# terms

id: PBO:0013005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsense_mutation","termid":"PBO:0013005"}


id: PBO:0015656
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.1x10^4 min-1 M-1","termid":"PBO:0015656"}


id: PBO:0089189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional proteasome assembly, lid subcomplex subunit Rpn15/Dss1","termid":"PBO:0089189"}


id: PBO:0081969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 antisense RNA 1","termid":"PBO:0081969"}


id: GO:0030003
data:
  {"annotated_genes":["SJAG_00299","SJAG_01078","SJAG_00301","SJAG_03879","SJAG_03516","SJAG_02080","SJAG_01445","SJAG_00136","SJAG_01435","SJAG_04955","SJAG_04031","SJAG_02470","SJAG_01397","SJAG_03631","SJAG_02578","SJAG_02834","SJAG_04028","SJAG_04167","SJAG_01803","SJAG_04260","SJAG_00328","SJAG_04032","SJAG_00668","SJAG_04760","SJAG_00212","SJAG_03866","SJAG_01817","SJAG_02883","SJAG_04743","SJAG_04698","SJAG_01694","SJAG_01990","SJAG_01129","SJAG_02474","SJAG_01400","SJAG_04757","SJAG_04584","SJAG_04258","SJAG_02735","SJAG_02716","SJAG_03850","SJAG_00516","SJAG_02399","SJAG_00802","SJAG_02023","SJAG_04403","SJAG_04607","SJAG_03528","SJAG_02847","SJAG_04675","SJAG_00963","SJAG_01669","SJAG_03793","SJAG_00822","SJAG_04111","SJAG_04867","SJAG_04677","SJAG_01541","SJAG_04616","SJAG_01353","SJAG_04975","SJAG_01004","SJAG_00792","SJAG_02019","SJAG_02457","SJAG_00532","SJAG_00923","SJAG_04096","SJAG_01007","SJAG_00222","SJAG_01913","SJAG_03862","SJAG_05294","SJAG_02532"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59313,88848,97240,108873],"is_not":false,"summary":null,"term":"GO:0030003"},{"annotations":[99040,89508,89516],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[70517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[78570,78504,72869,108444,70250,76942,70875,113520,73139,74292,72055,93448,71348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[88547,95445,74199,76740,103039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[99510,74076,76741,73552,87740,74200,70973,89473,108958,76829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[73726,70185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[70257,95516,72997,74710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[70452,90818,72006,76979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[72999],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[98822,73523,99563,89185,72353,76966,109405,89186,95446,90114,73851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[87882,87885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[107884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[95794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[72675,70626,76530,71309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[105906,105907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[72522,96923,73322,78516,99166,72182,95306,70849,83603,77129,91036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic cations within a cell. 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id: GO:0030769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + macrocin = S-adenosyl-L-homocysteine + H+ + tylosin.","definition_xrefs":["RHEA:17269","EC:2.1.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"macrocin O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02858","MetaCyc:MACROCIN-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine-macrocin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:macrocin 3'''-O-methyltransferase activity","type":"related"},{"name":"macrocin methyltransferase activity","type":"related"}],"termid":"GO:0030769"}


id: GO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity.","definition_xrefs":["PMID:9016303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"group III metabotropic glutamate receptor activity","termid":"GO:0001642"}


id: PBO:0013840
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidative Stress-induced Reductase","termid":"PBO:0013840"}


id: PBO:0076941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tissue factor pathway inhibitor 2","termid":"PBO:0076941"}


id: PATO:0000892
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility quality inhering in a female by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"PATO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female sterile","synonyms":[{"name":"female infertile","type":"related"}],"termid":"PATO:0000892"}


id: SO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation, where it increases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_induced","termid":"SO:0000125"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_autoregulated","synonyms":[{"name":"positively autoregulated","type":"exact"}],"termid":"SO:0000475"}


id: PBO:0072485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 14","termid":"PBO:0072485"}


id: PBO:0030696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione-disulfide_reductase_activity","termid":"PBO:0030696"}


id: PR:Q9HGL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sum2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sum2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.09","synonyms":[{"name":"Spom972h-sum2","type":"exact"}],"termid":"PR:Q9HGL3"}


id: PBO:0017034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio2 (predicted)","termid":"PBO:0017034"}


id: PBO:0005094
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human hAGO2","termid":"PBO:0005094"}


id: GO:1902464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K27 trimethylation.","definition_xrefs":["GOC:TermGenie","PMID:19270745"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K27 trimethylation (obsolete GO:1902464)","termid":"GO:1902464"}


id: GO:0046482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving para-aminobenzoic acid, an intermediate in the synthesis of folic acid, a compound which some organisms, e.g. prokaryotes, eukaryotic microbes, and plants, can synthesize de novo. Others, notably mammals, cannot. In yeast, it is present as a factor in the B complex of vitamins.","definition_xrefs":["PMID:11960743","PMID:11377864","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"para-aminobenzoic acid metabolic process","synonyms":[{"name":"4-aminobenzoic acid metabolic process","type":"exact"},{"name":"4-aminobenzoic acid metabolism","type":"exact"},{"name":"PABA metabolic process","type":"exact"},{"name":"PABA metabolism","type":"exact"},{"name":"p-aminobenzoic acid metabolic process","type":"exact"},{"name":"p-aminobenzoic acid metabolism","type":"exact"},{"name":"para-aminobenzoic acid metabolism","type":"exact"},{"name":"vitamin Bx metabolic process","type":"exact"},{"name":"vitamin Bx metabolism","type":"exact"}],"termid":"GO:0046482"}


id: PBO:0074266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC5-SMC6 complex localization factor 1","termid":"PBO:0074266"}


id: PBO:0064703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 39","termid":"PBO:0064703"}


id: PBO:0062489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 5 pseudogene","termid":"PBO:0062489"}


id: PBO:0073936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 8","termid":"PBO:0073936"}


id: GO:0036094
data:
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id: PBO:0078440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 6-1","termid":"PBO:0078440"}


id: PBO:0072937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 17","termid":"PBO:0072937"}


id: PBO:0059178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose receptor C-type 1","termid":"PBO:0059178"}


id: FYPO:0001241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing anisomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on anisomycin","synonyms":[{"name":"normal cell population growth in presence of anisomycin","type":"exact"},{"name":"normal cell population growth on anisomycin","type":"exact"},{"name":"normal cellular response to anisomycin","type":"related"},{"name":"normal vegetative cell population growth on anisomycin","type":"exact"}],"termid":"FYPO:0001241"}


id: PBO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase (predicted)","termid":"PBO:0000964"}


id: PBO:0079493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC12 antisense RNA 1","termid":"PBO:0079493"}


id: PBO:0058155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4450","termid":"PBO:0058155"}


id: GO:0033003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell activation","termid":"GO:0033003"}


id: PBO:0090667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mmm1","termid":"PBO:0090667"}


id: PBO:0080369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanin 3, pseudogene","termid":"PBO:0080369"}


id: GO:0045450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which bicoid mRNA is transported to and maintained within the oocyte as part of the specification of the anterior/posterior axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bicoid mRNA localization","synonyms":[{"name":"bicoid mRNA localisation","type":"exact"},{"name":"establishment and maintenance of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045450"}


id: FYPO:0004745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003097"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0004170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abolished histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at centromere outer repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004745"}


id: PR:O60125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bag101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.11c","synonyms":[{"name":"BAG-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bag101","type":"exact"}],"termid":"PR:O60125"}


id: PBO:0079585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D1","termid":"PBO:0079585"}


id: GO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the tricuspid valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"tricuspid valve development","termid":"GO:0003175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve morphogenesis","termid":"GO:0003186"}


id: PBO:0001369
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates pcl1","termid":"PBO:0001369"}


id: PBO:0052851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-7","termid":"PBO:0052851"}


id: PBO:0068275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASE11 and RNASE12 antisense RNA 1","termid":"PBO:0068275"}


id: PBO:0056733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 2","termid":"PBO:0056733"}


id: PBO:0081998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 31","termid":"PBO:0081998"}


id: PBO:0071874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 12","termid":"PBO:0071874"}


id: GO:0048701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase.","definition_xrefs":["GOC:dsf","GOC:jid","PMID:16049113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system morphogenesis","termid":"GO:0048704"},{"relation_name":"part_of","term_name":"cranial skeletal system development","termid":"GO:1904888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic cranial skeleton morphogenesis","synonyms":[{"name":"embryonic cranium morphogenesis","type":"exact"}],"termid":"GO:0048701"}


id: PBO:0028660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_binding","termid":"PBO:0028660"}


id: PBO:0028952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_cell_during_recovery_from_stationary_phase","termid":"PBO:0028952"}


id: PBO:0052805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 72","termid":"PBO:0052805"}


id: GO:0102212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-4-deoxy-Delta(4)-GlcpA-(1->3)-beta-D-GalpNAc6S + H2O = 5-dehydro-4-deoxy-D-glucuronate + N-acetyl-beta-D-galactosamine 6-sulfate.","definition_xrefs":["GOC:pz","EC:3.2.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"unsaturated chondroitin disaccharide hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12177","RHEA:31647"],"termid":"GO:0102212"}


id: PBO:0048640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 10","termid":"PBO:0048640"}


id: PBO:0059141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 8","termid":"PBO:0059141"}


id: PBO:0044598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 6","termid":"PBO:0044598"}


id: PBO:0003832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein (predicted)","termid":"PBO:0003832"}


id: GO:1901609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"negatively_regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of vesicle transport along microtubule","synonyms":[{"name":"down regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down regulation of vesicle transport along microtubule","type":"exact"},{"name":"down-regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down-regulation of vesicle transport along microtubule","type":"exact"},{"name":"downregulation of microtubule-based vesicle localization","type":"exact"},{"name":"downregulation of vesicle transport along microtubule","type":"exact"},{"name":"inhibition of microtubule-based vesicle localization","type":"exact"},{"name":"inhibition of vesicle transport along microtubule","type":"narrow"},{"name":"negative regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901609"}


id: PBO:0047498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog C","termid":"PBO:0047498"}


id: PBO:0030798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030798"}


id: GO:0071653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"negative regulation of CCL1 production","type":"exact"},{"name":"negative regulation of T cell activation 3 production","type":"exact"},{"name":"negative regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071653"}


id: PBO:0086683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology to <i>Ashbya gossypii</i>","termid":"PBO:0086683"}


id: PBO:0108996
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submitter_comment","termid":"PBO:0108996"}


id: PBO:0059488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B3","termid":"PBO:0059488"}


id: GO:0009603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism, is received and converted into a molecular signal.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"},{"relation_name":"is_a","term_name":"response to symbiotic fungus","termid":"GO:0009610"},{"relation_name":"is_a","term_name":"detection of fungus","termid":"GO:0016046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiotic fungus","synonyms":[{"name":"detection of symbiotic fungi","type":"exact"},{"name":"perception of symbiotic fungi","type":"related"},{"name":"perception of symbiotic fungus","type":"related"}],"termid":"GO:0009603"}


id: PBO:0066774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 72","termid":"PBO:0066774"}


id: PATO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coiling which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coiled","termid":"PATO:0000404"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased coiling","synonyms":[{"name":"low coiling","type":"exact"}],"termid":"PATO:0001796"}


id: GO:0021688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar molecular layer. This process pertains to the initial formation of a structure from unspecified parts. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:dph","ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer formation","termid":"GO:0021688"}


id: PBO:0059676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 42","termid":"PBO:0059676"}


id: GO:1904447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of folic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:19762432","GOC:BHF","GO_REF:0000075","GOC:hal","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"folate import across plasma membrane","synonyms":[{"name":"folate import into cell","type":"exact"},{"name":"folic acid import across plasma membrane","type":"related"}],"termid":"GO:1904447"}


id: PBO:0030275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_targeting_to_vacuole","termid":"PBO:0030275"}


id: PBO:0088148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter that mediates zinc transport into the vacuole; overexpression confers resistance to cobalt and rhodium; protein abundance increases in response to DNA replication stress; COT1 has a paralog, ZRC1, that arose from the whole genome duplication","termid":"PBO:0088148"}


id: GO:0005654
data:
  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id: GO:0042132
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id: PBO:0005813
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id: GO:0033881
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id: PBO:0016911
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id: PBO:0036406
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id: PBO:0064080
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id: GO:0019600
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id: MOD:01609
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id: PBO:0063670
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id: PBO:0051309
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id: GO:0019247
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id: PBO:0074439
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id: GO:0046681
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id: GO:0031426
data:
  {"annotated_genes":["SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"}]},"cv_name":"biological_process","definition":"The conversion of a primary mRNA transcript containing more than one complete protein-coding region into individual mature mRNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"polycistronic mRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031426","terms_by_termid":{"GO:0140040":null}}


id: PBO:0065458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 4 pseudogene 1","termid":"PBO:0065458"}


id: PBO:0063438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6A","termid":"PBO:0063438"}


id: PBO:0026779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0026779"}


id: MOD:00333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine.","definition_xrefs":["RESID:AA0328","Unimod:437#C-term","PubMed:8183363","PubMed:7835418","PubMed:7559516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine","synonyms":[{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine","type":"exact"},{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5-adenosine","type":"related"},{"name":"5'-O-[(3-aminopropoxy)(L-aspart-1-ylamino)phosphoryl]adenosine","type":"exact"},{"name":"9-(5'-O-[(3-aminopropoxy)(L-aspart-1-ylamino)phosphoryl]-beta-D-ribofuranosyl)adenine","type":"exact"},{"name":"C-Asn-deriv","type":"related"},{"name":"MOD_RES Aspartic acid 1-[(3-aminopropyl)(5'-adenosyl)phosphono]amide","type":"exact"},{"name":"N-(aspart-1-yl)-O-(3-aminopropyl)-O-(5'-adenosyl)phosphoramide","type":"exact"},{"name":"microcin C7 asparagine modification","type":"exact"}],"termid":"MOD:00333"}


id: GO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that reduces the concentration of calcium in the ER.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium in ER (obsolete GO:0045783)","synonyms":[{"name":"negative regulation of calcium in ER","type":"exact"}],"termid":"GO:0045783"}


id: PR:P36623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.06","secondary_identifiers":["UniProtKB:P36623"],"synonyms":[{"name":"BPG-dependent PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphoglyceromutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.06","type":"related"},{"name":"Spom972h-gpmA","type":"exact"}],"termid":"PR:P36623"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: PBO:0027539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_S-phase_DNA_damage_checkpoint_signaling","termid":"PBO:0027539"}


id: PBO:0029947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029947"}


id: PBO:0004515
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-like protein Regulated via Splicing","termid":"PBO:0004515"}


id: PBO:0091165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein Nce101","termid":"PBO:0091165"}


id: PBO:0041852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 2","termid":"PBO:0041852"}


id: PBO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH-type zinc finger 1 pseudogene 1","termid":"PBO:0047698"}


id: GO:1905791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mechanosensory behavior.","definition_xrefs":["GOC:TermGenie","PMID:8692859","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of mechanosensory behavior","termid":"GO:1905790"},{"relation_name":"negatively_regulates","term_name":"mechanosensory behavior","termid":"GO:0007638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mechanosensory behavior","synonyms":[{"name":"down regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"down regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"down regulation of mechanosensory behavior","type":"exact"},{"name":"down regulation of mechanosensory behaviour","type":"exact"},{"name":"down-regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"down-regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"down-regulation of mechanosensory behavior","type":"exact"},{"name":"down-regulation of mechanosensory behaviour","type":"exact"},{"name":"downregulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"downregulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"downregulation of mechanosensory behavior","type":"exact"},{"name":"downregulation of mechanosensory behaviour","type":"exact"},{"name":"inhibition of behavioral response to mechanical stimulus","type":"narrow"},{"name":"inhibition of behavioural response to mechanical stimulus","type":"narrow"},{"name":"inhibition of mechanosensory behavior","type":"narrow"},{"name":"inhibition of mechanosensory behaviour","type":"narrow"},{"name":"negative regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"negative regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"negative regulation of mechanosensory behaviour","type":"exact"}],"termid":"GO:1905791"}


id: GO:0016485
data:
  {"annotated_genes":["SJAG_03648","SJAG_03737","SJAG_02432","SJAG_03121","SJAG_01896","SJAG_01868","SJAG_02809","SJAG_03524","SJAG_03315","SJAG_04641","SJAG_01471","SJAG_02980","SJAG_06636","SJAG_00730","SJAG_05351","SJAG_01750","SJAG_02565","SJAG_02033","SJAG_03396","SJAG_04533","SJAG_02214","SJAG_04514","SJAG_02867","SJAG_04785","SJAG_02397","SJAG_03386","SJAG_01179","SJAG_04398","SJAG_01430","SJAG_00181","SJAG_01004","SJAG_01838","SJAG_03261","SJAG_01283","SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75695,84665,95526,98536,100960,101333,105180],"is_not":false,"summary":null,"term":"GO:0016485"},{"annotations":[69939,74011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071586"},{"annotations":[67293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016539"},{"annotations":[76039,96331,83804,76772,98329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034982"},{"annotations":[91780,99588,90047,88595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016540"},{"annotations":[78531,76949,78353,75671,97474,69843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006627"},{"annotations":[104352,107653,73211,75245,106108,83224,103259,93753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006465"},{"annotations":[75568,72089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006624"},{"annotations":[92978,83051,87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein. Protein maturation is the process leading to the attainment of the full functional capacity of a protein.","definition_xrefs":["GOC:curators","GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00730":null,"SJAG_01004":null,"SJAG_01179":null,"SJAG_01283":null,"SJAG_01430":null,"SJAG_01471":null,"SJAG_01750":null,"SJAG_01838":null,"SJAG_01868":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_02214":null,"SJAG_02397":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03121":null,"SJAG_03261":null,"SJAG_03315":null,"SJAG_03386":null,"SJAG_03396":null,"SJAG_03524":null,"SJAG_03648":null,"SJAG_03737":null,"SJAG_04398":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04785":null,"SJAG_05351":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"protein processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051605"],"synonyms":[{"name":"peptidolysis during protein maturation","type":"related"},{"name":"protein maturation by peptide bond cleavage","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis","type":"exact"},{"name":"protein maturation by proteolysis","type":"related"}],"termid":"GO:0016485","terms_by_termid":{"GO:0006465":null,"GO:0006624":null,"GO:0006627":null,"GO:0016485":null,"GO:0016539":null,"GO:0016540":null,"GO:0031638":null,"GO:0034982":null,"GO:0071586":null}}


id: GO:0099006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into a host cell, following endocytosis, via permeabilization of the endosomal membrane by membrane penetration protein(s) of the symbiont. This process mediates the entry of some non-enveloped virus into eukaryotic cells. In some cases, viral membrane-penetration protein requires to be activated to display its membrane penetrating activity. Activation can be due to receptor binding or the acidic pH of the endosomal lumen.","definition_xrefs":["PMID:15329727","PMID:25055856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of endosomal membrane","synonyms":[{"name":"viral entry via permeabilization of endosomal membrane","type":"narrow"}],"termid":"GO:0099006"}


id: PBO:0031877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53 (predicted)","termid":"PBO:0031877"}


id: PBO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0000457"}


id: PBO:0056821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 13A","termid":"PBO:0056821"}


id: GO:0160065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex associated with the mitotic spindle pole body during interphase and mitosis and comprises of the proteins of the septation initiation signaling network (SIN) of fission yeast or mitotic exit network (MEN) of budding yeast, organized by two scaffold/adaptor proteins.","definition_xrefs":["PMID:22684255","PMID:21131906","PMID:22525225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer plaque of mitotic spindle pole body","termid":"GO:0061499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"SIN/MEN signaling complex","synonyms":[{"name":"Hippo signaling complex","type":"narrow"},{"name":"MEN signaling complex","type":"narrow"},{"name":"SIN signaling complex","type":"narrow"},{"name":"SIN/MEN signalling complex","type":"exact"}],"termid":"GO:0160065"}


id: PBO:0086917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc-cluster transcription factor; involved in utilization of iron-transporting siderophore pulcherrimin","termid":"PBO:0086917"}


id: PBO:0034584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity_during_G0_to_G1_transition","termid":"PBO:0034584"}


id: PBO:0091163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Dph1/Dsk2","termid":"PBO:0091163"}


id: PR:O74359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 60 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.02","synonyms":[{"name":"Spom972h-SPBC28E12.02","type":"exact"}],"termid":"PR:O74359"}


id: PBO:0057651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-4","termid":"PBO:0057651"}


id: PBO:0005288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, implicated in translation","termid":"PBO:0005288"}


id: PBO:0080565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and coiled coil containing","termid":"PBO:0080565"}


id: PBO:0041557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 47","termid":"PBO:0041557"}


id: GO:0099539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of neuropeptides contained within a dense core vesicle by fusion of the granule with the presynaptic membrane, stimulated by a rise in cytosolic calcium ion concentration.","definition_xrefs":["PMID:17553987","PMID:24653208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"is_a","term_name":"presynaptic dense core vesicle exocytosis","termid":"GO:0099525"},{"relation_name":"part_of","term_name":"synaptic signaling via neuropeptide","termid":"GO:0099538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"neuropeptide secretion from presynapse","synonyms":[{"name":"neuropeptide secretion from presynapse via dense core granule exocytosis","type":"exact"}],"termid":"GO:0099539"}


id: GO:0021514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:11262869","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"ventral spinal cord development","termid":"GO:0021517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron differentiation","termid":"GO:0021514"}


id: GO:1990156
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DnaB helicase, and DnaG (a primase). Facilitates the unwinding of double-stranded DNA and the synthesis of RNA primer sequences during DNA replication and repair in Prokaryotes.","definition_xrefs":["GOC:bhm","PMID:14557266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"part_of","term_name":"core primosome complex","termid":"GO:1990098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"DnaB-DnaG complex","synonyms":[{"name":"DnaB-DnaG primosome complex","type":"related"}],"termid":"GO:1990156"}


id: PBO:0055888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8D divergent transcript","termid":"PBO:0055888"}


id: PBO:0045356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in primary ciliary dyskinesia homolog (mouse)","termid":"PBO:0045356"}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["PMID:17161604","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: PBO:0084454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Sur1p; CSH1 has a paralog, SUR1, that arose from the whole genome duplication","termid":"PBO:0084454"}


id: GO:0009063
data:
  {"annotated_genes":["SJAG_04634","SJAG_00830","SJAG_02734","SJAG_02235","SJAG_01903","SJAG_00495","SJAG_02901","SJAG_03163","SJAG_01271","SJAG_00714","SJAG_03743","SJAG_04827","SJAG_02496","SJAG_00674","SJAG_02309","SJAG_03641","SJAG_03861","SJAG_02450","SJAG_03398","SJAG_00881","SJAG_04842","SJAG_03434","SJAG_00937","SJAG_00944","SJAG_01019","SJAG_03290","SJAG_03293","SJAG_00832","SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[108290,77037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[70947,71406,73220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[101193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[70890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[78616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[77469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[113339,77970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[87157,83018,83977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"},{"annotations":[96477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006543"},{"annotations":[93205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[76686,73475,91769,83003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[106342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[107175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[76258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006565"},{"annotations":[98878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[88192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006562"},{"annotations":[70170,76804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[71859,76259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[72502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00674":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00832":null,"SJAG_00881":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01019":null,"SJAG_01271":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02309":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02734":null,"SJAG_02901":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03293":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_04145":null,"SJAG_04634":null,"SJAG_04827":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid breakdown","type":"exact"},{"name":"amino acid catabolism","type":"exact"},{"name":"amino acid degradation","type":"exact"},{"name":"cellular amino acid catabolic process","type":"exact"}],"termid":"GO:0009063","terms_by_termid":{"GO:0000949":null,"GO:0006530":null,"GO:0006533":null,"GO:0006538":null,"GO:0006540":null,"GO:0006543":null,"GO:0006546":null,"GO:0006562":null,"GO:0006565":null,"GO:0006567":null,"GO:0006574":null,"GO:0010121":null,"GO:0010133":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0019547":null,"GO:0033512":null,"GO:0036088":null,"GO:0042853":null,"GO:0052707":null}}


id: PBO:0076184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase modifying factor 2","termid":"PBO:0076184"}


id: PBO:0057052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 138-1","termid":"PBO:0057052"}


id: SO:1000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An umbrella term for terms describing an effect of a sequence variation on the frame of translation.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000064 sequence_variation_affecting_reading_frame (obsolete SO:1000064)","synonyms":[{"name":"mutation affecting reading frame","type":"exact"},{"name":"sequence variation affecting reading frame","type":"related"}],"termid":"SO:1000064"}


id: PBO:0076685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCEAL3 antisense RNA 1","termid":"PBO:0076685"}


id: PR:Q7Z9I5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf7 gene.","definition_xrefs":["UniProtKB:Q7Z9I5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.05","synonyms":[{"name":"Spom972h-wtf7","type":"exact"}],"termid":"PR:Q7Z9I5"}


id: PBO:0089244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1","termid":"PBO:0089244"}


id: PATO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radioactivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"radioactive","termid":"PATO:0001741"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased radioactivity","synonyms":[{"name":"high radioactivity","type":"exact"}],"termid":"PATO:0001742"}


id: GO:0030598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the N-glycosylic bond at A-4324 in 28S rRNA from rat ribosomes or corresponding sites in 28S RNA from other species.","definition_xrefs":["GOC:mah","EC:3.2.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA glycosylase activity","termid":"GO:0030597"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a rRNA","termid":"GO:0140102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rRNA N-glycosylase activity","secondary_identifiers":["MetaCyc:3.2.2.22-RXN"],"synonyms":[{"name":"RNA N-glycosidase activity","type":"related"},{"name":"gelonin","type":"related"},{"name":"mirabilis antiviral protein","type":"related"},{"name":"momorcochin-S","type":"related"},{"name":"nigrin b","type":"related"},{"name":"rRNA N-glycohydrolase activity","type":"related"},{"name":"rRNA N-glycosidase activity","type":"exact"},{"name":"ribosomal ribonucleate N-glycosidase activity","type":"related"},{"name":"ricin","type":"related"},{"name":"saporins","type":"related"}],"termid":"GO:0030598"}


id: PBO:0029025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_gamma-tubulin_complex_assembly","termid":"PBO:0029025"}


id: GO:0043954
data:
  {"annotated_genes":["SJAG_03812","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071788"},{"annotations":[85497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902406"}]},"cv_name":"biological_process","definition":"The organization process that preserves a cellular component in a stable functional or structural state.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular component maintenance","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0071956"],"synonyms":[{"name":"cellular component maintenance at cellular level","type":"exact"}],"termid":"GO:0043954","terms_by_termid":{"GO:0071788":null,"GO:1902406":null}}


id: PBO:0057349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 544a","termid":"PBO:0057349"}


id: GO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-25 of any form of vitamin D.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vitamin D 25-hydroxylase activity","synonyms":[{"name":"calciferol 25-hydroxylase activity","type":"narrow"},{"name":"cholecalciferol 25-hydroxylase activity","type":"narrow"},{"name":"ergocalciferol 25-hydroxylase activity","type":"narrow"},{"name":"vitamin D2 25-hydroxylase activity","type":"narrow"}],"termid":"GO:0070643"}


id: GO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a vascular endothelial growth factor receptor-2 (VEGFR-2) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:uh","PMID:12967471","Wikipedia:Kinase_insert_domain_receptor","Wikipedia:VEGF_receptors","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor-2 signaling pathway","synonyms":[{"name":"FLK-1 signaling pathway","type":"exact"},{"name":"KDR signaling pathway","type":"exact"},{"name":"VEGFR-2 signaling pathway","type":"exact"},{"name":"VEGFR2 signaling pathway","type":"exact"}],"termid":"GO:0036324"}


id: PBO:0050799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 7","termid":"PBO:0050799"}


id: FYPO:0004487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased protein acetylation during vegetative growth","synonyms":[{"name":"increased protein acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004487"}


id: FYPO:0004450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to calcium ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to calcium","type":"exact"},{"name":"normal protein phosphorylation during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004450"}


id: PBO:0081781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 708","termid":"PBO:0081781"}


id: GO:1990964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex probably required for the internalization of endosomes during actin-coupled endocytosis. Links the site of endocytosis to the cell membrane-associated actin cytoskeleton, coordinating ARP2/3 stimulation at the later stages of endocytosis. Present in the late endocytic coat.","definition_xrefs":["PMID:10594004","PMID:11739778","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex","termid":"GO:1990964"}


id: PBO:0045164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 4","termid":"PBO:0045164"}


id: GO:0048843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axon extension involved in axon guidance.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon extension","termid":"GO:0030517"},{"relation_name":"is_a","term_name":"regulation of axon extension involved in axon guidance","termid":"GO:0048841"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"negatively_regulates","term_name":"axon extension involved in axon guidance","termid":"GO:0048846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axon extension involved in axon guidance","synonyms":[{"name":"down regulation of axon extension involved in axon guidance","type":"exact"},{"name":"down-regulation of axon extension involved in axon guidance","type":"exact"},{"name":"downregulation of axon extension involved in axon guidance","type":"exact"},{"name":"inhibition of axon extension involved in axon guidance","type":"narrow"}],"termid":"GO:0048843"}


id: GO:0097011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:ebc","GOC:BHF","PMID:7901744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to granulocyte macrophage colony-stimulating factor","termid":"GO:0097012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to granulocyte macrophage colony-stimulating factor stimulus","synonyms":[{"name":"cellular response to GM-CSF stimulus","type":"exact"}],"termid":"GO:0097011"}


id: FYPO:0006171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle elongation takes place during anaphase A. Normally, the spindle elongates immediately following assembly during prophase, remains at a static length during metaphase and anaphase A, and elongates further during anaphase B.","definition_xrefs":["PMID:21920317","PomBase:mah","PMID:9802907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic spindle elongation","termid":"FYPO:0005417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000641","FYPO:0000054","FYPO:0000002","FYPO:0000337","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mitotic spindle elongation during anaphase A","synonyms":[{"name":"abnormal mitotic spindle elongation during anaphase A","type":"exact"},{"name":"mitotic spindle elongation during anaphase A during vegetative growth","type":"exact"},{"name":"mitotic spindle extension during anaphase A","type":"exact"},{"name":"premature mitotic spindle elongation during anaphase","type":"related"},{"name":"spindle elongation during anaphase A during mitotic cell cycle","type":"related"},{"name":"spindle elongation during mitotic anaphase A","type":"exact"}],"termid":"FYPO:0006171"}


id: GO:0045695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of embryo sac egg cell differentiation","termid":"GO:0045694"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryo sac egg cell differentiation","synonyms":[{"name":"down regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"down-regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"downregulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"inhibition of female gametophyte egg cell differentiation","type":"narrow"},{"name":"negative regulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045695"}


id: FYPO:0002593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation occurs to a lower extent than normal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced histone phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002593"}


id: PBO:0081226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 5","termid":"PBO:0081226"}


id: PBO:0088363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Greatwall kinase Ppk18","termid":"PBO:0088363"}


id: PBO:0048933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi phosphoprotein 3 like","termid":"PBO:0048933"}


id: PBO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Ybt1","termid":"PBO:0002529"}


id: PBO:0043667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10A","termid":"PBO:0043667"}


id: PBO:0055740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox transcription factor 1 alpha","termid":"PBO:0055740"}


id: GO:0043075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The nucleus of a plant pollen cell, the male gamete, and its descendents.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm cell nucleus (sensu Magnoliophyta) (obsolete GO:0043075)","synonyms":[{"name":"pollen germ cell nucleus","type":"exact"},{"name":"pollen germ-cell nucleus","type":"exact"},{"name":"sperm cell nucleus (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0043075"}


id: PBO:0088381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase (glutamine hydrolysing)","termid":"PBO:0088381"}


id: PBO:0034489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_reverse_centromeric_outer_repeat_transcript_level","termid":"PBO:0034489"}


id: SO:1000023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a purine nucleotide, A or G , into a pyrimidine nucleotide C or T.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine_to_pyrimidine_transversion","synonyms":[{"name":"purine to pyrimidine transversion","type":"exact"}],"termid":"SO:1000023"}


id: PBO:0051541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor","termid":"PBO:0051541"}


id: GO:0035767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["CL:0000115","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis","termid":"GO:0035767"}


id: FYPO:0004681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature polyadenylated 5.8S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature 5.8S rRNA level","termid":"FYPO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased polyadenylated 5.8S rRNA level","synonyms":[{"name":"decreased 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature polyadenylated 5.8S rRNA transcript level","type":"exact"},{"name":"decreased polyadenylated 5.8S rRNA accumulation","type":"related"},{"name":"decreased polyadenylated 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased polyadenylated 5.8S rRNA transcript level","type":"exact"},{"name":"reduced polyadenylated 5.8S rRNA level","type":"exact"}],"termid":"FYPO:0004681"}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: GO:0072029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a long nephron over time, from its formation to the mature structure. Long nephrons are associated with juxtamedullary glomeruli and extend into the inner medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long nephron development","synonyms":[{"name":"juxtamedullary nephron development","type":"related"}],"termid":"GO:0072029"}


id: PBO:0066147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 3","termid":"PBO:0066147"}


id: GO:0047610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylsalicylate + H2O = acetate + H+ + salicylate.","definition_xrefs":["RHEA:11752","EC:3.1.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0019213","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylsalicylate deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLSALICYLATE-DEACETYLASE-RXN","KEGG_REACTION:R02942"],"synonyms":[{"name":"acetylsalicylate O-acetylhydrolase activity","type":"related"},{"name":"acetylsalicylic acid esterase activity","type":"related"},{"name":"aspirin esterase activity","type":"related"},{"name":"aspirin hydrolase activity","type":"related"}],"termid":"GO:0047610"}


id: GO:0002732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"positively_regulates","term_name":"dendritic cell cytokine production","termid":"GO:0002371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of dendritic cell cytokine production","synonyms":[{"name":"activation of dendritic cell cytokine production","type":"narrow"},{"name":"stimulation of dendritic cell cytokine production","type":"narrow"},{"name":"up regulation of dendritic cell cytokine production","type":"exact"},{"name":"up-regulation of dendritic cell cytokine production","type":"exact"},{"name":"upregulation of dendritic cell cytokine production","type":"exact"}],"termid":"GO:0002732"}


id: PBO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase_A","termid":"PBO:0030051"}


id: GO:1901490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphangiogenesis","synonyms":[{"name":"regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901490"}


id: MOD:00799
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-galactosyl-L-cysteine.","definition_xrefs":["PubMed:11945907","RESID:AA0392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"galactosylated residue","termid":"MOD:00476"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"S-galactosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(D-galactopyranosylsulfanyl)propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (Gal) cysteine","type":"exact"},{"name":"S-(beta-D-galactopyranosyl)cysteine","type":"exact"},{"name":"S-galactosyl-L-cysteine","type":"exact"},{"name":"S-glycosyl-cysteine","type":"exact"},{"name":"SGalCys","type":"exact"}],"termid":"MOD:00799"}


id: GO:0048481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ovule over time, from its formation to the mature structure. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"plant-type ovary development","termid":"GO:0035670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule development","termid":"GO:0048481"}


id: GO:1904608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium L-glutamate stimulus.","definition_xrefs":["GO_REF:0000071","PMID:21389115","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to monosodium L-glutamate (obsolete GO:1904608)","termid":"GO:1904608"}


id: PBO:0038757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 2","termid":"PBO:0038757"}


id: PBO:0028709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0028709"}


id: PBO:0069956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1249, pseudogene","termid":"PBO:0069956"}


id: GO:1905688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GO_REF:0000059","PMID:23091060","GOC:bc","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid kinase activity","termid":"GO:0090219"},{"relation_name":"is_a","term_name":"regulation of diacylglycerol kinase activity","termid":"GO:1905687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of diacylglycerol kinase activity","synonyms":[{"name":"negative regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"down regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"down regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"down regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"down regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"down regulation of DG kinase activity","type":"exact"},{"name":"down regulation of DGK activity","type":"exact"},{"name":"down regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"down regulation of diglyceride kinase activity","type":"exact"},{"name":"down regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"down-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"down-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"down-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"down-regulation of DG kinase activity","type":"exact"},{"name":"down-regulation of DGK activity","type":"exact"},{"name":"down-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"down-regulation of diglyceride kinase activity","type":"exact"},{"name":"down-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"downregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"downregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"downregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"downregulation of DG kinase activity","type":"exact"},{"name":"downregulation of DGK activity","type":"exact"},{"name":"downregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"downregulation of diglyceride kinase activity","type":"exact"},{"name":"downregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"inhibition of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"inhibition of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"inhibition of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"inhibition of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of DG kinase activity","type":"narrow"},{"name":"inhibition of DGK activity","type":"narrow"},{"name":"inhibition of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"inhibition of diglyceride kinase activity","type":"narrow"},{"name":"inhibition of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"negative regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"negative regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"negative regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"negative regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"negative regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"negative regulation of DG kinase activity","type":"exact"},{"name":"negative regulation of DGK activity","type":"exact"},{"name":"negative regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"negative regulation of diglyceride kinase activity","type":"exact"},{"name":"negative regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905688"}


id: GO:0044089
data:
  {"annotated_genes":["SJAG_02169","SJAG_00514","SJAG_02671","SJAG_01188","SJAG_05290","SJAG_01805","SJAG_04509","SJAG_00082","SJAG_03453","SJAG_04666","SJAG_01837","SJAG_03631","SJAG_02332","SJAG_03936","SJAG_01794","SJAG_04468","SJAG_02379","SJAG_03342","SJAG_02990","SJAG_04776","SJAG_04597","SJAG_01114","SJAG_03241","SJAG_03048","SJAG_03704"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[94287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[97639,111689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[85373,83466,86325,88897,106473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[76634,101587,89218,85374,110495,112868,87851,102238,108447,100391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[106543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[89815,87852,83109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[84982,88914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090070"},{"annotations":[105651,85506,89223,83110,97649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01794":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02379":null,"SJAG_02671":null,"SJAG_02990":null,"SJAG_03048":null,"SJAG_03241":null,"SJAG_03342":null,"SJAG_03453":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular component biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044089","terms_by_termid":{"GO:0031031":null,"GO:0031453":null,"GO:0090070":null,"GO:0110161":null,"GO:0140281":null,"GO:1902917":null,"GO:1903024":null,"GO:1905561":null,"GO:1905758":null}}


id: GO:0140242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation at postsynapse","termid":"GO:0140242"}


id: GO:1902616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acyl carnitine is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl carnitine transport","termid":"GO:0006844"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"acyl carnitine transmembrane transport","synonyms":[{"name":"O-acylcarnitine transmembrane transport","type":"exact"}],"termid":"GO:1902616"}


id: PBO:0060829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN3 antisense RNA 1","termid":"PBO:0060829"}


id: PBO:0038802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM7, ADAMDEC1 and ADAM28 antisense RNA 1","termid":"PBO:0038802"}


id: FYPO:0002099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during cellular response to HU","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002099"}


id: PBO:0074091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 6","termid":"PBO:0074091"}


id: GO:0006500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein lipidation","termid":"GO:0006498"},{"relation_name":"is_a","term_name":"protein palmitoylation","termid":"GO:0018345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal protein palmitoylation","termid":"GO:0006500"}


id: GO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the dorsal motor nucleus of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve structural organization","synonyms":[{"name":"dorsal motor nucleus of vagus nerve structural organisation","type":"exact"}],"termid":"GO:0035763"}


id: GO:1904178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adipose tissue development.","definition_xrefs":["GOC:TermGenie","PMID:23081848","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adipose tissue development","termid":"GO:1904177"},{"relation_name":"negatively_regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adipose tissue development","synonyms":[{"name":"down regulation of adipogenesis","type":"related"},{"name":"down regulation of adipose tissue development","type":"exact"},{"name":"down-regulation of adipogenesis","type":"related"},{"name":"down-regulation of adipose tissue development","type":"exact"},{"name":"downregulation of adipogenesis","type":"related"},{"name":"downregulation of adipose tissue development","type":"exact"},{"name":"inhibition of adipogenesis","type":"related"},{"name":"inhibition of adipose tissue development","type":"narrow"},{"name":"negative regulation of adipogenesis","type":"related"}],"termid":"GO:1904178"}


id: GO:0050152
data:
  {"annotated_genes":["SJAG_02276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72052],"is_not":false,"summary":null,"term":"GO:0050152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a monoamide of a dicarboxylic acid + H2O = a dicarboxylate + NH3.","definition_xrefs":["EC:3.5.1.3","MetaCyc:OMEGA-AMIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"omega-amidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:11716"],"synonyms":[{"name":"alpha-keto acid-omega-amidase activity","type":"related"},{"name":"omega-amidodicarboxylate amidohydrolase activity","type":"related"},{"name":"w-amidase activity","type":"exact"}],"termid":"GO:0050152","terms_by_termid":{"GO:0050152":null}}


id: GO:0090436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf pavement cell development","termid":"GO:0090436"}


id: GO:0097070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis process in which the ductus arteriosus changes to no longer permit blood flow after birth. The ductus arteriosus is the shunt between the aorta and the pulmonary artery which allows blood to bypass the fetus' lungs.","definition_xrefs":["GOC:hw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ductus arteriosus closure","termid":"GO:0097070"}


id: GO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to tumor cell","termid":"GO:0002836"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response to tumor cell","synonyms":[{"name":"activation of immune response to tumor cell","type":"narrow"},{"name":"positive regulation of immune response to tumour cell","type":"exact"},{"name":"stimulation of immune response to tumor cell","type":"narrow"},{"name":"up regulation of immune response to tumor cell","type":"exact"},{"name":"up-regulation of immune response to tumor cell","type":"exact"},{"name":"upregulation of immune response to tumor cell","type":"exact"}],"termid":"GO:0002839"}


id: PR:Q10142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aur1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide synthase catalytic subunit aur1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.06","synonyms":[{"name":"IPC synthase catalytic subunit aur1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aur1","type":"exact"},{"name":"aureobasidin A resistance protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphatidylinositol:ceramide phosphoinositol transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10142"}


id: SO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a valine anticodon, and a 3' valine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"valine_tRNA_primary_transcript","termid":"SO:0000230"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valyl_tRNA","synonyms":[{"name":"valyl tRNA","type":"exact"},{"name":"valyl-transfer RNA","type":"related"},{"name":"valyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000273"}


id: GO:0019136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 2'-deoxynucleoside = ADP + 2'-deoxynucleoside 5'-phosphate.","definition_xrefs":["EC:2.7.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"deoxynucleoside kinase activity","secondary_identifiers":["MetaCyc:2.7.1.145-RXN","Reactome:R-HSA-74207","RHEA:12140"],"synonyms":[{"name":"ATP:deoxynucleoside 5'-phosphotransferase activity","type":"related"},{"name":"D. melanogaster deoxynucleoside kinase activity","type":"related"},{"name":"Dm-dNK","type":"related"},{"name":"Ms-dNK activity","type":"related"},{"name":"ms-dNK","type":"related"},{"name":"multifunctional deoxynucleoside kinase activity","type":"related"},{"name":"multispecific deoxynucleoside kinase activity","type":"related"},{"name":"multisubstrate deoxyribonucleoside kinase activity","type":"related"}],"termid":"GO:0019136"}


id: GO:1900531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in cellular response to heat.","definition_xrefs":["GOC:al","PMID:9135147","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in cellular response to heat (obsolete GO:1900531)","synonyms":[{"name":"regulation of cell shape involved in cellular response to heat","type":"exact"},{"name":"regulation of cell shape of cellular response to heat","type":"exact"},{"name":"regulation of cell shape of cellular response to heat stress","type":"exact"}],"termid":"GO:1900531"}


id: FYPO:0005452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost more frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PomBase:mah","PMID:17724078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased break-induced loss of heterozygosity","synonyms":[{"name":"increased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"increased break-induced loss of heterozygosity during vegetative growth","type":"exact"}],"termid":"FYPO:0005452"}


id: GO:0001651
data:
  {"annotated_genes":["SJAG_00259"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84359],"is_not":false,"summary":null,"term":"GO:0001651"}]},"cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"dense fibrillar component","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1841764412"],"synonyms":[{"name":"pars fibrosa","type":"broad"}],"termid":"GO:0001651","terms_by_termid":{"GO:0001651":null}}


id: FYPO:0002985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased RNA level during cellular response to MMS","type":"exact"},{"name":"increased RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"increased mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"increased transcript level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002985"}


id: PBO:0067647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 822, pseudogene","termid":"PBO:0067647"}


id: PBO:0073686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling threshold regulating transmembrane adaptor 1","termid":"PBO:0073686"}


id: GO:0032937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP), SREBP-cleavage-activating protein (SCAP), and an Insig protein (Insig-1 or Insig-2) in the ER membrane.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737","GO:0032991","GO:0005789"],"is_obsolete":false,"name":"SREBP-SCAP-Insig complex","termid":"GO:0032937"}


id: PBO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 1","termid":"PBO:0042068"}


id: PBO:0042350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD84 molecule","termid":"PBO:0042350"}


id: PBO:0085284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal NADP-dependent isocitrate dehydrogenase; catalyzes oxidation of isocitrate to alpha-ketoglutarate with the formation of NADP(H+), required for growth on unsaturated fatty acids; IDP3 has a paralog, IDP2, that arose from the whole genome duplication","termid":"PBO:0085284"}


id: FYPO:0006100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased, and some of the protein is present in the nucleus instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus","synonyms":[{"name":"decreased protein localisation to cytoplasm, with protein mislocalised to nucleus","type":"exact"},{"name":"decreased protein localization in cytoplasm, with protein mislocalized to nucleus","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm, with protein mislocalized to nucleus","type":"exact"}],"termid":"FYPO:0006100"}


id: GO:0160051
data:
  {"annotated_genes":["SJAG_00861","SJAG_00290","SJAG_04921"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86714,94206,102194],"is_not":false,"summary":null,"term":"GO:0160051"}]},"cv_name":"cellular_component","definition":"A corepressor complex containing the WD-repeat protein Tup1p (S. cerevisiae) and Tup11/Tup12 (fission yeast) and the TPR repeat protein Cyc8p (S. cerevisiae) ssn6 (fission yeast) that is recruited to target genes by DNA-bound repressor proteins preferentially at regions where histones are deacetylated by the Clr6 class I HDAC, and recruits the SWI/SNF and SAGA complexes to promoters.","definition_xrefs":["GOC:vw","PMID:17101775","PMID:22156212","PMID:10871883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00290":null,"SJAG_00861":null,"SJAG_04921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cyc8(Ssn6)-Tup1 general repressor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Tup11/Tup12 repressor complex","type":"exact"}],"termid":"GO:0160051","terms_by_termid":{"GO:0160051":null}}


id: PBO:0004495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumble family pantothenate kinase (predicted)","termid":"PBO:0004495"}


id: GO:0047276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP-galactose = alpha-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP.","definition_xrefs":["EC:2.4.1.87","MetaCyc:2.4.1.87-RXN","RHEA:13013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyllactosaminide 3-alpha-galactosyltransferase activity","secondary_identifiers":["GO:0003946","MetaCyc:2.4.1.151-RXN"],"synonyms":[{"name":"N-acetyllactosaminide alpha-1,3-galactosyltransferase activity","type":"exact"},{"name":"UDP-Gal:Gal-beta-1->4GlcNAc-R alpha-1->3-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:Galbeta1->4GlcNAc-R alpha1->3-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:N-acetyllactosaminide alpha(1,3)-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:N-acetyllactosaminide alpha-(1,3)-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:N-acetyllactosaminide alpha-1,3-D-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:beta-D-Gal(1,4)-D-GlcNAc alpha(1,3)-galactosyltransferase activity","type":"related"},{"name":"UDP-Gal:beta-D-Gal(1,4)-D-GlcNAc alpha-(1,3)-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-acetyllactosamine alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyllactosaminide 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:beta-D-galactosyl-beta-1,4-N-acetyl-D-glucosaminyl-glycopeptide alpha-1,3-D-galactosyltransferase activity","type":"related"},{"name":"alpha-galactosyltransferase activity","type":"related"},{"name":"beta-D-galactosyl-N-acetylglucosaminylglycopeptide alpha-1,3-galactosyltransferase activity","type":"related"},{"name":"beta-galactosyl-N-acetylglucosaminylglycopeptide alpha-1,3-galactosyltransferase activity","type":"exact"},{"name":"glucosaminylglycopeptide alpha-1,3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-acetyllactosamine alpha-1->3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-acetyllactosamine alpha1->3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-acetyllactosamine galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-galactosylacetylglucosaminylgalactosyl-glucosylceramide galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-galactosylacetylglucosaminylgalactosylglucosylceramide galactosyltransferase activity","type":"related"}],"termid":"GO:0047276"}


id: PBO:0088079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin (Ub) chain assembly factor (E4); forms branched Ub chains on substrates destined for degradation, catalyzing K48-linked multi-monoubiquitination of K29-linked Ub chains assembled by the Ub-ligase Ufd4p; involved in the Ub-fusion degradation pathway, OLE membrane fluidity pathway, stress response survival and the ERAD pathway for misfolded proteins, where it promotes ubiquitination and transfer of ERAD substrates to Rad23p; U-box family member; homologous to human Ufd2a and Ufd2b","termid":"PBO:0088079"}


id: PBO:0082500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex; removes 5' cap structure from mRNAs prior to their degradation; also enters nucleus and positively regulates transcription initiation; nudix hydrolase family member; forms cytoplasmic foci upon DNA replication stress; human homolog DCP2 complements yeast dcp2 thermosensitive mutant","termid":"PBO:0082500"}


id: PBO:0063855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein interacting with PRKCA 1","termid":"PBO:0063855"}


id: GO:0008017
data:
  {"annotated_genes":["SJAG_01546","SJAG_02795","SJAG_00851","SJAG_02336","SJAG_02045","SJAG_03073","SJAG_01613","SJAG_04745","SJAG_00773","SJAG_00930","SJAG_00332","SJAG_00723","SJAG_03540","SJAG_00042","SJAG_02624","SJAG_02040","SJAG_01760","SJAG_04841","SJAG_01297","SJAG_02814"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57554,58908,59228,61211,62185,63760,63916,66419,68297,69012,73191,73421,74996,75415,75822,75972,77509],"is_not":false,"summary":null,"term":"GO:0008017"},{"annotations":[65563,78381,68375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to a microtubule, a filament composed of tubulin monomers.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulin binding","termid":"GO:0015631"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"microtubule binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9614343"],"synonyms":[{"name":"microtubule severing activity","type":"related"},{"name":"microtubule/chromatin interaction","type":"related"}],"termid":"GO:0008017","terms_by_termid":{"GO:0008017":null,"GO:0051010":null}}


id: PBO:0028159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5.8S_rRNA_level","termid":"PBO:0028159"}


id: PR:G2TRM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.19","synonyms":[{"name":"Spom972h-SPAC11D3.19","type":"exact"}],"termid":"PR:G2TRM3"}


id: PBO:0070942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 50","termid":"PBO:0070942"}


id: FYPO:0005157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype characterized by normal ascus morphology, i.e. the size, shape, and structure of the ascus are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal ascus morphology","termid":"FYPO:0005157"}


id: PBO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX2 antisense RNA 1","termid":"PBO:0046334"}


id: GO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Growth of a pathogenic organism that results in penetration into cells or tissues of the host organism. This often (but not necessarily) includes a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue.","definition_xrefs":["GOC:mcc","PMID:9728395"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth (obsolete GO:0001404)","synonyms":[{"name":"invasive growth","type":"exact"},{"name":"tissue invasion","type":"exact"}],"termid":"GO:0001404"}


id: GO:0042825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum.","definition_xrefs":["GOC:jl","PMID:10618487","PMID:10631934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"MHC class I peptide loading complex","termid":"GO:0042824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0032991","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"TAP complex","synonyms":[{"name":"transporter associated with antigen presentation","type":"exact"}],"termid":"GO:0042825"}


id: PBO:0027791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_phosphate_starvation","termid":"PBO:0027791"}


id: GO:0110123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotube cell migration.","definition_xrefs":["GOC:ha","PMID:29122742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotube cell migration","termid":"GO:0110123"}


id: PR:O74382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoserine phosphatase SerB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03036","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.07c","secondary_identifiers":["UniProtKB:O74382"],"synonyms":[{"name":"O-phosphoserine phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PSP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PSPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-serB","type":"exact"}],"termid":"PR:O74382"}


id: GO:0050511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + UDP-N-acetyl-D-glucosamine = GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + UDP.","definition_xrefs":["MetaCyc:2.4.1.227-RXN","EC:2.4.1.227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8976","RHEA:23192"],"synonyms":[{"name":"MurG transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:N-acetyl-alpha-D-muramyl(oyl-L-Ala- gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol beta-1,4-N-acetylglucosaminlytransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase activity","type":"related"},{"name":"undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase activity","type":"related"},{"name":"undecaprenyldiphospho-muramoylpentapeptide b-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0050511"}


id: SO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partial DNA sequence assembly of a chromosome or full genome, which contains gaps that are filled with N's.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_genomic_sequence_assembly","synonyms":[{"name":"partial genomic sequence assembly","type":"exact"},{"name":"pseudomolecule","type":"broad"},{"name":"sequence assembly with N-gaps","type":"exact"}],"termid":"SO:0001876"}


id: PBO:0040234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6","termid":"PBO:0040234"}


id: PBO:0064157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIA","termid":"PBO:0064157"}


id: PBO:0036123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3_acetylation_during_vegetative_growth","termid":"PBO:0036123"}


id: RO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"process(P1) regulates process(P2) iff: P1 results in the initiation or termination of P2 OR affects the frequency of its initiation or termination OR affects the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates","termid":"RO:0002211"}


id: PBO:0013079
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisD","termid":"PBO:0013079"}


id: PR:Q10438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pby1 gene.","definition_xrefs":["UniProtKB:Q10438","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin--tyrosine ligase C12B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.04","synonyms":[{"name":"Spom972h-pby1","type":"exact"}],"termid":"PR:Q10438"}


id: GO:0005776
data:
  {"annotated_genes":["SJAG_00059","SJAG_01135","SJAG_04232","SJAG_02699","SJAG_02414","SJAG_06309","SJAG_04655","SJAG_01382","SJAG_03100","SJAG_01274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72129,72155,72486,75835,78004,90016,94985,100049],"is_not":false,"summary":null,"term":"GO:0005776"},{"annotations":[70352,71729],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000421"}]},"cv_name":"cellular_component","definition":"A double-membrane-bounded compartment that engulfs endogenous cellular material as well as invading microorganisms to target them to the lytic vacuole/lysosome for degradation as part of macroautophagy.","definition_xrefs":["ISBN:0198547684","GOC:autophagy","PMID:11099404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01382":null,"SJAG_02414":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_04232":null,"SJAG_04655":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"autophagosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao8663416959"],"synonyms":[{"name":"autophagic vacuole","type":"exact"},{"name":"initial autophagic vacuole","type":"related"}],"termid":"GO:0005776","terms_by_termid":{"GO:0000421":null,"GO:0005776":null}}


id: PBO:0047945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(16)(q22.1)","termid":"PBO:0047945"}


id: PBO:0044024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 alpha 3","termid":"PBO:0044024"}


id: PBO:0041106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSN divergent transcript","termid":"PBO:0041106"}


id: GO:0052241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052241)","synonyms":[{"name":"positive chemotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052241"}


id: FYPO:0004993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which spore germination occurs at a normal (i.e. indistinguishable from wild type) frequency.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal spore germination frequency","synonyms":[{"name":"normal spore viability","type":"related"}],"termid":"FYPO:0004993"}


id: PBO:0045398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 3","termid":"PBO:0045398"}


id: GO:1905666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:22732145","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to endosome","synonyms":[{"name":"regulation of protein localisation in endosome","type":"exact"},{"name":"regulation of protein localization in endosome","type":"exact"}],"termid":"GO:1905666"}


id: PBO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase, VTC complex subunit Vtc2/3 (predicted)","termid":"PBO:0018260"}


id: PBO:0013466
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimer x8","termid":"PBO:0013466"}


id: PBO:0058432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4802","termid":"PBO:0058432"}


id: PBO:0073310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 6","termid":"PBO:0073310"}


id: GO:0050093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanol + NAD+ = formaldehyde + H+ + NADH.","definition_xrefs":["RHEA:19401","EC:1.1.1.244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methanol dehydrogenase activity","secondary_identifiers":["MetaCyc:METHANOL-DEHYDROGENASE-RXN","KEGG_REACTION:R00605"],"synonyms":[{"name":"methanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050093"}


id: PBO:0049066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 83","termid":"PBO:0049066"}


id: GO:0044043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues, involving more than one organism.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism glucan metabolic process (obsolete GO:0044043)","synonyms":[{"name":"multi-organism glucan metabolism","type":"exact"}],"termid":"GO:0044043"}


id: FYPO:0007479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the assembly and stable inheritance of heterochromatic structure is normal (i.e. indistinguishable from wild type) in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PMID:31278118","PomBase:mah","PMID:29899117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"normal epigenetic heterochromatin inheritance","synonyms":[{"name":"normal PEV","type":"related"},{"name":"normal epigenetic heterochromatin propagation","type":"exact"},{"name":"normal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007479"}


id: PBO:0015272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shuttle craft like transcriptional regulator/ ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0015272"}


id: PBO:0067752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 51","termid":"PBO:0067752"}


id: PBO:0051350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-40","termid":"PBO:0051350"}


id: GO:1900698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"regulation of o-orsellinic acid formation","type":"exact"},{"name":"regulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900698"}


id: GO:0097566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of four basal bodies found in Giardia species (trophozoite stage). It comprises the left lateral basal body pair and the left middle basal body pair (i.e. the anterior, ventral, caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally).","definition_xrefs":["PMID:16607022","PMID:5961344","GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left tetrad","termid":"GO:0097566"}


id: GO:0075287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of sporangiospore formation","termid":"GO:0075286"},{"relation_name":"positively_regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangiospore formation","termid":"GO:0075287"}


id: PBO:0054116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1482","termid":"PBO:0054116"}


id: GO:2001118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a tetrahydromethanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanopterin-containing compound biosynthetic process","termid":"GO:2001116"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin metabolic process","termid":"GO:2001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042559","GO:0008150"],"is_obsolete":false,"name":"tetrahydromethanopterin biosynthetic process","synonyms":[{"name":"tetrahydromethanopterin biosynthesis","type":"exact"}],"termid":"GO:2001118"}


id: MOD:01626
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms L-cystine by forming a disulfide bond that either cross-links two peptidyl L-cysteine residues, or modifies a peptidyl cysteine with a free cysteine.","definition_xrefs":["PubMed:8344916","PubMed:366603","PubMed:1988019","PubMed:2001356","PubMed:2076469","RESID:AA0025","PubMed:3083866","PubMed:7918467","ChEBI:16283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cystine","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cys2","type":"exact"},{"name":"Cystine ((Cys)2)","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:01626"}


id: FYPO:0007818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein ubiquitination during nitrogen starvation","synonyms":[{"name":"decreased protein ubiquitination during nitrogen depletion","type":"exact"},{"name":"decreased protein ubiquitination during nitrogen deprivation","type":"exact"},{"name":"decreased protein ubiquitinylation during nitrogen starvation","type":"exact"},{"name":"decreased protein ubiquitylation during nitrogen starvation","type":"exact"},{"name":"reduced protein ubiquitination during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007818"}


id: GO:0047898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + ferricytochrome b1 = CO2 + ferrocytochrome b1.","definition_xrefs":["MetaCyc:FORMATE-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.2.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"formate dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:21520"],"synonyms":[{"name":"formate:cytochrome b1 oxidoreductase activity","type":"related"},{"name":"formate:ferricytochrome-b1 oxidoreductase activity","type":"related"}],"termid":"GO:0047898"}


id: PBO:0067548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 697, pseudogene","termid":"PBO:0067548"}


id: GO:1990523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of bone following its loss or destruction.","definition_xrefs":["PMID:25257467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone regeneration","termid":"GO:1990523"}


id: FYPO:0003849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing fluconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on fluconazole","synonyms":[{"name":"normal cell population growth in presence of fluconazole","type":"exact"},{"name":"normal cell population growth on fluconazole","type":"exact"},{"name":"normal cellular response to fluconazole","type":"related"},{"name":"normal vegetative cell population growth on fluconazole","type":"exact"}],"termid":"FYPO:0003849"}


id: PBO:0057865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3176","termid":"PBO:0057865"}


id: GO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephron are generated and organized. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron morphogenesis","termid":"GO:0072028"}


id: GO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1,4-benzoquinone + H2O + phenylacetyl-CoA = 2 hydroquinone + phenylglyoxylyl-CoA.","definition_xrefs":["RHEA:15705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenylacetyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.17.5.1","KEGG_REACTION:R07222","MetaCyc:1.17.5.1-RXN"],"synonyms":[{"name":"phenylacetyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"phenylacetyl-CoA:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0033789"}


id: GO:0034718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the survival motor neuron (SMN) protein and Gemin2; may form the stable core of the larger SMN complex.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"SMN-Gemin2 complex","termid":"GO:0034718"}


id: GO:2000037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal complex patterning.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"stomatal complex patterning","termid":"GO:0010375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal complex patterning","termid":"GO:2000037"}


id: PBO:0050055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, V (pseudogene)","termid":"PBO:0050055"}


id: GO:0031815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y5 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"P2Y5 nucleotide receptor binding","synonyms":[{"name":"P2Y5 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031815"}


id: PBO:0066317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPMS2 pseudogene 1","termid":"PBO:0066317"}


id: GO:0047234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = sucrose + 1F-alpha-D-galactosylraffinose.","definition_xrefs":["MetaCyc:2.4.1.166-RXN","EC:2.4.1.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"raffinose-raffinose alpha-galactotransferase activity","secondary_identifiers":["RHEA:14125","MetaCyc:RXN-11490"],"synonyms":[{"name":"raffinose (raffinose donor) galactosyltransferase activity","type":"related"},{"name":"raffinose-raffinose a-galactosyltransferase activity","type":"exact"},{"name":"raffinose-raffinose alpha-galactosyltransferase activity","type":"exact"},{"name":"raffinose:raffinose alpha-D-galactosyltransferase activity","type":"related"},{"name":"raffinose:raffinose alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047234"}


id: GO:0021502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the lateral borders of the neural plate begin to migrate upwards to form the neural folds, caused by the proliferation of the underlying mesoderm.","definition_xrefs":["PMID:15806586","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural fold formation","termid":"GO:0001842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold elevation formation","termid":"GO:0021502"}


id: PBO:0004258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, unknown biological role","termid":"PBO:0004258"}


id: PBO:0045103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 1 associated protein 1","termid":"PBO:0045103"}


id: PBO:0066735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 32","termid":"PBO:0066735"}


id: GO:0018818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde = acetylene + H2O.","definition_xrefs":["EC:4.2.1.112","RHEA:17885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"acetylene hydratase activity","secondary_identifiers":["KEGG_REACTION:R05380","UM-BBD_reactionID:r0591","MetaCyc:R141-RXN"],"synonyms":[{"name":"AH","type":"related"},{"name":"AHy","type":"related"},{"name":"acetaldehyde hydro-lyase activity","type":"related"}],"termid":"GO:0018818"}


id: GO:0102731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol 1,3,4,6-tetrakisphosphate(8-) + ATP = H+ + 1L-myo-inositol 1,2,3,4,6-pentakisphosphate(10-) + ADP.","definition_xrefs":["EC:2.7.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-myo-inositol (1,3,4,6)-tetrakisphosphate 2-kinase activity","secondary_identifiers":["MetaCyc:RXN-7185"],"termid":"GO:0102731"}


id: PBO:0028139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_small_ribosomal_subunit_level","termid":"PBO:0028139"}


id: PBO:0054795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2209","termid":"PBO:0054795"}


id: GO:0110094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using polyphosphate as the signal.","definition_xrefs":["GOC:rjd","PMID:27519410","PMID:28584190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"polyphosphate-mediated signaling","synonyms":[{"name":"polyphosphate signaling","type":"exact"}],"termid":"GO:0110094"}


id: PBO:0005575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf15","termid":"PBO:0005575"}


id: GO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.","definition_xrefs":["RHEA:59419"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptamine:oxygen oxidoreductase (deaminating) activity (obsolete GO:0052593)","termid":"GO:0052593"}


id: PBO:0053232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligatin","termid":"PBO:0053232"}


id: GO:0046298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorobenzoate metabolic process","termid":"GO:0018898"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,4-dichlorobenzoate catabolic process","synonyms":[{"name":"2,4-dichlorobenzoate breakdown","type":"exact"},{"name":"2,4-dichlorobenzoate catabolism","type":"exact"},{"name":"2,4-dichlorobenzoate degradation","type":"exact"}],"termid":"GO:0046298"}


id: PBO:0053763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1005","termid":"PBO:0053763"}


id: PBO:0069745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1026, pseudogene","termid":"PBO:0069745"}


id: GO:1903954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:mtg_cardiac_conduct_nov11","PMID:25281747","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"},{"relation_name":"is_a","term_name":"regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","termid":"GO:1903952"},{"relation_name":"is_a","term_name":"positive regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","synonyms":[{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"narrow"},{"name":"positive regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:1903954"}


id: PBO:0040184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic peptidase retroviral like 1","termid":"PBO:0040184"}


id: PBO:0087647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences sufficient for both complex assembly and DNA binding; respiratory defect of the null mutant is functionally complemented by human NFYA","termid":"PBO:0087647"}


id: PBO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derived from human ortholog MZT1","termid":"PBO:0001269"}


id: GO:1900304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"negatively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of laminaritriose transport","synonyms":[{"name":"down regulation of laminaritriose transport","type":"exact"},{"name":"down-regulation of laminaritriose transport","type":"exact"},{"name":"downregulation of laminaritriose transport","type":"exact"},{"name":"inhibition of laminaritriose transport","type":"narrow"}],"termid":"GO:1900304"}


id: FYPO:0007461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to histidine. Cells stop growing (and may die) at a concentration of histidine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to histidine","synonyms":[{"name":"hypersensitive to histidine","type":"exact"},{"name":"sensitive to histidine during mitotic cell cycle","type":"related"},{"name":"sensitive to histidine during vegetative growth","type":"exact"}],"termid":"FYPO:0007461"}


id: GO:1904917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane from lysosomal lumen to cytosol.","definition_xrefs":["GO_REF:0000078","PMID:22822152","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"L-arginine transmembrane export from vacuole","termid":"GO:1990818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-arginine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-arginine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904917"}


id: PATO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000745 behavioral quality value (obsolete PATO:0000745)","termid":"PATO:0000745"}


id: GO:1905303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macropinocytosis.","definition_xrefs":["GOC:TermGenie","GOC:pad","PMID:18691641","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pinocytosis","termid":"GO:0048549"},{"relation_name":"is_a","term_name":"regulation of macropinocytosis","termid":"GO:1905301"},{"relation_name":"positively_regulates","term_name":"macropinocytosis","termid":"GO:0044351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of macropinocytosis","synonyms":[{"name":"activation of macropinocytosis","type":"narrow"},{"name":"up regulation of macropinocytosis","type":"exact"},{"name":"up-regulation of macropinocytosis","type":"exact"},{"name":"upregulation of macropinocytosis","type":"exact"}],"termid":"GO:1905303"}


id: PBO:0059844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like","termid":"PBO:0059844"}


id: PBO:0044881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND6A divergent transcript","termid":"PBO:0044881"}


id: PR:P36605
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histidinol-phosphate aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02885","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphate aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.02c","secondary_identifiers":["UniProtKB:P36605"],"synonyms":[{"name":"Spom972h-hisC","type":"exact"},{"name":"imidazole acetol-phosphate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36605"}


id: GO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains, which act as a signal to promote error-free DNA postreplication repair; in Saccharomyces the complex comprises Ubc13p and Mms2p.","definition_xrefs":["PMID:15772086","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"UBC13-MMS2 complex","termid":"GO:0031372"}


id: GO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete minor histocompatibility antigen (obsolete GO:0005558)","synonyms":[{"name":"minor histocompatibility antigen","type":"exact"}],"termid":"GO:0005558"}


id: GO:0061511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The centrosome organization process by which a centriole increases in length as part of the process of replication.","definition_xrefs":["PMID:21576394","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centriole replication","termid":"GO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"centriole elongation","termid":"GO:0061511"}


id: PBO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit a (predicted)","termid":"PBO:0002088"}


id: PBO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 2","termid":"PBO:0044591"}


id: FYPO:0007334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at centromere outer repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abolished chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished chromatin silencing at centromere otr","type":"exact"},{"name":"abolished chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"abolished chromatin silencing at pericentric region","type":"related"},{"name":"abolished chromatin silencing at pericentromeric region","type":"related"},{"name":"abolished heterochromatin silencing at centromere outer repeat region","type":"exact"},{"name":"chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0007334"}


id: PR:O14112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.17c","synonyms":[{"name":"Spom972h-rps1001","type":"exact"}],"termid":"PR:O14112"}


id: PBO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 1","termid":"PBO:0061832"}


id: SO:0000524
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene and one VJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_cluster","synonyms":[{"name":"V VJ cluster","type":"exact"},{"name":"V-(VJ)-CLUSTER","type":"exact"}],"termid":"SO:0000524"}


id: GO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002601"}


id: PBO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas cell surface death receptor","termid":"PBO:0047307"}


id: PBO:0080241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 4","termid":"PBO:0080241"}


id: GO:0016638
data:
  {"annotated_genes":["SJAG_03266","SJAG_02496","SJAG_03861","SJAG_03290","SJAG_04054","SJAG_01881","SJAG_03641","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[72266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"},{"annotations":[71889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"},{"annotations":[108120,83006,73476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004375"},{"annotations":[106936,74829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null,"SJAG_03266":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.4.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016638","terms_by_termid":{"GO:0003884":null,"GO:0004354":null,"GO:0004375":null,"GO:0004733":null,"GO:0016040":null}}


id: PBO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog","termid":"PBO:0001511"}


id: PR:O94745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial-processing peptidase subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11851:SF49","PRO:DNx","OMA:SCHPO03131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial-processing peptidase subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.12c","secondary_identifiers":["UniProtKB:O94745"],"synonyms":[{"name":"Spom972h-PMPCA","type":"exact"},{"name":"alpha-MPP (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94745"}


id: GO:0097698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that occurs by base-excision repair of telomeric DNA in response to DNA damage. Telomeric sequences are particularly susceptible to oxidative DNA damage, due to their G-rich nature.","definition_xrefs":["PMID:24703901","GOC:BHF","GOC:BHF_telomere","GOC:jbu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair","termid":"GO:0006284"},{"relation_name":"is_a","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"telomere maintenance via base-excision repair","termid":"GO:0097698"}


id: GO:0004412
data:
  {"annotated_genes":["SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70937],"is_not":false,"summary":null,"term":"GO:0004412"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + NADP+ = L-aspartate-4-semialdehyde + NADPH + H+.","definition_xrefs":["EC:1.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"homoserine dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:15761","MetaCyc:HOMOSERDEHYDROG-RXN"],"termid":"GO:0004412","terms_by_termid":{"GO:0004412":null}}


id: GO:0008697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydro-4-deoxy-D-glucuronate = 3-deoxy-D-glycero-2,5-hexodiulosonate.","definition_xrefs":["RHEA:23896","EC:5.3.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity","secondary_identifiers":["KEGG_REACTION:R04383","MetaCyc:5.3.1.17-RXN"],"synonyms":[{"name":"4-deoxy-L-threo-5-hexosulose-uronate aldose-ketose-isomerase activity","type":"related"},{"name":"4-deoxy-L-threo-5-hexulose uronate isomerase activity","type":"related"},{"name":"5-keto-4-deoxyuronate isomerase activity","type":"related"}],"termid":"GO:0008697"}


id: GO:1903536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GO_REF:0000058","PMID:12018418","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of lactose biosynthetic process","termid":"GO:1903534"},{"relation_name":"positively_regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactose biosynthetic process","synonyms":[{"name":"activation of lactose anabolism","type":"narrow"},{"name":"activation of lactose biosynthesis","type":"narrow"},{"name":"activation of lactose biosynthetic process","type":"narrow"},{"name":"activation of lactose formation","type":"narrow"},{"name":"activation of lactose synthesis","type":"narrow"},{"name":"positive regulation of lactose anabolism","type":"exact"},{"name":"positive regulation of lactose biosynthesis","type":"exact"},{"name":"positive regulation of lactose formation","type":"exact"},{"name":"positive regulation of lactose synthesis","type":"exact"},{"name":"up regulation of lactose anabolism","type":"exact"},{"name":"up regulation of lactose biosynthesis","type":"exact"},{"name":"up regulation of lactose biosynthetic process","type":"exact"},{"name":"up regulation of lactose formation","type":"exact"},{"name":"up regulation of lactose synthesis","type":"exact"},{"name":"up-regulation of lactose anabolism","type":"exact"},{"name":"up-regulation of lactose biosynthesis","type":"exact"},{"name":"up-regulation of lactose biosynthetic process","type":"exact"},{"name":"up-regulation of lactose formation","type":"exact"},{"name":"up-regulation of lactose synthesis","type":"exact"},{"name":"upregulation of lactose anabolism","type":"exact"},{"name":"upregulation of lactose biosynthesis","type":"exact"},{"name":"upregulation of lactose biosynthetic process","type":"exact"},{"name":"upregulation of lactose formation","type":"exact"},{"name":"upregulation of lactose synthesis","type":"exact"}],"termid":"GO:1903536"}


id: SO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA adenine base,at the 8 carbon, often the product of DNA damage.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenine","termid":"SO:0001962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8_oxoadenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"8-oxoA","type":"exact"},{"name":"8-oxoadenine","type":"exact"}],"termid":"SO:0001967"}


id: GO:2000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in cardiac right atrium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in cardiac right atrium morphogenesis (obsolete GO:2000161)","termid":"GO:2000161"}


id: GO:0010488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-glycan = galactose-beta-1,3-N-glycan + UDP.","definition_xrefs":["PMID:17630273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity","termid":"GO:0010488"}


id: GO:0010457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the two centrioles within a centrosome remain tightly paired.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"centriole-centriole cohesion","termid":"GO:0010457"}


id: PBO:0030655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_amiloride","termid":"PBO:0030655"}


id: PBO:0078986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon CTA) 2-1","termid":"PBO:0078986"}


id: PBO:0081818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 11, Y-linked","termid":"PBO:0081818"}


id: PBO:0004015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G10 protein","termid":"PBO:0004015"}


id: FYPO:0004692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle","termid":"FYPO:0002966"},{"relation_name":"is_a","term_name":"normal protein localization to spindle","termid":"FYPO:0007865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"normal protein localization to mitotic spindle midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0004692"}


id: PBO:0053283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM2 and SIGLEC10 antisense RNA 1","termid":"PBO:0053283"}


id: FYPO:0007281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during meiosis measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal level of meiotic gene mRNA during vegetative growth","synonyms":[{"name":"normal level of meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"normal level of meiotic gene RNA during vegetative growth","type":"exact"},{"name":"normal level of meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"normal level of meiotic nuclear division gene mRNA during vegetative growth","type":"exact"},{"name":"normal meiotic gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0007281"}


id: PBO:0074511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A3","termid":"PBO:0074511"}


id: PBO:0044715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 2 (pseudogene)","termid":"PBO:0044715"}


id: FYPO:0001702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nocodazole. Cells stop growing (and may die) at a concentration of nocodazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to nocodazole","synonyms":[{"name":"hypersensitive to nocodazole","type":"exact"},{"name":"sensitive to nocodazole during mitotic cell cycle","type":"related"},{"name":"sensitive to nocodazole during vegetative growth","type":"exact"}],"termid":"FYPO:0001702"}


id: PBO:0084576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discreet protein; YKR004C-A was originally annotated as an independent ORF, but was later demonstrated to be an exon of an adjacent ORF, YKR004C","termid":"PBO:0084576"}


id: PBO:0089744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase Ipp1","termid":"PBO:0089744"}


id: GO:0140926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-kynurenine from one side of a membrane to the other.","definition_xrefs":["PMID:35245456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-kynurenine transmembrane transporter activity","termid":"GO:0140926"}


id: GO:0047748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-beta-cholestane-3-alpha,7-alpha,12-alpha,26-tetraol + NAD+ = 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestan-26-al + NADH.","definition_xrefs":["RHEA:34631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholestanetetraol 26-dehydrogenase activity","secondary_identifiers":["MetaCyc:CHOLESTANETETRAOL-26-DEHYDROGENASE-RXN"],"synonyms":[{"name":"5beta-cholestane-3alpha,7alpha,12alpha,26-tetraol:NAD+ 26-oxidoreductase activity","type":"exact"},{"name":"5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol dehydrogenase activity","type":"exact"},{"name":"TEHC-NAD oxidoreductase activity","type":"exact"},{"name":"cholestanetetrol 26-dehydrogenase activity","type":"exact"}],"termid":"GO:0047748"}


id: PBO:0061225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NODAL modulator 1","termid":"PBO:0061225"}


id: GO:0051436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin ligase activity that contributes to the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle (obsolete GO:0051436)","synonyms":[{"name":"APC inhibition during mitotic cell cycle","type":"narrow"},{"name":"anaphase promoting complex inhibition during mitotic cell cycle","type":"narrow"},{"name":"anaphase-promoting complex inhibition during mitotic cell cycle","type":"narrow"},{"name":"down regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"down-regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"downregulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"inhibition of ubiquitin ligase activity during mitotic cell cycle","type":"narrow"},{"name":"mitotic APC inhibition","type":"narrow"},{"name":"mitotic APC inhibitor","type":"narrow"},{"name":"mitotic SCF complex inhibitor","type":"narrow"},{"name":"mitotic anaphase promoting complex inhibition","type":"narrow"},{"name":"mitotic anaphase promoting complex inhibitor","type":"narrow"},{"name":"mitotic anaphase-promoting complex inhibition","type":"narrow"},{"name":"mitotic anaphase-promoting complex inhibitor","type":"narrow"},{"name":"mitotic ubiquitin ligase inhibitor","type":"narrow"},{"name":"negative regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle","type":"related"}],"termid":"GO:0051436"}


id: GO:0033888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine 6-sulfate + H2O = 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine + H+ + sulfate.","definition_xrefs":["EC:3.1.6.10","RHEA:10536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"chondro-6-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R03518","MetaCyc:CHONDRO-6-SULFATASE-RXN"],"synonyms":[{"name":"4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine-6-sulfate 6-sulfohydrolase activity","type":"related"}],"termid":"GO:0033888"}


id: PBO:0070252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 195 pseudogene","termid":"PBO:0070252"}


id: FYPO:0002068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize histidine, and therefore requires histidine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for histidine","synonyms":[{"name":"histidine auxotrophy","type":"exact"},{"name":"growth auxotrophic for histidine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for histidine during vegetative growth","type":"exact"}],"termid":"FYPO:0002068"}


id: GO:0015641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein toxin (obsolete GO:0015641)","synonyms":[{"name":"lipoprotein toxin","type":"exact"}],"termid":"GO:0015641"}


id: PBO:0081522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 431","termid":"PBO:0081522"}


id: PATO:0002265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's disposition to exhibit marked activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioural activity","termid":"PATO:0002265"}


id: GO:0032157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A contractile ring, i.e. a cytoskeletal structure composed of actin filaments and myosin, that forms beneath the plasma membrane of the prospore envelope in meiotic cells in preparation for completing cytokinesis.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic actomyosin contractile ring","termid":"GO:0110086"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0070938","GO:0005737","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"prospore contractile ring","synonyms":[{"name":"actomyosin ring","type":"related"},{"name":"cytokinetic ring","type":"related"},{"name":"meiotic contractile ring","type":"related"}],"termid":"GO:0032157"}


id: PBO:0059543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Lys (AAA/G)","termid":"PBO:0059543"}


id: PBO:0027766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_calcium_level","termid":"PBO:0027766"}


id: PBO:0039244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1A3 antisense RNA 1","termid":"PBO:0039244"}


id: PBO:0067340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 434, pseudogene","termid":"PBO:0067340"}


id: SO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_glycinylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_glycinylcarbamoyladenosine","secondary_identifiers":["RNAMOD:010"],"synonyms":[{"name":"N6 glycinylcarbamoyladenosine","type":"exact"},{"name":"N6-glycinylcarbamoyladenosine","type":"exact"},{"name":"g6A","type":"exact"}],"termid":"SO:0001304"}


id: PR:P36581
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calnexin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11073:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.11c","secondary_identifiers":["UniProtKB:P36581"],"synonyms":[{"name":"SPAC3C7.11c","type":"related"},{"name":"Spom972h-CANX","type":"exact"},{"name":"cnx1","type":"related"}],"termid":"PR:P36581"}


id: GO:0033417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"CUU codon-amino acid adaptor activity","synonyms":[{"name":"CTT codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033417"}


id: PBO:0016042
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PTBP3","termid":"PBO:0016042"}


id: PBO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-Tim10/DDP type","termid":"PBO:0000679"}


id: GO:0102111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A20 + 2-oxoglutarate + O2 = gibberellin A29 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin A20,2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-113"],"termid":"GO:0102111"}


id: PBO:0050712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPB1 associated protein 1","termid":"PBO:0050712"}


id: GO:0061067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"negatively_regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dauer larval development","termid":"GO:0061067"}


id: GO:0140361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic-GMP-AMP from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:31126740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transport","termid":"GO:1903790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"cyclic-GMP-AMP transmembrane import across plasma membrane","termid":"GO:0140361"}


id: GO:0045801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chitin-based cuticular tanning.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chitin-based cuticle tanning","termid":"GO:0007564"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chitin-based cuticle tanning","synonyms":[{"name":"activation of cuticle tanning","type":"narrow"},{"name":"positive regulation of cuticle hardening","type":"narrow"},{"name":"positive regulation of cuticle tanning","type":"exact"},{"name":"stimulation of cuticle tanning","type":"narrow"},{"name":"up regulation of cuticle tanning","type":"exact"},{"name":"up-regulation of cuticle tanning","type":"exact"},{"name":"upregulation of cuticle tanning","type":"exact"}],"termid":"GO:0045801"}


id: PBO:0045988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 2","termid":"PBO:0045988"}


id: GO:0030779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-hydroxydihydrosanguinarine + S-adenosyl-L-methionine(1+) = S-adenosyl-L-homocysteine + dihydrochelirubine + H+.","definition_xrefs":["RHEA:18541","EC:2.1.1.119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"10-hydroxydihydrosanguinarine 10-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.119-RXN","KEGG_REACTION:R04707"],"synonyms":[{"name":"S-adenosyl-L-methionine:10-hydroxydihydrosanguinarine 10-O-methyltransferase activity","type":"related"}],"termid":"GO:0030779"}


id: GO:0015825
data:
  {"annotated_genes":["SJAG_03256","SJAG_04588"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65295],"is_not":false,"summary":null,"term":"GO:0015825"},{"annotations":[99093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine, the L-enantiomer of 2-amino-3-hydroxypropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-serine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0090479"],"synonyms":[{"name":"L-serine import","type":"narrow"}],"termid":"GO:0015825","terms_by_termid":{"GO:0015825":null,"GO:0090516":null}}


id: GO:1902788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isooctane stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:22328008","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isooctane","termid":"GO:1902788"}


id: PBO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 1, transcriptional regulator","termid":"PBO:0061697"}


id: PR:O94261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.12c","synonyms":[{"name":"Spom972h-fta3","type":"exact"},{"name":"sim4 complex subunit fta3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94261"}


id: PBO:0058814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7856","termid":"PBO:0058814"}


id: PBO:0057230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 409","termid":"PBO:0057230"}


id: GO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of border follicle cell delamination","synonyms":[{"name":"activation of border follicle cell delamination","type":"narrow"},{"name":"positive regulation of border cell delamination","type":"broad"},{"name":"stimulation of border follicle cell delamination","type":"narrow"},{"name":"up regulation of border follicle cell delamination","type":"exact"},{"name":"up-regulation of border follicle cell delamination","type":"exact"},{"name":"upregulation of border follicle cell delamination","type":"exact"}],"termid":"GO:0030711"}


id: GO:0008902
data:
  {"annotated_genes":["SJAG_02420","SJAG_04282","SJAG_02421"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70138,73265,73328],"is_not":false,"summary":null,"term":"GO:0008902"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-amino-5-hydroxymethyl-2-methylpyrimidine + ATP = 4-amino-2-methyl-5-phosphomethylpyrimidine + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.49","RHEA:23096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02420":null,"SJAG_02421":null,"SJAG_04282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylpyrimidine kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:OHMETPYRKIN-RXN","KEGG_REACTION:R03471"],"synonyms":[{"name":"ATP:4-amino-5-hydroxymethyl-2-methylpyrimidine 5-phosphotransferase activity","type":"related"},{"name":"hydroxymethylpyrimidine kinase (phosphorylating)","type":"related"}],"termid":"GO:0008902","terms_by_termid":{"GO:0008902":null}}


id: GO:0051496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament bundle assembly","termid":"GO:0032233"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"positively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"positive regulation of stress fiber assembly","synonyms":[{"name":"activation of stress fiber formation","type":"narrow"},{"name":"positive regulation of stress fibre biosynthesis","type":"related"},{"name":"positive regulation of stress fibre formation","type":"related"},{"name":"stimulation of stress fiber formation","type":"narrow"},{"name":"up regulation of stress fiber formation","type":"related"},{"name":"up-regulation of stress fiber formation","type":"exact"},{"name":"upregulation of stress fiber formation","type":"related"}],"termid":"GO:0051496"}


id: PBO:0041870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsequestrin 2","termid":"PBO:0041870"}


id: PBO:0060110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 11","termid":"PBO:0060110"}


id: GO:0034014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triglyceride stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triglyceride","synonyms":[{"name":"response to triacylglyceride","type":"exact"},{"name":"response to triacylglycerol","type":"exact"}],"termid":"GO:0034014"}


id: GO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of activation-induced cell death of T cells.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"activation-induced cell death of T cells","termid":"GO:0006924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activation-induced cell death of T cells","synonyms":[{"name":"regulation of AICD","type":"broad"},{"name":"regulation of activated T cell apoptosis","type":"broad"},{"name":"regulation of activation-induced cell death of T lymphocytes","type":"exact"},{"name":"regulation of activation-induced cell death of T-cells","type":"exact"},{"name":"regulation of activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"regulation of antigen-driven apoptosis","type":"broad"}],"termid":"GO:0070235"}


id: GO:0120092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Acetyl-CoA + [protein]-L-lysine = CoA + [protein]-N(6)-acetyl-L-lysine.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"crotonyl-CoA hydratase activity","secondary_identifiers":["RHEA:45584"],"termid":"GO:0120092"}


id: RO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between an arterial structure and another structure, where the arterial structure acts as a conduit channeling fluid, substance or energy.","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supplies","termid":"RO:0002178"}


id: GO:0036321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of ghrelin from a cell. Ghrelin is a 28 amino acid hunger-stimulating peptide hormone.","definition_xrefs":["PMID:14610293","Wikipedia:Ghrelin","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ghrelin secretion","synonyms":[{"name":"pancreatic ghrelin secretion","type":"narrow"}],"termid":"GO:0036321"}


id: GO:0099067
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic endosome membrane (obsolete GO:0099067)","termid":"GO:0099067"}


id: PBO:0049380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C2 antisense RNA 2","termid":"PBO:0049380"}


id: PBO:0068558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 9, pseudogene","termid":"PBO:0068558"}


id: PBO:0040561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 2","termid":"PBO:0040561"}


id: PBO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase, acidic pseudogene 2","termid":"PBO:0043004"}


id: PBO:0065628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 6","termid":"PBO:0065628"}


id: MOD:01398
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-propanoyl-L-lysine.","definition_xrefs":["PubMed:17684016","PubMed:17267393","PubMed:20715035","RESID:AA0475","Unimod:58#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-propanoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(propanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-propionylaminocaproic acid","type":"exact"},{"name":"MOD_RES N6-propionyllysine","type":"exact"},{"name":"N(zeta)-propanoyllysine","type":"exact"},{"name":"N6-(1-oxopropyl)-L-lysine","type":"exact"},{"name":"N6-propanoyl-L-lysine","type":"exact"},{"name":"N6-propionyllysine","type":"exact"},{"name":"epsilon-propanoyl-L-lysine","type":"exact"},{"name":"epsilon-propionyl-L-lysine","type":"exact"}],"termid":"MOD:01398"}


id: PR:P09627
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pma1 gene.","definition_xrefs":["UniProtKB:P09627","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.10c","synonyms":[{"name":"Spom972h-pma1","type":"exact"},{"name":"proton pump 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P09627"}


id: PBO:0061808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odr-4 GPCR localization factor homolog","termid":"PBO:0061808"}


id: PBO:0087410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (145 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification","termid":"PBO:0087410"}


id: SO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA_gene","synonyms":[{"name":"mitochondrial rRNA gene","type":"exact"}],"termid":"SO:0002363"}


id: GO:0021541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ammon gyrus over time, from its formation to the mature structure. The ammon gyrus, often subdivided into the CA1 and CA3 regions, is one of the two interlocking gyri of the hippocampus that is rich in large pyramidal neurons.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hippocampus development","termid":"GO:0021766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ammon gyrus development","synonyms":[{"name":"Ammon's horn development","type":"related"},{"name":"cornu ammonis development","type":"related"}],"termid":"GO:0021541"}


id: PBO:0041487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C11orf98 pseudogene 2","termid":"PBO:0041487"}


id: PBO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Lsp1","termid":"PBO:0005766"}


id: GO:1901270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipooligosaccharide.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide catabolic process","synonyms":[{"name":"lipooligosaccharide breakdown","type":"exact"},{"name":"lipooligosaccharide catabolism","type":"exact"},{"name":"lipooligosaccharide degradation","type":"exact"}],"termid":"GO:1901270"}


id: GO:1900621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Calcium-mediated signaling that results in regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (obsolete GO:1900621)","synonyms":[{"name":"regulation of gene-specific transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"regulation of global transcription from Pol II promoter by calcium-mediated signaling","type":"related"},{"name":"regulation of transcription from Pol II promoter by calcium-mediated signaling","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global by calcium-mediated signaling","type":"related"}],"termid":"GO:1900621"}


id: PBO:0091710
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of K-252a Sensitivity","termid":"PBO:0091710"}


id: GO:1903889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant epidermal cell differentiation.","definition_xrefs":["PMID:123345","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"negatively_regulates","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant epidermal cell differentiation","synonyms":[{"name":"down regulation of plant epidermal cell differentiation","type":"exact"},{"name":"down-regulation of plant epidermal cell differentiation","type":"exact"},{"name":"downregulation of plant epidermal cell differentiation","type":"exact"},{"name":"inhibition of plant epidermal cell differentiation","type":"narrow"}],"termid":"GO:1903889"}


id: PATO:0000546
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's lacking photosensitivity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoinsensitive","synonyms":[{"name":"photoresistant","type":"related"}],"termid":"PATO:0000546"}


id: GO:0046003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the syncytial blastoderm mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytial blastoderm mitotic cell cycle","termid":"GO:0007348"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"syncytial blastoderm mitotic cell cycle","termid":"GO:0035186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of syncytial blastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through syncytial blastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"negative regulation of syncytial blastoderm cell cycle progression","type":"exact"}],"termid":"GO:0046003"}


id: GO:0000214
data:
  {"annotated_genes":["SJAG_04907","SJAG_01260","SJAG_03328","SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71281,73230,77486,101127],"is_not":false,"summary":null,"term":"GO:0000214"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron.","definition_xrefs":["PMID:22391451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA-intron endonuclease complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SEN complex","type":"exact"},{"name":"tRNA splicing endonuclease complex","type":"exact"}],"termid":"GO:0000214","terms_by_termid":{"GO:0000214":null}}


id: PBO:0080065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 2","termid":"PBO:0080065"}


id: FYPO:0000761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population undergoes conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased conjugation frequency","synonyms":[{"name":"increased conjugation efficiency","type":"related"},{"name":"increased mating frequency","type":"exact"},{"name":"increased occurrence of conjugation","type":"exact"},{"name":"increased zygote formation","type":"related"}],"termid":"FYPO:0000761"}


id: PBO:0050170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 26","termid":"PBO:0050170"}


id: GO:2001286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of caveolin-mediated endocytosis","synonyms":[{"name":"regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001286"}


id: PBO:0029251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_medial_cortical_node","termid":"PBO:0029251"}


id: PBO:0050965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon nu 1, pseudogene","termid":"PBO:0050965"}


id: GO:0061593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction sulfoquinovose = 6-deoxy-6-sulfofructose.","definition_xrefs":["PMID:24463506","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"sulfoquinovose isomerase activity","termid":"GO:0061593"}


id: PR:O59790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aurora kinase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ark1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.13c","secondary_identifiers":["UniProtKB:O59790"],"synonyms":[{"name":"SPCC320.13c","type":"related"},{"name":"Spom972h-AURKB","type":"exact"},{"name":"aurora-related kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sex1","type":"related"}],"termid":"PR:O59790"}


id: GO:0035728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hepatocyte growth factor","synonyms":[{"name":"response to HGF stimulus","type":"exact"},{"name":"response to hepatocyte growth factor stimulus","type":"exact"}],"termid":"GO:0035728"}


id: SO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any extent of continuous biological sequence.","definition_xrefs":["SO:ke","LAMHDI:mb"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_feature","synonyms":[{"name":"INSDC_feature:misc_feature","type":"exact"},{"name":"INSDC_note:other","type":"exact"},{"name":"INSDC_note:sequence_feature","type":"exact"},{"name":"located sequence feature","type":"related"},{"name":"located_sequence_feature","type":"exact"},{"name":"sequence feature","type":"exact"}],"termid":"SO:0000110"}


id: PBO:0052896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-7","termid":"PBO:0052896"}


id: PR:P41892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc7 gene.","definition_xrefs":["UniProtKB:P41892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.06c","synonyms":[{"name":"Spom972h-cdc7","type":"exact"}],"termid":"PR:P41892"}


id: GO:0071519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of actin filament bundle formation that occurs in the context of assembling an actomyosin contractile ring during cytokinesis.","definition_xrefs":["PMID:19713940","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0044085","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"actomyosin contractile ring actin filament bundle assembly","synonyms":[{"name":"actin filament bundle assembly involved in actomyosin contractile ring formation","type":"related"},{"name":"actin filament bundle assembly involved in cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:0071519"}


id: GO:2000304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ceramide biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sphingolipid biosynthetic process","termid":"GO:0090154"},{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"positively_regulates","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006629"],"is_obsolete":false,"name":"positive regulation of ceramide biosynthetic process","synonyms":[{"name":"positive regulation of ceramide anabolism","type":"exact"},{"name":"positive regulation of ceramide biosynthesis","type":"exact"},{"name":"positive regulation of ceramide formation","type":"exact"},{"name":"positive regulation of ceramide synthesis","type":"exact"}],"termid":"GO:2000304"}


id: PBO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_developmentally_induce","termid":"PBO:0034177"}


id: PBO:0065715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PVR related immunoglobulin domain containing 2, pseudogene","termid":"PBO:0065715"}


id: PBO:0062214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AL member 1 (gene/pseudogene)","termid":"PBO:0062214"}


id: PBO:0082554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane","termid":"PBO:0082554"}


id: GO:0030987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a high molecular weight kininogen receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"high molecular weight kininogen receptor binding","termid":"GO:0030987"}


id: GO:0090639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY-6826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol","termid":"GO:0090639"}


id: PBO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transporter Atm1","termid":"PBO:0002170"}


id: PBO:0051784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F2","termid":"PBO:0051784"}


id: PR:P0CT64
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.14","synonyms":[{"name":"Spom972h-rps1601","type":"exact"}],"termid":"PR:P0CT64"}


id: GO:0102561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + D-ribofuranose 2,5-bisphosphate = hydrogenphosphate + D-ribofuranose 5-phosphate.","definition_xrefs":["GOC:pz","RHEA:41616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"D-ribose 2,5-bisphosphate 2-phosphohydrolase activity","secondary_identifiers":["EC:3.1.4.57","MetaCyc:RXN-14996"],"termid":"GO:0102561"}


id: GO:0019262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylneuraminate metabolic process","termid":"GO:0006054"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"N-acetylneuraminate catabolic process","secondary_identifiers":["MetaCyc:P441-PWY"],"synonyms":[{"name":"N-acetylneuraminate breakdown","type":"exact"},{"name":"N-acetylneuraminate catabolism","type":"exact"},{"name":"N-acetylneuraminate degradation","type":"exact"}],"termid":"GO:0019262"}


id: GO:0034367
data:
  {"annotated_genes":["SJAG_00116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001113"}]},"cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:mtg_mpo","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-containing complex remodeling","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"macromolecular complex remodeling","type":"related"},{"name":"macromolecular complex remodelling","type":"related"},{"name":"protein-containing complex remodelling","type":"exact"}],"termid":"GO:0034367","terms_by_termid":{"GO:0001113":null}}


id: PBO:0057318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518e","termid":"PBO:0057318"}


id: GO:1905115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral attachment of mitotic spindle microtubules to kinetochore.","definition_xrefs":["PMID:22375062","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902423"},{"relation_name":"regulates","term_name":"lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0099607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"regulation of lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1905115"}


id: PBO:0088680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi mannan polymerase I complex subunit Anp1","termid":"PBO:0088680"}


id: PBO:0069729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1010, pseudogene","termid":"PBO:0069729"}


id: PBO:0077924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 15","termid":"PBO:0077924"}


id: PBO:0059979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 24","termid":"PBO:0059979"}


id: GO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate + L-cysteine + L-valine + 3 ATP + H2O = N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 AMP + 3 diphosphate + 6 H+.","definition_xrefs":["RHEA:23196","EC:6.3.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase activity","secondary_identifiers":["KEGG_REACTION:R04870","MetaCyc:6.3.2.26-RXN"],"synonyms":[{"name":"ACV synthetase activity","type":"broad"},{"name":"L-2-aminohexanedioate:L-cysteine:L-valine ligase (AMP-forming, valine-inverting)","type":"related"},{"name":"L-alpha-aminoadipyl-cysteinyl-valine synthetase activity","type":"related"},{"name":"L-delta-(alpha-aminoadipoyl)-L-cysteinyl-D-valine synthetase activity","type":"related"}],"termid":"GO:0050564"}


id: PBO:0063693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein geranylgeranyltransferase type I subunit beta","termid":"PBO:0063693"}


id: GO:2000771
data:
  {"annotated_genes":["SJAG_00845","SJAG_04522","SJAG_00661","SJAG_02536","SJAG_01799","SJAG_04461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102802,111602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[89156,95465,100567,98953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or maintenance of cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"positively_regulates","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02536":null,"SJAG_04461":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment or maintenance of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000771","terms_by_termid":{"GO:2000247":null,"GO:2000784":null}}


id: PBO:0041478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 71","termid":"PBO:0041478"}


id: PBO:0064777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase 2","termid":"PBO:0064777"}


id: GO:0005501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a retinoid, a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"retinoid binding","secondary_identifiers":["Reactome:R-HSA-2465934","Reactome:R-HSA-2464809","Reactome:R-HSA-2454113","Reactome:R-HSA-2465938"],"termid":"GO:0005501"}


id: PBO:0088047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme variant; involved in error-free postreplication repair; forms a heteromeric complex with Ubc13p, an active ubiquitin-conjugating enzyme; cooperates with chromatin-associated RING finger proteins, Rad18p and Rad5p; protein abundance increases in response to DNA replication stress","termid":"PBO:0088047"}


id: PR:Q9UU88
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylate kinase isoenzyme 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12595:SF0","PRO:DNx","OMA:SCHPO04983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase isoenzyme 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.11c","secondary_identifiers":["UniProtKB:Q9UU88"],"synonyms":[{"name":"AK/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AK6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AK6","type":"exact"},{"name":"dual activity adenylate kinase/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU88"}


id: PBO:0053128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte cytosolic protein 2","termid":"PBO:0053128"}


id: PBO:0012569
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae YPT1","termid":"PBO:0012569"}


id: GO:0075226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in an encysted zoospore, that germinates by developing a germ tube that may penetrate the host directly or indirectly through an appressorium. An encysted zoospore is a zoospore which has shed its flagellum and whose membrane has fused to form a walled cyst. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"encysted zoospore germination","synonyms":[{"name":"encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075226"}


id: GO:0015550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of galacturonate from one side of a membrane to the other. Galacturonate is the uronic acid formally derived from galactose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"galacturonate transmembrane transporter activity","termid":"GO:0015550"}


id: PBO:0028626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_shmoo_tip","termid":"PBO:0028626"}


id: PBO:0038390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_severity","termid":"PBO:0038390"}


id: PBO:0042914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFLAR antisense RNA 1","termid":"PBO:0042914"}


id: PBO:0057320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519a-1","termid":"PBO:0057320"}


id: PBO:0016562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein Nap2","termid":"PBO:0016562"}


id: FYPO:0001877
data:
  {"alleles_by_uniquename":{"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114041,114042,114048],"is_not":false,"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but has an abnormally low thickness or diameter.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"thin cell","termid":"FYPO:0001879"},{"relation_name":"is_a","term_name":"thin cell","termid":"FYPO:0001879"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"viable thin vegetative cell","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_03581","SJAG_04280"],"single_locus_genotype_uniquenames":["cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"thin viable vegetative cell","type":"exact"},{"name":"viable thin cell during vegetative growth","type":"exact"},{"name":"viable thin vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable vegetative cell with decreased cell diameter","type":"exact"},{"name":"viable vegetative cell with decreased cell thickness","type":"exact"},{"name":"viable vegetative cell with decreased cell width","type":"exact"}],"termid":"FYPO:0001877","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001877":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 35","termid":"PBO:0050218"}


id: PBO:0083024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; originally included in genome annotation, but later deleted due to sequence correction","termid":"PBO:0083024"}


id: PBO:0054686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2094","termid":"PBO:0054686"}


id: PBO:0031545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting","termid":"PBO:0031545"}


id: PBO:0058567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6509","termid":"PBO:0058567"}


id: PBO:0079663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 11","termid":"PBO:0079663"}


id: PBO:0050959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 2","termid":"PBO:0050959"}


id: FYPO:0005237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-proline measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular proline level","synonyms":[{"name":"increased cellular L-proline level","type":"exact"},{"name":"increased cellular proline level during mitotic cell cycle","type":"related"},{"name":"increased cellular proline level during vegetative growth","type":"exact"},{"name":"increased proline accumulation","type":"related"}],"termid":"FYPO:0005237"}


id: PBO:0062786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 1","termid":"PBO:0062786"}


id: PBO:0078955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformation/transcription domain associated protein","termid":"PBO:0078955"}


id: PBO:0060423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 2","termid":"PBO:0060423"}


id: RO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x does not overlaps the sequence of x if and only if there is no z such that x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does_not_overlap_sequence_of","termid":"RO:0002527"}


id: GO:0019392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucarate, the dianion of glucaric acid, an aldaric acid derived from either glucose or gulose. There are two enantiomers L- and D-glucarate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucarate metabolic process","secondary_identifiers":["GO:0019581"],"synonyms":[{"name":"glucarate metabolism","type":"exact"}],"termid":"GO:0019392"}


id: PR:Q9Y7Z9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquinone biosynthesis monooxygenase COQ6, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13789:SF5","OMA:SCHPO02680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis monooxygenase COQ6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.12","secondary_identifiers":["UniProtKB:Q9Y7Z9"],"synonyms":[{"name":"Spom972h-COQ6","type":"exact"}],"termid":"PR:Q9Y7Z9"}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: PBO:0065978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA1 related single stranded DNA binding protein, X-linked","termid":"PBO:0065978"}


id: PBO:0090265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER ubiquitin-protein ligase E3 Doa10","termid":"PBO:0090265"}


id: GO:0005989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose metabolic process","termid":"GO:0005988"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lactose biosynthetic process","synonyms":[{"name":"lactose anabolism","type":"exact"},{"name":"lactose biosynthesis","type":"exact"},{"name":"lactose formation","type":"exact"},{"name":"lactose synthesis","type":"exact"}],"termid":"GO:0005989"}


id: PBO:0027265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_pheromone","termid":"PBO:0027265"}


id: GO:0005543
data:
  {"annotated_genes":["SJAG_00907","SJAG_04001","SJAG_01437","SJAG_03851","SJAG_02852","SJAG_00368","SJAG_00314","SJAG_02166","SJAG_16459","SJAG_01143","SJAG_00638","SJAG_01748","SJAG_02989","SJAG_00724","SJAG_01863","SJAG_01229","SJAG_00821","SJAG_02248","SJAG_00216","SJAG_01783","SJAG_02414","SJAG_02902","SJAG_01309","SJAG_04644","SJAG_01564","SJAG_00971","SJAG_04221","SJAG_03596","SJAG_04275","SJAG_04960","SJAG_01135","SJAG_02492","SJAG_00663","SJAG_02657","SJAG_01519","SJAG_05179","SJAG_01794","SJAG_04077","SJAG_01722","SJAG_01382","SJAG_00173","SJAG_02468","SJAG_03756","SJAG_01945","SJAG_03563","SJAG_00152","SJAG_00118","SJAG_04963","SJAG_02587","SJAG_04010","SJAG_04219","SJAG_02728","SJAG_01516","SJAG_02392","SJAG_03250","SJAG_03970","SJAG_00946","SJAG_02177","SJAG_04024","SJAG_01769","SJAG_04417","SJAG_02572","SJAG_02274","SJAG_02912","SJAG_00115","SJAG_04600","SJAG_00467","SJAG_00268","SJAG_05245","SJAG_03405","SJAG_01324","SJAG_04413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78527,83658,87292,88017,91782,97062,98514,99303,99541,100622,101942,107404,113621,113879],"is_not":false,"summary":null,"term":"GO:0005543"},{"annotations":[73049,103385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005545"},{"annotations":[101412,101794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901612"},{"annotations":[101414,101798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070300"},{"annotations":[69853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031210"},{"annotations":[70351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008429"},{"annotations":[73324,76180,77053,87725,92805,100191,102556,62665,102819,107952,112537,103911,88900,98679,94302,71902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035091"},{"annotations":[91236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901981"},{"annotations":[83627,112450,97687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[71551,78344,72879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[91310,104792,104939,86073,72876,70401,78341,72586,107555,105133,94995,95131,71549,95132,86957,100058,110268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[83559,97043,101799,109940,73050,112041,113907,85127,94641,97191,86235,94609,113449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[97688,107595,89908,94610,76373,95409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"},{"annotations":[97689,83560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001786"}]},"cv_name":"molecular_function","definition":"Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid 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binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005543","terms_by_termid":{"GO:0001786":null,"GO:0005543":null,"GO:0005545":null,"GO:0005546":null,"GO:0005547":null,"GO:0008429":null,"GO:0031210":null,"GO:0032266":null,"GO:0035091":null,"GO:0070273":null,"GO:0070300":null,"GO:0080025":null,"GO:1901612":null,"GO:1901981":null}}


id: PBO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein","termid":"PBO:0061000"}


id: CHEBI:26710
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An inorganic chloride salt having sodium(1+) as the counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium chloride","termid":"CHEBI:26710"}


id: GO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by removal of a single nucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide deletion","synonyms":[{"name":"RNA nucleotide excision","type":"exact"}],"termid":"GO:0070706"}


id: PBO:0073795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 2","termid":"PBO:0073795"}


id: FYPO:0003071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a single-stranded DNA 5'-3' exodeoxyribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"},{"relation_name":"is_a","term_name":"abolished nuclease activity","termid":"FYPO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished single-stranded DNA 5'-3' exodeoxyribonuclease activity","synonyms":[{"name":"single-stranded DNA 5'-3' exodeoxyribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0003071"}


id: FYPO:0003722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the removal of leader sequences to generate the mature 5'-end of a tRNA occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased tRNA 5'-leader removal","synonyms":[{"name":"decreased tRNA 5'-leader removal during mitotic cell cycle","type":"related"},{"name":"decreased tRNA 5'-leader removal during vegetative growth","type":"exact"},{"name":"reduced tRNA 5'-leader removal","type":"related"}],"termid":"FYPO:0003722"}


id: PBO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitosis","termid":"PBO:0035779"}


id: GO:0044282
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