# terms

id: GO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"regulation of TLR11 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034171"}


id: PBO:0069251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 506, pseudogene","termid":"PBO:0069251"}


id: PBO:0038856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 3","termid":"PBO:0038856"}


id: GO:0002055
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73274],"is_not":false,"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to adenine, a purine base.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase binding","termid":"GO:0002060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adenine binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"6-aminopurine binding","type":"exact"}],"termid":"GO:0002055","terms_by_termid":{"GO:0002055":null}}


id: PBO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_divided_germinated_spores_(obsolete_FYPO:0000319)","termid":"PBO:0031058"}


id: PBO:0109456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34, human ZNRF3 homolog","termid":"PBO:0109456"}


id: GO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the phagosome, measured by the concentration of the hydrogen ion, as part of the process of phagosome maturation.","definition_xrefs":["PMID:22008230","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phagosome reneutralization","synonyms":[{"name":"phagosomal reneutralization","type":"exact"},{"name":"phagosome pH elevation","type":"exact"}],"termid":"GO:0044655"}


id: PBO:0051070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-12","termid":"PBO:0051070"}


id: GO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell membrane of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"other organism part","termid":"GO:0044217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism cell membrane","secondary_identifiers":["GO:0044279"],"synonyms":[{"name":"foreign membrane","type":"related"},{"name":"other organism membrane","type":"broad"}],"termid":"GO:0044218"}


id: PBO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, UPF0047 family","termid":"PBO:0001602"}


id: PBO:0048785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA14 antisense RNA 1","termid":"PBO:0048785"}


id: PBO:0064628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPAN-P2RY11 readthrough","termid":"PBO:0064628"}


id: PR:O13647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8D2.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8D2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.11","synonyms":[{"name":"Spom972h-SPBC8D2.11","type":"exact"}],"termid":"PR:O13647"}


id: FYPO:0005862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MTREC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abolished MTREC complex binding","synonyms":[{"name":"MTREC complex binding abolished","type":"exact"},{"name":"abolished NURS complex binding","type":"exact"}],"termid":"FYPO:0005862"}


id: PBO:0040926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 1","termid":"PBO:0040926"}


id: GO:0052767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the alpha-(1->6) bonds of alpha-D-mannose residues in mannosyl-oligosaccharide.","definition_xrefs":["GOC:mengo_curators","PMID:1849817","PMID:2338081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,6-alpha-mannosidase activity","synonyms":[{"name":"1,6-alpha-mannosidase activity","type":"broad"},{"name":"1,6-alpha-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"exact"},{"name":"alpha-1,6-mannosidase activity","type":"broad"},{"name":"alpha-1,6-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"exact"}],"termid":"GO:0052767"}


id: GO:0019841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"retinol binding","synonyms":[{"name":"vitamin A1 alcohol binding","type":"exact"},{"name":"vitamin A1 binding","type":"exact"}],"termid":"GO:0019841"}


id: RO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","termid":"RO:0002204"}


id: PBO:0073609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase 1","termid":"PBO:0073609"}


id: PBO:0085613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex","termid":"PBO:0085613"}


id: PR:Q9USJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.02c gene.","definition_xrefs":["UniProtKB:Q9USJ2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein got1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.02c","synonyms":[{"name":"Golgi transport protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.02c","type":"exact"}],"termid":"PR:Q9USJ2"}


id: PBO:0038540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD14A-ACY1 readthrough","termid":"PBO:0038540"}


id: GO:0071062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to vitronectin.","definition_xrefs":["PMID:10835423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-vitronectin complex","synonyms":[{"name":"ITGAV-ITGB3-VTN complex","type":"narrow"}],"termid":"GO:0071062"}


id: PBO:0069289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 545, pseudogene","termid":"PBO:0069289"}


id: PBO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle_pole_body_organization","termid":"PBO:0033755"}


id: PBO:0005034
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.8.1.6","termid":"PBO:0005034"}


id: GO:0097685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell surface furrow (or groove) found on a dinoflagellate apex. It typically loops around the apex.","definition_xrefs":["ISBN:0632009152","GOC:at","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface furrow","termid":"GO:0097610"},{"relation_name":"part_of","term_name":"dinoflagellate epicone","termid":"GO:0097613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical groove","synonyms":[{"name":"apical groove","type":"broad"}],"termid":"GO:0097685"}


id: PBO:0075937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 2","termid":"PBO:0075937"}


id: PBO:0073846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A1","termid":"PBO:0073846"}


id: PBO:0045946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonal Fyn-associated substrate","termid":"PBO:0045946"}


id: PBO:0059848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1","termid":"PBO:0059848"}


id: GO:0061029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the eyelid in a camera-type eye from its formation to the mature state. The eyelid is a membranous cover that helps protect and lubricate the eye.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eyelid development in camera-type eye","termid":"GO:0061029"}


id: PBO:0038397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_during","termid":"PBO:0038397"}


id: PBO:0052578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinocilin","termid":"PBO:0052578"}


id: GO:0102635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-deoxycorticosterone + NADH + H+ = 4-pregnen-20,21-diol-3-one + NAD.","definition_xrefs":["GOC:pz","HEA:47716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"11-deoxycorticosterone reductase activity","secondary_identifiers":["MetaCyc:RXN-15607","RHEA:47716"],"termid":"GO:0102635"}


id: PBO:0044551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 2","termid":"PBO:0044551"}


id: PBO:0043304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin like 1, pseudogene","termid":"PBO:0043304"}


id: GO:0062200
data:
  {"annotated_genes":["SJAG_00333","SJAG_00236","SJAG_00661","SJAG_00317","SJAG_03637","SJAG_04461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86608,95467,100569,107570,108140,113722],"is_not":false,"summary":null,"term":"GO:0062200"}]},"cv_name":"biological_process","definition":"An intracellular signaling cascade that starts with the activation of S. cerevisiae Kic1p, which activate Mob2p and Cbk1p. Cbk1p phosphorylates Ace2p, which results in its nuclear translocation, where it regulates transcription of genes involved in polarity and morphogenesis.","definition_xrefs":["PMID:15731009","PMID:16096637","PMID:20805322","PMID:20826805","PMID:21246752","PMID:22629372","PMID:23212898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00661":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"RAM/MOR signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MOR signaling pathway","type":"narrow"},{"name":"RAM signaling pathway","type":"narrow"},{"name":"RAM/MOR signaling pathway","type":"exact"},{"name":"morphogenesis Orb6 network","type":"exact"}],"termid":"GO:0062200","terms_by_termid":{"GO:0062200":null}}


id: PBO:0064371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral myelin protein 2","termid":"PBO:0064371"}


id: PBO:0043182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 2","termid":"PBO:0043182"}


id: PBO:0072971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 1","termid":"PBO:0072971"}


id: GO:0140956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl79-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of up to three methyl group to the lysine residue at position 79 of the histone H3 protein, producing H3K79me3.","definition_xrefs":["PMID:15371351","RHEA:60328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0008276","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"histone H3K79 trimethyltransferase activity","secondary_identifiers":["EC:2.1.1.360"],"synonyms":[{"name":"histone H3-K79 trimethylation","type":"broad"},{"name":"histone H3K79 trimethylase activity","type":"exact"},{"name":"histone H3K79 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone trimethylase activity (H3-K79 specific)","type":"exact"},{"name":"histone trimethyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone-H3K79 trimethyltransferase activity","type":"exact"}],"termid":"GO:0140956"}


id: PBO:0056178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFA antisense RNA 1","termid":"PBO:0056178"}


id: FYPO:0004921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:11402029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal positive regulation of protein kinase activity","synonyms":[{"name":"normal activation of protein kinase activity","type":"narrow"},{"name":"normal positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"normal positive regulation of protein kinase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004921"}


id: GO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of compound eye cone cell fate specification","termid":"GO:0042682"},{"relation_name":"negatively_regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0010000"],"synonyms":[{"name":"down regulation of cone cell fate specification","type":"broad"},{"name":"down-regulation of cone cell fate specification","type":"broad"},{"name":"downregulation of cone cell fate specification","type":"broad"},{"name":"inhibition of cone cell fate specification","type":"broad"},{"name":"suppression of cone cell fate","type":"broad"}],"termid":"GO:0042683"}


id: GO:0060840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the artery over time, from its initial formation to the mature structure. An artery is a blood vessel that carries blood away from the heart to a capillary bed.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"artery development","termid":"GO:0060840"}


id: PBO:0083317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF HSE1/YHL002W","termid":"PBO:0083317"}


id: PBO:0078036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 26","termid":"PBO:0078036"}


id: PBO:0086957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of peroxisome abundance; peroxisomal membrane protein, remote homolog to several curvature-generating human proteins; functionally interacts with vesicle-budding-inducing ADP-ribosylation factor Arf1p","termid":"PBO:0086957"}


id: FYPO:0004562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"binucleate aseptate vegetative cell","synonyms":[{"name":"binucleate aseptate cell during mitotic cell cycle","type":"related"},{"name":"binucleate aseptate cell during vegetative growth","type":"exact"},{"name":"dikaryosis","type":"related"}],"termid":"FYPO:0004562"}


id: PBO:0040985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 family apoptosis regulator BOK","termid":"PBO:0040985"}


id: PBO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha o1","termid":"PBO:0048794"}


id: PBO:0077762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 4","termid":"PBO:0077762"}


id: GO:0036183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"asperthecin metabolic process","termid":"GO:0036182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"quinone catabolic process","termid":"GO:1901662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"asperthecin catabolic process","synonyms":[{"name":"asperthecin breakdown","type":"exact"},{"name":"asperthecin catabolism","type":"exact"},{"name":"asperthecin degradation","type":"exact"}],"termid":"GO:0036183"}


id: PBO:0090687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc53","termid":"PBO:0090687"}


id: PBO:0047021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24, pseudogene","termid":"PBO:0047021"}


id: GO:1902020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:cilia","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium-dependent cell motility","termid":"GO:1902019"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"negatively_regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cilium-dependent cell motility","synonyms":[{"name":"down regulation of ciliary cell motility","type":"exact"},{"name":"down-regulation of ciliary cell motility","type":"exact"},{"name":"downregulation of ciliary cell motility","type":"exact"},{"name":"inhibition of ciliary cell motility","type":"narrow"},{"name":"negative regulation of ciliary cell motility","type":"related"},{"name":"negative regulation of cilium cell motility","type":"exact"}],"termid":"GO:1902020"}


id: GO:0098893
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic endocytic zone membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"},{"relation_name":"part_of","term_name":"postsynaptic endocytic zone membrane","termid":"GO:0098844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of postsynaptic endocytic zone","termid":"GO:0098893"}


id: GO:0034820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3E,1Z)-4,5-9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate + H2O = (2E,4E)-2-hydroxyhexa-2,4-dienoate + 9,17-dioxo-1,2,3,4,10,19-hexanorandrostan-5-oate + H+.","definition_xrefs":["UM-BBD_reactionID:r1152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"4,9-DSHA hydrolase activity","termid":"GO:0034820"}


id: PBO:0053923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1220","termid":"PBO:0053923"}


id: PBO:0033806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telomeric_3'_overhang_absent","termid":"PBO:0033806"}


id: GO:0009317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the first step in long-chain fatty acid biosynthesis. For example, in E. coli the complex is heterohexameric and composed of biotin carbonyl carrier protein, biotin carboxylase and the acetate CoA-transferase complex.","definition_xrefs":["PMID:12121720","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acetyl-CoA carboxylase complex","synonyms":[{"name":"ACCase complex","type":"exact"}],"termid":"GO:0009317"}


id: SO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide match against a sequence from another organism.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cross_genome_match","synonyms":[{"name":"cross genome match","type":"exact"}],"termid":"SO:0000177"}


id: PBO:0003998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, calcium binding subfamily (predicted)","termid":"PBO:0003998"}


id: GO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thrombospondin and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:vk","GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombospondin receptor activity","termid":"GO:0070053"}


id: PBO:0089294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOTS complex subunit, serine palmitoyltransferase activator Tsc3","termid":"PBO:0089294"}


id: PBO:0038626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical chemokine receptor 2","termid":"PBO:0038626"}


id: PBO:0040574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-glucuronyltransferase 1","termid":"PBO:0040574"}


id: PR:O13930
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2 gene.","definition_xrefs":["UniProtKB:O13930","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rab guanine nucleotide exchange factor sec2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.10","synonyms":[{"name":"GDP-GTP exchange factor sec2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sec2","type":"exact"}],"termid":"PR:O13930"}


id: PBO:0073988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 2","termid":"PBO:0073988"}


id: GO:0018759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H2O = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + H+.","definition_xrefs":["RHEA:19053","EC:3.5.4.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"methenyltetrahydromethanopterin cyclohydrolase activity","secondary_identifiers":["KEGG_REACTION:R03464","UM-BBD_reactionID:r0347","MetaCyc:3.5.4.27-RXN"],"synonyms":[{"name":"5,10-methenyltetrahydromethanopterin 10-hydrolase (decyclizing)","type":"related"},{"name":"5,10-methenyltetrahydromethanopterin cyclohydrolase activity","type":"related"},{"name":"N5,N10-methenyltetrahydromethanopterin cyclohydrolase activity","type":"related"},{"name":"methenyl-H(4)MPT cyclohydrolase activity","type":"related"},{"name":"methenyl-H4MPT cyclohydrolase activity","type":"related"}],"termid":"GO:0018759"}


id: GO:1902721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prolactin secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16159377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"prolactin secretion","termid":"GO:0070459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of prolactin secretion","synonyms":[{"name":"down regulation of prolactin secretion","type":"exact"},{"name":"down-regulation of prolactin secretion","type":"exact"},{"name":"downregulation of prolactin secretion","type":"exact"},{"name":"inhibition of prolactin secretion","type":"narrow"}],"termid":"GO:1902721"}


id: GO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 36 of histone H3.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K36 methylation (obsolete GO:0000416)","synonyms":[{"name":"activation of histone H3-K36 methylation","type":"narrow"},{"name":"stimulation of histone H3-K36 methylation","type":"narrow"},{"name":"up regulation of histone H3-K36 methylation","type":"exact"},{"name":"up-regulation of histone H3-K36 methylation","type":"exact"},{"name":"upregulation of histone H3-K36 methylation","type":"exact"}],"termid":"GO:0000416"}


id: PBO:0043442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 2","termid":"PBO:0043442"}


id: PBO:0027222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved,_elongated,_swollen_vegetative_cell","termid":"PBO:0027222"}


id: GO:0017171
data:
  {"annotated_genes":["SJAG_00984","SJAG_00975","SJAG_03261","SJAG_03910","SJAG_02565","SJAG_05286","SJAG_01285","SJAG_01868","SJAG_03760","SJAG_02432","SJAG_03121","SJAG_04398","SJAG_04928","SJAG_04819","SJAG_03258","SJAG_00737","SJAG_02809","SJAG_01136","SJAG_04785","SJAG_03648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88446],"is_not":false,"summary":null,"term":"GO:0017171"},{"annotations":[74611,75184,77834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[77927,75244,89564,104354,96580,103261,73572,87059,99078,74591,99072,113391,74052,88687,76048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[84667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008236"},{"annotations":[73347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["Wikipedia:Serine_hydrolase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03760":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"serine hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017171","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null,"GO:0017171":null}}


id: GO:2000250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of actin cytoskeleton reorganization.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actin cytoskeleton reorganization (obsolete GO:2000250)","synonyms":[{"name":"negative regulation of actin cytoskeleton remodeling","type":"exact"},{"name":"negative regulation of actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:2000250"}


id: PBO:0088560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hikeshi family nuclear import carrier Opi10","termid":"PBO:0088560"}


id: PBO:0056110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 1","termid":"PBO:0056110"}


id: PBO:0053345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 226","termid":"PBO:0053345"}


id: PBO:0082333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter; multidrug transporter involved in multiple drug resistance; mediates sterol uptake when sterol biosynthesis is compromised; regulated by Pdr1p; required for anaerobic growth; PDR11 has a paralog, AUS1, that arose from the whole genome duplication","termid":"PBO:0082333"}


id: PBO:0059432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A3","termid":"PBO:0059432"}


id: GO:0031150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sorocarp stalk over time, from its formation to the mature structure. The sorocarp stalk is a tubular structure that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["PMID:4338436","GOC:mtg_sensu","ISBN:0521583640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"culmination involved in sorocarp development","termid":"GO:0031154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp stalk development","synonyms":[{"name":"sorophore development","type":"exact"},{"name":"stalk development","type":"broad"},{"name":"stalk formation","type":"broad"}],"termid":"GO:0031150"}


id: PBO:0068288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease K","termid":"PBO:0068288"}


id: PBO:0027946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitosis","termid":"PBO:0027946"}


id: PBO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 5","termid":"PBO:0070470"}


id: PBO:0074970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-12","termid":"PBO:0074970"}


id: PR:O42922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.17c gene.","definition_xrefs":["UniProtKB:O42922","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C16A3.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.17c","synonyms":[{"name":"Spom972h-SPBC16A3.17c","type":"exact"}],"termid":"PR:O42922"}


id: GO:1902291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"DNA-dependent DNA replication DNA ligation","termid":"GO:0051104"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"cell cycle DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902291"}


id: PBO:0091616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Isp5","termid":"PBO:0091616"}


id: GO:0032411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a transporter.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"},{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transporter activity","synonyms":[{"name":"activation of transporter activity","type":"narrow"},{"name":"stimulation of transporter activity","type":"narrow"},{"name":"up regulation of transporter activity","type":"exact"},{"name":"up-regulation of transporter activity","type":"exact"},{"name":"upregulation of transporter activity","type":"exact"}],"termid":"GO:0032411"}


id: GO:0170043
data:
  {"annotated_genes":["SJAG_01019","SJAG_00412","SJAG_00636","SJAG_00832","SJAG_00695","SJAG_00964","SJAG_01592","SJAG_00635","SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71523,77091,71014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"},{"annotations":[75808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[98878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[93496,75596,113340,71977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of non-proteinogenic amino acids.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_00832":null,"SJAG_00964":null,"SJAG_01019":null,"SJAG_01592":null,"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"non-proteinogenic amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"non-proteinogenic amino acid anabolism","type":"exact"},{"name":"non-proteinogenic amino acid formation","type":"exact"},{"name":"non-proteinogenic amino acid synthesis","type":"exact"},{"name":"non-proteinogenic biosynthesis","type":"exact"}],"termid":"GO:0170043","terms_by_termid":{"GO:0006592":null,"GO:0019240":null,"GO:0052707":null,"GO:0071269":null}}


id: PBO:0059508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block I","termid":"PBO:0059508"}


id: PBO:0035798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0035798"}


id: PBO:0043717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 5","termid":"PBO:0043717"}


id: PBO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8A","termid":"PBO:0043664"}


id: GO:0097649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complete microtubule with 13 protofilaments that fuses with an incomplete microtubule called B tubule (containing 10 protofilaments only) to form an axonemal outer doublet. Inner and outer dynein arms, as well as the radial spoke, are attached to the A tubule.","definition_xrefs":["GOC:cilia","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal outer doublet","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"A axonemal microtubule","synonyms":[{"name":"A tubule","type":"broad"}],"termid":"GO:0097649"}


id: PBO:0082016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZW10 interacting kinetochore protein","termid":"PBO:0082016"}


id: PBO:0053784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1035","termid":"PBO:0053784"}


id: PATO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which is equal to the mass exerting an influence on a one-dimensional object.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Linear_density"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear density","termid":"PATO:0001352"}


id: PBO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Slt1","termid":"PBO:0002138"}


id: GO:0103047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl beta-D-glucoside 6-phosphate + H2O = beta-D-glucose 6-phosphate + methanol.","definition_xrefs":["GOC:pz","EC:3.2.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"methyl beta-D-glucoside 6-phosphate glucohydrolase activity","secondary_identifiers":["MetaCyc:RXN0-6994"],"termid":"GO:0103047"}


id: GO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mitotic cell cycle checkpoint that detects whether chromosome segregation is complete and negatively regulates cytokinesis following mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis after mitosis checkpoint (obsolete GO:0000078)","synonyms":[{"name":"cell morphogenesis checkpoint","type":"exact"},{"name":"cell shape checkpoint","type":"exact"}],"termid":"GO:0000078"}


id: GO:0016802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a thioether bond, -S-.","definition_xrefs":["EC:3.3.1.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ether bonds","termid":"GO:0016801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"trialkylsulfonium hydrolase activity","synonyms":[{"name":"thioether hydrolase activity","type":"exact"},{"name":"trialkylsulphonium hydrolase activity","type":"exact"}],"termid":"GO:0016802"}


id: GO:0033982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate 6-phosphate + H+ = L-xylulose 5-phosphate + CO2.","definition_xrefs":["EC:4.1.1.85","RHEA:14353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-dehydro-L-gulonate-6-phosphate decarboxylase activity","secondary_identifiers":["MetaCyc:RXN0-705","KEGG_REACTION:R07125"],"synonyms":[{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase (L-xylulose-5-phosphate-forming) activity","type":"related"},{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate 6-phosphate decarboxylase activity","type":"related"},{"name":"KGPDC","type":"related"},{"name":"SgaH","type":"related"},{"name":"SgbH","type":"related"},{"name":"UlaD","type":"related"}],"termid":"GO:0033982"}


id: GO:0043837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + H2O + NAD+ = 3-methyl-2-oxobutanoate + NH3 + NADH.","definition_xrefs":["PMID:10612726","PMID:2803248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"valine dehydrogenase (NAD) activity","secondary_identifiers":["RHEA:30763","EC:1.4.1.23"],"synonyms":[{"name":"ValDH","type":"related"}],"termid":"GO:0043837"}


id: PBO:0042000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 51","termid":"PBO:0042000"}


id: PATO:0000930
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000930 light_quality sensitivity (obsolete PATO:0000930)","termid":"PATO:0000930"}


id: PBO:0004435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A","termid":"PBO:0004435"}


id: FYPO:0006876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex of the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:29249658","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to cell cortex of cell tip","synonyms":[{"name":"normal protein localisation to cell cortex of cell tip","type":"exact"},{"name":"normal protein localization to cell tip cortex","type":"exact"}],"termid":"FYPO:0006876"}


id: PBO:0062288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily L member 1","termid":"PBO:0062288"}


id: GO:0072380
data:
  {"annotated_genes":["SJAG_03865","SJAG_01496"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83493,110143],"is_not":false,"summary":null,"term":"GO:0072380"}]},"cv_name":"cellular_component","definition":"A protein complex found in yeast that contains GET4, MDY2 (GET5), SGT2, and at least two heat shock proteins, HSP104 and YBR137W. The TRC complex transfers tail-anchored (TA) proteins to GET3 for targeting to the endoplasmic reticulum membrane.","definition_xrefs":["PMID:20850366","PMID:23142665","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01496":null,"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"TRC complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GET4-GET5 transmembrane domain recognition complex","type":"related"},{"name":"TMD recognition complex","type":"exact"}],"termid":"GO:0072380","terms_by_termid":{"GO:0072380":null}}


id: PR:P56288
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02228","PRO:DNx","PANTHER:PTHR22572:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.09","secondary_identifiers":["UniProtKB:P56288"],"synonyms":[{"name":"Spom972h-EIF2B3","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56288"}


id: PBO:0079883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B","termid":"PBO:0079883"}


id: SO:0000959
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_DNA_chromosome","synonyms":[{"name":"linear single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000959"}


id: FYPO:0006665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagy of the nucleus occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PMID:30116786","GO:0044804","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased nucleophagy during G0","synonyms":[{"name":"increased autophagy of nucleus during G0","type":"exact"},{"name":"increased nucleophagy during cell quiescence","type":"exact"},{"name":"increased nucleophagy during quiescence","type":"exact"}],"termid":"FYPO:0006665"}


id: PBO:0091471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbose reductase","termid":"PBO:0091471"}


id: GO:0120278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebral blood circulation","termid":"GO:0120276"},{"relation_name":"is_a","term_name":"negative regulation of blood circulation","termid":"GO:1903523"},{"relation_name":"negatively_regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cerebral blood circulation","synonyms":[{"name":"down regulation of cerebral blood circulation","type":"exact"},{"name":"down-regulation of cerebral blood circulation","type":"exact"},{"name":"downregulation of cerebral blood circulation","type":"exact"},{"name":"inhibition of cerebral blood circulation","type":"narrow"},{"name":"negative regulation of cerebrum blood circulation","type":"exact"},{"name":"negative regulation of telencephalon blood circulation","type":"exact"}],"termid":"GO:0120278"}


id: PBO:0079264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 36","termid":"PBO:0079264"}


id: PBO:0077757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 20 like","termid":"PBO:0077757"}


id: PBO:0109825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex/NuA4 histone acetyltransferase complex subunit Swc4","termid":"PBO:0109825"}


id: SO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The variable region of an immunoglobulin polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_region","termid":"SO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"V_region","synonyms":[{"name":"INSDC_feature:V_region","type":"exact"},{"name":"V region","type":"exact"}],"termid":"SO:0001833"}


id: PBO:0040425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 2","termid":"PBO:0040425"}


id: _global:started_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is strted_by Y if Y is part_of X and X and Y share a 5' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"started_by","termid":"_global:started_by"}


id: GO:0005369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: taurine(out) + Na+(out) = taurine(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"taurine transmembrane transporter activity","termid":"GO:0005368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"taurine:sodium symporter activity","synonyms":[{"name":"sodium/chloride-dependent taurine transporter","type":"broad"}],"termid":"GO:0005369"}


id: MOD:00290
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-histidine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0285","PubMed:7854413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(N3'-histidinoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00290"}


id: PR:Q9HE11
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 43 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00869","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.01","secondary_identifiers":["UniProtKB:Q9HE11"],"synonyms":[{"name":"Spom972h-WDR43","type":"exact"},{"name":"U3 protein 5 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE11"}


id: PBO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element","termid":"PBO:0000991"}


id: PBO:0062568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AG member 1","termid":"PBO:0062568"}


id: GO:1905262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26653857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic DNA double-strand break formation","termid":"GO:1903342"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:1905261"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0140013","GO:0008150","GO:0007049","GO:0006310"],"is_obsolete":false,"name":"negative regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","synonyms":[{"name":"down regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"down-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"downregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"inhibition of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"narrow"}],"termid":"GO:1905262"}


id: GO:0140433
data:
  {"annotated_genes":["SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to a meiotic spindle pole body.","definition_xrefs":["PMID:22438582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"protein localization to meiotic spindle pole body","termid":"GO:1902441"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of protein localization to meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140433","terms_by_termid":{"GO:0140434":null}}


id: PR:Q09816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An S-methyl-5'-thioadenosine phosphorylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11904:SF1","PRO:DNx","OMA:SCHPO00309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5'-thioadenosine phosphorylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.02c","secondary_identifiers":["UniProtKB:Q09816"],"synonyms":[{"name":"5'-methylthioadenosine phosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTA phosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTAPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTAP","type":"exact"}],"termid":"PR:Q09816"}


id: SO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of the promoters of snRNA genes transcribed by RNA polymerase II or by RNA polymerase III. Located between -45 and -60 relative to the TSS. The human PSE_motif consensus sequence is TCACCNTNA(C|G)TNAAAAG(T|G). The basal transcription factor, snRNA-activating protein complex (SNAPc), binds the PSE_motif and is required for the transcription of both RNA polymerase II and III transcribed small-nuclear RNA genes.","definition_xrefs":["PMID:23166507","PMID:8339931","PMID:12621023","PMID:11390411","PMID:12651739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSE_motif","synonyms":[{"name":"PSE motif","type":"exact"},{"name":"proximal sequence element","type":"exact"}],"termid":"SO:0000017"}


id: PBO:0038507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 2","termid":"PBO:0038507"}


id: GO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["PMID:20951801","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"positively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"}


id: PBO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase Dak2","termid":"PBO:0000112"}


id: MOD:00074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:413571","RESID:AA0065","PubMed:2577730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated phenylalanine","termid":"MOD:01063"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-phenylalanine","synonyms":[{"name":"(2S)-2-methylamino-3-phenylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylphenylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-phenylalanine","type":"exact"},{"name":"N-methylated L-phenylalanine","type":"exact"},{"name":"N-methylphenylalanine","type":"exact"},{"name":"NMe1Phe","type":"exact"}],"termid":"MOD:00074"}


id: SO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_secondary_structure","synonyms":[{"name":"INSDC_feature:misc_structure","type":"exact"},{"name":"sequence secondary structure","type":"exact"}],"termid":"SO:0000002"}


id: PBO:0051001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 antisense RNA 1","termid":"PBO:0051001"}


id: PBO:0030795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0030795"}


id: GO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the mesonephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in mesonephros development","synonyms":[{"name":"mesonephros pattern formation","type":"related"},{"name":"mesonephros pattern specification","type":"exact"}],"termid":"GO:0061227"}


id: PBO:0026791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_pneumocandin_B0","termid":"PBO:0026791"}


id: PBO:0018110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght5","termid":"PBO:0018110"}


id: GO:0160020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:32015325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of ferroptosis","termid":"GO:0110075"},{"relation_name":"positively_regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferroptosis","termid":"GO:0160020"}


id: GO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region where the mating projection meets the bulk of the cell, in unicellular fungi exposed to mating pheromone.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection base","synonyms":[{"name":"base of shmoo tip","type":"narrow"},{"name":"conjugation tube base","type":"narrow"}],"termid":"GO:0001400"}


id: PBO:0012298
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligomeric","termid":"PBO:0012298"}


id: GO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine + H+.","definition_xrefs":["RHEA:10656","EC:2.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase activity","secondary_identifiers":["MetaCyc:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01883"],"synonyms":[{"name":"GA methylpherase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N-guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate transmethylase activity","type":"related"},{"name":"guanidoacetate methyltransferase activity","type":"related"},{"name":"methionine-guanidinoacetic transmethylase activity","type":"related"}],"termid":"GO:0030731"}


id: GO:1903390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle uncoating.","definition_xrefs":["GO_REF:0000058","PMID:21563316","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle uncoating","termid":"GO:1903388"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle uncoating","termid":"GO:0016191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle uncoating","synonyms":[{"name":"activation of synaptic vesicle coat depolymerization","type":"narrow"},{"name":"activation of synaptic vesicle coat protein depolymerization","type":"narrow"},{"name":"activation of synaptic vesicle uncoating","type":"narrow"},{"name":"positive regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"positive regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle uncoating","type":"exact"},{"name":"up-regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"up-regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up-regulation of synaptic vesicle uncoating","type":"exact"},{"name":"upregulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"upregulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"upregulation of synaptic vesicle uncoating","type":"exact"}],"termid":"GO:1903390"}


id: FYPO:0006657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which acid phosphatase activity is absent during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished acid phosphatase activity","termid":"FYPO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished acid phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"acid phosphatase activity abolished during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006657"}


id: GO:0005201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the extracellular matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix structural constituent","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"},{"name":"extracellular matrix glycoprotein","type":"narrow"}],"termid":"GO:0005201"}


id: PBO:0038990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADRM1 26S proteasome ubiquitin receptor","termid":"PBO:0038990"}


id: PBO:0036068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_collapse_during_anaphase_B","termid":"PBO:0036068"}


id: PBO:0044854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 135","termid":"PBO:0044854"}


id: PBO:0026846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_binucleate_septated_cell","termid":"PBO:0026846"}


id: SO:1000103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000103 sequence_variant_decreasing_level_of_translation_product (obsolete SO:1000103)","synonyms":[{"name":"mutationdecreasing level of translation product","type":"related"},{"name":"sequence variant decreasing level of translation product","type":"exact"}],"termid":"SO:1000103"}


id: PBO:0042500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 19","termid":"PBO:0042500"}


id: PBO:0009551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pet117 cytochrome c oxidase assembly protein (predicted)","termid":"PBO:0009551"}


id: GO:0051141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell proliferation.","definition_xrefs":["PMID:12154375","PMID:9133426","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell proliferation","termid":"GO:0046642"},{"relation_name":"is_a","term_name":"negative regulation of NK T cell activation","termid":"GO:0051134"},{"relation_name":"is_a","term_name":"regulation of NK T cell proliferation","termid":"GO:0051140"},{"relation_name":"negatively_regulates","term_name":"NK T cell proliferation","termid":"GO:0001866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of NK T cell proliferation","synonyms":[{"name":"down regulation of NK T cell proliferation","type":"exact"},{"name":"down-regulation of NK T cell proliferation","type":"exact"},{"name":"downregulation of NK T cell proliferation","type":"exact"},{"name":"inhibition of NK T cell proliferation","type":"narrow"},{"name":"negative regulation of NK T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of NK T-cell proliferation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte proliferation","type":"exact"},{"name":"negative regulation of NKT cell proliferation","type":"exact"},{"name":"negative regulation of NT cell proliferation","type":"exact"},{"name":"negative regulation of natural T cell proliferation","type":"exact"},{"name":"negative regulation of natural killer T cell proliferation","type":"exact"}],"termid":"GO:0051141"}


id: GO:0043376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043376"}


id: PBO:0084883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial serine hydroxymethyltransferase; converts serine to glycine plus 5,10 methylenetetrahydrofolate; involved in generating precursors for purine, pyrimidine, amino acid, and lipid biosynthesis; reverse reaction generates serine","termid":"PBO:0084883"}


id: GO:0000182
data:
  {"annotated_genes":["SJAG_04766","SJAG_04527","SJAG_05253","SJAG_00247","SJAG_04855","SJAG_03354","SJAG_03905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71660,73482,97443,98168],"is_not":false,"summary":null,"term":"GO:0000182"},{"annotations":[110076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[97544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[69777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a DNA sequence encoding a ribosomal RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_03354":null,"SJAG_03905":null,"SJAG_04527":null,"SJAG_04766":null,"SJAG_04855":null,"SJAG_05253":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"rDNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal DNA binding","type":"exact"}],"termid":"GO:0000182","terms_by_termid":{"GO:0000182":null,"GO:0001002":null,"GO:0043110":null,"GO:0110035":null}}


id: PBO:0058903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12121","termid":"PBO:0058903"}


id: PBO:0078098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 6A","termid":"PBO:0078098"}


id: GO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 23-membered macrolide lactone FK506.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FK506 binding","synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"related"}],"termid":"GO:0005528"}


id: GO:0034475
data:
  {"annotated_genes":["SJAG_01176","SJAG_02156","SJAG_04824","SJAG_04153","SJAG_04818","SJAG_01521","SJAG_04084","SJAG_04321","SJAG_00854","SJAG_03179","SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71029,71449,72073,72684,72978,73714,74189,75273,75675,76252,83937],"is_not":false,"summary":null,"term":"GO:0034475"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U4 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01521":null,"SJAG_02156":null,"SJAG_03179":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"U4 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"U4 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034475","terms_by_termid":{"GO:0034475":null}}


id: GO:2000634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA processing","termid":"GO:1903798"},{"relation_name":"regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of primary miRNA processing","synonyms":[{"name":"regulation of pri-miRNA processing","type":"exact"},{"name":"regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000634"}


id: PBO:0011962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"other","termid":"PBO:0011962"}


id: PBO:0026847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_tRNA_gene","termid":"PBO:0026847"}


id: PBO:0039657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit alpha 1","termid":"PBO:0039657"}


id: PBO:0058841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8071-1","termid":"PBO:0058841"}


id: PBO:0085102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein putative transcription factor; required for growth of superficial pseudohyphae (which do not invade the agar substrate) but not for invasive pseudohyphal growth; may act together with Phd1p; potential Cdc28p substrate","termid":"PBO:0085102"}


id: PBO:0087182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A34.5; essential for nucleolar assembly and for high polymerase loading rate; nucleolar localization depends on Rpa49p","termid":"PBO:0087182"}


id: GO:0002668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell tolerance induction","termid":"GO:0002665"},{"relation_name":"is_a","term_name":"regulation of T cell anergy","termid":"GO:0002667"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte anergy","termid":"GO:0002912"},{"relation_name":"negatively_regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell anergy","synonyms":[{"name":"down regulation of T cell anergy","type":"exact"},{"name":"down-regulation of T cell anergy","type":"exact"},{"name":"downregulation of T cell anergy","type":"exact"},{"name":"inhibition of T cell anergy","type":"narrow"},{"name":"negative regulation of T lymphocyte anergy","type":"exact"},{"name":"negative regulation of T-cell anergy","type":"exact"},{"name":"negative regulation of T-lymphocyte anergy","type":"exact"}],"termid":"GO:0002668"}


id: PATO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a process by virtue of that process having two or more organisms as participants.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-organismal process quality","termid":"PATO:0002486"}


id: PBO:0069604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 881, pseudogene","termid":"PBO:0069604"}


id: SO:0001239
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tanscription start site that is not the most frequently used for transcription of a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"TSS","termid":"SO:0000315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor_TSS","synonyms":[{"name":"minor TSS","type":"exact"}],"termid":"SO:0001239"}


id: GO:0090074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of protein homodimerization activity","termid":"GO:0043496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein homodimerization activity","termid":"GO:0090074"}


id: PBO:0087822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (65 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087822"}


id: PBO:0077419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 156","termid":"PBO:0077419"}


id: GO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within the mucosal tissue of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","PMID:15609020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal lymphocyte homeostasis","termid":"GO:0002261"}


id: GO:0090377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of an epidermal cell becomes restricted such that it will develop into a seed trichome, causing a change in the orientation of cell division in the ovule epidermis at or just before anthesis.","definition_xrefs":["PMID:17905721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"seed trichome differentiation","termid":"GO:0090376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed trichome initiation","synonyms":[{"name":"seed trichome fate commitment","type":"exact"}],"termid":"GO:0090377"}


id: PBO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family, drebrin ortholog Abp1","termid":"PBO:0002905"}


id: FYPO:0001309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability in stationary phase","synonyms":[{"name":"decreased chronological cell aging","type":"related"},{"name":"increased cell population viability in stationary phase","type":"exact"},{"name":"increased chronological lifespan","type":"related"}],"termid":"FYPO:0001309"}


id: GO:0034730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SMN-Sm protein complex formed by the association of the methylated Sm proteins B/B', D1, D2, D3, E, F, and G with the SMN complex.","definition_xrefs":["PMID:17401408","PMID:12975319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"SmD-containing SMN-Sm protein complex","synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034730"}


id: PBO:0090082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd2","termid":"PBO:0090082"}


id: GO:0006533
data:
  {"annotated_genes":["SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70890],"is_not":false,"summary":null,"term":"GO:0006533"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"aspartate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aspartate breakdown","type":"exact"},{"name":"aspartate catabolism","type":"exact"},{"name":"aspartate degradation","type":"exact"}],"termid":"GO:0006533","terms_by_termid":{"GO:0006533":null}}


id: GO:0015007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A molecular entity that serves as an electron acceptor and electron donor in a chlorophyll electron transport system.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete electron carrier, chlorophyll electron transport system (obsolete GO:0015007)","synonyms":[{"name":"chlorophyll electron carrier","type":"related"},{"name":"electron carrier, chlorophyll electron transport system","type":"exact"}],"termid":"GO:0015007"}


id: PBO:0084995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase localized to the perinuclear ER; produces superoxide from NADPH; overexpression causes MCA1 dependent apoptosis; likely involved in superoxide-mediated regulation of the actin cytoskeleton; member of a conserved superfamily of NADPH oxidases (NOX enzymes); has similarity to iron/copper reductases (FRE1-8), particularly Fre8p","termid":"PBO:0084995"}


id: PBO:0072834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sin3A associated protein 25","termid":"PBO:0072834"}


id: PBO:0045269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 9","termid":"PBO:0045269"}


id: PBO:0070378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 4","termid":"PBO:0070378"}


id: PBO:0062837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 3","termid":"PBO:0062837"}


id: PBO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug117","termid":"PBO:0005432"}


id: GO:0019351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dethiobiotin, a derivative of biotin in which the sulfur atom has been replaced by two hydrogen atoms.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dethiobiotin metabolic process","termid":"GO:0046450"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dethiobiotin biosynthetic process","synonyms":[{"name":"desthiobiotin biosynthesis","type":"exact"},{"name":"desthiobiotin biosynthetic process","type":"exact"},{"name":"dethiobiotin anabolism","type":"exact"},{"name":"dethiobiotin biosynthesis","type":"exact"},{"name":"dethiobiotin formation","type":"exact"},{"name":"dethiobiotin synthesis","type":"exact"}],"termid":"GO:0019351"}


id: PBO:0058787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7156","termid":"PBO:0058787"}


id: PBO:0004018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase (predicted)","termid":"PBO:0004018"}


id: PBO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 99","termid":"PBO:0071097"}


id: GO:0021503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of the neural fold elevations that results in the movement of the tips of the elevations towards each other in order to fuse.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid","PMID:15806586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"neural fold formation","termid":"GO:0001842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold bending","termid":"GO:0021503"}


id: GO:2000749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of rDNA heterochromatin formation.","definition_xrefs":["PMID:10899127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of rDNA heterochromatin formation","termid":"GO:0061187"},{"relation_name":"positively_regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"positive regulation of rDNA heterochromatin formation","synonyms":[{"name":"positive regulation of chromatin silencing at rDNA","type":"broad"},{"name":"positive regulation of chromatin silencing at ribosomal DNA","type":"broad"},{"name":"positive regulation of heterochromatic silencing at rDNA","type":"broad"},{"name":"positive regulation of rDNA chromatin silencing","type":"broad"},{"name":"positive regulation of rDNA heterochromatin assembly","type":"exact"},{"name":"positive regulation of ribosomal DNA heterochromatin assembly","type":"exact"}],"termid":"GO:2000749"}


id: FYPO:0005641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochores become separated during the first meiotic nuclear division, and in which homologous chromosomes do not move towards the spindle poles at the same time during anaphase, but are eventually separated normally.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:21920317"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging chromosomes during meiosis I","termid":"FYPO:0004393"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and unequal sister chromatid segregation in meiosis II","termid":"FYPO:0005633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with precocious centromeric dissociation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome segregation","type":"related"},{"name":"abnormal chromosome segregation during meiosis I with split kinetochores, lagging chromosomes, and normal chromosome separation","type":"related"}],"termid":"FYPO:0005641"}


id: PBO:0079720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 7","termid":"PBO:0079720"}


id: GO:0047904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + keto-D-fructose = 5-dehydro-D-fructose + a ubiquinol.","definition_xrefs":["RHEA:22304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"fructose 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:FRUCTOSE-5-DEHYDROGENASE-RXN","EC:1.1.5.14","KEGG_REACTION:R00873"],"synonyms":[{"name":"D-fructose dehydrogenase activity","type":"related"}],"termid":"GO:0047904"}


id: PBO:0046341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 6","termid":"PBO:0046341"}


id: GO:0046918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to a nitrogen (N) atom in an N-terminal glycine residue to form N-palmitoyl-glycine.","definition_xrefs":["RESID:AA0339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein palmitoylation","termid":"GO:0006500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine N-palmitoylation","termid":"GO:0046918"}


id: PBO:0085347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; required for efficient acyl chain remodeling of newly synthesized phosphatidylethanolamine-derived phosphatidylcholine; required for deacylation of phosphatidylcholine and phosphatidylethanolamine but not phosphatidylinositol; PLB1 has a paralog, PLB3, that arose from the whole genome duplication","termid":"PBO:0085347"}


id: GO:0097437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in an organism remaining in dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of dormancy","termid":"GO:0097437"}


id: GO:0062241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA double strand breaks and the nuclear inner membrane, in order to facilitate DNA repair.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"double strand break-nuclear membrane anchor activity","synonyms":[{"name":"DNA repair factory","type":"related"}],"termid":"GO:0062241"}


id: GO:0045862
data:
  {"annotated_genes":["SJAG_00642","SJAG_01131","SJAG_01489","SJAG_02723","SJAG_03048","SJAG_01544","SJAG_00766","SJAG_04477","SJAG_00071","SJAG_01210","SJAG_00712","SJAG_03699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[68241,65380,67102,61324,68790,67307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[112071,104056,101856,97646,106820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteolysis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of proteolysis","type":"narrow"},{"name":"positive regulation of peptidolysis","type":"exact"},{"name":"stimulation of proteolysis","type":"narrow"},{"name":"up regulation of proteolysis","type":"exact"},{"name":"up-regulation of proteolysis","type":"exact"},{"name":"upregulation of proteolysis","type":"exact"}],"termid":"GO:0045862","terms_by_termid":{"GO:0032436":null,"GO:1901800":null,"GO:1905786":null}}


id: PBO:0062220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AP member 1 pseudogene","termid":"PBO:0062220"}


id: PBO:0062929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase 2","termid":"PBO:0062929"}


id: GO:0010912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the activity of an isomerase. An isomerase catalyzes the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isomerase activity","termid":"GO:0010911"},{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of isomerase activity","termid":"GO:0010912"}


id: PBO:0067348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 445, pseudogene","termid":"PBO:0067348"}


id: GO:0047142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized glutathione + [xanthine dehydrogenase] = reduced glutathione + xanthine-oxidase.","definition_xrefs":["MetaCyc:1.8.4.7-RXN","EC:1.8.4.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"enzyme-thiol transhydrogenase (glutathione-disulfide) activity","synonyms":[{"name":"[xanthine-dehydrogenase]:oxidized-glutathione S-oxidoreductase activity","type":"related"},{"name":"enzyme-thiol transhydrogenase (glutathione-disulphide) activity","type":"exact"},{"name":"enzyme-thiol transhydrogenase (oxidized-glutathione) activity","type":"exact"},{"name":"glutathione-dependent thiol:disulfide oxidoreductase activity","type":"related"},{"name":"thiol:disulfide oxidoreductase activity","type":"related"},{"name":"thiol:disulphide oxidoreductase activity","type":"related"},{"name":"xanthine-dehydrogenase:glutathione-disulfide S-oxidoreductase activity","type":"related"},{"name":"xanthine-dehydrogenase:oxidized-glutathione S-oxidoreductase activity","type":"related"}],"termid":"GO:0047142"}


id: PBO:0017876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase Rhp1602 (predicted)","termid":"PBO:0017876"}


id: PBO:0077539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 252","termid":"PBO:0077539"}


id: PBO:0086550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL028W is not an essential gene","termid":"PBO:0086550"}


id: GO:0075170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein kinase-mediated signal transduction in response to host (obsolete GO:0075170)","synonyms":[{"name":"negative regulation of symbiont protein kinase-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075170"}


id: PBO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_vegetative_growth","termid":"PBO:0031441"}


id: GO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001197)","synonyms":[{"name":"activation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"stimulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"up regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"up-regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"upregulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"}],"termid":"GO:0001197"}


id: PBO:0035698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytokinesis_checkpoint","termid":"PBO:0035698"}


id: GO:0062207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a pattern recognition receptor signaling pathway.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"}


id: GO:0051585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of dopamine into a presynaptic neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine uptake involved in synaptic transmission","termid":"GO:0051584"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051945"},{"relation_name":"negatively_regulates","term_name":"dopamine uptake involved in synaptic transmission","termid":"GO:0051583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"down regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"down-regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"downregulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"negative regulation of dopamine import involved in synaptic transmission","type":"exact"}],"termid":"GO:0051585"}


id: PBO:0091774
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2219928_2219929insT","termid":"PBO:0091774"}


id: PBO:0046857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated factor 1","termid":"PBO:0046857"}


id: GO:0046612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the lysosomal membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar proton-transporting V-type ATPase, V1 domain","termid":"GO:0000221"},{"relation_name":"part_of","term_name":"lysosomal proton-transporting V-type ATPase complex","termid":"GO:0046611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lysosomal proton-transporting V-type ATPase, V1 domain","synonyms":[{"name":"lysosomal hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0046612"}


id: GO:0080189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a plant structure from the time of its initiation by an apical meristem until its expansion is completed.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary growth","termid":"GO:0080189"}


id: PR:O74447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.02c gene.","definition_xrefs":["UniProtKB:O74447","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.02c","synonyms":[{"name":"Spom972h-SPCC16C4.02c","type":"exact"}],"termid":"PR:O74447"}


id: PBO:0067460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 585, pseudogene","termid":"PBO:0067460"}


id: PBO:0087470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ATP-dependent Isw2p-Itc1p chromatin remodeling complex; required for repression of a-specific genes, repression of early meiotic genes during mitotic growth, and repression of INO1; similar to mammalian Acf1p, the regulatory subunit of the mammalian ATP-utilizing chromatin assembly and modifying factor (ACF) complex; ITC1 has a paralog, YPL216W, that arose from the whole genome duplication","termid":"PBO:0087470"}


id: PBO:0084795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in assembly of succinate dehydrogenase; has a role in maturation of the Sdh2p subunit; member of the LYR protein family; mutations in human ortholog SDHAF1 are associated with infantile leukoencephalopathy","termid":"PBO:0084795"}


id: PBO:0076790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectorin beta","termid":"PBO:0076790"}


id: PBO:0005863
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this may be a none coding RNA","termid":"PBO:0005863"}


id: GO:0030258
data:
  {"annotated_genes":["SJAG_02788","SJAG_04792","SJAG_00413","SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75660],"is_not":false,"summary":null,"term":"GO:0030258"},{"annotations":[72641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[87634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019395"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more fatty acids in a lipid, resulting in a change in the properties of the lipid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00706":null,"SJAG_02788":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030258","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0019395":null,"GO:0030258":null}}


id: GO:0140613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mn2+(in) = ADP + H+ + Mn2+(out) + phosphate.","definition_xrefs":["PMID:15831496","RHEA:66820","PMID:15590060","PMID:21187401","PMID:11134055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"P-type manganese transporter activity","termid":"GO:0140613"}


id: PBO:0041068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 1","termid":"PBO:0041068"}


id: PR:O94567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.10c","secondary_identifiers":["UniProtKB:O94567"],"synonyms":[{"name":"AsnRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NARS","type":"exact"},{"name":"asparaginyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94567"}


id: PBO:0027958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027958"}


id: GO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"chaperone-mediated protein complex assembly","termid":"GO:0051131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of chaperone-mediated protein complex assembly","termid":"GO:0090034"}


id: PBO:0055268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2695","termid":"PBO:0055268"}


id: PBO:0061170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (CTG) 1-1","termid":"PBO:0061170"}


id: PBO:0041565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 85","termid":"PBO:0041565"}


id: PBO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein","termid":"PBO:0000068"}


id: PBO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_leucine_nitrogen_source","termid":"PBO:0030088"}


id: PBO:0071865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 3","termid":"PBO:0071865"}


id: PBO:0068208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 515","termid":"PBO:0068208"}


id: PBO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein","termid":"PBO:0000453"}


id: GO:0031315
data:
  {"annotated_genes":["SJAG_00655"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102400],"is_not":false,"summary":null,"term":"GO:0031315"}]},"cv_name":"cellular_component","definition":"The component of a mitochondrial outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"mitochondrial outer membrane","termid":"GO:0005741"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00655":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"extrinsic component of mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to mitochondrial outer membrane","type":"narrow"}],"termid":"GO:0031315","terms_by_termid":{"GO:0031315":null}}


id: GO:1990566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inward rectifier potassium channel complex expressed in cardiac muscle, specifically the sinoatrial node and atria, where it controls the heart rate, via regulation by G protein-coupled receptor signaling. In mammals it is composed of GIRK1 (or Kir3.1) and GIRK4 (or Kir3.4) subunits.","definition_xrefs":["PMID:9765280","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"I(KACh) inward rectifier potassium channel complex","synonyms":[{"name":"GIRK1-GIRK4 G protein-coupled atrial inward rectifier potassium channel complex","type":"related"},{"name":"Kir3.1-Kir3.4 G protein-coupled atrial inward rectifier potassium channel complex","type":"related"},{"name":"muscarinic potassium channel complex","type":"related"}],"termid":"GO:1990566"}


id: PBO:0047293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2","termid":"PBO:0047293"}


id: PBO:0012259
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staurosporine supersensitive","termid":"PBO:0012259"}


id: GO:1902014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(glycerol phosphate) teichoic acid.","definition_xrefs":["UniPathway:UPA00827","GOC:TermGenie","PMID:11882717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"poly(glycerol phosphate) teichoic acid metabolic process","termid":"GO:1902013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044281","GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"poly(glycerol phosphate) teichoic acid biosynthetic process","synonyms":[{"name":"poly(glycerol phosphate) teichoic acid anabolism","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid biosynthesis","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid formation","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid synthesis","type":"exact"}],"termid":"GO:1902014"}


id: GO:0006948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of syncytia-forming cell-cell fusion, caused by a virus.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction by virus of host cell-cell fusion","synonyms":[{"name":"induction by virus of cell-cell fusion in host","type":"exact"},{"name":"viral-induced cell-cell fusion","type":"exact"},{"name":"viral-induced host cell-cell fusion","type":"exact"},{"name":"viral-induced membrane fusion","type":"narrow"}],"termid":"GO:0006948"}


id: GO:0051715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The killing by an organism of a cell in another organism by means of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:ai","PMID:22484288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytolysis","termid":"GO:0019835"},{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis in another organism","secondary_identifiers":["GO:0001901","GO:0044649"],"synonyms":[{"name":"cytolysis in other organism","type":"exact"},{"name":"cytolysis of cells of another organism","type":"exact"},{"name":"envenomation resulting in cytolysis in another organism","type":"narrow"},{"name":"envenomation resulting in cytolysis in other organism","type":"narrow"}],"termid":"GO:0051715"}


id: PBO:0034390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_in_by","termid":"PBO:0034390"}


id: PBO:0039935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 39","termid":"PBO:0039935"}


id: MOD:01088
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2,4,6-trimethyloxybenzyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4,6-trimethyloxybenzyl modified residue","synonyms":[{"name":"Tmob","type":"exact"}],"termid":"MOD:01088"}


id: PBO:0109460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein required for translocation of Man5GlcNac2-PP-Dol from the cytoplasmic side to the lumenal side of the ER Rft1","termid":"PBO:0109460"}


id: PBO:0073540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 2","termid":"PBO:0073540"}


id: GO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine = 2,5-diaminohexanoate.","definition_xrefs":["RHEA:18241","EC:5.4.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"D-lysine 5,6-aminomutase activity","secondary_identifiers":["KEGG_REACTION:R02852","MetaCyc:BETA-LYSINE-56-AMINOMUTASE-RXN"],"synonyms":[{"name":"D-2,6-diaminohexanoate 5,6-aminomutase activity","type":"related"},{"name":"D-alpha-lysine mutase activity","type":"related"},{"name":"adenosylcobalamin-dependent D-lysine 5,6-aminomutase activity","type":"related"}],"termid":"GO:0047826"}


id: PBO:0073880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 7","termid":"PBO:0073880"}


id: GO:0047625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) = S-methyl-5'-thioadenosine + homoserine lactone.","definition_xrefs":["EC:2.5.1.4","RHEA:21932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"adenosylmethionine cyclotransferase activity","secondary_identifiers":["KEGG_REACTION:R00180","MetaCyc:ADENOSYLMETHIONINE-CYCLOTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine alkyltransferase (cyclizing)","type":"related"},{"name":"adenosyl methionine cyclotransferase activity","type":"exact"},{"name":"adenosylmethioninase activity","type":"related"}],"termid":"GO:0047625"}


id: PBO:0087268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; phosphorylates Pan1p-Sla1p-End3p protein complex subunits, Pan1p and Sla1p; involved in regulation of the cortical actin cytoskeleton and endocytosis; functional overlap with PRK1","termid":"PBO:0087268"}


id: PBO:0034317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_II_bouton","termid":"PBO:0034317"}


id: GO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A diffusely banded region of heterochromatin located between euchromatin and alpha-heterochromatin in the polytene chromosome chromocenter; normally replicated during polytenization.","definition_xrefs":["PMID:8878678","PMID:11404334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"beta-heterochromatin","termid":"GO:0005722"}


id: PBO:0048178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase regulator","termid":"PBO:0048178"}


id: PBO:0053118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 8","termid":"PBO:0053118"}


id: SO:0001485
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Y' element is a repeat region (SO:0000657) located adjacent to telomeric repeats or X element combinatorial repeats, either as a single copy or tandem repeat of two to four copies.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_prime_element","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:Y_prime_element","type":"exact"},{"name":"Y prime element","type":"exact"},{"name":"Y' element","type":"exact"}],"termid":"SO:0001485"}


id: SO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 18S_rRNA, which functions as the small subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA_gene","termid":"SO:0002362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_18S_gene","synonyms":[{"name":"18S rRNA gene","type":"exact"},{"name":"18S_rRNA_gene","type":"exact"}],"termid":"SO:0002236"}


id: PATO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"movement behavioral quality","synonyms":[{"name":"movement behavioural quality","type":"exact"}],"termid":"PATO:0002076"}


id: GO:0030686
data:
  {"annotated_genes":["SJAG_03252","SJAG_02759","SJAG_01169","SJAG_00142","SJAG_03931","SJAG_03846","SJAG_00572","SJAG_05186","SJAG_01275","SJAG_04346","SJAG_04339","SJAG_00538","SJAG_01272","SJAG_03654","SJAG_00879","SJAG_00245","SJAG_01799","SJAG_01115","SJAG_04069","SJAG_01420","SJAG_00838","SJAG_00965","SJAG_04979","SJAG_01877","SJAG_01752","SJAG_04224","SJAG_04033","SJAG_02372","SJAG_00882","SJAG_02300","SJAG_02250","SJAG_03156","SJAG_05187","SJAG_03617","SJAG_04847","SJAG_01494","SJAG_02681","SJAG_02830"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70204,70658,71518,72301,72947,74823,75198,75423,76673,88036,95873,96850,102221,108157,110733,111569,111754],"is_not":false,"summary":null,"term":"GO:0030686"},{"annotations":[77031,78540,74972],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034457"},{"annotations":[93220,78477,72384],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[72228,77239],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"},{"annotations":[75061,73121,74097],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070545"},{"annotations":[70981,78135,75600,71432,72894],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034388"},{"annotations":[75017,77160,73964,89152,76898],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"A large ribonucleoprotein complex considered to be the earliest preribosomal complex. In S. cerevisiae, it has a size of 90S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.","definition_xrefs":["PMID:12150911","PMID:15120992","GOC:vw","PMID:12957375","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00245":null,"SJAG_00538":null,"SJAG_00572":null,"SJAG_00838":null,"SJAG_00879":null,"SJAG_00882":null,"SJAG_00965":null,"SJAG_01115":null,"SJAG_01169":null,"SJAG_01272":null,"SJAG_01275":null,"SJAG_01420":null,"SJAG_01494":null,"SJAG_01752":null,"SJAG_01799":null,"SJAG_01877":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02372":null,"SJAG_02681":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03156":null,"SJAG_03252":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03846":null,"SJAG_03931":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04346":null,"SJAG_04847":null,"SJAG_04979":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0030684"}],"interesting_parent_ids":["GO:0032991","GO:0030684","GO:0005575"],"is_obsolete":false,"name":"90S preribosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030686","terms_by_termid":{"GO:0030686":null,"GO:0030690":null,"GO:0030692":null,"GO:0034388":null,"GO:0034456":null,"GO:0034457":null,"GO:0070545":null}}


id: FYPO:0001430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested before cells have replicated genomic DNA, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased number of cells with 1C DNA content","termid":"FYPO:0001974"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with unreplicated DNA","synonyms":[{"name":"abnormal cell cycle arrest with unreplicated DNA during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with 1C DNA content","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with unreplicated DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0001430"}


id: PBO:0082741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; essential gene required for cell cycle progression and maintenance of proper ploidy; phosphorylated in the G1 phase of the cell cycle; Snf5p paralog; hSNF5 tumor suppressor ortholog","termid":"PBO:0082741"}


id: PR:P21535
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05079","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.07","secondary_identifiers":["UniProtKB:P21535"],"synonyms":[{"name":"F-ATPase protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MT-ATP6","type":"exact"}],"termid":"PR:P21535"}


id: GO:0090268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of a mitotic cell cycle spindle assembly checkpoint.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0044772","GO:0000070","GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"activation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090268"}


id: FYPO:0008140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal nuclear envelope morpbology in the vegetative growth phase of the life cycle in which the nuclear envelope lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002403"],"is_obsolete":false,"name":"dilated nuclear envelope lumen","termid":"FYPO:0008140"}


id: GO:0043136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 3-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-8955794","MetaCyc:GLYCEROL-1-PHOSPHATASE-RXN"],"termid":"GO:0043136"}


id: SO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polymorphic pseudogene in the reference genome, containing a retained intron, known to be intact in the genomes of other individuals of the same species. The annotation process has confirmed that the pseudogenisation event is not a genomic sequencing error.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymorphic_pseudogene","termid":"SO:0001841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_pseudogene_with_retained_intron","synonyms":[{"name":"polymorphic pseudogene with retained intron","type":"exact"}],"termid":"SO:0002110"}


id: PBO:0089050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase","termid":"PBO:0089050"}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: PBO:0030693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_normal_morphology","termid":"PBO:0030693"}


id: PBO:0051941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B pseudogene 1","termid":"PBO:0051941"}


id: PBO:0045927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member B","termid":"PBO:0045927"}


id: GO:0007164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in a tissue, such that they all orient to similar coordinates.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of tissue polarity","termid":"GO:0007164"}


id: PR:O59823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05013","PANTHER:PTHR11671:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.03","secondary_identifiers":["UniProtKB:O59823"],"synonyms":[{"name":"Spom972h-ATP6V1D","type":"exact"},{"name":"V-ATPase subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59823"}


id: GO:0098762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the meiotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic cell cycle phase","termid":"GO:0098762"}


id: PBO:0076726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 family AKT coactivator B","termid":"PBO:0076726"}


id: PBO:0063407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 3","termid":"PBO:0063407"}


id: PBO:0055820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPP antisense RNA 2","termid":"PBO:0055820"}


id: GO:0035584
data:
  {"annotated_genes":["SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86678],"is_not":false,"summary":null,"term":"GO:0035584"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which a cell uses calcium ions released from an intracellular store to convert a signal into a response.","definition_xrefs":["GOC:BHF","GOC:bf","PMID:20192754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcium-mediated signaling using intracellular calcium source","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium signaling using intracellular calcium source","type":"exact"},{"name":"calcium signalling using intracellular calcium source","type":"exact"},{"name":"calcium-mediated signalling using intracellular calcium source","type":"exact"}],"termid":"GO:0035584","terms_by_termid":{"GO:0035584":null}}


id: GO:0009410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to xenobiotic stimulus","secondary_identifiers":["GO:0042493","GO:0017104","GO:0017035"],"synonyms":[{"name":"drug resistance","type":"related"},{"name":"drug susceptibility/resistance","type":"related"},{"name":"response to drug","type":"related"}],"termid":"GO:0009410"}


id: FYPO:0002590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any tRNA processing intermediates with 3' extensions measured in the mitochondria is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level","termid":"FYPO:0005999"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions","synonyms":[{"name":"increased accumulation of mitochondrial tRNA processing intermediates with 3' extensions","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during vegetative growth","type":"exact"}],"termid":"FYPO:0002590"}


id: PBO:0039830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-fifty homeobox pseudogene 1","termid":"PBO:0039830"}


id: GO:0102608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetracenomycin B3 + S-adenosyl-L-methionine = tetracenomycin E + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"tetracenomycin B3 8-O-methyl transferase activity","secondary_identifiers":["MetaCyc:RXN-15435"],"termid":"GO:0102608"}


id: PBO:0070894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 2","termid":"PBO:0070894"}


id: GO:0039690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is positive stranded, single stranded RNA ((+)ssRNA). Replication of the positive strand leads to dsRNA formation, which in turn is transcribed into positive single stranded RNA.","definition_xrefs":["GOC:bf","GOC:jl","VZ:1116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive stranded viral RNA replication","synonyms":[{"name":"ss(+) viral RNA replication","type":"related"}],"termid":"GO:0039690"}


id: PR:O14108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eta2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein eta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.10","synonyms":[{"name":"Spom972h-eta2","type":"exact"}],"termid":"PR:O14108"}


id: PBO:0000492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein Spo15","termid":"PBO:0000492"}


id: PBO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain protein (predicted)","termid":"PBO:0001343"}


id: PR:O74520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp663 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C663.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.14c","synonyms":[{"name":"Spom972h-trp663","type":"exact"}],"termid":"PR:O74520"}


id: PBO:0078525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16","termid":"PBO:0078525"}


id: GO:0039677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus that involves disruption of the nuclear membrane envelope by the virus.","definition_xrefs":["VZ:2176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus via nuclear envelope disassembly","synonyms":[{"name":"exit of virus from host cell nucleus via nuclear envelope breakdown","type":"exact"}],"termid":"GO:0039677"}


id: PBO:0064142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKN2 antisense RNA 1","termid":"PBO:0064142"}


id: PBO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YKR075C has a paralog, YOR062C, that arose from the whole genome duplication","termid":"PBO:0086003"}


id: PBO:0073682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 4","termid":"PBO:0073682"}


id: PBO:0057420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548v","termid":"PBO:0057420"}


id: GO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactarate, the anion of galactaric acid.","definition_xrefs":["GOC:pr","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid biosynthetic process","termid":"GO:0019578"},{"relation_name":"is_a","term_name":"galactarate metabolic process","termid":"GO:0019580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galactarate biosynthetic process","secondary_identifiers":["GO:0042872"],"synonyms":[{"name":"D-galactarate anabolism","type":"related"},{"name":"D-galactarate biosynthesis","type":"related"},{"name":"D-galactarate biosynthetic process","type":"related"},{"name":"D-galactarate formation","type":"related"},{"name":"D-galactarate synthesis","type":"related"},{"name":"galactarate anabolism","type":"exact"},{"name":"galactarate biosynthesis","type":"exact"},{"name":"galactarate formation","type":"exact"},{"name":"galactarate synthesis","type":"exact"}],"termid":"GO:0046357"}


id: GO:1905937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of germ cell proliferation.","definition_xrefs":["GO_REF:0000058","PMID:15342467","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germ cell proliferation","synonyms":[{"name":"down regulation of germ cell proliferation","type":"exact"},{"name":"down-regulation of germ cell proliferation","type":"exact"},{"name":"downregulation of germ cell proliferation","type":"exact"},{"name":"inhibition of germ cell proliferation","type":"narrow"}],"termid":"GO:1905937"}


id: FYPO:0006806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased galactosyltransferase activity","synonyms":[{"name":"reduced galactosyltransferase activity","type":"exact"}],"termid":"FYPO:0006806"}


id: GO:0043771
data:
  {"annotated_genes":["SJAG_03708","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88388,109973],"is_not":false,"summary":null,"term":"GO:0043771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + cytidine = ADP + CMP.","definition_xrefs":["RHEA:24674","PMID:211379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cytidine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.213"],"synonyms":[{"name":"uridine-cytidine kinase activity","type":"narrow"}],"termid":"GO:0043771","terms_by_termid":{"GO:0043771":null}}


id: PATO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000525 soil composition sensitivity value (obsolete PATO:0000525)","termid":"PATO:0000525"}


id: PBO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0030911"}


id: PBO:0084763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mRNA maturase; forms a complex with Mrs1p to mediate splicing of the bI3 intron of the COB gene; encoded by both exon and intron sequences of partially processed COB mRNA","termid":"PBO:0084763"}


id: PBO:0068826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 64, pseudogene","termid":"PBO:0068826"}


id: PBO:0068139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 446","termid":"PBO:0068139"}


id: GO:1904127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["GO_REF:0000058","GOC:dph","PMID:24892953","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"}


id: GO:0032329
data:
  {"annotated_genes":["SJAG_03256","SJAG_04588"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[65295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[86109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine, 2-amino-3-hydroxypropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"serine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0090478"],"synonyms":[{"name":"serine import","type":"narrow"}],"termid":"GO:0032329","terms_by_termid":{"GO:0015825":null,"GO:0090516":null,"GO:0140300":null}}


id: PBO:0088431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Rib1","termid":"PBO:0088431"}


id: PBO:0083606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential CDC42/YLR229C gene which encodes a small Rho-like GTPase essential for establishment and maintenance of cell polarity","termid":"PBO:0083606"}


id: PBO:0087771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma; Small Subunit processome is also known as SSU processome","termid":"PBO:0087771"}


id: PBO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0005332"}


id: PBO:0028861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_micafungin","termid":"PBO:0028861"}


id: GO:0043752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RTP + adenosylcobinamide = adenosylcobinamide phosphate + RDP (where RTP is either ATP or GTP).","definition_xrefs":["EC:2.7.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"adenosylcobinamide kinase activity","secondary_identifiers":["MetaCyc:2.7.1.156-RXN"],"synonyms":[{"name":"AdoCbi kinase/AdoCbi-phosphate guanylyltransferase","type":"broad"},{"name":"CobU","type":"related"},{"name":"RTP:adenosylcobinamide phosphotransferase activity","type":"exact"},{"name":"adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase","type":"broad"}],"termid":"GO:0043752"}


id: PBO:0083323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SBP1/YHL034C","termid":"PBO:0083323"}


id: FYPO:0001605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of substance in cytosol","synonyms":[{"name":"decreased cytosolic level of substance","type":"exact"},{"name":"decreased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in cytosol during vegetative growth","type":"exact"},{"name":"reduced level of substance in cytosol","type":"exact"}],"termid":"FYPO:0001605"}


id: PBO:0027626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcriptional_response_to_pheromone","termid":"PBO:0027626"}


id: PBO:0030292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septum_thickness","termid":"PBO:0030292"}


id: PBO:0054257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1641","termid":"PBO:0054257"}


id: SO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carbamoylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carbamoylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:076"],"synonyms":[{"name":"5-carbamoylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five carbamoylmethyl two prime O methyluridine","type":"exact"},{"name":"ncm5Um","type":"exact"}],"termid":"SO:0001368"}


id: PBO:0084145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity inorganic phosphate (Pi) transporter; also low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p; cells overexpressing Pho84p accumulate heavy metals but do not develop symptoms of metal toxicity","termid":"PBO:0084145"}


id: PBO:0070381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 2","termid":"PBO:0070381"}


id: FYPO:0000070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amphotericin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to amphotericin B","synonyms":[{"name":"resistance to amphotericin B during mitotic cell cycle","type":"related"},{"name":"resistance to amphotericin B during vegetative growth","type":"exact"},{"name":"resistant to amphotericin","type":"exact"}],"termid":"FYPO:0000070"}


id: PBO:0041937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 5","termid":"PBO:0041937"}


id: PR:O94528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A multidrug transporter MdfA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine resistance protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.04","secondary_identifiers":["UniProtKB:O94528"],"synonyms":[{"name":"Spom972h-cmr","type":"exact"}],"termid":"PR:O94528"}


id: PBO:0005025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase Atp23 (predicted)","termid":"PBO:0005025"}


id: PBO:0053050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 1","termid":"PBO:0053050"}


id: GO:0006185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGDP, deoxyguanosine diphosphate, (2'-deoxyguanosine 5'-diphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009183"},{"relation_name":"is_a","term_name":"dGDP metabolic process","termid":"GO:0046066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGDP biosynthetic process","synonyms":[{"name":"dGDP anabolism","type":"exact"},{"name":"dGDP biosynthesis","type":"exact"},{"name":"dGDP formation","type":"exact"},{"name":"dGDP synthesis","type":"exact"}],"termid":"GO:0006185"}


id: GO:0032421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bundle of cross-linked stereocilia, arranged around a kinocilium on the apical surface of a sensory hair cell (e.g. a neuromast, auditory or vestibular hair cell). Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes.","definition_xrefs":["GOC:ecd","PMID:7840137","PMID:15661519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cluster of actin-based cell projections","termid":"GO:0098862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium bundle","synonyms":[{"name":"stereocilia bundle","type":"exact"}],"termid":"GO:0032421"}


id: PBO:0058075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4293","termid":"PBO:0058075"}


id: PBO:0049003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1 like","termid":"PBO:0049003"}


id: PBO:0056517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 4","termid":"PBO:0056517"}


id: PR:O14460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04354","PANTHER:PTHR23115:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.01c","secondary_identifiers":["UniProtKB:O14460"],"synonyms":[{"name":"EF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF2","type":"exact"}],"termid":"PR:O14460"}


id: PR:O13650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.07c","synonyms":[{"name":"Spom972h-sfc9","type":"exact"},{"name":"TFIIIC subunit sfc9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13650"}


id: GO:0140977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of acetone. These may include chemical modification, for example to methylglyoxal.","definition_xrefs":["PMID:26958851","PMID:22314896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of acetone","termid":"GO:0140977"}


id: PBO:0054972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2386","termid":"PBO:0054972"}


id: PBO:0040774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 7 pseudogene 1","termid":"PBO:0040774"}


id: PBO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 2","termid":"PBO:0042812"}


id: PBO:0056949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 16-1","termid":"PBO:0056949"}


id: GO:0003960
data:
  {"annotated_genes":["SJAG_03476"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73567],"is_not":false,"summary":null,"term":"GO:0003960"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone.","definition_xrefs":["EC:1.6.5.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH:quinone reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:QOR-RXN","Reactome:R-HSA-6799722","RHEA:14269"],"synonyms":[{"name":"NADPH:quinone oxidoreductase activity","type":"related"},{"name":"quinone oxidoreductase activity","type":"broad"},{"name":"zeta-crystallin activity","type":"narrow"}],"termid":"GO:0003960","terms_by_termid":{"GO:0003960":null}}


id: PBO:0050073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMBOX1 intronic transcript 1","termid":"PBO:0050073"}


id: GO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol biosynthetic process","synonyms":[{"name":"orcinol anabolism","type":"exact"},{"name":"orcinol biosynthesis","type":"exact"},{"name":"orcinol formation","type":"exact"},{"name":"orcinol synthesis","type":"exact"}],"termid":"GO:0046197"}


id: FYPO:0004970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated when the cell is subject to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable elongated vegetative cell during phosphate starvation","synonyms":[{"name":"elongated viable vegetative cell during phosphate starvation","type":"exact"},{"name":"viable elongated cell during phosphate starvation during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell during cellular response to phosphate starvation","type":"exact"},{"name":"viable elongated vegetative cell during phosphate starvation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004970"}


id: GO:0034274
data:
  {"annotated_genes":["SJAG_06309","SJAG_00059"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71726,72484],"is_not":false,"summary":null,"term":"GO:0034274"}]},"cv_name":"cellular_component","definition":"A protein complex required for the expansion of the autophagosomal membrane. In budding yeast, this complex consists of Atg12p, Atg5p and Atg16p.","definition_xrefs":["GOC:rb","PMID:17986448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Atg12-Atg5-Atg16 complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0034274","terms_by_termid":{"GO:0034274":null}}


id: PR:O13641
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8D2.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase SPBC8D2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.16c","synonyms":[{"name":"Spom972h-SPBC8D2.16c","type":"exact"}],"termid":"PR:O13641"}


id: PBO:0071575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 4","termid":"PBO:0071575"}


id: PBO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 38","termid":"PBO:0044351"}


id: PBO:0031813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_autophagy","termid":"PBO:0031813"}


id: PBO:0074635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 29","termid":"PBO:0074635"}


id: PBO:0030497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_iron-sulfur_cluster_binding","termid":"PBO:0030497"}


id: GO:0030698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from 5,10-methylenetetrahydrofolate to the C5 atom of the uridine residue at position 54 in a tRNA molecule. This occurs in most Gram-positive bacteria and some Gram-negative bacteria.","definition_xrefs":["GOC:hjd","ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity (obsolete GO:0030698)","synonyms":[{"name":"RUMT","type":"broad"}],"termid":"GO:0030698"}


id: SO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles. Nest should not have Proline as any residue. Nests frequently occur as parts of other motifs such as Schellman loops.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_motif","secondary_identifiers":["BS:00223"],"synonyms":[{"name":"nest","type":"related"},{"name":"nest_motif","type":"exact"},{"name":"polypeptide nest motif","type":"related"}],"termid":"SO:0001120"}


id: GO:0047428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + 4-chlorophenylacetonitrile = 4-chlorophenylacetate + NH3.","definition_xrefs":["EC:3.5.5.5","MetaCyc:3.5.5.5-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arylacetonitrilase activity","secondary_identifiers":["RHEA:20657"],"synonyms":[{"name":"arylacetonitrile aminohydrolase activity","type":"related"}],"termid":"GO:0047428"}


id: PBO:0043142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 10","termid":"PBO:0043142"}


id: GO:0019081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which viral mRNA is translated into viral protein, using the host cellular machinery.","definition_xrefs":["GOC:bf","ISBN:0781702534","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translation","synonyms":[{"name":"viral protein anabolism","type":"exact"},{"name":"viral protein biosynthesis","type":"exact"},{"name":"viral protein biosynthetic process","type":"exact"},{"name":"viral protein formation","type":"exact"},{"name":"viral protein synthesis","type":"exact"}],"termid":"GO:0019081"}


id: PBO:0052699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17","termid":"PBO:0052699"}


id: PBO:0031687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peroxisomal_transport","termid":"PBO:0031687"}


id: PBO:0059973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 18","termid":"PBO:0059973"}


id: PBO:0060301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 11","termid":"PBO:0060301"}


id: PBO:0058989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT11 transcription factor 7 cofactor","termid":"PBO:0058989"}


id: PBO:0061130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor","termid":"PBO:0061130"}


id: GO:1990860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cyclin dependent kinase (CDK) complex that contains a kinase subunit and a regulatory cyclin subunit. An example of this complex in budding yeast S. cerevisiae consists of the Pho85 kinase and the Pho80 cyclin.","definition_xrefs":["PMID:8108735","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Pho85-Pho80 CDK-cyclin complex","termid":"GO:1990860"}


id: GO:0035755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cardiolipin (1,3-bis(3-phosphatidyl)glycerol), releasing phosphatidic acid (PA).","definition_xrefs":["PMID:17028579","PMID:21397848","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"cardiolipin hydrolase activity","secondary_identifiers":["Reactome:R-HSA-8954398"],"termid":"GO:0035755"}


id: PBO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.1","termid":"PBO:0000941"}


id: PR:O74856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- caf1 gene.","definition_xrefs":["UniProtKB:O74856","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) ribonuclease pop2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.06c","synonyms":[{"name":"CCR4-associated factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-caf1","type":"exact"}],"termid":"PR:O74856"}


id: PATO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An anterior-posterior diameter quality which is relatively large.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased diameter","termid":"PATO:0001714"},{"relation_name":"is_a","term_name":"anterior-posterior diameter","termid":"PATO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased anterior-posterior diameter","synonyms":[{"name":"high anterior-posterior diameter","type":"exact"}],"termid":"PATO:0002043"}


id: PBO:0077095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell immunoglobulin and mucin domain containing 4","termid":"PBO:0077095"}


id: PBO:0083776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear protein; required for biogenesis of the small ribosomal subunit; has a possible role in the osmoregulatory glycerol response; putative homolog of human NOM1 which is implicated in acute myeloid leukemia","termid":"PBO:0083776"}


id: PBO:0011436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element/transposon Tf2-type","termid":"PBO:0011436"}


id: PBO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (predicted)","termid":"PBO:0002054"}


id: PBO:0005785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf26","termid":"PBO:0005785"}


id: PBO:0064676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 11","termid":"PBO:0064676"}


id: PBO:0005841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase Tmp1","termid":"PBO:0005841"}


id: FYPO:0007810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type) during a cellular response to a pheromone.","definition_xrefs":["PomBase:mah","PMID:11950884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules","termid":"FYPO:0007809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cytoplasmic microtubules during cellular response to pheromone","synonyms":[{"name":"normal cytoplasmic microtubule morphology during cellular response to pheromone","type":"exact"},{"name":"normal cytoplasmic microtubule structure during cellular response to pheromone","type":"narrow"},{"name":"normal cytoplasmic microtubules during mating projection formation","type":"related"},{"name":"normal cytoplasmic microtubules during response to pheromone","type":"exact"},{"name":"normal microtubules during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0007810"}


id: PBO:0057697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1285-2","termid":"PBO:0057697"}


id: GO:1903006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","PMID:22970133","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein deubiquitination","termid":"GO:1903003"},{"relation_name":"is_a","term_name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"},{"relation_name":"positively_regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein K63-linked deubiquitination","synonyms":[{"name":"activation of protein K63-linked deubiquitination","type":"narrow"},{"name":"up regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked deubiquitination","type":"exact"}],"termid":"GO:1903006"}


id: PR:Q09872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eti1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.09","synonyms":[{"name":"Spom972h-eti1","type":"exact"}],"termid":"PR:Q09872"}


id: PR:O42649
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR18937:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.09c","secondary_identifiers":["UniProtKB:O42649"],"synonyms":[{"name":"SPAC10F6.09c","type":"related"},{"name":"Spom972h-SMC3","type":"exact"},{"name":"cohesin complex Psm3 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"smc3","type":"related"}],"termid":"PR:O42649"}


id: GO:0044157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from a host cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell projection","termid":"GO:0044157"}


id: GO:0033038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble bitter compounds to initiate a change in cell activity. These receptors are responsible for the sense of bitter taste.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"bitter taste receptor activity","termid":"GO:0033038"}


id: GO:0008834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans-poly-cis-decaprenyl diphosphate + isopentenyl diphosphate = diphosphate + di-trans-poly-cis-undecaprenyl diphosphate.","definition_xrefs":["EC:2.5.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"di-trans,poly-cis-undecaprenyl-diphosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-8999","RHEA:27551"],"synonyms":[{"name":"UPP synthetase activity","type":"related"},{"name":"bactoprenyl-diphosphate synthase activity","type":"related"},{"name":"di-trans,poly-cis-decaprenyl-diphosphate:isopentenyl-diphosphate undecaprenylcistransferase activity","type":"related"},{"name":"di-trans,poly-cis-decaprenylcistransferase activity","type":"exact"},{"name":"undecaprenyl diphosphate synthase activity","type":"exact"},{"name":"undecaprenyl diphosphate synthetase activity","type":"related"},{"name":"undecaprenyl pyrophosphate synthase activity","type":"related"},{"name":"undecaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"undecaprenyl-diphosphate synthase activity","type":"related"}],"termid":"GO:0008834"}


id: PBO:0090028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, metallo-beta-lactamase/beta-CASP protein Cft2","termid":"PBO:0090028"}


id: GO:0061782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a transport vesicle with a target membrane on another vesicle.","definition_xrefs":["GOC:bf","PMID:16618809","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle fusion with vesicle","synonyms":[{"name":"vesicle to vesicle fusion","type":"exact"},{"name":"vesicle-vesicle fusion","type":"exact"}],"termid":"GO:0061782"}


id: PBO:0042672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 6","termid":"PBO:0042672"}


id: GO:0006371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which excision of introns from the primary transcript of messenger RNA (mRNA) is followed by ligation of the two exon termini exposed by removal of each intron, so that mRNA consisting only of the joined exons is produced.","definition_xrefs":["ISBN:0198506732","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA splicing (obsolete GO:0006371)","synonyms":[{"name":"mRNA splicing","type":"exact"}],"termid":"GO:0006371"}


id: GO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensinogen metabolites in the kidney modulate the force with which blood passes through the renal circulatory system. The process begins when renin cleaves angiotensinogen.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by local renal renin-angiotensin","termid":"GO:0003086"}


id: GO:1903641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["PMID:11123201","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastric acid secretion","termid":"GO:0060454"},{"relation_name":"is_a","term_name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"},{"relation_name":"positively_regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gastrin-induced gastric acid secretion","synonyms":[{"name":"activation of gastrin-induced gastric acid secretion","type":"narrow"},{"name":"up regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"up-regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"upregulation of gastrin-induced gastric acid secretion","type":"exact"}],"termid":"GO:1903641"}


id: GO:1902075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus.","definition_xrefs":["GOC:mls","PMID:16666921","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to salt","termid":"GO:1902074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to salt","synonyms":[{"name":"cellular response to salinity","type":"narrow"}],"termid":"GO:1902075"}


id: GO:0017196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal methionine of proteins to form the derivative N-acetyl-L-methionine.","definition_xrefs":["RESID:AA0049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-methionine acetylation","termid":"GO:0017196"}


id: PBO:0046020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 1","termid":"PBO:0046020"}


id: GO:0042588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, cytoplasmic secretory granule found in enzyme-secreting cells and visible by light microscopy. Contain zymogen, an inactive enzyme precursor, often of a digestive enzyme.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"zymogen granule","termid":"GO:0042588"}


id: PBO:0039568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD62P1-PARP4P3 readthrough, transcribed pseudogene","termid":"PBO:0039568"}


id: PBO:0091297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10","termid":"PBO:0091297"}


id: GO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["TC:3.A.1.3.1","EC:3.6.3.21"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine/arginine/lysine/ornithine porter activity (obsolete GO:0015597)","synonyms":[{"name":"histidine/arginine/lysine/ornithine porter activity","type":"exact"}],"termid":"GO:0015597"}


id: PBO:0051090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 2","termid":"PBO:0051090"}


id: FYPO:0000807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is abnormal. Kinetochore organization results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, the chromosomal attachment point for the spindle microtubules.","definition_xrefs":["GO:0051383","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal kinetochore organization","synonyms":[{"name":"abnormal kinetochore organisation","type":"exact"},{"name":"abnormal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"abnormal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000807"}


id: PBO:0043637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinator of PRMT5 and differentiation stimulator","termid":"PBO:0043637"}


id: GO:0035223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the patterns of cell differentiation in the leg imaginal disc.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"part_of","term_name":"leg disc development","termid":"GO:0035218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc pattern formation","termid":"GO:0035223"}


id: PBO:0081246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 17","termid":"PBO:0081246"}


id: GO:0150024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an oxidised low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["PMID:27607416","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidised low-density lipoprotein particle clearance","synonyms":[{"name":"ox-LDL particle clearance","type":"exact"},{"name":"oxLDL particle clearance","type":"exact"},{"name":"oxidised LDL particle clearance","type":"exact"},{"name":"oxidized LDL particle clearance","type":"exact"},{"name":"oxidized low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:0150024"}


id: PBO:0077201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM4SF18 antisense RNA 1","termid":"PBO:0077201"}


id: PBO:0013010
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Homologue of HOG1","termid":"PBO:0013010"}


id: PBO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase","termid":"PBO:0090081"}


id: PBO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 33","termid":"PBO:0051609"}


id: PBO:0068525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 124, pseudogene","termid":"PBO:0068525"}


id: GO:0010328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, into a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"auxin influx transmembrane transporter activity","synonyms":[{"name":"auxin influx facilitator","type":"related"}],"termid":"GO:0010328"}


id: PBO:0069863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1150, pseudogene","termid":"PBO:0069863"}


id: PBO:0084174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hippo-like kinase of the Mitotic Exit Network; promotes exit by activating the Dbf2p kinase; component of a non-canonical Hippo pathway with Sps1p required for prospore membrane closure, spindle disassembly and sustained release of Cdc14p during meiotic anaphase II; complexes with Sps1p and contributes to its phosphorylation; phosphorylates the RNAPII CTD during mitosis; localizes to the bud neck and SPB during anaphase and telophase; relocalizes to the cytoplasm upon DNA replication stress","termid":"PBO:0084174"}


id: PBO:0050952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon epsilon","termid":"PBO:0050952"}


id: GO:0120183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of focal adhesion disassembly","termid":"GO:0120182"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"},{"relation_name":"positively_regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of focal adhesion disassembly","termid":"GO:0120183"}


id: GO:0016897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity","termid":"GO:0004532"},{"relation_name":"is_a","term_name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","termid":"GO:0016797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0004527","GO:0016787","GO:0016788","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"RNA exonuclease activity, producing 3'-phosphomonoesters","secondary_identifiers":["EC:3.1.14.-"],"synonyms":[{"name":"exoribonuclease activity, producing 3'-phosphomonoesters","type":"exact"}],"termid":"GO:0016897"}


id: PBO:0029433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029433"}


id: PBO:0039403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 4","termid":"PBO:0039403"}


id: GO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon catabolic process","synonyms":[{"name":"halogenated hydrocarbon breakdown","type":"exact"},{"name":"halogenated hydrocarbon catabolism","type":"exact"},{"name":"halogenated hydrocarbon degradation","type":"exact"}],"termid":"GO:0042206"}


id: PBO:0109042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane palmitoyltransferase Pfa5","termid":"PBO:0109042"}


id: GO:0009323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of an acetyl group to ribosomal-protein alanine, forming ribosomal-protein acetylalanine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal-protein-alanine N-acetyltransferase complex (obsolete GO:0009323)","termid":"GO:0009323"}


id: PBO:0026863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abolished_mitotic_sister_chromatid_separation,_with_mononucleate_and_anucleate_compartment_formation","termid":"PBO:0026863"}


id: GO:0080010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["PMID:18450450"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0080010)","synonyms":[{"name":"regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0080010"}


id: GO:1905150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:24198377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of voltage-gated sodium channel activity","synonyms":[{"name":"regulation of voltage gated sodium channel activity","type":"exact"},{"name":"regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"regulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905150"}


id: PBO:0029541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_and_spheroid_cells_(obsolete_FYPO:0002181)","termid":"PBO:0029541"}


id: PBO:0054971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2385","termid":"PBO:0054971"}


id: PBO:0047413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 4 pseudogene 1","termid":"PBO:0047413"}


id: PBO:0034065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_developmental_induction_of","termid":"PBO:0034065"}


id: PBO:0080977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB11 antisense RNA 1","termid":"PBO:0080977"}


id: FYPO:0007982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which all detectable microtubules are present in a single bundle and are not normally crosslinked, resulting in an aster-like organisation. See PMID:15068790.","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single microtubule bundle during mitotic interphase","termid":"FYPO:0002400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002399"],"is_obsolete":false,"name":"single microtubule bundle with aster-like microtubules","termid":"FYPO:0007982"}


id: FYPO:0003372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during one or both meiotic nuclear divisions. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during meiotic cell cycle","termid":"FYPO:0006975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"RNA absent from cell during meiosis","synonyms":[{"name":"RNA absent from cell during meiotic nuclear division","type":"exact"},{"name":"transcripts absent from cell during meiosis","type":"exact"},{"name":"undetectable cellular RNA level during meiosis","type":"exact"}],"termid":"FYPO:0003372"}


id: GO:0030836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"positive regulation of actin filament depolymerization","secondary_identifiers":["GO:0030045"],"synonyms":[{"name":"actin filament destabilization","type":"exact"},{"name":"activation of actin filament depolymerization","type":"narrow"},{"name":"positive regulation of actin depolymerization","type":"exact"},{"name":"positive regulation of actin polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of actin filament depolymerization","type":"narrow"},{"name":"up regulation of actin filament depolymerization","type":"exact"},{"name":"up-regulation of actin filament depolymerization","type":"exact"},{"name":"upregulation of actin filament depolymerization","type":"exact"}],"termid":"GO:0030836"}


id: PBO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 antisense RNA 1","termid":"PBO:0047828"}


id: PBO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA30 protein (predicted)","termid":"PBO:0002533"}


id: GO:0033938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6) linkages between alpha-L-fucose and N-acetyl-D-glucosamine in glycopeptides such as immunoglobulin G glycopeptide and fucosyl-asialo-agalacto-fetuin.","definition_xrefs":["EC:3.2.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-L-fucosidase activity","termid":"GO:0004560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"1,6-alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.127-RXN"],"synonyms":[{"name":"1,6-L-fucosyl-N-acetyl-D-glucosaminylglycopeptide fucohydrolase activity","type":"related"}],"termid":"GO:0033938"}


id: GO:1904756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of gut granule assembly","termid":"GO:1904755"},{"relation_name":"negatively_regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of gut granule assembly","synonyms":[{"name":"down regulation of gut granule assembly","type":"exact"},{"name":"down regulation of gut granule biogenesis","type":"exact"},{"name":"down regulation of gut granule formation","type":"exact"},{"name":"down-regulation of gut granule assembly","type":"exact"},{"name":"down-regulation of gut granule biogenesis","type":"exact"},{"name":"down-regulation of gut granule formation","type":"exact"},{"name":"downregulation of gut granule assembly","type":"exact"},{"name":"downregulation of gut granule biogenesis","type":"exact"},{"name":"downregulation of gut granule formation","type":"exact"},{"name":"inhibition of gut granule assembly","type":"narrow"},{"name":"inhibition of gut granule biogenesis","type":"narrow"},{"name":"inhibition of gut granule formation","type":"narrow"},{"name":"negative regulation of gut granule biogenesis","type":"exact"},{"name":"negative regulation of gut granule formation","type":"exact"}],"termid":"GO:1904756"}


id: PBO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-associated cyclin-dependent protein kinase Lsk1","termid":"PBO:0002304"}


id: GO:0034580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methyloctanoyl-CoA = 4-methyloct-2-enoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-methyloctanoyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.99.-"],"termid":"GO:0034580"}


id: PBO:0047981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member H, pseudogene","termid":"PBO:0047981"}


id: GO:0004252
data:
  {"annotated_genes":["SJAG_02432","SJAG_00984","SJAG_00737","SJAG_04928","SJAG_04785","SJAG_03258","SJAG_05286","SJAG_03261","SJAG_04398","SJAG_03121","SJAG_03910","SJAG_02809","SJAG_03648","SJAG_01285","SJAG_01136"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73572,74052,74591,75244,76048,77927,87059,88687,89564,96580,99072,99078,103261,104354,113391],"is_not":false,"summary":null,"term":"GO:0004252"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"serine-type peptidase activity","termid":"GO:0008236"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_02432":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140096","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"serine-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9769949","Reactome:R-HSA-8855825","Reactome:R-HSA-9655046","Reactome:R-HSA-9770187","Reactome:R-HSA-166817","Reactome:R-HSA-381461","Reactome:R-HSA-159796","Reactome:R-HSA-1655842","Reactome:R-HSA-174551","Reactome:R-HSA-8865275","Reactome:R-HSA-9699007","EC:3.4.21.-","Reactome:R-HSA-159771","Reactome:R-HSA-976743","Reactome:R-HSA-8850831","Reactome:R-HSA-140700","Reactome:R-HSA-166753","Reactome:R-HSA-381135","Reactome:R-HSA-1566981","Reactome:R-HSA-2471621","Reactome:R-HSA-9830882","Reactome:R-HSA-9710263","Reactome:R-HSA-1602473","Reactome:R-HSA-3928657","Reactome:R-HSA-6801687","Reactome:R-HSA-1602466","Reactome:R-HSA-1604359","Reactome:R-HSA-265301","Reactome:R-HSA-1604763","Reactome:R-HSA-1604690","Reactome:R-HSA-6800200","Reactome:R-HSA-8874205","Reactome:R-HSA-171288","Reactome:R-HSA-3788061","Reactome:R-HSA-381446","Reactome:R-HSA-158747","Reactome:R-HSA-381466","Reactome:R-HSA-3266557","Reactome:R-HSA-400492","Reactome:R-HSA-9023178","Reactome:R-HSA-9023196","Reactome:R-HSA-5210935","Reactome:R-HSA-9033490","Reactome:R-HSA-1454843","Reactome:R-HSA-9673223","Reactome:R-HSA-140664","Reactome:R-HSA-1604732","Reactome:R-HSA-8874186","Reactome:R-HSA-9708859","Reactome:R-HSA-2168960","Reactome:R-HSA-9698988","Reactome:R-HSA-9710106","Reactome:R-HSA-382061","Reactome:R-HSA-3785684","Reactome:R-HSA-1604712","Reactome:R-HSA-1604731","Reactome:R-HSA-140736","Reactome:R-HSA-6807224","Reactome:R-HSA-9033524","Reactome:R-HSA-1602458","Reactome:R-HSA-9668253","Reactome:R-HSA-9653249","Reactome:R-HSA-9686710","Reactome:R-HSA-140870","Reactome:R-HSA-9023632","Reactome:R-HSA-9662786","Reactome:R-HSA-2471842","Reactome:R-HSA-1181152","Reactome:R-HSA-2168923","Reactome:R-HSA-140599","Reactome:R-HSA-1604722","Reactome:R-HSA-158333","Reactome:R-HSA-140823","Reactome:R-HSA-159733","Reactome:R-HSA-9023627","Reactome:R-HSA-9686731","Reactome:R-HSA-9033520","Reactome:R-HSA-9830805","Reactome:R-HSA-114697","Reactome:R-HSA-139893","Reactome:R-HSA-9694287","Reactome:R-HSA-170844","Reactome:R-HSA-9033515","Reactome:R-HSA-1602484","Reactome:R-HSA-2022411","Reactome:R-HSA-3814820","Reactome:R-HSA-158137","Reactome:R-HSA-173626","Reactome:R-HSA-6800198","Reactome:R-HSA-977371","Reactome:R-HSA-9829030","Reactome:R-HSA-1592436","Reactome:R-HSA-9023633","Reactome:R-HSA-158925","Reactome:R-HSA-400459","Reactome:R-HSA-1592314","Reactome:R-HSA-159773","Reactome:R-HSA-173680","Reactome:R-HSA-158744","Reactome:R-HSA-5607002","Reactome:R-HSA-158766","Reactome:R-HSA-1602488","Reactome:R-HSA-140696","Reactome:R-HSA-158311","Reactome:R-HSA-158750","Reactome:R-HSA-2482180","Reactome:R-HSA-1592316","Reactome:R-HSA-173745","Reactome:R-HSA-5578783","Reactome:R-HSA-163798","Reactome:R-HSA-141040","Reactome:R-HSA-1592371","Reactome:R-HSA-9033530","Reactome:R-HSA-183130","Reactome:R-HSA-163843","Reactome:R-HSA-8874212","Reactome:R-HSA-1604368","Reactome:R-HSA-159728","Reactome:R-HSA-8865276","Reactome:R-HSA-2172405","Reactome:R-HSA-1592362","Reactome:R-HSA-1592398","Reactome:R-HSA-381798","Reactome:R-HSA-422021","Reactome:R-HSA-2534206","Reactome:R-HSA-1912369","Reactome:R-HSA-1474197","Reactome:R-HSA-1566979","Reactome:R-HSA-8852716","Reactome:R-HSA-977615","Reactome:R-HSA-9694661","Reactome:R-HSA-6800299","Reactome:R-HSA-166792","Reactome:R-HSA-187020","Reactome:R-HSA-159868","Reactome:R-HSA-9023626","Reactome:R-HSA-1592297","Reactome:R-HSA-186785","Reactome:R-HSA-9668365","Reactome:R-HSA-1799329","Reactome:R-HSA-2214330","Reactome:R-HSA-8874206","Reactome:R-HSA-1604752","Reactome:R-HSA-5691512","Reactome:R-HSA-8849857","Reactome:R-HSA-9666383","Reactome:R-HSA-1604741","Reactome:R-HSA-158313","Reactome:R-HSA-2514823","Reactome:R-HSA-400496","Reactome:R-HSA-2514772","Reactome:R-HSA-1604360","Reactome:R-HSA-381500","Reactome:R-HSA-8849826","Reactome:R-HSA-141026","Reactome:R-HSA-140769","Reactome:R-HSA-158982","Reactome:R-HSA-158419","Reactome:R-HSA-1592270","Reactome:R-HSA-1566962","Reactome:R-HSA-2534160","Reactome:R-HSA-2534260","Reactome:R-HSA-183122","Reactome:R-HSA-140777","Reactome:R-HSA-5210912","Reactome:R-HSA-9033506","Reactome:R-HSA-5591040","Reactome:R-HSA-9033529","Reactome:R-HSA-8874145","Reactome:R-HSA-9670874","Reactome:R-HSA-9829200","Reactome:R-HSA-158300","Reactome:R-HSA-1912372","Reactome:R-HSA-8874204","Reactome:R-HSA-2129357","Reactome:R-HSA-422051","Reactome:R-HSA-158942","Reactome:R-HSA-158164","Reactome:R-HSA-173631","Reactome:R-HSA-140840","Reactome:R-HSA-1592278"],"synonyms":[{"name":"blood coagulation factor activity","type":"related"},{"name":"serine elastase activity","type":"related"}],"termid":"GO:0004252","terms_by_termid":{"GO:0004252":null}}


id: PBO:0049455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1","termid":"PBO:0049455"}


id: PBO:0090963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Efr3","termid":"PBO:0090963"}


id: PBO:0049888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 7","termid":"PBO:0049888"}


id: GO:1900168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor production","termid":"GO:1900166"},{"relation_name":"positively_regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"activation of glial cell line-derived neurotrophic factor secretion","type":"narrow"},{"name":"positive regulation of GDNF production","type":"exact"},{"name":"positive regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"positive regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900168"}


id: GO:0043921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a host organism modulates the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation by host of viral transcription","termid":"GO:0043922"},{"relation_name":"is_a","term_name":"negative regulation by host of viral process","termid":"GO:0044793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral transcription","synonyms":[{"name":"regulation by host of viral transcription","type":"exact"},{"name":"regulation of viral transcription by host","type":"exact"}],"termid":"GO:0043921"}


id: PBO:0047872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(p24.2)","termid":"PBO:0047872"}


id: PBO:0036083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0036083"}


id: GO:0003795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, microbial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antimicrobial peptide activity (obsolete GO:0003795)","synonyms":[{"name":"antimicrobial peptide activity","type":"exact"}],"termid":"GO:0003795"}


id: GO:0010967
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106284],"is_not":false,"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010967","terms_by_termid":{"GO:0010967":null}}


id: GO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanolamine + 1-alkyl-sn-glycerol 3-phosphate.","definition_xrefs":["MetaCyc:3.1.4.39-RXN","EC:3.1.4.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"alkylglycerophosphoethanolamine phosphodiesterase activity","secondary_identifiers":["RHEA:15965"],"synonyms":[{"name":"1-alkyl-sn-glycero-3-phosphoethanolamine ethanolaminehydrolase activity","type":"related"},{"name":"lysophospholipase D activity","type":"related"}],"termid":"GO:0047391"}


id: PBO:0076402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor, RNA polymerase I subunit D","termid":"PBO:0076402"}


id: PBO:0083909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone oxidoreductase; induced by oxidative stress in a Yap1p dependent manner; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; PST2 has a paralog, RFS1, that arose from the whole genome duplication","termid":"PBO:0083909"}


id: GO:0070827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin organization process that preserves chromatin in a stable functional or structural state.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin maintenance (obsolete GO:0070827)","termid":"GO:0070827"}


id: GO:0042013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-19.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-19 binding","synonyms":[{"name":"IL-19 binding","type":"exact"}],"termid":"GO:0042013"}


id: GO:0061040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a female gonad is generated and organized.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonad morphogenesis","termid":"GO:0035262"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female gonad morphogenesis","synonyms":[{"name":"ovary morphogenesis","type":"related"}],"termid":"GO:0061040"}


id: PBO:0057850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3161","termid":"PBO:0057850"}


id: PBO:0085313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylethanolamine methyltransferase (PEMT); catalyzes the first step in the conversion of phosphatidylethanolamine to phosphatidylcholine during the methylation pathway of phosphatidylcholine biosynthesis","termid":"PBO:0085313"}


id: GO:0009663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plasmodesma, a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["PMID:29880547","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmodesma organization","synonyms":[{"name":"plasmodesma organisation","type":"exact"},{"name":"plasmodesma organization and biogenesis","type":"related"},{"name":"plasmodesmata organization and biogenesis","type":"related"}],"termid":"GO:0009663"}


id: PBO:0059374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 7","termid":"PBO:0059374"}


id: GO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"regulation of TLR5 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034147"}


id: GO:0004416
data:
  {"annotated_genes":["SJAG_01596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72818],"is_not":false,"summary":null,"term":"GO:0004416"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy carboxylate.","definition_xrefs":["EC:3.1.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6783221","RHEA:25245","MetaCyc:GLYOXII-RXN"],"synonyms":[{"name":"S-(2-hydroxyacyl)glutathione hydrolase activity","type":"related"},{"name":"S-2-hydroxylacylglutathione hydrolase activity","type":"related"},{"name":"acetoacetylglutathione hydrolase activity","type":"related"},{"name":"glyoxalase II activity","type":"related"}],"termid":"GO:0004416","terms_by_termid":{"GO:0004416":null}}


id: PBO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 48","termid":"PBO:0045858"}


id: GO:0010326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methionine + a 2-oxo acid = 2-oxo-4-methylthiobutanoate + an amino acid.","definition_xrefs":["PMID:17056707","MetaCyc:RXN-2201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methionine-oxo-acid transaminase activity","secondary_identifiers":["MetaCyc:R15-RXN"],"termid":"GO:0010326"}


id: PBO:0078068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 58 (non-functional)","termid":"PBO:0078068"}


id: GO:0033790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NAD(P)H + H+ = 2,5-bis-hydroxymethylfuran + NAD(P)+.","definition_xrefs":["PMID:15338422","GOC:mah","PMID:16652391","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase activity","termid":"GO:0033790"}


id: PBO:0067160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 213, pseudogene","termid":"PBO:0067160"}


id: GO:0010324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infolding of a membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane invagination","secondary_identifiers":["GO:1902534"],"synonyms":[{"name":"single-organism membrane invagination","type":"related"}],"termid":"GO:0010324"}


id: PBO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 9","termid":"PBO:0043141"}


id: GO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of left cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left ventricular cardiac muscle tissue morphogenesis","synonyms":[{"name":"left ventricular myocardium morphogenesis","type":"exact"}],"termid":"GO:0003220"}


id: GO:1902309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["PMID:11953308","GOC:BHF","GOC:rl","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein dephosphorylation","termid":"GO:0035308"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine dephosphorylation","termid":"GO:1902308"},{"relation_name":"negatively_regulates","term_name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-serine dephosphorylation","synonyms":[{"name":"down regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"down-regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"downregulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"inhibition of peptidyl-serine dephosphorylation","type":"narrow"}],"termid":"GO:1902309"}


id: GO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tRNA exon ligation process in which the splice junction phosphate is derived from the 2',3' cyclic phosphate at the 3'-end of the 5'-exon. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in wheat, Chlamydomonas, and vertebrate species including humans.","definition_xrefs":["PMID:9299409","PMID:17786051","PMID:18217203","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA exon ligation","termid":"GO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate","termid":"GO:0000971"}


id: GO:1902573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["PMID:20179351","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of serine-type peptidase activity","termid":"GO:1902571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine-type peptidase activity","synonyms":[{"name":"activation of serine protease activity","type":"narrow"},{"name":"activation of serine-type peptidase activity","type":"narrow"},{"name":"positive regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine-type peptidase activity","type":"exact"},{"name":"up-regulation of serine protease activity","type":"narrow"},{"name":"up-regulation of serine-type peptidase activity","type":"exact"},{"name":"upregulation of serine protease activity","type":"narrow"},{"name":"upregulation of serine-type peptidase activity","type":"exact"}],"termid":"GO:1902573"}


id: PBO:0065459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 5","termid":"PBO:0065459"}


id: GO:0021873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of a neuroblast located in the forebrain. Neuroblast division gives rise to at least another neuroblast.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuroblast division","termid":"GO:0021873"}


id: PBO:0039332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, germ cell","termid":"PBO:0039332"}


id: SO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-protein_coding gene that encodes a guide_RNA.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gRNA_encoding","synonyms":[{"name":"gRNA encoding","type":"exact"}],"termid":"SO:0000979"}


id: PBO:0065231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 12","termid":"PBO:0065231"}


id: PBO:0054673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2079","termid":"PBO:0054673"}


id: PBO:0091206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu","termid":"PBO:0091206"}


id: GO:0003286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrial septum intermedium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum intermedium development","termid":"GO:0003286"}


id: GO:0033814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA.","definition_xrefs":["EC:2.3.1.176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"propanoyl-CoA C-acyltransferase activity","secondary_identifiers":["RHEA:16865","MetaCyc:2.3.1.176-RXN"],"synonyms":[{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA:propanoyl-CoA C-acyltransferase activity","type":"related"},{"name":"PTE-2","type":"related"},{"name":"SCP-X","type":"related"},{"name":"SCPchi","type":"related"},{"name":"peroxisomal thiolase 2 activity","type":"narrow"},{"name":"sterol carrier protein-X","type":"related"},{"name":"sterol carrier protein-chi","type":"related"}],"termid":"GO:0033814"}


id: PBO:0001941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 6 subunit Pre5 (predicted)","termid":"PBO:0001941"}


id: PBO:0064660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4C","termid":"PBO:0064660"}


id: FYPO:0005568
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[114309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000026"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the establishment or maintenance of cell polarity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_04280":null},"genotype_count":2,"genotypes_by_uniquename":{"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell polarity","references_by_uniquename":{"PMID:30664646":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_00409"],"single_locus_genotype_uniquenames":["gpd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell polarity process","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity","type":"exact"},{"name":"cell polarity defects","type":"exact"}],"termid":"FYPO:0005568","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000198":null,"FYPO_EXT:0000001":null}}


id: PBO:0051224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable IGHV8-51-1 (non-functional)","termid":"PBO:0051224"}


id: PBO:0056241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog 2, pseudogene","termid":"PBO:0056241"}


id: GO:0015176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall of bacteria, where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some catalyze export of nucleases.","definition_xrefs":["TC:1.A.38.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete holin (obsolete GO:0015176)","synonyms":[{"name":"holin","type":"exact"}],"termid":"GO:0015176"}


id: PBO:0086617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YNL115C is not an essential gene","termid":"PBO:0086617"}


id: GO:0050900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body.","definition_xrefs":["PMID:8600538","PMID:7507411","PMID:14680625","GOC:add","ISBN:0781735149","PMID:14708592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration","synonyms":[{"name":"immune cell migration","type":"exact"},{"name":"immune cell trafficking","type":"exact"},{"name":"leucocyte migration","type":"exact"},{"name":"leucocyte trafficking","type":"exact"},{"name":"leukocyte trafficking","type":"exact"}],"termid":"GO:0050900"}


id: GO:2000576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of microtubule motor activity.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule motor activity (obsolete GO:2000576)","synonyms":[{"name":"positive regulation of axonemal motor activity","type":"related"},{"name":"positive regulation of dynein","type":"related"},{"name":"positive regulation of dynein ATPase activity","type":"related"},{"name":"positive regulation of kinesin","type":"related"},{"name":"positive regulation of kinesin motor activity","type":"related"},{"name":"positive regulation of kinetochore motor activity","type":"related"}],"termid":"GO:2000576"}


id: PR:O94564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A reticulon-4-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C1773.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.06c","secondary_identifiers":["UniProtKB:O94564"],"synonyms":[{"name":"Spom972h-RTN4IP1","type":"exact"}],"termid":"PR:O94564"}


id: GO:0030042
data:
  {"annotated_genes":["SJAG_03025","SJAG_02700","SJAG_00279","SJAG_01993","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69958],"is_not":false,"summary":null,"term":"GO:0030042"},{"annotations":[77670,78521,87760,74860],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actin filament depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerization","type":"exact"},{"name":"actin depolymerizing activity","type":"related"}],"termid":"GO:0030042","terms_by_termid":{"GO:0030042":null,"GO:0051016":null}}


id: PBO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn2","termid":"PBO:0000880"}


id: PBO:0048166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FZD10 antisense divergent transcript","termid":"PBO:0048166"}


id: PBO:0039498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A21, pseudogene","termid":"PBO:0039498"}


id: SO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified phenylalanine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_phenylalanine","secondary_identifiers":["MOD:00914"],"synonyms":[{"name":"ModPhe","type":"exact"},{"name":"modified L phenylalanine","type":"exact"},{"name":"modified L-phenylalanine","type":"exact"}],"termid":"SO:0001397"}


id: PBO:0074343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 2","termid":"PBO:0074343"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: GO:0098932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall peptidoglycans to allow entry into the host cell.","definition_xrefs":["VZ:3940","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell wall peptidoglycan","synonyms":[{"name":"catabolism of host cell wall peptidoglycan by virus","type":"exact"},{"name":"degradation of host cell wall peptidoglycan by virus","type":"exact"},{"name":"degradation of host peptidoglycans during virus entry","type":"exact"},{"name":"disassembly by virus of host cell wall peptidoglycan","type":"exact"},{"name":"disruption by virus of host cell wall peptidoglycan during virus entry","type":"exact"}],"termid":"GO:0098932"}


id: PBO:0049088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143","termid":"PBO:0049088"}


id: GO:0050645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + limonin = glucosyl-limonin + UDP.","definition_xrefs":["EC:2.4.1.210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"limonoid glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.210-RXN","RHEA:11256"],"synonyms":[{"name":"LGTase activity","type":"related"},{"name":"limonoid UDP-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-limonoid glucosyltransferase activity","type":"related"}],"termid":"GO:0050645"}


id: PBO:0062306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 3","termid":"PBO:0062306"}


id: GO:0098542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to other organism","secondary_identifiers":["GO:0009814"],"synonyms":[{"name":"defence response incompatible interaction","type":"narrow"},{"name":"defence response to pathogen, incompatible interaction","type":"narrow"},{"name":"defense response, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogen","type":"narrow"}],"termid":"GO:0098542"}


id: GO:0071379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"}


id: PBO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIG4 syndrome","termid":"PBO:0005211"}


id: GO:0160094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of nematode pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:18050503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx development","termid":"GO:0160094"}


id: GO:0002101
data:
  {"annotated_genes":["SJAG_02099","SJAG_05249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83824,89340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"}]},"cv_name":"biological_process","definition":"The process in which a cytosine in position 34 of a tRNA is post-transcriptionally modified.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02099":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA wobble cytosine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002101","terms_by_termid":{"GO:0002127":null}}


id: PBO:0056679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEF2C antisense RNA 1","termid":"PBO:0056679"}


id: PBO:0075051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-14","termid":"PBO:0075051"}


id: FYPO:0007276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is normal (i.e. indistinguishable from wild type) during the meiotic cell cycle. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["PMID:31582398","GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal mitochondrion inheritance during meiotic cell cycle","synonyms":[{"name":"normal mitochondrial inheritance during meiotic cell cycle","type":"exact"},{"name":"normal mitochondrion inheritance during meiosis","type":"related"}],"termid":"FYPO:0007276"}


id: PBO:0085948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0085948"}


id: PBO:0086855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication","termid":"PBO:0086855"}


id: GO:0010180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thioglucosidase enzyme.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"thioglucosidase binding","synonyms":[{"name":"myrosinase binding","type":"exact"}],"termid":"GO:0010180"}


id: PBO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 3","termid":"PBO:0043310"}


id: GO:0042086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to an acceptor molecule, dependent on the presence of 5-methyl-5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"5-methyl-5,6,7,8-tetrahydromethanopterin-dependent methyltransferase activity","termid":"GO:0042086"}


id: GO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 5 activity (obsolete GO:0016912)","synonyms":[{"name":"SAP kinase 5 activity","type":"exact"},{"name":"SAPK5","type":"exact"}],"termid":"GO:0016912"}


id: PBO:0070033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1330, pseudogene","termid":"PBO:0070033"}


id: PBO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 6","termid":"PBO:0043094"}


id: PBO:0048189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type B receptor subunit 1","termid":"PBO:0048189"}


id: SO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000072 end_overlapping_gene (obsolete SO:0000072)","termid":"SO:0000072"}


id: GO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit.","definition_xrefs":["GOC:go_curators","ISBN:0195088433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic synaptic transmission","termid":"GO:0060024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"rhythmic excitation","termid":"GO:0043179"}


id: PBO:0055249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2676","termid":"PBO:0055249"}


id: PBO:0063555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally expressed 13","termid":"PBO:0063555"}


id: GO:1902177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:11672522","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902177"}


id: GO:0050463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + NAD(P)+ + H2O = nitrate + NAD(P)H + H+.","definition_xrefs":["MetaCyc:NITRATE-REDUCTASE-NADPH-RXN","EC:1.7.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitrate reductase [NAD(P)H] activity","synonyms":[{"name":"NAD(P)H bispecific nitrate reductase activity","type":"related"},{"name":"NAD(P)H-nitrate reductase activity","type":"related"},{"name":"NAD(P)H2:nitrate oxidoreductase activity","type":"related"},{"name":"NAD(P)H:nitrate oxidoreductase activity","type":"related"},{"name":"assimilatory NAD(P)H-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"related"},{"name":"nitrate reductase (reduced nicotinamide adenine dinucleotide (phosphate)) activity","type":"related"},{"name":"nitrate reductase NAD(P)H activity","type":"related"},{"name":"nitrate reductase [NAD(P)H2]","type":"related"},{"name":"nitrite:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050463"}


id: PBO:0070995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 19","termid":"PBO:0070995"}


id: PBO:0051432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-13 (pseudogene)","termid":"PBO:0051432"}


id: PBO:0047731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 like","termid":"PBO:0047731"}


id: PBO:0030637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ATPase_activity","termid":"PBO:0030637"}


id: PBO:0035967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_checkpoint_complex_level","termid":"PBO:0035967"}


id: PR:O59776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1795.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1795.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.12c","synonyms":[{"name":"Spom972h-SPCC1795.12c","type":"exact"}],"termid":"PR:O59776"}


id: PBO:0077656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 8","termid":"PBO:0077656"}


id: PBO:0048954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 5","termid":"PBO:0048954"}


id: PBO:0080851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 3 pseudogene 1","termid":"PBO:0080851"}


id: GO:0048163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when antral spaces begin to form in the follicle cells. Mitochondria form centers for yolk concentration.","definition_xrefs":["ISBN:0198542771","GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scattered antral spaces stage","synonyms":[{"name":"mammalian oogenesis stage 6","type":"exact"}],"termid":"GO:0048163"}


id: PBO:0028674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_plasma_membrane_to_vacuole_transport_after_nitrogen_starvation","termid":"PBO:0028674"}


id: PBO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.48","termid":"PBO:0004935"}


id: PBO:0079240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 13","termid":"PBO:0079240"}


id: PATO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality inhering in a bearer by virtue of the bearer's being combined, or impregnated, with nitric acid, or some of its compounds.","definition_xrefs":["neurolex:http://neurolex.org/wiki/Category:Nitrated_Molecular_Quality"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated","termid":"PATO:0002217"}


id: PBO:0055822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lecithin retinol acyltransferase","termid":"PBO:0055822"}


id: GO:1901179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of spheroidene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00683","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"spheroidene metabolic process","termid":"GO:1901178"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"spheroidene catabolic process","synonyms":[{"name":"spheroidene breakdown","type":"exact"},{"name":"spheroidene catabolism","type":"exact"},{"name":"spheroidene degradation","type":"exact"}],"termid":"GO:1901179"}


id: PBO:0049828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGF like 3","termid":"PBO:0049828"}


id: PBO:0074643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 35B","termid":"PBO:0074643"}


id: PBO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Rrn10","termid":"PBO:0002812"}


id: GO:1904369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sclerenchyma cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:26025534","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of sclerenchyma cell differentiation","termid":"GO:1904368"},{"relation_name":"positively_regulates","term_name":"sclerenchyma cell differentiation","termid":"GO:0014001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sclerenchyma cell differentiation","synonyms":[{"name":"up regulation of sclerenchyma cell differentiation","type":"exact"},{"name":"up-regulation of sclerenchyma cell differentiation","type":"exact"},{"name":"upregulation of sclerenchyma cell differentiation","type":"exact"}],"termid":"GO:1904369"}


id: GO:0043059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the speed, mechanical force, or rhythm of the anterior movement of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"regulates","term_name":"forward locomotion","termid":"GO:0043056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of forward locomotion","termid":"GO:0043059"}


id: GO:0018584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,5-trichlorophenoxyacetic acid + 1/2 O2 = glyoxylate + 2,4,5-trichlorophenol.","definition_xrefs":["UM-BBD_reactionID:r0359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid oxygenase activity","secondary_identifiers":["EC:1.13.99.-"],"termid":"GO:0018584"}


id: PATO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled spirally downwards.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circinate","termid":"PATO:0001964"}


id: GO:2000697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell differentiation involved in kidney development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"negatively_regulates","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"}


id: PR:Q9C0X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29A3.21 gene.","definition_xrefs":["UniProtKB:Q9C0X0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A3.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.21","synonyms":[{"name":"Spom972h-SPBC29A3.21","type":"exact"}],"termid":"PR:Q9C0X0"}


id: GO:0019388
data:
  {"annotated_genes":["SJAG_01209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104060],"is_not":false,"summary":null,"term":"GO:0019388"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GALDEG-PWY"],"synonyms":[{"name":"galactose breakdown","type":"exact"},{"name":"galactose catabolism","type":"exact"},{"name":"galactose degradation","type":"exact"}],"termid":"GO:0019388","terms_by_termid":{"GO:0019388":null}}


id: SO:0000684
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence targeted by a nuclease enzyme.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_binding_site","termid":"SO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease_sensitive_site","synonyms":[{"name":"nuclease sensitive site","type":"exact"}],"termid":"SO:0000684"}


id: PBO:0054667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2073","termid":"PBO:0054667"}


id: GO:0100052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates G1/S transition of mitotic cell cycle.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by transcription from RNA polymerase II promoter (obsolete GO:0100052)","termid":"GO:0100052"}


id: GO:0008079
data:
  {"annotated_genes":["SJAG_01518","SJAG_02812","SJAG_02189","SJAG_05221","SJAG_00338","SJAG_04283","SJAG_02601","SJAG_03232","SJAG_01696","SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99943,104329,104330],"is_not":false,"summary":null,"term":"GO:0008079"},{"annotations":[102368,97336,91317,71830,111064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003747"},{"annotations":[93979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[73161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"}]},"cv_name":"molecular_function","definition":"Functions in the termination of translation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation factor activity, RNA binding","termid":"GO:0008135"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02812":null,"SJAG_03232":null,"SJAG_04283":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"translation termination factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008079","terms_by_termid":{"GO:0003747":null,"GO:0008079":null,"GO:0016149":null,"GO:0016150":null}}


id: PBO:0062358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily R member 2 pseudogene","termid":"PBO:0062358"}


id: GO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:mah","PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"},{"relation_name":"is_a","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006810","GO:0065003","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle","synonyms":[{"name":"clathrin coating of Golgi-derived vesicle","type":"exact"}],"termid":"GO:0048202"}


id: PBO:0079516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYMS opposite strand RNA","termid":"PBO:0079516"}


id: MOD:01985
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-asparagine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-asparagine.","definition_xrefs":["RESID:AA0622","PubMed:21786372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-asparagine residue","termid":"MOD:02060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-asparagine","synonyms":[{"name":"(2S)-2,4-diamino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-4-oxobutanoic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-asparagine","type":"exact"}],"termid":"MOD:01985"}


id: GO:0006655
data:
  {"annotated_genes":["SJAG_03563","SJAG_03700","SJAG_04317","SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71329,88455,78429,112828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylglycerol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylglycerol anabolism","type":"exact"},{"name":"phosphatidylglycerol biosynthesis","type":"exact"},{"name":"phosphatidylglycerol formation","type":"exact"},{"name":"phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:0006655","terms_by_termid":{"GO:0032049":null}}


id: PBO:0053274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B1","termid":"PBO:0053274"}


id: GO:0097076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses protein kinase activity and activates the I-kappa B kinase complex (IKK) and mitogen-activated protein (MAP) kinases in response to TRAF6 signaling. It comprises the catalytic subunit TAK1 complexed to the regulatory subunits, termed TABs (TAK1-binding subunits).","definition_xrefs":["PMID:17496917","GOC:cna","PMID:16410796","PMID:18021073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transforming growth factor beta activated kinase 1 complex","synonyms":[{"name":"TAK1 kinase complex","type":"exact"}],"termid":"GO:0097076"}


id: PBO:0063277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 3","termid":"PBO:0063277"}


id: PBO:0031600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase","termid":"PBO:0031600"}


id: GO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Similar to cathepsin L, but with much less activity on the terminal bond of Z-Phe-Arg-NHMec, and more activity on the terminal bond of Z-Val-Val-Arg-Xaa compounds.","definition_xrefs":["EC:3.4.22.27"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin S activity (obsolete GO:0004218)","synonyms":[{"name":"cathepsin S activity","type":"exact"}],"termid":"GO:0004218"}


id: GO:0036200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: androsta-1,4-diene-3,17-dione + NADH + H+ + O2 = 9alpha-hydroxyandrosta-1,4-diene-3,17-dione + NAD+ + H2O.","definition_xrefs":["EC:1.14.15.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-ketosteroid 9-alpha-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R09860","RHEA:32199"],"synonyms":[{"name":"3-ketosteroid 9alpha-hydroxylase activity","type":"related"},{"name":"KshAB activity","type":"related"}],"termid":"GO:0036200"}


id: PBO:0087344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase checkpoint protein required for DNA replication; couples DNA helicase and polymerase; stabilizes Pol2p at stalled replication forks during stress, where it forms a pausing complex with Tof1p and is phosphorylated by Mec1p; defines a novel S-phase checkpoint with Hog1p that coordinates DNA replication and transcription upon osmostress; protects uncapped telomeres; Dia2p-dependent degradation mediates checkpoint recovery; exposure to ethanol affects localization; mammalian claspin homolog","termid":"PBO:0087344"}


id: PBO:0039494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A17, pseudogene","termid":"PBO:0039494"}


id: PBO:0081435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 286A","termid":"PBO:0081435"}


id: PR:O14099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2F3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.16","synonyms":[{"name":"Spom972h-SPAC2F3.16","type":"exact"}],"termid":"PR:O14099"}


id: FYECO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 5-fluorouracil (5-FU) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 5-FU","synonyms":[{"name":"+ 5-fluorouracil","type":"exact"}],"termid":"FYECO:0000377"}


id: PBO:0086120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for export of the ribosomal subunits; associates with the RNA components of the pre-ribosomes; has a role in nuclear import in association with Pse1p; also plays a role in the cell cycle and the DNA damage response; contains HEAT-repeats","termid":"PBO:0086120"}


id: FYPO:0003103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from mRNA transcripts measured in a cell is lower than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased mRNA-derived small RNA level","synonyms":[{"name":"decreased accumulation of mRNA-derived small RNAs","type":"related"},{"name":"decreased mRNA-derived small RNA accumulation","type":"related"},{"name":"decreased mRNA-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased mRNA-derived small RNA level during vegetative growth","type":"exact"},{"name":"decreased mRNA-derived small transcript level","type":"exact"},{"name":"decreased protein-coding gene-derived small RNA level","type":"related"},{"name":"reduced mRNA-derived small RNA level","type":"exact"}],"termid":"FYPO:0003103"}


id: GO:0070414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:jp","PMID:9797333","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"part_of","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose metabolism in response to heat stress","synonyms":[{"name":"trehalose metabolic process involved in response to heat stress","type":"exact"}],"termid":"GO:0070414"}


id: GO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-iditol + NAD+ = D-sorbose + NADH.","definition_xrefs":["MetaCyc:D-IDITOL-2-DEHYDROGENASE-RXN","EC:1.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-iditol 2-dehydrogenase activity","secondary_identifiers":["RHEA:12725"],"termid":"GO:0047824"}


id: PBO:0038743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 2","termid":"PBO:0038743"}


id: PBO:0055889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit E","termid":"PBO:0055889"}


id: SO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within the transcript that changes the structure of the translational product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_structure_variant","secondary_identifiers":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"synonyms":[{"name":"translational product structure variant","type":"exact"}],"termid":"SO:0001598"}


id: PBO:0055449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2881","termid":"PBO:0055449"}


id: FYPO:0002379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","termid":"FYPO:0000313"},{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated germ tube","synonyms":[{"name":"inviable germinated spore, without cell division, with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated germ tube","type":"exact"}],"termid":"FYPO:0002379"}


id: FYPO:0005517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing 6-azauracil.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on 6-azauracil","synonyms":[{"name":"normal cell population growth in presence of 6-azauracil","type":"exact"},{"name":"normal cell population growth on 6-azauracil","type":"exact"},{"name":"normal cellular response to 6-azauracil","type":"related"},{"name":"normal vegetative cell population growth on 6-azauracil","type":"exact"}],"termid":"FYPO:0005517"}


id: GO:2001156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of proline catabolic process to glutamate","synonyms":[{"name":"regulation of proline breakdown to glutamate","type":"exact"},{"name":"regulation of proline degradation to glutamate","type":"exact"},{"name":"regulation of proline oxidation","type":"related"}],"termid":"GO:2001156"}


id: PBO:0067044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 63, pseudogene","termid":"PBO:0067044"}


id: PBO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box J1","termid":"PBO:0047801"}


id: FYPO:0004172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to heat","synonyms":[{"name":"decreased protein kinase activity during cellular response to heat stress","type":"exact"},{"name":"reduced protein kinase activity during cellular response to heat","type":"exact"}],"termid":"FYPO:0004172"}


id: PBO:0057548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR663A host gene","termid":"PBO:0057548"}


id: PR:O13706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpz2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP-type zinc finger-containing protein C13F5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.07c","synonyms":[{"name":"Spom972h-hpz2","type":"exact"}],"termid":"PR:O13706"}


id: PBO:0013028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Brr2","termid":"PBO:0013028"}


id: GO:0019323
data:
  {"annotated_genes":["SJAG_03174","SJAG_04276","SJAG_04660","SJAG_02010","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90402,91131,96465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[99604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[90404,96466,91132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[113954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03174":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pentose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pentose breakdown","type":"exact"},{"name":"pentose catabolism","type":"exact"},{"name":"pentose degradation","type":"exact"}],"termid":"GO:0019323","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019568":null,"GO:0042843":null}}


id: PBO:0086966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit A of the heterotrimeric PP2A complex; the heterotrimeric protein phosphatase 2A (PP2A) complex also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III","termid":"PBO:0086966"}


id: PBO:0047924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(11)(q23.3)","termid":"PBO:0047924"}


id: PBO:0058762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6886","termid":"PBO:0058762"}


id: GO:0048378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048378"}


id: PBO:0084412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor; component of the protein kinase C-mediated MAP kinase pathway involved in the maintenance of cell integrity; phosphorylated and activated by the MAP-kinase Slt2p; RLM1 has a paralog, SMP1, that arose from the whole genome duplication","termid":"PBO:0084412"}


id: PATO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001102 absolute stiffness value (obsolete PATO:0001102)","termid":"PATO:0001102"}


id: GO:0062064
data:
  {"annotated_genes":["SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92836],"is_not":false,"summary":null,"term":"GO:0062064"}]},"cv_name":"molecular_function","definition":"Binding to a box C/D snoRNP complex.","definition_xrefs":["PMID:10679015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNP binding","termid":"GO:0030519"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"box C/D snoRNP complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062064","terms_by_termid":{"GO:0062064":null}}


id: PBO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1326, pseudogene","termid":"PBO:0070029"}


id: PATO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Structure quality that is the presence of closed epithelium bounded capsules containing one or more liquid or solid organism substances.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic","synonyms":[{"name":"cysts","type":"narrow"}],"termid":"PATO:0001673"}


id: PBO:0061007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS like 2","termid":"PBO:0061007"}


id: PBO:0061875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP pseudogene 2","termid":"PBO:0061875"}


id: GO:0032248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a purine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleoside transport","termid":"GO:0032244"},{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of purine nucleoside transport","synonyms":[{"name":"activation of purine nucleoside transport","type":"narrow"},{"name":"stimulation of purine nucleoside transport","type":"narrow"},{"name":"up regulation of purine nucleoside transport","type":"exact"},{"name":"up-regulation of purine nucleoside transport","type":"exact"},{"name":"upregulation of purine nucleoside transport","type":"exact"}],"termid":"GO:0032248"}


id: PBO:0040995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOLA3 divergent transcript","termid":"PBO:0040995"}


id: GO:0019233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances. This is a neurological process.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of pain","secondary_identifiers":["Wikipedia:Nociception"],"synonyms":[{"name":"nociception","type":"related"},{"name":"perception of physiological pain","type":"narrow"}],"termid":"GO:0019233"}


id: GO:1904683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metalloendopeptidase activity.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:18591254","GO_REF:0000059","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metalloendopeptidase activity","synonyms":[{"name":"regulation of metalloendoprotease activity","type":"narrow"},{"name":"regulation of metalloendoproteinase activity","type":"narrow"}],"termid":"GO:1904683"}


id: PBO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SnoRNA (predicted)","termid":"PBO:0001692"}


id: PBO:0059802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 28","termid":"PBO:0059802"}


id: RO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly postively regulates process(P2) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P1 directly positively regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"positively_regulates","termid":"RO:0002213"},{"relation_name":"is_a","term_name":"directly_regulates","termid":"RO:0002578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates","termid":"RO:0002629"}


id: PR:Q9Y7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1450.15 gene.","definition_xrefs":["UniProtKB:Q9Y7P2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1450.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.15","synonyms":[{"name":"Spom972h-SPCC1450.15","type":"exact"}],"termid":"PR:Q9Y7P2"}


id: PBO:0029567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_site_selection","termid":"PBO:0029567"}


id: PBO:0062335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 74","termid":"PBO:0062335"}


id: PBO:0054447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1844","termid":"PBO:0054447"}


id: PBO:0071008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 10","termid":"PBO:0071008"}


id: FYPO:0007458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization to the portion of the nuclear envelope enclosing the mitotic nuclear bridge does not occur. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase. Normally, nuclear pores that lack baskets are found in the midzone of the nuclear bridge.","definition_xrefs":["PMID:32848252","PomBase:mah","GO:0140510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear pore localization during mitosis","termid":"FYPO:0003783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished nuclear pore localization to mitotic nuclear bridge","synonyms":[{"name":"abolished NPC localization to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore complex localization to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore distribution to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localisation to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localization in nuclear envelope at mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge during vegetative growth","type":"exact"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge membrane domain","type":"exact"}],"termid":"FYPO:0007458"}


id: PBO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2531","termid":"PBO:0055112"}


id: PBO:0031203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cisplatin","termid":"PBO:0031203"}


id: PBO:0077779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-methyltransferase","termid":"PBO:0077779"}


id: FYPO:0000865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000865"}


id: PBO:0088825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex, CUE domain protein Cue1","termid":"PBO:0088825"}


id: PBO:0083751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved small ribosomal subunit (40s) synthesis factor; component of the 90S preribosome; required for production of 18S rRNA and small ribosomal subunit; contains five consensus RNA-binding domains and binds to the pre-rRNA at two sites within the 18S region","termid":"PBO:0083751"}


id: PR:O94697
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.14c","secondary_identifiers":["UniProtKB:O94697"],"synonyms":[{"name":"Spom972h-RFC3","type":"exact"},{"name":"replication factor C5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94697"}


id: PR:Q9P7M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.11c gene.","definition_xrefs":["UniProtKB:Q9P7M7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P27G11.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.11c","synonyms":[{"name":"Spom972h-SPAP27G11.11c","type":"exact"}],"termid":"PR:Q9P7M7"}


id: GO:0007445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of embryonic cells to the imaginal disc founder populations, groups of cells that are committed to contribute to the formation of an imaginal disc compartment.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of imaginal disc primordium","termid":"GO:0007445"}


id: FYPO:0002214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with abnormal morphology (i.e. size, shape, or structure).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, abnormal germ tube morphology (obsolete FYPO:0002214)","synonyms":[{"name":"cell population inviable after spore germination, abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore population, abnormal germ tube morphology","type":"exact"},{"name":"inviable population of undivided germinated spores with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0002214"}


id: GO:0048744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:dph","GOC:lm","GOC:mtg_muscle","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber development","termid":"GO:0048742"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle fiber development","synonyms":[{"name":"down regulation of skeletal muscle fiber development","type":"exact"},{"name":"down-regulation of skeletal muscle fiber development","type":"exact"},{"name":"downregulation of skeletal muscle fiber development","type":"exact"},{"name":"inhibition of skeletal muscle fiber development","type":"narrow"},{"name":"negative regulation of skeletal muscle fibre development","type":"exact"},{"name":"negative regulation of skeletal myofiber development","type":"exact"},{"name":"negative regulation of skeletal myofibre development","type":"exact"}],"termid":"GO:0048744"}


id: GO:0106364
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98489],"is_not":false,"summary":null,"term":"GO:0106364"}]},"cv_name":"molecular_function","definition":"4-hydroxy-3-all-trans-hexaprenylbenzoate + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 3,4-dihydroxy-5-all-trans-hexaprenylbenzoate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["PMID:21944752","RHEA:20361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-3-all-trans-hexaprenylbenzoate oxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106364","terms_by_termid":{"GO:0106364":null}}


id: PBO:0090025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster transfer protein Nfu1","termid":"PBO:0090025"}


id: PBO:0048662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 4 pseudogene","termid":"PBO:0048662"}


id: PR:P36582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pck1 gene.","definition_xrefs":["UniProtKB:P36582","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C-like 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.14c","synonyms":[{"name":"Spom972h-pck1","type":"exact"}],"termid":"PR:P36582"}


id: PBO:0070263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U12 small nuclear 2, pseudogene","termid":"PBO:0070263"}


id: GO:0044365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change to the frequency, rate or extent of platelet aggregation in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood coagulation in another organism","termid":"GO:0044468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of platelet aggregation in another organism","synonyms":[{"name":"envenomation resulting in modulation of platelet aggregation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0044365"}


id: GO:0030946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. This reaction requires metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0004721","GO:0140096","GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"protein tyrosine phosphatase activity, metal-dependent","termid":"GO:0030946"}


id: PBO:0054935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2349","termid":"PBO:0054935"}


id: PBO:0066662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor interacting serine/threonine kinase 3","termid":"PBO:0066662"}


id: PBO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 1","termid":"PBO:0045471"}


id: PATO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001119 absolute momentum value (obsolete PATO:0001119)","termid":"PATO:0001119"}


id: PBO:0026668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_phase_transition","termid":"PBO:0026668"}


id: PBO:0050242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 20","termid":"PBO:0050242"}


id: PBO:0055055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2471","termid":"PBO:0055055"}


id: PBO:0031119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_HMG-CoA_reductase_activity","termid":"PBO:0031119"}


id: PBO:0072622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head component 9","termid":"PBO:0072622"}


id: SO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification, whereby the 4th residue (a lysine), from the start of the H3 protein is mono-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K4_methylation_site","termid":"SO:0001734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_monomethylation_site","synonyms":[{"name":"H3K4 mono-methylation site","type":"exact"},{"name":"H3K4me1","type":"related"}],"termid":"SO:0001705"}


id: PBO:0085932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; completely overlaps the verified gene YJL077C/ICS3","termid":"PBO:0085932"}


id: GO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin directly modulates the rate of urine output by the kidney.","definition_xrefs":["GOC:mtg_cardio","GOC:tb","ISBN:0721643949","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal output by angiotensin","synonyms":[{"name":"angiotensin mediated control of renal output","type":"related"},{"name":"angiotensin mediated regulation of renal output","type":"exact"},{"name":"angiotensin-mediated regulation of renal output","type":"exact"}],"termid":"GO:0002019"}


id: PBO:0029035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_multinucleate_cell_with_elongated_germ_tube","termid":"PBO:0029035"}


id: FYPO:0005180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to UV.","definition_xrefs":["PMID:15498101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"normal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"normal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"normal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"normal mitotic cell cycle regulation in response to UV during mitotic G1phase","type":"exact"}],"termid":"FYPO:0005180"}


id: PBO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 2","termid":"PBO:0046205"}


id: PBO:0064937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic polypeptide","termid":"PBO:0064937"}


id: PBO:0091381
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6 umol/min/mg","termid":"PBO:0091381"}


id: PBO:0029345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_tRNA_level","termid":"PBO:0029345"}


id: PR:P52822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.12c","synonyms":[{"name":"Spom972h-rpl501","type":"exact"}],"termid":"PR:P52822"}


id: PBO:0086543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR085W is not an essential gene","termid":"PBO:0086543"}


id: PBO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1 like","termid":"PBO:0050847"}


id: PR:Q10196
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.05 gene.","definition_xrefs":["UniProtKB:Q10196","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11C11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.05","synonyms":[{"name":"Spom972h-SPBC11C11.05","type":"exact"}],"termid":"PR:Q10196"}


id: GO:1900454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic depression","termid":"GO:1900452"},{"relation_name":"positively_regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of long-term synaptic depression","synonyms":[{"name":"activation of LTD","type":"related"},{"name":"activation of long term depression","type":"broad"},{"name":"activation of long term synaptic depression","type":"narrow"},{"name":"positive regulation of LTD","type":"related"},{"name":"positive regulation of long term depression","type":"broad"},{"name":"positive regulation of long term synaptic depression","type":"exact"},{"name":"up regulation of LTD","type":"related"},{"name":"up regulation of long term depression","type":"broad"},{"name":"up regulation of long term synaptic depression","type":"exact"},{"name":"up-regulation of LTD","type":"related"},{"name":"up-regulation of long term depression","type":"broad"},{"name":"up-regulation of long term synaptic depression","type":"exact"},{"name":"upregulation of LTD","type":"related"},{"name":"upregulation of long term depression","type":"broad"},{"name":"upregulation of long term synaptic depression","type":"exact"}],"termid":"GO:1900454"}


id: PBO:0029006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intron-specific_abnormal_mRNA_splicing,_via_spliceosome","termid":"PBO:0029006"}


id: GO:0035099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a hemocyte within the embryo. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. In Drosophila, embryonic hemocytes originate from the head mesoderm as a cluster of cells. The cluster splits into two and one group of cells crosses the amnioserosa. Both populations then spread toward the middle of the embryo and then disperse evenly throughout the embryo.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","PMID:12885551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"embryonic hemopoiesis","termid":"GO:0035162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte migration","synonyms":[{"name":"arthropod blood cell migration","type":"exact"},{"name":"hemocyte cell migration","type":"exact"}],"termid":"GO:0035099"}


id: GO:0030305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of heparan sulfate; can degrade both heparan sulfate and heparin glycosaminoglycan chains.","definition_xrefs":["PMID:10916150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"heparanase activity","secondary_identifiers":["Reactome:R-HSA-1667005"],"synonyms":[{"name":"heparinase activity","type":"related"}],"termid":"GO:0030305"}


id: SO:1001192
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that do not have overlapping peptide sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_greater_than_1_polypeptide","termid":"SO:1001189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_disjoint_polypeptides","synonyms":[{"name":"encodes disjoint polypeptides","type":"exact"}],"termid":"SO:1001192"}


id: PBO:0070944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18","termid":"PBO:0070944"}


id: PBO:0034422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_cell_(obsolete_has_target_cell)","termid":"PBO:0034422"}


id: GO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by DNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL3 is the primary Dicer to detect DNA viruses.","definition_xrefs":["PMID:23151511","PMID:17693253","PMID:15165191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against DNA virus","synonyms":[{"name":"DNA VIGS","type":"exact"},{"name":"DNA virus induced gene silencing","type":"exact"},{"name":"DNA virus-induced PTGS","type":"exact"},{"name":"DNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051215"}


id: PR:O42861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.01c","synonyms":[{"name":"Fun thirty-related protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft3","type":"exact"}],"termid":"PR:O42861"}


id: PBO:0040386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit B1","termid":"PBO:0040386"}


id: PBO:0088863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2","termid":"PBO:0088863"}


id: PBO:0072035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 5","termid":"PBO:0072035"}


id: GO:0030552
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70783],"is_not":false,"summary":null,"term":"GO:0030552"}]},"cv_name":"molecular_function","definition":"Binding to cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cAMP binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"3',5' cAMP binding","type":"exact"},{"name":"3',5'-cAMP binding","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate binding","type":"exact"},{"name":"cyclic AMP binding","type":"exact"}],"termid":"GO:0030552","terms_by_termid":{"GO:0030552":null}}


id: PBO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp105","termid":"PBO:0004504"}


id: GO:0071784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the endoplasmic reticulum (ER) cisternal network. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["PMID:20434336","GOC:mah","PMID:16469703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"endoplasmic reticulum cisternal network organization","termid":"GO:0071783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network assembly","synonyms":[{"name":"ER cisternal network assembly","type":"exact"},{"name":"ER cisternal network formation","type":"exact"},{"name":"endoplasmic reticulum cisternal network formation","type":"exact"}],"termid":"GO:0071784"}


