO:0085089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein that acts as a recycling factor; mediates the nuclear export of Srp1p (importin alpha) back to the cytoplasm after its import substrates have been released into the nucleoplasm, thereby allowing the participation of Srp1p in multiple rounds of nuclear import; required for accurate chromosome segregation; homolog of metazoan CAS and human CSE1L, overexpression of which is implicated in cancer progression","termid":"PBO:0085089"}


id: PBO:0067387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 492, pseudogene","termid":"PBO:0067387"}


id: GO:1990846
data:
  {"annotated_genes":["SJAG_02874","SJAG_01348"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90872,92441],"is_not":false,"summary":null,"term":"GO:1990846"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonucleoside-diphosphate reductase.","definition_xrefs":["PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01348":null,"SJAG_02874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0098772","GO:0004857","GO:0030234"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990846","terms_by_termid":{"GO:1990846":null}}


id: FYPO:0003643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of urease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal urease activity","termid":"FYPO:0003642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased urease activity","synonyms":[{"name":"reduced urease activity","type":"exact"}],"termid":"FYPO:0003643"}


id: PBO:0039714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B","termid":"PBO:0039714"}


id: GO:0043665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The soluble material inside the peribacteroid membrane, but outside of the bacteroid, within a bacteroid-containing symbiosome of a host cell.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid fluid","termid":"GO:0043665"}


id: GO:0071092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha3-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA3-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071092"}


id: GO:0097071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of two interferon regulatory proteins (IRFs); may be homodimeric or heterodimeric. The activation of a latent closed conformation of IRF in the cytoplasm is triggered by phosphorylation of Ser/Thr residues in a C-terminal region. Phosphorylation stimulates the C-terminal autoinhibitory domain to attain a highly extended conformation triggering dimerization through extensive contacts to a second subunit.","definition_xrefs":["PMID:20043992","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interferon regulatory factor complex","synonyms":[{"name":"IRF complex","type":"exact"}],"termid":"GO:0097071"}


id: FYPO:0005463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a cytoplasmic microtubule during interphase of the mitotic cell cycle, does not continue until microtubules reach the ends of the cell.","definition_xrefs":["PomBase:mah","PMID:12894167"],"direct_ancestors":[{"relation_name":"has_output","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased spatial extent of interphase microtubule polymerization","synonyms":[{"name":"decreased growth of interphase microtubules to cell end","type":"exact"},{"name":"decreased spatial extent of cytoplasmic microtubule polymerization during mitotic interphase","type":"exact"},{"name":"decreased spatial extent of interphase cytoplasmic microtubule polymerization","type":"exact"},{"name":"decreased spatial extent of interphase microtubule growth","type":"exact"},{"name":"decreased spatial extent of interphase microtubule polymerisation","type":"exact"},{"name":"decreased spatial extent of interphase microtubule polymerization","type":"related"}],"termid":"FYPO:0005463"}


id: PBO:0003959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM loader","termid":"PBO:0003959"}


id: FYPO:0001865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) is normal. Transcription of specific genes is repressed in the presence of glucose, as in wild type.","definition_xrefs":["GO:0045014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"},{"relation_name":"is_a","term_name":"transcription regulation phenotype during vegetative growth","termid":"FYPO:0001335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal negative regulation of transcription by glucose","synonyms":[{"name":"normal glucose repression","type":"exact"},{"name":"normal glucose repression during vegetative growth","type":"exact"},{"name":"normal glucose-sensitive transcription","type":"related"},{"name":"normal negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"normal negative regulation of transcription by glucose during vegetative growth","type":"exact"}],"termid":"FYPO:0001865"}


id: PBO:0003064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidase Dug1 (predicted)","termid":"PBO:0003064"}


id: PBO:0018004
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ssb1 stimulates helicase activity at low ATP concentration (0.2 mM)","termid":"PBO:0018004"}


id: PBO:0089616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrogen/potassium transport system protein","termid":"PBO:0089616"}


id: PR:Q92399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10917:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.12","secondary_identifiers":["UniProtKB:Q92399"],"synonyms":[{"name":"DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC14C8.12","type":"related"},{"name":"Spom972h-POLR2H","type":"exact"}],"termid":"PR:Q92399"}


