# terms

id: GO:0106387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanosine 5'-monophosphate (GMP) through an inosine 5'-monophosphate (IMP) intermediate.","definition_xrefs":["PMID:25605736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP biosynthetic process","termid":"GO:0006177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"'de novo' GMP biosynthetic process","synonyms":[{"name":"'de novo' guanosine 5'-monophosphate biosynthetic process","type":"exact"}],"termid":"GO:0106387"}


id: PBO:0049750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit zeta pseudogene 1","termid":"PBO:0049750"}


id: PBO:0040321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit epsilon","termid":"PBO:0040321"}


id: PBO:0078000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 1","termid":"PBO:0078000"}


id: PBO:0084030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in manganese homeostasis; overproduction suppresses the sod1 (copper, zinc superoxide dismutase) null mutation","termid":"PBO:0084030"}


id: GO:0036195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a muscle cell projection.","definition_xrefs":["GOC:kmv","PMID:15930100","CL:0000187","PMID:22464329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"muscle cell projection","termid":"GO:0036194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"muscle cell projection membrane","termid":"GO:0036195"}


id: GO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basophil mediated immunity","termid":"GO:0002560"},{"relation_name":"is_a","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I hypersensitivity mediated by basophils","termid":"GO:0002559"}


id: SO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 21S_rRNA, which functions as a component of the large subunit of the ribosome in mitochondria.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002241 rRNA_21S_gene (obsolete SO:0002241)","synonyms":[{"name":"21S rRNA gene","type":"exact"},{"name":"21S_rRNA_gene","type":"exact"}],"termid":"SO:0002241"}


id: PBO:0085842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0085842"}


id: PBO:0041257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 216","termid":"PBO:0041257"}


id: PBO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor IF2 (predicted)","termid":"PBO:0000785"}


id: GO:0048918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line nerve over time, from its formation to the mature structure. The posterior lateral line nerve innervates hair cells of the PLL and projects to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","ISBN:0125296509","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve development","termid":"GO:0048892"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve development","secondary_identifiers":["GO:0021733"],"synonyms":[{"name":"PLLN development","type":"exact"},{"name":"caudal lateral line nerve development","type":"exact"}],"termid":"GO:0048918"}


id: GO:2000461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of eukaryotic cell surface binding (obsolete GO:2000461)","synonyms":[{"name":"negative regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000461"}


id: PBO:0073369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 2","termid":"PBO:0073369"}


id: PBO:0080528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 1","termid":"PBO:0080528"}


id: PBO:0049017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6B pseudogene 2","termid":"PBO:0049017"}


id: PBO:0079132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSKU antisense RNA 1","termid":"PBO:0079132"}


id: GO:0018784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide.","definition_xrefs":["EC:3.8.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"(S)-2-haloacid dehalogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0090","MetaCyc:2-HALOACID-DEHALOGENASE-RXN","RHEA:11192"],"synonyms":[{"name":"(S)-2-haloacid halidohydrolase activity","type":"related"},{"name":"2-haloacid dehalogenase activity","type":"exact"},{"name":"2-haloacid halidohydrolase activity","type":"related"},{"name":"2-haloalkanoic acid dehalogenase activity","type":"related"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"related"},{"name":"2-halocarboxylic acid dehalogenase II activity","type":"related"},{"name":"DL-2-haloacid dehalogenase activity","type":"related"},{"name":"L-2-haloacid dehalogenase activity","type":"related"},{"name":"L-DEX activity","type":"related"},{"name":"halocarboxylic acid halidohydrolase activity","type":"related"}],"termid":"GO:0018784"}


id: PR:P41890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scn3 gene.","definition_xrefs":["UniProtKB:P41890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut9-interacting protein scn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.13","synonyms":[{"name":"Spom972h-scn3","type":"exact"}],"termid":"PR:P41890"}


id: PR:Q1MTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle control protein 50B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 89 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.11c","secondary_identifiers":["UniProtKB:Q1MTQ5"],"synonyms":[{"name":"Spom972h-TMEM30B","type":"exact"}],"termid":"PR:Q1MTQ5"}


id: PBO:0049838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 1","termid":"PBO:0049838"}


id: PBO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetamidase (predicted)","termid":"PBO:0003026"}


id: PBO:0018217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_background","termid":"PBO:0018217"}


id: PBO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phosphatidylserine_absent_from_cell","termid":"PBO:0030335"}


id: PBO:0041942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 10","termid":"PBO:0041942"}


id: PBO:0072306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 3","termid":"PBO:0072306"}


id: PBO:0002707
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin Depolymerizing Factor","termid":"PBO:0002707"}


id: GO:0071265
data:
  {"annotated_genes":["SJAG_02972","SJAG_03102","SJAG_01404","SJAG_04953","SJAG_00419","SJAG_02290","SJAG_03671","SJAG_03614","SJAG_00395","SJAG_00309","SJAG_02689","SJAG_03881","SJAG_02293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106202,65498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[95955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[98844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[95293,90944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[75610,77730,107527,76423,78495,76985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[88086,94339,102201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionine biosynthetic process","termid":"GO:0009086"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_01404":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03881":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"L-methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"L-methionine anabolism","type":"exact"},{"name":"L-methionine biosynthesis","type":"exact"},{"name":"L-methionine formation","type":"exact"},{"name":"L-methionine synthesis","type":"exact"}],"termid":"GO:0071265","terms_by_termid":{"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019284":null,"GO:0019509":null,"GO:0071266":null,"GO:1990355":null}}


id: GO:0086071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an atrial cardiomyocyte to an AV node cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell-AV node cell adhesion involved in cell communication","synonyms":[{"name":"atrial cardiomyocyte-AV node cell adhesion involved in cell communication","type":"exact"},{"name":"atrial cardiomyocyte-atrioventricular node cell adhesion involved in cell communication","type":"exact"}],"termid":"GO:0086071"}


id: PBO:0063519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal kinase","termid":"PBO:0063519"}


id: PBO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc3","termid":"PBO:0017778"}


id: PBO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR46","termid":"PBO:0017088"}


id: GO:0021868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unequal mitotic division of a forebrain radial glial cell that gives rise to a radial glial cell and a ventricular zone cell.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:cls","GOC:jid","PMID:16226447","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete ventricular zone cell-producing asymmetric radial glial cell division in forebrain (obsolete GO:0021868)","termid":"GO:0021868"}


id: PBO:0044765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 49","termid":"PBO:0044765"}


id: GO:2001082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to inulin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"inulin binding","termid":"GO:2001082"}


id: PBO:0068372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF157 antisense RNA 1","termid":"PBO:0068372"}


id: GO:0010787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of inter-Golgi cisterna transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, inter-Golgi cisterna","termid":"GO:0048204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, inter-Golgi cisterna","termid":"GO:0010787"}


id: MOD:00069
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-L-cysteine.","definition_xrefs":["PubMed:9593755","RESID:AA0060","PubMed:4575979","PubMed:10896212","PubMed:9056182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated-L-cysteine","termid":"MOD:01684"},{"relation_name":"is_a","term_name":"alpha-amino palmitoylated residue","termid":"MOD:01685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-palmitoyl-L-cysteine","synonyms":[{"name":"(2R)-2-hexadecanoylamino-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanamido-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanoylamino-3-mercaptopropanoic acid","type":"exact"},{"name":"LIPID N-palmitoyl cysteine","type":"exact"},{"name":"N-(1-oxahexadecyl)-L-cysteine","type":"exact"},{"name":"N-hexadecanoylated L-cysteine","type":"exact"},{"name":"N-palmitoyl-L-cysteine","type":"exact"},{"name":"N-palmitoylated L-cysteine","type":"exact"},{"name":"NPamCys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"}],"termid":"MOD:00069"}


id: PBO:0046411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ependymin related 1","termid":"PBO:0046411"}


id: PBO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex ubiquitin C-terminal hydrolase Ubp8","termid":"PBO:0000473"}


id: PBO:0087477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of box H/ACA snoRNP complex; required for pseudouridylation and processing of pre-18S rRNA","termid":"PBO:0087477"}


id: PBO:0040281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP1A1 antisense RNA 1","termid":"PBO:0040281"}


id: PBO:0052829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 222","termid":"PBO:0052829"}


id: PBO:0048583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 7","termid":"PBO:0048583"}


id: GO:2000451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell extravasation","termid":"GO:2000409"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"}


id: PBO:0067171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 225, pseudogene","termid":"PBO:0067171"}


id: GO:0050300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 6-phosphate.","definition_xrefs":["EC:2.7.1.72","RHEA:22268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 6-kinase activity","secondary_identifiers":["KEGG_REACTION:R02225","MetaCyc:STREPTOMYCIN-6-KINASE-RXN"],"synonyms":[{"name":"APH(6) activity","type":"related"},{"name":"ATP:streptomycin 6-phosphotransferase activity","type":"narrow"},{"name":"SM 6-kinase activity","type":"narrow"},{"name":"streptidine kinase (phosphorylating)","type":"narrow"},{"name":"streptidine kinase activity","type":"narrow"},{"name":"streptomycin 6-O-phosphotransferase activity","type":"narrow"},{"name":"streptomycin 6-kinase (phosphorylating)","type":"narrow"},{"name":"streptomycin 6-kinase activity","type":"narrow"},{"name":"streptomycin 6-phosphotransferase activity","type":"narrow"}],"termid":"GO:0050300"}


id: FYPO:0005371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which linear minichromosomes are lost at a higher frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PMID:11226171","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during vegetative growth","termid":"FYPO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased linear minichromosome loss during vegetative growth","synonyms":[{"name":"increased linear minichromosome loss during mitotic cell cycle","type":"related"},{"name":"mitotic linear minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0005371"}


id: GO:0101020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estrogen + donor-H2 + O2 = 16-alpha-hydroxyestrogen + H2O.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"estrogen 16-alpha-hydroxylase activity","synonyms":[{"name":"oestrogen 16-alpha-hydroxylase activity","type":"exact"}],"termid":"GO:0101020"}


id: PBO:0083009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD domain-containing phospholipase A1; mitochondrial matrix enzyme with sn-1-specific activity, hydrolyzing cardiolipin, PE, PC, PG and PA; implicated in remodeling of mitochondrial phospholipids; antagonistically regulated by Aft1p and Aft2p; in humans, mutations in DDHD1 and DDHD2 genes cause specific types of hereditary spastic paraplegia, while DDL1-defective yeast share similar phenotypes such as mitochondrial dysfunction and defects in lipid metabolism","termid":"PBO:0083009"}


id: PBO:0070854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 7","termid":"PBO:0070854"}


id: GO:0072281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephronin the metanephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in metanephric nephron morphogenesis","termid":"GO:0072281"}


id: PBO:0034233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-simultaneous_with","termid":"PBO:0034233"}


id: PBO:0036534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein (RNP) complex Utp502 (predicted)","termid":"PBO:0036534"}


id: PBO:0077597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 9","termid":"PBO:0077597"}


id: GO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-tyrosine to form peptidyl-O4'-(phospho-5'-adenosine)-L-tyrosine.","definition_xrefs":["RESID:AA0203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine adenylylation","synonyms":[{"name":"peptidyl-tyrosine adenylation","type":"exact"}],"termid":"GO:0018254"}


id: PBO:0083300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential DED1 gene required for translation initiation","termid":"PBO:0083300"}


id: GO:1990413
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small pigmented organelle used in single-celled organisms to detect light.","definition_xrefs":["Wikipedia:Eyespot_apparatus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"eyespot apparatus","synonyms":[{"name":"eyespot","type":"related"},{"name":"stigma","type":"related"}],"termid":"GO:1990413"}


id: GO:0090600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->3)-linked alpha-D-glucose residues with release of alpha-D-glucose.","definition_xrefs":["GOC:sd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"alpha-1,3-glucosidase activity","termid":"GO:0090600"}


id: PBO:0081631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 560","termid":"PBO:0081631"}


id: PBO:0077067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 3","termid":"PBO:0077067"}


id: GO:0031069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hair follicle are generated and organized.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"is_a","term_name":"hair cycle process","termid":"GO:0022405"},{"relation_name":"part_of","term_name":"hair follicle development","termid":"GO:0001942"},{"relation_name":"part_of","term_name":"epidermis morphogenesis","termid":"GO:0048730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle morphogenesis","termid":"GO:0031069"}


id: GO:0090463
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91979],"is_not":false,"summary":null,"term":"GO:0090463"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of lysine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular lysine homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular lysine homeostasis","type":"exact"},{"name":"lysine homeostasis","type":"exact"}],"termid":"GO:0090463","terms_by_termid":{"GO:0090463":null}}


id: PBO:0085930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial protein that physically interacts with Tim23p; null mutant displays reduced respiratory growth","termid":"PBO:0085930"}


id: PBO:0069934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1227, pseudogene","termid":"PBO:0069934"}


id: GO:0002845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peripheral tolerance induction","termid":"GO:0002660"},{"relation_name":"is_a","term_name":"positive regulation of immune response to tumor cell","termid":"GO:0002839"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"positively_regulates","term_name":"tolerance induction to tumor cell","termid":"GO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction to tumor cell","synonyms":[{"name":"activation of tolerance induction to tumor cell","type":"narrow"},{"name":"positive regulation of tolerance induction to tumour cell","type":"exact"},{"name":"stimulation of tolerance induction to tumor cell","type":"narrow"},{"name":"up regulation of tolerance induction to tumor cell","type":"exact"},{"name":"up-regulation of tolerance induction to tumor cell","type":"exact"},{"name":"upregulation of tolerance induction to tumor cell","type":"exact"}],"termid":"GO:0002845"}


id: PBO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_degradation_during_vegetative_growth","termid":"PBO:0035784"}


id: PBO:0084080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II; catalyzes the first step of the riboflavin biosynthesis pathway","termid":"PBO:0084080"}


id: PBO:0088996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Ltc1","termid":"PBO:0088996"}


id: PBO:0028017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_farnesyltransferase_activity","termid":"PBO:0028017"}


id: GO:0061261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"part_of","term_name":"mesonephros morphogenesis","termid":"GO:0061206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:0061261"}


id: PBO:0063551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEF1 and COL16A1 antisense RNA 1","termid":"PBO:0063551"}


id: GO:0032665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-21 production","secondary_identifiers":["GO:0045390"],"synonyms":[{"name":"regulation of IL-21 production","type":"exact"},{"name":"regulation of interleukin-21 biosynthetic process","type":"narrow"}],"termid":"GO:0032665"}


id: MOD:01598
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-117 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01598"}


id: FYPO:0005553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of single-stranded telomeric DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal single-stranded DNA binding","termid":"FYPO:0004384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal single-stranded telomeric DNA binding","synonyms":[{"name":"normal ssDNA telomeric binding","type":"exact"}],"termid":"FYPO:0005553"}


id: FYPO:0007978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased during meiotic prophase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing during meiosis I prophase","termid":"FYPO:0007977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"decreased homologous chromosome pairing during meiosis I prophase","termid":"FYPO:0007978"}


id: GO:2000313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000313"}


id: PBO:0063428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 2","termid":"PBO:0063428"}


id: PBO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030965"}


id: GO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanethiol + O2 + H2O = formaldehyde + hydrogen sulfide + hydrogen peroxide.","definition_xrefs":["EC:1.8.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methanethiol oxidase activity","secondary_identifiers":["MetaCyc:METHANETHIOL-OXIDASE-RXN","UM-BBD_reactionID:r0209","RHEA:11812"],"synonyms":[{"name":"(MM)-oxidase activity","type":"related"},{"name":"MT-oxidase activity","type":"related"},{"name":"methanethiol:oxygen oxidoreductase activity","type":"related"},{"name":"methyl mercaptan oxidase activity","type":"related"},{"name":"methylmercaptan oxidase activity","type":"related"}],"termid":"GO:0018549"}


id: PBO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor Fep1","termid":"PBO:0000364"}


id: GO:2000521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"is_a","term_name":"regulation of immunological synapse formation","termid":"GO:2000520"},{"relation_name":"negatively_regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immunological synapse formation","synonyms":[{"name":"negative regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000521"}


id: PBO:0004095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF assembly factor (CAF-1) complex large subunit Pcf1","termid":"PBO:0004095"}


id: PBO:0083168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF RSC8/YFR037C","termid":"PBO:0083168"}


id: PBO:0091428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt3","termid":"PBO:0091428"}


id: SO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of whether the sequence is the same direction as a feature (forward) or the opposite direction as a feature (reverse).","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direction_attribute","synonyms":[{"name":"direction attribute","type":"exact"}],"termid":"SO:0001029"}


id: GO:0032550
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to a purine ribonucleoside, a compound consisting of a purine base linked to ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"ribonucleoside binding","termid":"GO:0032549"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"purine ribonucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032550","terms_by_termid":{"GO:1905108":null}}


id: PBO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase (predicted)","termid":"PBO:0002028"}


id: PBO:0061058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase 1","termid":"PBO:0061058"}


id: PBO:0040353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 2","termid":"PBO:0040353"}


id: GO:0008709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + NAD+ = 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanate + H+ + NADH.","definition_xrefs":["EC:1.1.1.159","RHEA:19409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cholate 7-alpha-dehydrogenase activity","secondary_identifiers":["MetaCyc:7-ALPHA-HYDROXYSTEROID-DEH-RXN","KEGG_REACTION:R02792"],"synonyms":[{"name":"7-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"7alpha-HSDH","type":"related"},{"name":"7alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"7alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"7alpha-hydroxysteroid:NAD+ 7-oxidoreductase activity","type":"broad"}],"termid":"GO:0008709"}


id: PBO:0090870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion","termid":"PBO:0090870"}


id: PBO:0047736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FNDC1 antisense RNA 1","termid":"PBO:0047736"}


id: PBO:0086060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; null mutant exhibits translation defects, altered polyribosome profiles, and resistance to the translation inhibitor anisomcyin; protein abundance increases in response to DNA replication stress","termid":"PBO:0086060"}


id: GO:1900544
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"positively_regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of purine metabolic process","type":"narrow"},{"name":"activation of purine metabolism","type":"narrow"},{"name":"activation of purine nucleotide metabolic process","type":"narrow"},{"name":"activation of purine nucleotide metabolism","type":"narrow"},{"name":"positive regulation of purine metabolic process","type":"narrow"},{"name":"positive regulation of purine metabolism","type":"narrow"},{"name":"positive regulation of purine nucleotide metabolism","type":"exact"},{"name":"up regulation of purine metabolic process","type":"narrow"},{"name":"up regulation of purine metabolism","type":"narrow"},{"name":"up regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up regulation of purine nucleotide metabolism","type":"exact"},{"name":"up-regulation of purine metabolic process","type":"narrow"},{"name":"up-regulation of purine metabolism","type":"narrow"},{"name":"up-regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up-regulation of purine nucleotide metabolism","type":"exact"},{"name":"upregulation of purine metabolic process","type":"narrow"},{"name":"upregulation of purine metabolism","type":"narrow"},{"name":"upregulation of purine nucleotide metabolic process","type":"exact"},{"name":"upregulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900544","terms_by_termid":{"GO:1905857":null}}


id: PBO:0060752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 2","termid":"PBO:0060752"}


id: GO:0060660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the epidermis of the nipple sheath is uplifted to form an umbrella-like projection.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermis morphogenesis","termid":"GO:0048730"},{"relation_name":"part_of","term_name":"nipple morphogenesis","termid":"GO:0060658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermis morphogenesis involved in nipple formation","termid":"GO:0060660"}


id: PBO:0091986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf23","termid":"PBO:0091986"}


id: PBO:0040266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 1","termid":"PBO:0040266"}


id: PBO:0053225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain","termid":"PBO:0053225"}


id: PBO:0078101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 9","termid":"PBO:0078101"}


id: GO:0006969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete melanotic tumor response (obsolete GO:0006969)","synonyms":[{"name":"melanotic mass response","type":"exact"},{"name":"melanotic tumor response","type":"exact"}],"termid":"GO:0006969"}


id: PBO:0062864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 1","termid":"PBO:0062864"}


id: GO:0141087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"positively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"positive regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141087"}


id: GO:0043702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific cytoplasmic vesicle surrounded by a membrane half-leaflet within which carotenoid pigments are stored. Carotenoid vesicles are synthesized in xanthophores and erythrophore cells and are yellow, orange or red in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"carotenoid vesicle","termid":"GO:0043702"}


id: PBO:0041502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C12orf75 antisense RNA 1","termid":"PBO:0041502"}


id: GO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sevenless receptor activity (obsolete GO:0004927)","synonyms":[{"name":"sevenless receptor activity","type":"exact"}],"termid":"GO:0004927"}


id: PBO:0083199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene MMS4","termid":"PBO:0083199"}


id: PBO:0038529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 3, phospholipase","termid":"PBO:0038529"}


id: _global:independent_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Identifies an entity that was shown not to be required for the ontology term to apply to the annotated gene product.","definition_xrefs":["GOA:rph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"independent_of","secondary_identifiers":["GOREL:0000013","_global:not_dependent_on"],"synonyms":[{"name":"independent_of","type":"exact"},{"name":"not dependent on","type":"exact"}],"termid":"_global:independent_of"}


id: PBO:0075469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 20","termid":"PBO:0075469"}


id: PBO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus end tracking protein","termid":"PBO:0001335"}


id: PBO:0061686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP153 antisense RNA 1","termid":"PBO:0061686"}


id: GO:0019032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral glycoprotein (obsolete GO:0019032)","synonyms":[{"name":"viral glycoprotein","type":"exact"}],"termid":"GO:0019032"}


id: PBO:0080328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 92 pseudogene","termid":"PBO:0080328"}


id: PBO:0039486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A9, pseudogene","termid":"PBO:0039486"}


id: PBO:0030956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_outer_repeat","termid":"PBO:0030956"}


id: GO:0043277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte.","definition_xrefs":["PMID:14685684","GOC:rk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"apoptotic cell clearance","synonyms":[{"name":"apoptotic cell removal","type":"exact"},{"name":"efferocytosis","type":"exact"},{"name":"programmed cell clearance","type":"exact"}],"termid":"GO:0043277"}


id: PBO:0067018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 30, pseudogene","termid":"PBO:0067018"}


id: GO:1990013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexagonal array of electron dense particles attached to the cytoplasmic face of the presynaptic membrane.","definition_xrefs":["ISBN:0716723808","NIF_Subcellular:sao1730664005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic grid","synonyms":[{"name":"pre-synaptic grid","type":"exact"}],"termid":"GO:1990013"}


id: PATO:0001171
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity quality inhering in a bearer by virtue of the bearer's ability to recover its size and shape after deformation in any way.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elasticity","termid":"PATO:0001031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastic","termid":"PATO:0001171"}


id: PBO:0077723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing adaptor 6A","termid":"PBO:0077723"}


id: GO:0016811
data:
  {"annotated_genes":["SJAG_00476","SJAG_04939","SJAG_01416","SJAG_04186","SJAG_04039","SJAG_03227","SJAG_00691","SJAG_01987","SJAG_02618","SJAG_03627","SJAG_04467","SJAG_03013","SJAG_01075","SJAG_03844","SJAG_00450","SJAG_02766","SJAG_05287","SJAG_02276","SJAG_00964","SJAG_01231","SJAG_00392","SJAG_02721","SJAG_00811","SJAG_00581","SJAG_03775"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84079,106558],"is_not":false,"summary":null,"term":"GO:0016811"},{"annotations":[109745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043530"},{"annotations":[87217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[88843,105542,106195,76200,77012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004359"},{"annotations":[99448,107219,104624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[99449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990162"},{"annotations":[104625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[104626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[92579,104627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[95631,59219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043864"},{"annotations":[70434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"},{"annotations":[85560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[109489,99453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[76095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[104770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"},{"annotations":[72052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050152"},{"annotations":[99968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000224"},{"annotations":[67450,77461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"},{"annotations":[77463,77125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070773"},{"annotations":[86906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009039"},{"annotations":[87222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004848"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00450":null,"SJAG_00476":null,"SJAG_00581":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01075":null,"SJAG_01231":null,"SJAG_01416":null,"SJAG_01987":null,"SJAG_02276":null,"SJAG_02618":null,"SJAG_02721":null,"SJAG_02766":null,"SJAG_03013":null,"SJAG_03227":null,"SJAG_03627":null,"SJAG_03775":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04467":null,"SJAG_04939":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9673053","EC:3.5.1.-","Reactome:R-HSA-9673054"],"termid":"GO:0016811","terms_by_termid":{"GO:0000224":null,"GO:0000225":null,"GO:0004099":null,"GO:0004359":null,"GO:0004848":null,"GO:0008418":null,"GO:0008936":null,"GO:0009039":null,"GO:0016811":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0043530":null,"GO:0043864":null,"GO:0046969":null,"GO:0046970":null,"GO:0050152":null,"GO:0070773":null,"GO:0140765":null,"GO:0140937":null,"GO:1990162":null}}


id: GO:0045342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of major histocompatibility protein class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"MHC class II biosynthetic process","synonyms":[{"name":"MHC class II anabolism","type":"exact"},{"name":"MHC class II biosynthesis","type":"exact"},{"name":"MHC class II formation","type":"exact"},{"name":"MHC class II synthesis","type":"exact"},{"name":"major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045342"}


id: FYPO:0007331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing formaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on formaldehyde","synonyms":[{"name":"normal cell population growth in presence of formaldehyde","type":"exact"},{"name":"normal cell population growth on formaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on formaldehyde","type":"exact"}],"termid":"FYPO:0007331"}


id: PBO:0047660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 11","termid":"PBO:0047660"}


id: PBO:0029048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_organization","termid":"PBO:0029048"}


id: PBO:0048592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone 1","termid":"PBO:0048592"}


id: PBO:0027666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere_inner_repeat","termid":"PBO:0027666"}


id: PBO:0042623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudal type homeobox 4","termid":"PBO:0042623"}


id: PBO:0003066
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.22","termid":"PBO:0003066"}


id: PBO:0005550
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperchlesterolemia","termid":"PBO:0005550"}


id: PBO:0062047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 34","termid":"PBO:0062047"}


id: PBO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 11","termid":"PBO:0052499"}


id: PATO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a cytoplasm that contains fluid filled cavities.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolated","termid":"PATO:0000941"}


id: GO:2000984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP citrate synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of ATP citrate synthase activity","termid":"GO:2000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP citrate synthase activity","synonyms":[{"name":"negative regulation of ATP citrate (pro-S)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citrate (pro-S-)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citric lyase activity","type":"exact"},{"name":"negative regulation of ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"exact"},{"name":"negative regulation of ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"negative regulation of acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"negative regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"exact"},{"name":"negative regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"exact"},{"name":"negative regulation of adenosine triphosphate citrate lyase activity","type":"exact"},{"name":"negative regulation of citrate cleavage enzyme activity","type":"related"},{"name":"negative regulation of citrate-ATP lyase activity","type":"exact"},{"name":"negative regulation of citric cleavage enzyme activity","type":"related"}],"termid":"GO:2000984"}


id: PBO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ6 with an S. pombe MTS","termid":"PBO:0036401"}


id: PBO:0056275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1C member 1","termid":"PBO:0056275"}


id: PBO:0060972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor Y subunit gamma","termid":"PBO:0060972"}


id: PATO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"male fertility","termid":"PATO:0000279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male semi-sterile","termid":"PATO:0001762"}


id: GO:0005027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NGF/TNF (6 C-domain) receptor activity (obsolete GO:0005027)","synonyms":[{"name":"NGF/TNF (6 C-domain) receptor activity","type":"exact"}],"termid":"GO:0005027"}


id: FYPO:0006292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which protein localization to the vacuole does not occur, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:26365378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to vacuole, with protein mislocalized to cytosol","synonyms":[{"name":"abolished protein localisation to vacuole, with protein mislocalised to cytosol","type":"exact"},{"name":"abolished protein localization to vacuole, with protein mislocalized to cytosol, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to vacuole, with protein mislocalized to cytosol, during vegetative growth","type":"exact"},{"name":"protein localization to vacuole abolished, with protein mislocalized to cytosol","type":"exact"},{"name":"protein mislocalized from vacuole to cytosol","type":"related"}],"termid":"FYPO:0006292"}


id: PBO:0059143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose phosphate isomerase","termid":"PBO:0059143"}


id: GO:0070236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of activation-induced cell death of T cells.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activation-induced cell death of T cells","termid":"GO:0070235"},{"relation_name":"negatively_regulates","term_name":"activation-induced cell death of T cells","termid":"GO:0006924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activation-induced cell death of T cells","synonyms":[{"name":"down regulation of activation-induced cell death of T cells","type":"exact"},{"name":"down-regulation of activation-induced cell death of T cells","type":"exact"},{"name":"downregulation of activation-induced cell death of T cells","type":"exact"},{"name":"inhibition of activation-induced cell death of T cells","type":"narrow"},{"name":"negative regulation of AICD","type":"broad"},{"name":"negative regulation of activated T cell apoptosis","type":"broad"},{"name":"negative regulation of activation-induced cell death of T lymphocytes","type":"exact"},{"name":"negative regulation of activation-induced cell death of T-cells","type":"exact"},{"name":"negative regulation of activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"negative regulation of antigen-driven apoptosis","type":"broad"}],"termid":"GO:0070236"}


id: PBO:0065977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap associating with DIL domain","termid":"PBO:0065977"}


id: PBO:0017820
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caffeine Induced cell Death","termid":"PBO:0017820"}


id: GO:0010087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of phloem and/or xylem over time, from formation to the mature structure. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phloem or xylem histogenesis","synonyms":[{"name":"vascular tissue development","type":"broad"},{"name":"vascular tissue histogenesis","type":"exact"}],"termid":"GO:0010087"}


id: GO:0047913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gallate + UDP-D-glucose = 1-O-galloyl-beta-D-glucose + UDP.","definition_xrefs":["RHEA:15249","EC:2.4.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gallate 1-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:GALLATE-1-BETA-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03297"],"synonyms":[{"name":"UDP-glucose-vanillate 1-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:gallate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-vanillate 1-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:gallate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:gallate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:vanillate 1-O-glucosyltransferase activity","type":"related"},{"name":"gallate 1-b-glucosyltransferase activity","type":"exact"}],"termid":"GO:0047913"}


id: GO:0009232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"riboflavin catabolic process","synonyms":[{"name":"riboflavin breakdown","type":"exact"},{"name":"riboflavin catabolism","type":"exact"},{"name":"riboflavin degradation","type":"exact"},{"name":"vitamin B2 catabolic process","type":"exact"},{"name":"vitamin B2 catabolism","type":"exact"},{"name":"vitamin G catabolic process","type":"exact"},{"name":"vitamin G catabolism","type":"exact"}],"termid":"GO:0009232"}


id: PBO:0076111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX17 divergent transcript","termid":"PBO:0076111"}


id: GO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, the paranode region of an axon.","definition_xrefs":["PMID:18803321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to axon","termid":"GO:0099612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to paranode region of axon","synonyms":[{"name":"protein localisation to paranode region of axon","type":"exact"}],"termid":"GO:0002175"}


id: PBO:0077186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 9","termid":"PBO:0077186"}


id: PBO:0059926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 12","termid":"PBO:0059926"}


id: PBO:0066368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 11","termid":"PBO:0066368"}


id: PBO:0053642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 690","termid":"PBO:0053642"}


id: PBO:0051967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imatinib upregulated ABL suppressing lncRNA 1","termid":"PBO:0051967"}


id: PBO:0074422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 21","termid":"PBO:0074422"}


id: PBO:0031552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptidase_activity","termid":"PBO:0031552"}


id: GO:0072023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thick ascending limb over time, from its formation to the mature structure. The thick ascending limb is the last part of the loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thick ascending limb development","secondary_identifiers":["GO:0072026"],"synonyms":[{"name":"TAL development","type":"exact"}],"termid":"GO:0072023"}


id: FYPO:0003713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node","synonyms":[{"name":"abolished protein localisation to Skb1-containing cortical node","type":"exact"},{"name":"abolished protein localisation to lateral cortical node","type":"exact"},{"name":"abolished protein localization to lateral cortical node during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node during vegetative growth","type":"exact"},{"name":"protein absent from lateral cortical node","type":"related"},{"name":"protein localization to lateral cortical node abolished","type":"exact"}],"termid":"FYPO:0003713"}


id: PBO:0012216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-imports","termid":"PBO:0012216"}


id: PBO:0069949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1242, pseudogene","termid":"PBO:0069949"}


id: PBO:0085942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant sensitive to 6-azauracil (6AU) and mycophenolic acid (MPA)","termid":"PBO:0085942"}


id: PBO:0050244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 22","termid":"PBO:0050244"}


id: PBO:0061688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 160","termid":"PBO:0061688"}


id: GO:0031493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a histone that is assembled into a nucleosome.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosomal histone binding (obsolete GO:0031493)","termid":"GO:0031493"}


id: PBO:0089100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssz1","termid":"PBO:0089100"}


id: FYPO:0002390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle.","definition_xrefs":["GO:0007064","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic sister chromatid cohesion","synonyms":[{"name":"normal mitotic chromosome cohesion","type":"exact"},{"name":"normal mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal sister chromatid cohesion during mitosis","type":"exact"},{"name":"normal sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002390"}


id: GO:0003295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells that contributes to the reorganization of tissue resulting in the maturation of the atrial ventricular junction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"},{"relation_name":"part_of","term_name":"atrial ventricular junction remodeling","termid":"GO:0003294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in atrial ventricular junction remodeling","synonyms":[{"name":"cell proliferation involved in atrial ventricular junction remodelling","type":"exact"},{"name":"cell proliferation involved in atrio-ventricular junction remodeling","type":"exact"},{"name":"cell proliferation involved in atrio-ventricular junction remodelling","type":"exact"},{"name":"cell proliferation involved in atrioventricular junction remodeling","type":"exact"},{"name":"cell proliferation involved in atrioventricular junction remodelling","type":"exact"}],"termid":"GO:0003295"}


id: GO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of podosome assembly.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of podosome assembly","termid":"GO:0071801"}


id: GO:0043530
data:
  {"annotated_genes":["SJAG_01231"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109745],"is_not":false,"summary":null,"term":"GO:0043530"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 5'-monophosphoramidate + H2O = AMP + NH4+. Other substrates include AMP-morpholidate, AMP-N-alanine methyl ester and AMP-alpha-acetyl lysine methyl ester.","definition_xrefs":["PMID:11805111","RHEA:67916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"adenosine 5'-monophosphoramidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5' monophosphoramidase activity","type":"exact"},{"name":"adenosine 5'-monophosphoramidate hydrolase activity","type":"exact"}],"termid":"GO:0043530","terms_by_termid":{"GO:0043530":null}}


id: GO:0005323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete very-low-density lipoprotein (obsolete GO:0005323)","synonyms":[{"name":"VLDL","type":"exact"},{"name":"very-low-density lipoprotein","type":"exact"}],"termid":"GO:0005323"}


id: PBO:0005214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Rrp5 (predicted)","termid":"PBO:0005214"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: PBO:0017719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6, Gim1 (predicted)","termid":"PBO:0017719"}


id: PBO:0085310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase); an enzyme that catalyzes that conversion of CTP + phosphate into diphosphate + CDP-diaclglyerol, a critical step in the synthesis of all major yeast phospholipids; human homolog CDS1 can complement yeast cds1 null mutant","termid":"PBO:0085310"}


id: PBO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC vitamin D binding protein","termid":"PBO:0048448"}


id: PBO:0027227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_heme_binding","termid":"PBO:0027227"}


id: GO:1903487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactation.","definition_xrefs":["GOC:mr","PMID:19563620","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of lactation","termid":"GO:1903487"}


id: PBO:0065406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 2","termid":"PBO:0065406"}


id: PBO:0067757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 56","termid":"PBO:0067757"}


id: GO:0071737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgG immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of an IgG isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgG immunoglobulin complex","termid":"GO:0071735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"IgG B cell receptor complex","synonyms":[{"name":"membrane-bound IgG","type":"narrow"},{"name":"membrane-bound IgG1","type":"narrow"},{"name":"membrane-bound IgG2","type":"narrow"},{"name":"membrane-bound IgG2a","type":"narrow"},{"name":"membrane-bound IgG2b","type":"narrow"},{"name":"membrane-bound IgG2c","type":"narrow"},{"name":"membrane-bound IgG3","type":"narrow"},{"name":"membrane-bound IgG4","type":"narrow"},{"name":"surface IgG","type":"narrow"},{"name":"surface IgG1","type":"narrow"},{"name":"surface IgG2","type":"narrow"},{"name":"surface IgG2a","type":"narrow"},{"name":"surface IgG2b","type":"narrow"},{"name":"surface IgG2c","type":"narrow"},{"name":"surface IgG3","type":"narrow"},{"name":"surface IgG4","type":"narrow"}],"termid":"GO:0071737"}


id: GO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single-subunit-type mitochondrial RNA polymerase-specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single subunit type RNA polymerase activity","termid":"GO:0001064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0140098","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"mitochondrial single subunit type RNA polymerase activity","termid":"GO:0001065"}


id: FYPO:0006232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0006232"}


id: GO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth","termid":"GO:0001545"}


id: GO:0006782
data:
  {"annotated_genes":["SJAG_00097","SJAG_01372","SJAG_02876","SJAG_04109","SJAG_02896","SJAG_04944","SJAG_03961","SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67419,78300,86446,87779,89835,91154,91737,111985],"is_not":false,"summary":null,"term":"GO:0006782"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"protoporphyrinogen IX metabolic process","termid":"GO:0046501"},{"relation_name":"part_of","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01372":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"protoporphyrinogen IX biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"protoporphyrinogen IX anabolism","type":"exact"},{"name":"protoporphyrinogen IX biosynthesis","type":"exact"},{"name":"protoporphyrinogen IX formation","type":"exact"},{"name":"protoporphyrinogen IX synthesis","type":"exact"}],"termid":"GO:0006782","terms_by_termid":{"GO:0006782":null}}


id: PBO:0045439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L3 divergent transcript","termid":"PBO:0045439"}


id: GO:0099645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a neurotransmitter is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. postsynaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic specialization membrane","termid":"GO:0099633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor localization to postsynaptic specialization membrane","synonyms":[{"name":"neurotransmitter receptor localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099645"}


id: PBO:0091282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase, human DHRS7 family","termid":"PBO:0091282"}


id: GO:0047529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-2,3-dimethylmalate = propanoate + pyruvate.","definition_xrefs":["RHEA:10472","EC:4.1.3.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2,3-dimethylmalate lyase activity","secondary_identifiers":["KEGG_REACTION:R01355","MetaCyc:23-DIMETHYLMALATE-LYASE-RXN"],"synonyms":[{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase (propanoate-forming)","type":"related"},{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase activity","type":"related"},{"name":"2,3-dimethylmalate pyruvate-lyase activity","type":"related"}],"termid":"GO:0047529"}


id: GO:0102233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (cis)-crotonaldehyde + NADPH + H+ = butanal + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"crotonaldehyde redutase activity","secondary_identifiers":["MetaCyc:RXN-12292"],"termid":"GO:0102233"}


id: PBO:0066070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor gamma","termid":"PBO:0066070"}


id: GO:0046578
data:
  {"annotated_genes":["SJAG_02379","SJAG_04943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88268],"is_not":false,"summary":null,"term":"GO:0046578"},{"annotations":[71974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Ras protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Ras protein signal transduction","termid":"GO:0007265"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02379":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046578","terms_by_termid":{"GO:0046578":null,"GO:0046580":null}}


id: PBO:0086786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; analysis of HA-tagged protein suggests a membrane localization","termid":"PBO:0086786"}


id: GO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetylarylalkylamine = acetate + arylalkylamine.","definition_xrefs":["MetaCyc:3.5.1.76-RXN","EC:3.5.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"arylalkyl acylamidase activity","secondary_identifiers":["RHEA:10352"],"synonyms":[{"name":"N-acetylarylalkylamine amidohydrolase activity","type":"related"},{"name":"aralkyl acylamidase activity","type":"related"}],"termid":"GO:0047416"}


id: PBO:0068059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 364","termid":"PBO:0068059"}


id: GO:0006659
data:
  {"annotated_genes":["SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109733],"is_not":false,"summary":null,"term":"GO:0006659"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylserine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylserine anabolism","type":"exact"},{"name":"phosphatidylserine biosynthesis","type":"exact"},{"name":"phosphatidylserine formation","type":"exact"},{"name":"phosphatidylserine synthesis","type":"exact"}],"termid":"GO:0006659","terms_by_termid":{"GO:0006659":null}}


id: PBO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOA1 antisense RNA","termid":"PBO:0039710"}


id: PBO:0073300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 22","termid":"PBO:0073300"}


id: MOD:01740
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01740"}


id: PBO:0063538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudopodium enriched atypical kinase 1","termid":"PBO:0063538"}


id: PBO:0062160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 1","termid":"PBO:0062160"}


id: RO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_potential_to_develop_into","termid":"RO:0002387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_directly_develop_into","termid":"RO:0002388"}


id: PBO:0041266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 3","termid":"PBO:0041266"}


id: SO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_snoRNA_primary_transcript","synonyms":[{"name":"miR encoding snoRNA primary transcript","type":"exact"}],"termid":"SO:0002034"}


id: PBO:0066801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 100","termid":"PBO:0066801"}


id: PBO:0064704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 40","termid":"PBO:0064704"}


id: GO:0044821
data:
  {"annotated_genes":["SJAG_01263","SJAG_01777","SJAG_03680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109066],"is_not":false,"summary":null,"term":"GO:0044821"},{"annotations":[85268,101153],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery, as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere tethering at nuclear periphery","termid":"GO:0034398"},{"relation_name":"is_a","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_01777":null,"SJAG_03680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044821","terms_by_termid":{"GO:0044821":null,"GO:0070197":null}}


id: PBO:0089067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein, human IK ortholog, implicated in meiotic chromosome segregation in fission yeast, splicing or spindle checkpoint in human","termid":"PBO:0089067"}


id: PBO:0087610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates lysine 4 of histone H3 and is required in chromatin silencing at telomeres; contains a Dpy-30 domain that mediates interaction with Bre2p; similar to C. elegans and human DPY-30","termid":"PBO:0087610"}


id: GO:1902212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prolactin signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11773439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of prolactin signaling pathway","termid":"GO:1902211"},{"relation_name":"negatively_regulates","term_name":"prolactin signaling pathway","termid":"GO:0038161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prolactin signaling pathway","synonyms":[{"name":"down regulation of PRL signaling pathway","type":"exact"},{"name":"down regulation of prolactin signaling pathway","type":"exact"},{"name":"down regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of PRL signaling pathway","type":"exact"},{"name":"down-regulation of prolactin signaling pathway","type":"exact"},{"name":"down-regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"downregulation of PRL signaling pathway","type":"exact"},{"name":"downregulation of prolactin signaling pathway","type":"exact"},{"name":"downregulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"inhibition of PRL signaling pathway","type":"narrow"},{"name":"inhibition of prolactin signaling pathway","type":"narrow"},{"name":"inhibition of prolactin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of PRL signaling pathway","type":"exact"},{"name":"negative regulation of prolactin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902212"}


id: GO:0033439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"ACA codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033439"}


id: PBO:0041689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding and coiled-coil domain 2","termid":"PBO:0041689"}


id: SO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A C-terminus protein motif (CAAX) serving as a post-translational prenylation site modified by the attachment of either a farnesyl or a geranyl-geranyl group to a cysteine residue. Farnesyltransferase recognizes CaaX boxes where X = M, S, Q, A, or C, whereas Geranylgeranyltransferase I recognizes CaaX boxes with X = L or E.","direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"CAAX_box","synonyms":[{"name":"CAAX box","type":"exact"}],"termid":"SO:0002230"}


id: PBO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_unseptated_germ_tube_morphology","termid":"PBO:0031066"}


id: GO:0033258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving plastid DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"plastid DNA metabolic process","synonyms":[{"name":"plastid DNA metabolism","type":"exact"}],"termid":"GO:0033258"}


id: GO:1902216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17210636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"positively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"activation of IL-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902216"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: PBO:0029871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_methylation","termid":"PBO:0029871"}


id: GO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from rhoptry (obsolete GO:0085007)","termid":"GO:0085007"}


id: GO:1901791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:yaf","MetaCyc:1.13.11.16-RXN","MetaCyc:HCAMHPDEG-PWY","UniPathway:UPA00836","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","termid":"GO:1901790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate catabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate breakdown","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate catabolism","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate degradation","type":"exact"}],"termid":"GO:1901791"}


id: GO:0005550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odorant binding","termid":"GO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pheromone binding","termid":"GO:0005550"}


id: PBO:0004856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13a","termid":"PBO:0004856"}


id: PBO:0057490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 608","termid":"PBO:0057490"}


id: PBO:0091944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Knh2","termid":"PBO:0091944"}


id: GO:0052577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-germacrene D + diphosphate.","definition_xrefs":["EC:4.2.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"germacrene-D synthase activity","secondary_identifiers":["KEGG_REACTION:R07648","MetaCyc:RXN-8562","RHEA:12016"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase [(-)-Germacrene D-forming] activity","type":"related"}],"termid":"GO:0052577"}


id: GO:0010236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of plastoquinone, a lipid-soluble electron-transporting coenzyme present in the chloroplast.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"plastoquinone biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1581"],"synonyms":[{"name":"plastoquinone anabolism","type":"exact"},{"name":"plastoquinone biosynthesis","type":"exact"},{"name":"plastoquinone formation","type":"exact"},{"name":"plastoquinone synthesis","type":"exact"}],"termid":"GO:0010236"}


id: PBO:0070688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 59","termid":"PBO:0070688"}


id: GO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components, including (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate and diphthioceranate, to form the DIM/DIP layer of the Actinobacterium-type cell wall.","definition_xrefs":["GOC:mah","PMID:3149973","GOC:pr","PMID:15653820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Actinobacterium-type cell wall biogenesis","termid":"GO:0071766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"DIM/DIP cell wall layer assembly","synonyms":[{"name":"DIM cell wall layer assembly","type":"exact"},{"name":"DIM/DIP cell wall layer biogenesis","type":"related"},{"name":"PDIM cell wall layer assembly","type":"exact"}],"termid":"GO:0071770"}


id: GO:0034133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 1 signaling pathway","termid":"GO:0034131"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"positive regulation of TLR1 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034133"}


id: FYPO:0007956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the duration of microtubule growth events is abnormal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}


id: PBO:0067618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 790, pseudogene","termid":"PBO:0067618"}


id: GO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of male sex and sexual phenotypes in the hermaphroditic nematode soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"masculinization of hermaphrodite soma","termid":"GO:0042003"}


id: PBO:0055631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3070","termid":"PBO:0055631"}


id: PBO:0076927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFDP1 pseudogene 3","termid":"PBO:0076927"}


id: GO:0016972
data:
  {"annotated_genes":["SJAG_02827","SJAG_01647","SJAG_00196","SJAG_03992","SJAG_02489"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93825,105951,109840],"is_not":false,"summary":null,"term":"GO:0016972"},{"annotations":[70608,74966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + 2 H2O2.","definition_xrefs":["RHEA:17357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491","GO:0015036"],"is_obsolete":false,"name":"thiol oxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.3.2","UM-BBD_reactionID:r1293","MetaCyc:THIOL-OXIDASE-RXN"],"synonyms":[{"name":"sulfhydryl oxidase activity","type":"related"},{"name":"thiol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016972","terms_by_termid":{"GO:0016971":null,"GO:0016972":null}}


id: GO:1905522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage migration.","definition_xrefs":["GO_REF:0000058","PMID:25749876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"negatively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage migration","synonyms":[{"name":"down regulation of macrophage migration","type":"exact"},{"name":"down-regulation of macrophage migration","type":"exact"},{"name":"downregulation of macrophage migration","type":"exact"},{"name":"inhibition of macrophage migration","type":"narrow"}],"termid":"GO:1905522"}


id: GO:0045344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of MHC class I biosynthetic process","termid":"GO:0045343"},{"relation_name":"negatively_regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of MHC class I biosynthetic process","synonyms":[{"name":"down regulation of MHC class I biosynthetic process","type":"exact"},{"name":"down-regulation of MHC class I biosynthetic process","type":"exact"},{"name":"downregulation of MHC class I biosynthetic process","type":"exact"},{"name":"inhibition of MHC class I biosynthetic process","type":"narrow"},{"name":"negative regulation of MHC class I anabolism","type":"exact"},{"name":"negative regulation of MHC class I biosynthesis","type":"exact"},{"name":"negative regulation of MHC class I formation","type":"exact"},{"name":"negative regulation of MHC class I synthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045344"}


id: PBO:0055228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2654","termid":"PBO:0055228"}


id: GO:0005674
data:
  {"annotated_genes":["SJAG_00735","SJAG_04852","SJAG_00095"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69892,78671,110032],"is_not":false,"summary":null,"term":"GO:0005674"}]},"cv_name":"cellular_component","definition":"A general transcription initiation factor which in humans consists of a heterodimer of an alpha and a beta subunit. Helps recruit RNA polymerase II to the initiation complex and promotes translation elongation.","definition_xrefs":["PMID:7597077","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00735":null,"SJAG_04852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFIIF complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005674","terms_by_termid":{"GO:0005674":null}}


id: SO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primarily found in animals, the terminal inverted repeat (TIR) transposon superfamily piggyBac elements favour insertion adjacent to TTAA.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac_TIR_transposon","synonyms":[{"name":"DTB transposon","type":"exact"},{"name":"PiggyBac transposable element","type":"exact"},{"name":"piggyBac TIR transposon","type":"exact"}],"termid":"SO:0002283"}


id: FYPO:0002770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to spindle pole body","termid":"FYPO:0002769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to spindle pole body","synonyms":[{"name":"decreased protein localisation to spindle pole body","type":"exact"},{"name":"decreased protein localization to SPB","type":"exact"},{"name":"reduced protein localization to spindle pole body","type":"exact"}],"termid":"FYPO:0002770"}


id: PBO:0061182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 12-1","termid":"PBO:0061182"}


id: GO:0051967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, glutamatergic","synonyms":[{"name":"down regulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"down-regulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"downregulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"inhibition of synaptic transmission, glutamatergic","type":"narrow"}],"termid":"GO:0051967"}


id: FYPO:0005239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular tyrosine level","synonyms":[{"name":"increased cellular L-tyrosine level","type":"exact"},{"name":"increased cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular tyrosine level during vegetative growth","type":"exact"},{"name":"increased tyrosine accumulation","type":"related"}],"termid":"FYPO:0005239"}


id: PBO:0038403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-process_has_causal_agent","termid":"PBO:0038403"}


id: PBO:0085362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribomutase; catalyzes interconversion of ribose-1-phosphate and ribose-5-phosphate; has some phosphoglucomutase activity but primary activity in vivo is phosphoribomutase; contributes to ribose recycling in the pentose phosphate pathway; transcription induced in response to stress; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; non-essential","termid":"PBO:0085362"}


id: GO:0046882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonadotropin secretion","termid":"GO:0032277"},{"relation_name":"is_a","term_name":"regulation of follicle-stimulating hormone secretion","termid":"GO:0046880"},{"relation_name":"negatively_regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"down regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"down-regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"downregulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"inhibition of follicle-stimulating hormone secretion","type":"narrow"},{"name":"negative regulation of follicle stimulating hormone secretion","type":"exact"}],"termid":"GO:0046882"}


id: PBO:0056158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACROD2 antisense RNA 1","termid":"PBO:0056158"}


id: GO:0032222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"}


id: PBO:0050453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 1","termid":"PBO:0050453"}


id: PBO:0028608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_thiamine_starvation","termid":"PBO:0028608"}


id: PBO:0053855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1124","termid":"PBO:0053855"}


id: PBO:0073722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAIN motif family member 2","termid":"PBO:0073722"}


id: GO:0055064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of chloride ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion homeostasis","termid":"GO:0055081"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"chloride ion homeostasis","termid":"GO:0055064"}


id: GO:1901283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["UniPathway:UPA00065","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin metabolic process","termid":"GO:2001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydromethanopterin metabolic process","synonyms":[{"name":"5,6,7,8-tetrahydromethanopterin metabolism","type":"exact"}],"termid":"GO:1901283"}


id: GO:0035062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleoplasmic speckle distributed in the interchromatin space of cells in close proximity to chromatin. Omega speckles are distinct from interchromatin granules and contain heterogeneous nuclear RNA-binding proteins (hnRNPs).","definition_xrefs":["GOC:bf","PMID:10984439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear speck","termid":"GO:0016607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"omega speckle","termid":"GO:0035062"}


id: GO:0002860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002857"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"activation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"stimulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"up regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"up-regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"upregulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002860"}


id: PBO:0041545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 114","termid":"PBO:0041545"}


id: PBO:0063290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 4","termid":"PBO:0063290"}


id: FYPO:0006581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to fenpropimorph. Cells stop growing (and may die) at a concentration of fenpropimorph that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to fenpropimorph","synonyms":[{"name":"hypersensitive to fenpropimorph","type":"exact"},{"name":"sensitive to fenpropimorph during mitotic cell cycle","type":"related"},{"name":"sensitive to fenpropimorph during vegetative growth","type":"exact"}],"termid":"FYPO:0006581"}


id: PBO:0088491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin binding protein ortholog","termid":"PBO:0088491"}


id: GO:0031387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of a Cdc2-class (also known as Cdc28) cyclin-dependent kinase and an M-phase cyclin such as S. pombe Cdc13. The MPF complex phosphorylates and activates the anaphase promoting complex (APC).","definition_xrefs":["PMID:12045216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MPF complex","termid":"GO:0031387"}


id: GO:2000773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular senescence.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of cellular senescence","termid":"GO:2000772"},{"relation_name":"negatively_regulates","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular senescence","termid":"GO:2000773"}


id: GO:0047811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-alanine + L-glutamine = gamma-L-glutamyl-D-alanine + NH4.","definition_xrefs":["RHEA:23556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"D-alanine gamma-glutamyltransferase activity","secondary_identifiers":["EC:2.3.2.14","KEGG_REACTION:R01149","MetaCyc:D-ALANINE-GAMMA-GLUTAMYLTRANSFERASE-RXN"],"synonyms":[{"name":"D-alanine g-glutamyltransferase activity","type":"exact"}],"termid":"GO:0047811"}


id: PBO:0038400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-relation_between_physical_entity_and_a_process_or_stage","termid":"PBO:0038400"}


id: PBO:0054192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1567","termid":"PBO:0054192"}


id: GO:0120108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110705],"is_not":false,"summary":null,"term":"GO:0120108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (DNA)-3'-diphospho-5'-guanosine + H2O = (DNA)-3'-phosphate + GMP.","definition_xrefs":["RHEA:52140","PMID:26007660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"DNA-3'-diphospho-5'-guanosine diphosphatase","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.72"],"synonyms":[{"name":"DNA-3'pp5'G guanylate hydrolase","type":"exact"}],"termid":"GO:0120108","terms_by_termid":{"GO:0120108":null}}


id: PBO:0041466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 126","termid":"PBO:0041466"}


id: PBO:0075372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX9 antisense RNA 1","termid":"PBO:0075372"}


id: GO:1902653
data:
  {"annotated_genes":["SJAG_02104","SJAG_03598","SJAG_02719","SJAG_02982","SJAG_03929","SJAG_02044","SJAG_02855","SJAG_00453","SJAG_00158","SJAG_00770","SJAG_03750","SJAG_03509","SJAG_04059","SJAG_01474","SJAG_00717","SJAG_04049","SJAG_02068","SJAG_04217","SJAG_03249","SJAG_03235","SJAG_03715","SJAG_00370","SJAG_04499","SJAG_03024","SJAG_00580","SJAG_04865","SJAG_03531","SJAG_03018","SJAG_00624","SJAG_01307","SJAG_04018","SJAG_03349","SJAG_04790","SJAG_04810","SJAG_04270","SJAG_03352","SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84029,78490,78669,102719,85170,86944,70759,73681,102902,110275,75237,78314,90031,72626,113810,69969,75192,110125,111563,105220,103030,71387,104398,75220,84305,89843,98604,75970,73301,78492,99249,104632,94888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[89294],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[104995],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[74751],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[101041,84114],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary alcohol.","definition_xrefs":["GOC:TermGenie","PMID:11288200","GO_REF:0000068","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"secondary alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"secondary alcohol anabolism","type":"exact"},{"name":"secondary alcohol biosynthesis","type":"exact"},{"name":"secondary alcohol formation","type":"exact"},{"name":"secondary alcohol synthesis","type":"exact"}],"termid":"GO:1902653","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0087819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (40 kDa); involved in RNA polymerase II transcription initiation, similar to histone H3 with atypical histone fold motif of Spt3-like transcription factors","termid":"PBO:0087819"}


id: PBO:0067269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 343, pseudogene","termid":"PBO:0067269"}


id: PBO:0034399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_formation_of","termid":"PBO:0034399"}


id: PBO:0028721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint","termid":"PBO:0028721"}


id: GO:1903662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-altrarate.","definition_xrefs":["PMID:17649980","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-altrarate metabolic process","synonyms":[{"name":"L-altrarate(1-) metabolism","type":"exact"}],"termid":"GO:1903662"}


id: PBO:0043492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 1","termid":"PBO:0043492"}


id: PBO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog (predicted)","termid":"PBO:0004253"}


id: PBO:0080357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 12 pseudogene","termid":"PBO:0080357"}


id: GO:0030749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + loganate = S-adenosyl-L-homocysteine + loganin.","definition_xrefs":["EC:2.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"loganate O-methyltransferase activity","secondary_identifiers":["RHEA:12508","MetaCyc:LOGANATE-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:loganate 11-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:loganic acid methyltransferase activity","type":"related"},{"name":"loganate methyltransferase activity","type":"related"}],"termid":"GO:0030749"}


id: GO:0004617
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111917],"is_not":false,"summary":null,"term":"GO:0004617"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphoglycerate + NAD+ = 3-phosphohydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:12641","Reactome:R-HSA-977348","MetaCyc:PGLYCDEHYDROG-RXN"],"synonyms":[{"name":"3-phospho-D-glycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"3-phosphoglycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglyceric acid dehydrogenase activity","type":"related"},{"name":"3PHP reductase activity","type":"related"},{"name":"D- and L-HGA","type":"related"},{"name":"D-3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"D-3-phosphoglycerate:NAD+ oxidoreductase activity","type":"related"},{"name":"PGDH activity","type":"related"},{"name":"SerA","type":"related"},{"name":"SerA 3PG dehydrogenase activity","type":"related"},{"name":"alpha-KG reductase activity","type":"related"},{"name":"alpha-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"alphaKG reductase activity","type":"related"},{"name":"glycerate 3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerate-1,3-phosphate dehydrogenase activity","type":"related"},{"name":"phosphoglycerate oxidoreductase activity","type":"related"},{"name":"phosphoglyceric acid dehydrogenase activity","type":"related"}],"termid":"GO:0004617","terms_by_termid":{"GO:0004617":null}}


id: SO:1000016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a guanine to an adenine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_transition","termid":"SO:1000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_A_transition","synonyms":[{"name":"G to A transition","type":"exact"}],"termid":"SO:1000016"}


id: PBO:0034367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_in","termid":"PBO:0034367"}


id: PBO:0072651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 4","termid":"PBO:0072651"}


id: SO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL10 RNA leader sequence to the 5' end of an mRNA. SL10 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL10_acceptor_site","synonyms":[{"name":"SL10 acceptor site","type":"exact"}],"termid":"SO:0001755"}


id: GO:0005483
data:
  {"annotated_genes":["SJAG_04909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75276],"is_not":false,"summary":null,"term":"GO:0005483"}]},"cv_name":"molecular_function","definition":"Binding to both N-ethylmaleimide-sensitive fusion protein (NSF) and a cis-SNARE complex (i.e. a SNARE complex in which all proteins are associated with the same membrane) and increasing the ATPase activity of NSF, thereby allowing ATP hydrolysis by NSF to disassemble the cis-SNARE complex.","definition_xrefs":["PMID:14570579","PMID:15556857","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"soluble NSF attachment protein activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"SNAP","type":"exact"}],"termid":"GO:0005483","terms_by_termid":{"GO:0005483":null}}


id: GO:0019281
data:
  {"annotated_genes":["SJAG_03102"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98844],"is_not":false,"summary":null,"term":"GO:0019281"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including homoserine, via the intermediates O-succinyl-L-homoserine and cystathionine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process from L-homoserine via cystathionine","termid":"GO:0019279"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:MET-SAM-PWY"],"synonyms":[{"name":"L-methionine anabolism from homoserine via O-succinyl-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine formation from homoserine via O-succinyl-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from homoserine via O-succinyl-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0019281","terms_by_termid":{"GO:0019281":null}}


id: FYECO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with uracil as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, uracil nitrogen source","termid":"FYECO:0000276"}


id: PBO:0027982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_import_into_nucleus","termid":"PBO:0027982"}


id: PBO:0049670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 2","termid":"PBO:0049670"}


id: PBO:0075308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5","termid":"PBO:0075308"}


id: PBO:0075766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 5","termid":"PBO:0075766"}


id: GO:0047365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,3'-disulfate.","definition_xrefs":["EC:2.8.2.26","RHEA:22504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"quercetin-3-sulfate 3'-sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.26-RXN","KEGG_REACTION:R02632"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 3'-sulfotransferase activity","type":"related"},{"name":"3'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 3'-sulfotransferase activity","type":"related"},{"name":"flavonol 3'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 3'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047365"}


id: GO:0043710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, contributing to the formation of a biofilm composed of microorganisms of different species.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in biofilm formation","termid":"GO:0043708"},{"relation_name":"part_of","term_name":"multi-species biofilm formation","termid":"GO:0044399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in multi-species biofilm formation","synonyms":[{"name":"cell adhesion during multi-species biofilm formation","type":"related"}],"termid":"GO:0043710"}


id: PBO:0057859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3170","termid":"PBO:0057859"}


id: PBO:0039359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 1","termid":"PBO:0039359"}


id: PBO:0090625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external invertase, beta-fructofuranosidase Inv1","termid":"PBO:0090625"}


id: PATO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the lateral side","termid":"PATO:0002176"}


id: PBO:0088944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor Fhl1","termid":"PBO:0088944"}


id: SO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short open reading frame that is found in the 5' untranslated region of an mRNA and plays a role in translational regulation.","definition_xrefs":["PMID:16153175","PMID:12890013","POMBASE:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uORF","secondary_identifiers":["PMID:26684391"],"synonyms":[{"name":"regulatory uORF","type":"exact"},{"name":"upstream ORF","type":"exact"}],"termid":"SO:0002027"}


id: FYPO:0003930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during cellular response to salt stress","synonyms":[{"name":"decreased protein accumulation during cellular response to salt stress","type":"related"},{"name":"decreased protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003930"}


id: GO:0097272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of an internal steady state of ammonium.","definition_xrefs":["GOC:yaf","PMID:12695560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"ammonium homeostasis","synonyms":[{"name":"ammonia homeostasis","type":"exact"}],"termid":"GO:0097272"}


id: GO:0016835
data:
  {"annotated_genes":["SJAG_02293","SJAG_02988","SJAG_16460","SJAG_00432","SJAG_00337","SJAG_01574","SJAG_02369","SJAG_02972","SJAG_01372","SJAG_05283","SJAG_01300","SJAG_03588","SJAG_03485","SJAG_03124","SJAG_02689","SJAG_03669","SJAG_05007","SJAG_02107","SJAG_04404","SJAG_00592","SJAG_04107","SJAG_04098","SJAG_03213","SJAG_03243","SJAG_00305","SJAG_03724","SJAG_02106","SJAG_01630","SJAG_04843","SJAG_04674","SJAG_00461","SJAG_06611","SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004317"},{"annotations":[73804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019171"},{"annotations":[86572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003855"},{"annotations":[86573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003856"},{"annotations":[96114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003861"},{"annotations":[91255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051575"},{"annotations":[72620,73126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003994"},{"annotations":[76291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047453"},{"annotations":[76327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004089"},{"annotations":[72168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004107"},{"annotations":[91524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140078"},{"annotations":[71093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004160"},{"annotations":[77763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004333"},{"annotations":[73754,88541,88542,72234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019172"},{"annotations":[92043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004409"},{"annotations":[74744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004424"},{"annotations":[76986,78496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046570"},{"annotations":[105636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051009"},{"annotations":[100670,100669,100671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004634"},{"annotations":[71453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004655"},{"annotations":[76630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004664"},{"annotations":[78154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004730"},{"annotations":[75848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004795"},{"annotations":[78486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061503"},{"annotations":[72910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004834"},{"annotations":[73886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004852"},{"annotations":[101088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the breakage of a carbon-oxygen bond.","definition_xrefs":["EC:4.2.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00305":null,"SJAG_00337":null,"SJAG_00432":null,"SJAG_00461":null,"SJAG_00592":null,"SJAG_01300":null,"SJAG_01372":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_02084":null,"SJAG_02106":null,"SJAG_02107":null,"SJAG_02293":null,"SJAG_02369":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_02988":null,"SJAG_03124":null,"SJAG_03213":null,"SJAG_03243":null,"SJAG_03485":null,"SJAG_03588":null,"SJAG_03669":null,"SJAG_03724":null,"SJAG_04098":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04843":null,"SJAG_05007":null,"SJAG_05283":null,"SJAG_06611":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon-oxygen lyase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"other carbon-oxygen lyase activity","type":"narrow"}],"termid":"GO:0016835","terms_by_termid":{"GO:0003855":null,"GO:0003856":null,"GO:0003861":null,"GO:0003994":null,"GO:0004089":null,"GO:0004107":null,"GO:0004160":null,"GO:0004317":null,"GO:0004333":null,"GO:0004409":null,"GO:0004424":null,"GO:0004634":null,"GO:0004655":null,"GO:0004664":null,"GO:0004730":null,"GO:0004795":null,"GO:0004834":null,"GO:0004852":null,"GO:0019171":null,"GO:0019172":null,"GO:0046570":null,"GO:0047453":null,"GO:0051009":null,"GO:0051575":null,"GO:0061503":null,"GO:0102158":null,"GO:0140078":null}}


id: GO:0086002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a cardiac muscle cell and is involved in its contraction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}


id: PBO:0060759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 3","termid":"PBO:0060759"}


id: GO:0014029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest formation","termid":"GO:0014029"}


id: GO:0009745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of sucrose.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar mediated signaling pathway","termid":"GO:0010182"},{"relation_name":"part_of","term_name":"cellular response to sucrose stimulus","termid":"GO:0071329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sucrose mediated signaling","synonyms":[{"name":"sucrose mediated signalling","type":"exact"}],"termid":"GO:0009745"}


id: GO:0010658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations.","definition_xrefs":["GOC:tb","GOC:dph","CL:0000737","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell apoptotic process","synonyms":[{"name":"striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010658"}


id: GO:0046619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment and formation of the optic placode, paired ectodermal placodes that become invaginated to form the embryonic lens vesicles.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens placode formation","termid":"GO:0001743"},{"relation_name":"part_of","term_name":"embryonic camera-type eye formation","termid":"GO:0060900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens placode formation involved in camera-type eye formation","synonyms":[{"name":"optic placode formation in camera-type eye","type":"exact"},{"name":"optic placode formation involved in camera-style eye","type":"exact"},{"name":"optic placode formation involved in camera-type eye formation","type":"related"}],"termid":"GO:0046619"}


id: PBO:0038412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of,_positive_effect","termid":"PBO:0038412"}


id: PBO:0003987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Ppa2","termid":"PBO:0003987"}


id: GO:2001130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a trimethylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from trimethylamine","termid":"GO:2001130"}


id: PBO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFC related checkpoint protein Rad17","termid":"PBO:0002903"}


id: GO:0048854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).","definition_xrefs":["GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain morphogenesis","termid":"GO:0048854"}


id: PBO:0012011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial type I [2Fe-2S] ferredoxin Etp1/ cytochrome oxidase cofactor Cox15, fusion protein","termid":"PBO:0012011"}


id: PBO:0076531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 45","termid":"PBO:0076531"}


id: GO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + ADP + H+ + oxaloacetate + phosphate = ATP + citrate + CoA.","definition_xrefs":["RHEA:21160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ATP citrate synthase activity","secondary_identifiers":["MetaCyc:ATP-CITRATE-PRO-S--LYASE-RXN","EC:2.3.3.8","MetaCyc:PWY-5172","GO:0046913","KEGG_REACTION:R00352","Reactome:R-HSA-75848"],"synonyms":[{"name":"ATP citrate (pro-S)-lyase activity","type":"related"},{"name":"ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"ATP-citrate (pro-S-)-lyase activity","type":"related"},{"name":"ATP-citric lyase activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"related"},{"name":"adenosine triphosphate citrate lyase activity","type":"related"},{"name":"citrate cleavage enzyme activity","type":"related"},{"name":"citrate-ATP lyase activity","type":"related"},{"name":"citric cleavage enzyme activity","type":"related"}],"termid":"GO:0003878"}


id: PBO:0004014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WISH/DIP/SPIN90 ortholog Dip1","termid":"PBO:0004014"}


id: PBO:0109840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_allele_systematic_id","termid":"PBO:0109840"}


id: PBO:0071259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 4","termid":"PBO:0071259"}


id: PBO:0076459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAL bHLH transcription factor 2","termid":"PBO:0076459"}


id: PBO:0055545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2981","termid":"PBO:0055545"}


id: PBO:0044813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108B","termid":"PBO:0044813"}


id: PBO:0090683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer1 family protein","termid":"PBO:0090683"}


id: PBO:0017684
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FUS3","termid":"PBO:0017684"}


id: PBO:0059481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moesin pseudogene 1","termid":"PBO:0059481"}


id: PBO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 34","termid":"PBO:0071531"}


id: PBO:0054881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2295","termid":"PBO:0054881"}


id: FYECO:0000210
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glucose was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited glucose","termid":"FYECO:0000210"}


id: PBO:0064053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 87","termid":"PBO:0064053"}


id: GO:0048563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Morphogenesis, during the post-embryonic phase, of an animal tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete post-embryonic animal organ morphogenesis (obsolete GO:0048563)","termid":"GO:0048563"}


id: PBO:0074514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A6","termid":"PBO:0074514"}


id: FYPO:0003250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly begins earlier than normal, e.g. before metaphase is complete.","definition_xrefs":["PomBase:mah","PMID:23394829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"premature septum assembly","synonyms":[{"name":"advanced septum assembly","type":"exact"},{"name":"ectopic metaphase septum assembly","type":"related"},{"name":"premature division septum assembly","type":"exact"},{"name":"premature division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"premature septation","type":"broad"},{"name":"premature septum assembly during mitotic cell cycle","type":"related"},{"name":"premature septum assembly during vegetative growth","type":"exact"},{"name":"premature septum formation","type":"related"}],"termid":"FYPO:0003250"}


id: GO:0052340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (obsolete GO:0052340)","synonyms":[{"name":"catabolism by organism of cell wall cellulose in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052340"}


id: GO:0086077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from an AV node cell to a bundle of His cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling","synonyms":[{"name":"gap junction channel activity involved in atrioventricular node cell-bundle of His cell electrical coupling","type":"exact"}],"termid":"GO:0086077"}


id: PBO:0029406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NADPH-hemoprotein_reductase_activity","termid":"PBO:0029406"}


id: PBO:0004815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp20 (predicted)","termid":"PBO:0004815"}


id: PBO:0027160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_glucose_starvation","termid":"PBO:0027160"}


id: PBO:0058303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4677","termid":"PBO:0058303"}


id: GO:0016803
data:
  {"annotated_genes":["SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004301"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of an ether bond, -O-.","definition_xrefs":["EC:3.3.2.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ether bonds","termid":"GO:0016801"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ether hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8874435"],"termid":"GO:0016803","terms_by_termid":{"GO:0004301":null}}


id: GO:0008960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + membrane-derived-oligosaccharide D-glucose = 1,2-diacyl-sn-glycerol + membrane-derived-oligosaccharide 6-(glycerophospho)-D-glucose.","definition_xrefs":["EC:2.7.8.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphatidylglycerol-membrane-oligosaccharide glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:PGLYCEROLTRANSI-RXN"],"synonyms":[{"name":"oligosaccharide glycerophosphotransferase activity","type":"related"},{"name":"phosphatidylglycerol:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase activity","type":"related"},{"name":"phosphoglycerol transferase I","type":"related"},{"name":"phosphoglycerol transferase activity","type":"related"}],"termid":"GO:0008960"}


id: GO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"negatively_regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin biosynthetic process","synonyms":[{"name":"down regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"down-regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"downregulation of prostaglandin biosynthetic process","type":"exact"},{"name":"inhibition of prostaglandin biosynthetic process","type":"narrow"},{"name":"negative regulation of prostaglandin anabolism","type":"exact"},{"name":"negative regulation of prostaglandin biosynthesis","type":"exact"},{"name":"negative regulation of prostaglandin formation","type":"exact"},{"name":"negative regulation of prostaglandin synthesis","type":"exact"}],"termid":"GO:0031393"}


id: PBO:0079311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 5","termid":"PBO:0079311"}


id: PBO:0040730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-carotene oxygenase 2","termid":"PBO:0040730"}


id: GO:1902311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:21489137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of copper ion transmembrane transport","synonyms":[{"name":"regulation of copper cation transmembrane transport","type":"exact"},{"name":"regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902311"}


id: GO:1990629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found as a homopentamer of the phospholamban (PLN) protein in the sarcoplasmic reticulum (SR) membrane of cardiomyocytes. Cardiac PLN is a main determinant of muscle contraction and relaxation, by regulating intracellular calcium levels.","definition_xrefs":["GOC:ame","PMID:16043693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005789","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"phospholamban complex","synonyms":[{"name":"cardiac PLB complex","type":"related"},{"name":"cardiac PLN complex","type":"related"},{"name":"cardiac phospholamban complex","type":"exact"}],"termid":"GO:1990629"}


id: PR:Q09707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.09c gene.","definition_xrefs":["UniProtKB:Q09707","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyltransferase C18B11.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.09c","synonyms":[{"name":"Spom972h-SPAC18B11.09c","type":"exact"}],"termid":"PR:Q09707"}


id: PBO:0089687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 1","termid":"PBO:0089687"}


id: PR:O14022
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cta5 gene.","definition_xrefs":["UniProtKB:O14022","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation-transporting ATPase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.19c","synonyms":[{"name":"Spom972h-cta5","type":"exact"}],"termid":"PR:O14022"}


id: GO:1901397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transforming growth factor beta2 production","termid":"GO:0032915"},{"relation_name":"is_a","term_name":"positive regulation of transforming growth factor beta activation","termid":"GO:1901390"},{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta2 activation","termid":"GO:1901395"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta2 activation","termid":"GO:0036365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0023052"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta2 activation","synonyms":[{"name":"activation of TGF-beta 2 activation","type":"exact"},{"name":"activation of TGFB2 activation","type":"exact"},{"name":"activation of TGFbeta 2 activation","type":"exact"},{"name":"activation of transforming growth factor beta2 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 2 activation","type":"exact"},{"name":"positive regulation of TGFB2 activation","type":"exact"},{"name":"positive regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of TGF-beta 2 activation","type":"exact"},{"name":"up regulation of TGFB2 activation","type":"exact"},{"name":"up regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"up-regulation of TGF-beta 2 activation","type":"exact"},{"name":"up-regulation of TGFB2 activation","type":"exact"},{"name":"up-regulation of TGFbeta 2 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"upregulation of TGF-beta 2 activation","type":"exact"},{"name":"upregulation of TGFB2 activation","type":"exact"},{"name":"upregulation of TGFbeta 2 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta2 activation","type":"exact"}],"termid":"GO:1901397"}


id: GO:0016483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of the enzyme tryptophase hydroxylase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"tryptophan hydroxylase activator activity","termid":"GO:0016483"}


id: PBO:0064234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C like 1 (inactive)","termid":"PBO:0064234"}


id: GO:0071292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silver ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to silver ion","termid":"GO:0010272"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to silver ion","termid":"GO:0071292"}


id: GO:0005207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular matrix glycoprotein (obsolete GO:0005207)","synonyms":[{"name":"extracellular matrix glycoprotein","type":"exact"}],"termid":"GO:0005207"}


id: GO:0075280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"uredinium development","termid":"GO:0075279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uredinium development","termid":"GO:0075280"}


id: GO:0007167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"enzyme-linked receptor protein signaling pathway","synonyms":[{"name":"enzyme linked receptor protein signaling pathway","type":"exact"},{"name":"enzyme linked receptor protein signalling pathway","type":"exact"}],"termid":"GO:0007167"}


id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: GO:1900491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:pr","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900491"}


id: PBO:0087272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase involved in salt tolerance, nutrient response; functions in regulation of Trk1p-Trk2p potassium transporter; overexpression affects the Fe-S and lipoamide containing proteins in the mitochondrion; required for lipoylation of Lat1p, Kgd2p and Gcv3p; partially redundant with Hal5p; has similarity to Npr1p; localizes to the cytoplasm and mitochondrion","termid":"PBO:0087272"}


id: MOD:00837
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes four (2)H deuterium atoms for four (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium tetrasubstituted residue","synonyms":[{"name":"D(H)4Res","type":"exact"}],"termid":"MOD:00837"}


id: PBO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binding_phenotype","termid":"PBO:0030711"}


id: GO:0097230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus.","definition_xrefs":["PMID:21239624","GOC:pf","PMID:19363786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cellular response to potassium ion","termid":"GO:0035865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility in response to potassium ion","synonyms":[{"name":"K+ facilitation of cell motility","type":"exact"},{"name":"potassium ion facilitation of cell motility","type":"exact"}],"termid":"GO:0097230"}


id: PBO:0080417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 1","termid":"PBO:0080417"}


id: PBO:0074457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 2","termid":"PBO:0074457"}


id: PBO:0005873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine, mitochondrial","termid":"PBO:0005873"}


id: SO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a stem loop secondary structure in RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_sequence_secondary_structure","termid":"SO:0000122"},{"relation_name":"part_of","term_name":"stem_loop","termid":"SO:0000313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_loop_region","synonyms":[{"name":"stem loop region","type":"exact"}],"termid":"SO:0002253"}


id: MOD:00286
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["Unimod:424#C","RESID:AA0281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-cystein-S-yl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:00286"}


id: PR:Q6BDR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q6BDR8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.04c","synonyms":[{"name":"DNA repair protein rad62 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nse4","type":"exact"},{"name":"non-SMC element 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q6BDR8"}


id: GO:1900209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiolipin metabolic process","termid":"GO:1900208"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of cardiolipin metabolic process","synonyms":[{"name":"down regulation of cardiolipin metabolic process","type":"exact"},{"name":"down regulation of cardiolipin metabolism","type":"exact"},{"name":"down regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"down regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"down-regulation of cardiolipin metabolic process","type":"exact"},{"name":"down-regulation of cardiolipin metabolism","type":"exact"},{"name":"down-regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"down-regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"downregulation of cardiolipin metabolic process","type":"exact"},{"name":"downregulation of cardiolipin metabolism","type":"exact"},{"name":"downregulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"downregulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"inhibition of cardiolipin metabolic process","type":"narrow"},{"name":"inhibition of cardiolipin metabolism","type":"exact"},{"name":"inhibition of diphosphatidylglycerol metabolic process","type":"related"},{"name":"inhibition of diphosphatidylglycerol metabolism","type":"related"},{"name":"negative regulation of cardiolipin metabolism","type":"exact"},{"name":"negative regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"negative regulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900209"}


id: RO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_after","termid":"RO:0002086"}


id: PBO:0047080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM135A antisense RNA 1","termid":"PBO:0047080"}


id: PBO:0054290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1681","termid":"PBO:0054290"}


id: PBO:0045811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 1","termid":"PBO:0045811"}


id: MOD:01991
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycinium (protonated glycine) residue to an N,N,N-trimethylglycine.","definition_xrefs":["RESID:AA0619","PubMed:23818633","PubMed:23978223","ChEBI:17750"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated glycine (glycinium) residue","termid":"MOD:01990"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine (from glycinium)","synonyms":[{"name":"N2Me3Gly","type":"exact"}],"termid":"MOD:01991"}


id: PBO:0080826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAE1 divergent transcript","termid":"PBO:0080826"}


id: GO:0042306
data:
  {"annotated_genes":["SJAG_03048","SJAG_01311","SJAG_03453","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[89772,97648,86327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of movement of proteins from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"regulates","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01311":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of protein import into nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein import into cell nucleus","type":"exact"},{"name":"regulation of protein transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of protein-nucleus import","type":"exact"}],"termid":"GO:0042306","terms_by_termid":{"GO:0042307":null,"GO:0042308":null}}


id: PR:Q10358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RER1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02094","PANTHER:PTHR10743:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rer1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.05c","secondary_identifiers":["UniProtKB:Q10358"],"synonyms":[{"name":"Spom972h-RER1","type":"exact"},{"name":"retention of ER proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10358"}


id: PBO:0054401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1797","termid":"PBO:0054401"}


id: GO:0090460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of threonine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular threonine homeostasis","synonyms":[{"name":"cellular threonine homeostasis","type":"exact"},{"name":"threonine homeostasis","type":"exact"}],"termid":"GO:0090460"}


id: PBO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 5","termid":"PBO:0047714"}


id: PBO:0055354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2783","termid":"PBO:0055354"}


id: GO:0072501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular divalent inorganic anion homeostasis (obsolete GO:0072501)","termid":"GO:0072501"}


id: PBO:0053627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 671","termid":"PBO:0053627"}


id: PBO:0028915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heavy_metal_stress","termid":"PBO:0028915"}


id: GO:0097383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dIDP + H2O = dIMP + H+ + phosphate.","definition_xrefs":["RHEA:35211","GOC:pde","PMID:20385596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"dIDP phosphatase activity","secondary_identifiers":["Reactome:R-HSA-2509793"],"synonyms":[{"name":"deoxyinosine-diphosphatase activity","type":"related"}],"termid":"GO:0097383"}


id: PBO:0073748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 4","termid":"PBO:0073748"}


id: PBO:0083116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promotes release of MCM from Mcm10p, recruits elongation machinery; binds tightly to ssDNA, which disrupts interaction with the MCM helicase and stalls it during replication stress; mutants in human homolog may cause velocardiofacial and DiGeorge syndromes","termid":"PBO:0083116"}


id: GO:0042928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferrichrome is transported into the cell by specific cell surface receptors. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["ISBN:0198506732","PMID:23192658","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-hydroxamate import into cell","termid":"GO:0015687"},{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0098771","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ferrichrome import into cell","synonyms":[{"name":"ferrichrome transport","type":"broad"}],"termid":"GO:0042928"}


id: GO:0120039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a plasma membrane bounded cell projection are generated and organized.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"}


id: GO:0106033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of synapse occurring between an axon and a dendritic spine.","definition_xrefs":["PMID:15028757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric synapse","termid":"GO:0032279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine synapse","synonyms":[{"name":"dendritic spine synapse","type":"exact"}],"termid":"GO:0106033"}


id: PBO:0041051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 2","termid":"PBO:0041051"}


id: GO:0032020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition to a protein of ISG15, a ubiquitin-like protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"ISG15-protein conjugation","termid":"GO:0032020"}


id: GO:1904937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a sensory neuron from one site to another.","definition_xrefs":["GO_REF:0000091","GOC:TermGenie","GOC:ah","PMID:18622031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory neuron migration","termid":"GO:1904937"}


id: PATO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to be reduced to smaller pieces with little effort.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Friability"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"friability","termid":"PATO:0002405"}


id: PATO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000087 disease sensitivity (obsolete PATO:0000087)","termid":"PATO:0000087"}


id: PBO:0084733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inorganic pyrophosphatase; required for mitochondrial function and possibly involved in energy generation from inorganic pyrophosphate; human ortholog, PPA2, functionally complements the null mutant; mutations in human PPA2 cause a mitochondrial disease resulting in sudden unexpected cardiac arrest in infants","termid":"PBO:0084733"}


id: PR:Q9Y7Y8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- qrs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.02","synonyms":[{"name":"GlnRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qrs1","type":"exact"},{"name":"glutaminyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Y8"}


id: GO:1903463
data:
  {"annotated_genes":["SJAG_02074","SJAG_01068","SJAG_04671","SJAG_02162","SJAG_03048","SJAG_03695","SJAG_03160","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[97633,104055,93114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[107144,112262,98571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[97642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[94673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"regulates","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"regulation of mitotic cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903463","terms_by_termid":{"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null}}


id: FYPO:0001501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to brefeldin A. Cells stop growing (and may die) at a concentration of brefeldin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to brefeldin A","synonyms":[{"name":"hypersensitive to brefeldin A","type":"exact"},{"name":"sensitive to BFA","type":"exact"},{"name":"sensitive to brefeldin A during mitotic cell cycle","type":"related"},{"name":"sensitive to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0001501"}


id: PBO:0061283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 4","termid":"PBO:0061283"}


id: PBO:0039064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGK pseudogene 1","termid":"PBO:0039064"}


id: PBO:0044454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 33, pseudogene","termid":"PBO:0044454"}


id: GO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cytokine production that contributes to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002739","GO:0002742"],"synonyms":[{"name":"regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"regulation of cytokine production during immune response","type":"related"},{"name":"regulation of cytokine secretion involved in immune response","type":"narrow"}],"termid":"GO:0002718"}


id: PBO:0088732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb5","termid":"PBO:0088732"}


id: PBO:0062613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 1","termid":"PBO:0062613"}


id: PBO:0058578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6515","termid":"PBO:0058578"}


id: PATO:0000920
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000920 relative volume (obsolete PATO:0000920)","termid":"PATO:0000920"}


id: FYPO:0006106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at the central core of the centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished chromatin binding at centromere central core","synonyms":[{"name":"chromatin binding at centromere central core abolished","type":"exact"}],"termid":"FYPO:0006106"}


id: PR:P87150
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25H2.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit mic19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.09","synonyms":[{"name":"Spom972h-SPBC25H2.09","type":"exact"}],"termid":"PR:P87150"}


id: PBO:0036167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_during_vegetative_growth","termid":"PBO:0036167"}


id: PBO:0004593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAseP RNAse MRP subunit Pop7 (predicted)","termid":"PBO:0004593"}


id: PBO:0058809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7851","termid":"PBO:0058809"}


id: GO:0061281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the connecting tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of connecting tubule identity","termid":"GO:0072085"},{"relation_name":"part_of","term_name":"mesonephric connecting tubule development","termid":"GO:0061272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric connecting tubule identity","synonyms":[{"name":"specification of mesonephric collecting tubule identity","type":"exact"}],"termid":"GO:0061281"}


id: PBO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0000270"}


id: GO:1902346
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95928],"is_not":false,"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"Any meiotic strand displacement that is involved in double-strand break repair via synthesis-dependent strand annealing (SDSA).","definition_xrefs":["PMID:22723423","GOC:TermGenie","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand displacement","termid":"GO:0000714"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0007049","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"meiotic strand displacement involved in double-strand break repair via SDSA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic D-loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic strand displacement involved in SDSA","type":"broad"},{"name":"meiotic strand displacement involved in double-strand break repair via synthesis-dependent strand annealing","type":"exact"},{"name":"meiotic strand displacement involved in mitotic gene conversion","type":"related"}],"termid":"GO:1902346","terms_by_termid":{"GO:1902346":null}}


id: GO:0042437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"},{"relation_name":"is_a","term_name":"auxin catabolic process","termid":"GO:0009852"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"indoleacetic acid catabolic process","synonyms":[{"name":"IAA catabolic process","type":"exact"},{"name":"indole acetic acid catabolic process","type":"exact"},{"name":"indole acetic acid catabolism","type":"exact"},{"name":"indoleacetic acid breakdown","type":"exact"},{"name":"indoleacetic acid catabolism","type":"exact"},{"name":"indoleacetic acid degradation","type":"exact"}],"termid":"GO:0042437"}


id: PR:O94428
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug168 gene.","definition_xrefs":["UniProtKB:O94428","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 168 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.09","synonyms":[{"name":"Spom972h-mug168","type":"exact"}],"termid":"PR:O94428"}


id: PBO:0038627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical chemokine receptor 3","termid":"PBO:0038627"}


id: GO:0021730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trigeminal sensory nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal sensory nucleus development","termid":"GO:0021730"}


id: PBO:0046612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K13 member 1","termid":"PBO:0046612"}


id: PBO:0068008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 310","termid":"PBO:0068008"}


id: PBO:0005265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1 (predicted)","termid":"PBO:0005265"}


id: FYPO:0001283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to nitrogen starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to nitrogen starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to nitrogen starvation","type":"related"},{"name":"decreased protein level during cellular response to nitrogen depletion","type":"exact"},{"name":"decreased protein level during cellular response to nitrogen deprivation","type":"exact"},{"name":"decreased protein level during nitrogen starvation","type":"exact"},{"name":"reduced protein level during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0001283"}


id: PR:000027613
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 phosphorylated 2 in Schizosaccharomyces pombe. Phosphorylated by Rad3 and Tel1. UniProtKB:Q9P7T4-1, Ser-604, MOD:00046.","definition_xrefs":["PMID:14585996","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mrc1/Phos:(S604)","pombase_gene_id":"SPAC694.06c","synonyms":[{"name":"Spom-mrc1/Phos:2","type":"exact"},{"name":"mrc1/Phos:(S604)","type":"exact"}],"termid":"PR:000027613"}


id: PBO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 5","termid":"PBO:0050743"}


id: PBO:0056947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 15a","termid":"PBO:0056947"}


id: PR:000027576
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed phosphorylated form that has been phosphorylated by Haspin in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/InitMet-/Phos:(T3)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"Spom-hht1/InitMet-/Phos:1","type":"exact"},{"name":"hht1/InitMet-/Phos:(T3)","type":"exact"},{"name":"hht1/InitMet-/Phos:(T4)","type":"exact"}],"termid":"PR:000027576"}


id: PBO:0086910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative X-Pro aminopeptidase; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YFR006W is not an essential gene","termid":"PBO:0086910"}


id: PBO:0060357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOCD antisense RNA 1","termid":"PBO:0060357"}


id: SO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature are decreased relative to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_change","termid":"SO:0001563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_decrease","synonyms":[{"name":"copy number decrease","type":"exact"}],"termid":"SO:0001912"}


id: GO:0002689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte chemotaxis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"negatively_regulates","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte chemotaxis","synonyms":[{"name":"down regulation of leukocyte chemotaxis","type":"exact"},{"name":"down-regulation of leukocyte chemotaxis","type":"exact"},{"name":"downregulation of leukocyte chemotaxis","type":"exact"},{"name":"inhibition of leukocyte chemotaxis","type":"narrow"},{"name":"negative regulation of immune cell chemotaxis","type":"exact"},{"name":"negative regulation of leucocyte chemotaxis","type":"exact"}],"termid":"GO:0002689"}


id: PBO:0038580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1 pseudogene 1","termid":"PBO:0038580"}


id: PBO:0088112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often used as a marker protein in studies of autophagy and cytosol to vacuole targeting (CVT) pathway; protein increases in abundance and relative distribution to cytoplasmic foci increases upon DNA replication stress","termid":"PBO:0088112"}


id: GO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding to single-stranded telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-stranded telomeric DNA binding","synonyms":[{"name":"regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060380"}


id: GO:1904746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in development.","definition_xrefs":["PMID:22801495","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in development","termid":"GO:1902742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in development","synonyms":[{"name":"down regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"down regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"down regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic process involved in development","type":"exact"},{"name":"down regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"down regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"down regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"down regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"down regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"down regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"down regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"down regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"down regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"down-regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic process involved in development","type":"exact"},{"name":"down-regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"down-regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"down-regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"down-regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"down-regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"down-regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"downregulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"downregulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"downregulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic process involved in development","type":"exact"},{"name":"downregulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"downregulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"downregulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"downregulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"downregulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"downregulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"downregulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"downregulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"downregulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"downregulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"downregulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"inhibition of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"inhibition of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic process involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic process involved in development","type":"narrow"},{"name":"inhibition of apoptotic process involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"inhibition of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"inhibition of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"inhibition of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"inhibition of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"inhibition of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"inhibition of programmed cell death by apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of programmed cell death by apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"inhibition of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"inhibition of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"negative regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"negative regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"negative regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"negative regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"negative regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"negative regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1904746"}


id: PBO:0030515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_camptothecin","termid":"PBO:0030515"}


id: PBO:0055730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 4","termid":"PBO:0055730"}


id: PBO:0027605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_spindle_assembly","termid":"PBO:0027605"}


id: PBO:0063411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 7","termid":"PBO:0063411"}


id: PBO:0062564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AD member 1","termid":"PBO:0062564"}


id: RO:0002469
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides_nutrients_for","termid":"RO:0002469"}


id: GO:0033891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage to give 5'-phosphooligonucleotide end-products, with a preference for cleavage within the sequence CC.","definition_xrefs":["EC:3.1.21.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140097","GO:0016788"],"is_obsolete":false,"name":"CC-preferring endodeoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.6-RXN"],"synonyms":[{"name":"5'-CC-3'-preferring endodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic dodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic endodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic endonuclease activity","type":"related"}],"termid":"GO:0033891"}


id: PBO:0034645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0034645"}


id: PBO:0069676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 953, pseudogene","termid":"PBO:0069676"}


id: PBO:0043348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colipase like 1","termid":"PBO:0043348"}


id: PBO:0051344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-26","termid":"PBO:0051344"}


id: PBO:0077318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 53","termid":"PBO:0077318"}


id: FYPO:0006329
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[114196,114197,114200,114198],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which organelle localization, i.e. any process in which an organelle is transported to, and/or maintained in, a specific location, is abnormal.","definition_xrefs":["GO:0051640","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal organelle localization","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892","SJAG_01834","SJAG_03449"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","vps4delta","man1delta","pom152delta"],"synonyms":[{"name":"abnormal organelle localisation","type":"exact"},{"name":"abnormal organelle localization during mitotic cell cycle","type":"related"},{"name":"abnormal organelle localization during vegetative growth","type":"exact"}],"termid":"FYPO:0006329","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0062684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 5 pseudogene","termid":"PBO:0062684"}


id: PBO:0034704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1","termid":"PBO:0034704"}


id: GO:0010146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructan a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"fructan metabolic process","termid":"GO:0010145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"fructan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-822"],"synonyms":[{"name":"fructan anabolism","type":"exact"},{"name":"fructan biosynthesis","type":"exact"},{"name":"fructan formation","type":"exact"},{"name":"fructan synthesis","type":"exact"},{"name":"levan biosynthesis","type":"exact"},{"name":"levan biosynthetic process","type":"exact"}],"termid":"GO:0010146"}


id: GO:0060004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An automatic response to a stimulus beginning with a nerve impulse from a receptor and ending with the action of an effector such as a gland or a muscle. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:dph","ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reflex","secondary_identifiers":["Wikipedia:Reflex"],"termid":"GO:0060004"}


id: PBO:0085936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0085936"}


id: PBO:0090959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Loc1","termid":"PBO:0090959"}


id: PBO:0062124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 2","termid":"PBO:0062124"}


id: PR:P87313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malignant T cell-amplified sequence 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03852","PRO:DNx","PANTHER:PTHR22798:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.12","secondary_identifiers":["UniProtKB:P87313"],"synonyms":[{"name":"Spom972h-MCTS1","type":"exact"}],"termid":"PR:P87313"}


id: PBO:0044513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYYR1 antisense RNA 1","termid":"PBO:0044513"}


id: PBO:0063205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 1","termid":"PBO:0063205"}


id: MOD:01310
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent light form group.","definition_xrefs":["Unimod:60#K","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent light form N6-L-lysine","synonyms":[{"name":"GIST-Quat","type":"related"},{"name":"Quaternary amine labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:01310"}


id: GO:0003697
data:
  {"annotated_genes":["SJAG_05214","SJAG_00939","SJAG_04995","SJAG_01354","SJAG_04933","SJAG_05239","SJAG_02667","SJAG_02503","SJAG_00399","SJAG_03722","SJAG_00768","SJAG_03495","SJAG_03832","SJAG_04245","SJAG_04863","SJAG_02556","SJAG_04530","SJAG_00857","SJAG_03436","SJAG_04410","SJAG_03855","SJAG_00757","SJAG_01049","SJAG_02348","SJAG_02267","SJAG_02079","SJAG_00619","SJAG_03682","SJAG_01677","SJAG_02362","SJAG_01762","SJAG_01436","SJAG_02194","SJAG_00984","SJAG_03886","SJAG_03957","SJAG_02031","SJAG_00796","SJAG_04210","SJAG_03068","SJAG_01076","SJAG_01887","SJAG_01410","SJAG_00884","SJAG_04574","SJAG_03161","SJAG_00871","SJAG_02627","SJAG_00819","SJAG_04156","SJAG_02545","SJAG_01771","SJAG_02822","SJAG_01698","SJAG_01708","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69929,69992,70838,71713,71872,71883,72142,72297,72730,72953,73859,74032,74088,74283,74389,74795,76295,76849,85221,85312,91128,91554,91612,92785,96792,97462,98218,100175,100542,102863,103730,104251,105625,106592,107160,107518,108650,109709,110549,110711,111287,111552,111825,113145],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[98431,108474,110943,107624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[75714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[109669,84707,91442,103304,106643,105500,106667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA.","definition_xrefs":["GOC:vw","PMID:22976174","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00399":null,"SJAG_00619":null,"SJAG_00757":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00819":null,"SJAG_00857":null,"SJAG_00871":null,"SJAG_00884":null,"SJAG_00939":null,"SJAG_00984":null,"SJAG_01049":null,"SJAG_01076":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01436":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01771":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02079":null,"SJAG_02194":null,"SJAG_02267":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02503":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02822":null,"SJAG_03068":null,"SJAG_03161":null,"SJAG_03436":null,"SJAG_03495":null,"SJAG_03682":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03832":null,"SJAG_03855":null,"SJAG_03886":null,"SJAG_03957":null,"SJAG_04156":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04410":null,"SJAG_04530":null,"SJAG_04574":null,"SJAG_04863":null,"SJAG_04933":null,"SJAG_04995":null,"SJAG_05214":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"single-stranded DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003699","GO:0003698"],"synonyms":[{"name":"ssDNA binding","type":"exact"}],"termid":"GO:0003697","terms_by_termid":{"GO:0003697":null,"GO:0043047":null,"GO:0098505":null,"GO:1990814":null}}


id: PBO:0071691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 23","termid":"PBO:0071691"}


id: PBO:0030409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell_during_vegetative_growth","termid":"PBO:0030409"}


id: FYPO:0003363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cytogamy does not occur. Cytogamy is the process that creates a single cell from two cells of complementary mating types.","definition_xrefs":["GO:0000755","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"abolished cytogamy","synonyms":[{"name":"conjugation without cellular fusion during mating","type":"related"},{"name":"cytogamy abolished","type":"exact"}],"termid":"FYPO:0003363"}


id: PBO:0003684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation protein Uds1","termid":"PBO:0003684"}


id: PBO:0073024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2D1 antisense RNA 1","termid":"PBO:0073024"}


id: FYPO:0001647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of L-glutamate into the cell is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import","termid":"FYPO:0001646"},{"relation_name":"is_a","term_name":"abnormal amino acid import during nitrogen starvation","termid":"FYPO:0001648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glutamate import during nitrogen starvation","synonyms":[{"name":"abnormal L-glutamate import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"abnormal L-glutamate import during nitrogen starvation","type":"exact"},{"name":"abnormal glutamate import during nitrogen depletion","type":"exact"},{"name":"abnormal glutamate import during nitrogen deprivation","type":"exact"},{"name":"abnormal glutamate import into cell during nitrogen starvation","type":"exact"},{"name":"abnormal glutamate uptake during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001647"}


id: GO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y6 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"P2Y6 nucleotide receptor binding","synonyms":[{"name":"P2Y6 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031816"}


id: PR:O14243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.12","secondary_identifiers":["UniProtKB:O14243"],"synonyms":[{"name":"Spom972h-SNX30","type":"exact"},{"name":"autophagy-related protein 24 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14243"}


id: PBO:0080866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 7","termid":"PBO:0080866"}


id: PBO:0061157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NmrA like redox sensor 2, pseudogene","termid":"PBO:0061157"}


id: GO:0062146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chloro-L-lysine + AH2 + O2 = A + formaldehyde + H2O + L-2-amino-4-chloropent-4-enoate + NH4(+).","definition_xrefs":["PMID:30867596","RHEA:59888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-chloro-allylglycine synthase activity","termid":"GO:0062146"}


id: GO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell adhesion molecule ICAM-4.","definition_xrefs":["PMID:12477717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-ICAM-4 complex","synonyms":[{"name":"ITGAIIb-ITGB3-ICAM4 complex","type":"narrow"}],"termid":"GO:0071113"}


id: PBO:0054312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1704","termid":"PBO:0054312"}


id: GO:0033619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic cleavage of a transmembrane protein leading to the release of its intracellular or ecto-domains.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane protein proteolysis","termid":"GO:0033619"}


id: GO:0022900
data:
  {"annotated_genes":["SJAG_00601","SJAG_01190","SJAG_00976","SJAG_01490","SJAG_02646","SJAG_02744","SJAG_07007","SJAG_00260","SJAG_MIT20","SJAG_04152","SJAG_00080","SJAG_MIT03","SJAG_01671","SJAG_02504","SJAG_07006","SJAG_04397","SJAG_01077","SJAG_MIT13","SJAG_03920","SJAG_02398","SJAG_MIT04","SJAG_01763","SJAG_03337","SJAG_01355","SJAG_05629","SJAG_00755","SJAG_03490","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91923],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043490"},{"annotations":[73501,84748,71697,113979,103458,109295,114002,109713,75031,110482,83759,113959],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[107945],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[111768,84710,84351,108281],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[85478,108484,110147,74703,75030,112665,113983,113118,99333,103143],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006122"},{"annotations":[88605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140647"}]},"cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors.","definition_xrefs":["GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00522":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_04152":null,"SJAG_04397":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"electron transport chain","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Electron_transport_chain"],"termid":"GO:0022900","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0043490":null,"GO:0140647":null}}


id: GO:0102406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sinapoyl-CoA + 16-hydroxypalmitate = coenzyme A + 16-sinapoyloxypalmitate.","definition_xrefs":["GOC:pz","EC:2.3.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"omega-hydroxypalmitate O-sinapoyl transferase activity","secondary_identifiers":["MetaCyc:RXN-13728","RHEA:26470"],"termid":"GO:0102406"}


id: PBO:0062462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 149 pseudogene","termid":"PBO:0062462"}


id: GO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of male genitalia are generated and organized from the genital imaginal disc.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived genitalia morphogenesis","termid":"GO:0048805"},{"relation_name":"is_a","term_name":"male genitalia morphogenesis","termid":"GO:0048808"},{"relation_name":"part_of","term_name":"imaginal disc-derived male genitalia development","termid":"GO:0007485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived male genitalia morphogenesis","synonyms":[{"name":"male genital morphogenesis","type":"broad"}],"termid":"GO:0048803"}


id: PBO:0070664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 35","termid":"PBO:0070664"}


id: PBO:0077809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 regulated apoptosis inducing protein 1","termid":"PBO:0077809"}


id: FYECO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing peptone, yeast extract and other components. The concentration of glucose is typically around 2-3%. Note that peptone, which is a mixture of nutrients generated by proteolytic digestion of animal protein with trypsin, is not normally a component of S. pombe rich media (it is however normally present in S. cerevisiae rich media).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPD","synonyms":[{"name":"glucose rich medium, peptone/YE nitrogen source","type":"broad"}],"termid":"FYECO:0000201"}


id: PR:O42935
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3201 gene.","definition_xrefs":["UniProtKB:O42935","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.11","synonyms":[{"name":"Spom972h-rpl3201","type":"exact"}],"termid":"PR:O42935"}


id: PR:Q9USS7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec24D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.03c","secondary_identifiers":["UniProtKB:Q9USS7"],"synonyms":[{"name":"Spom972h-SEC24D","type":"exact"}],"termid":"PR:Q9USS7"}


id: GO:0003408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the optic cup, a two-walled vesicle formed from the optic vesicle.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup formation involved in camera-type eye development","termid":"GO:0003408"}


id: PBO:0091199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys","termid":"PBO:0091199"}


id: GO:0030227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with apolipoprotein E to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor activity (obsolete GO:0030227)","synonyms":[{"name":"ApoE receptor","type":"exact"},{"name":"apolipoprotein E receptor activity","type":"exact"}],"termid":"GO:0030227"}


id: GO:0102104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-coumaroyl)acetyl-CoA + feruloyl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"demethoxycurcumin synthase activity","secondary_identifiers":["MetaCyc:RXN-11224"],"termid":"GO:0102104"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0140096","GO:0004672","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: PBO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 1","termid":"PBO:0046359"}


id: GO:0052825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,5,6-pentakisphosphate + H2O = inositol-3,4,5,6-tetrakisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate phosphatase activity","termid":"GO:0052827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate 1-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855219"],"termid":"GO:0052825"}


id: GO:0061436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the epithelial barrier, the functional barrier in the skin that limits its permeability.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of skin barrier","synonyms":[{"name":"epithelial barrier development","type":"related"},{"name":"establishment of epithelial barrier","type":"broad"},{"name":"skin barrier development","type":"related"}],"termid":"GO:0061436"}


id: PBO:0059076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 2","termid":"PBO:0059076"}


id: PBO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.48","termid":"PBO:0000910"}


id: GO:0043667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The wall surrounding a mature pollen grain; a multilayered structure consisting of a pectocellulosic intine surrounded by a sporopollenin-based exine, which itself contains two layers, the inner nexine and the outer sexine.","definition_xrefs":["GOC:fz","PMID:15131249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen wall","synonyms":[{"name":"microspore wall","type":"exact"}],"termid":"GO:0043667"}


id: PR:Q9Y818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 G1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03741","PANTHER:PTHR24067:SF36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.09","secondary_identifiers":["UniProtKB:Q9Y818"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2G1","type":"exact"},{"name":"ubiquitin carrier protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y818"}


id: PBO:0089055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Adn2","termid":"PBO:0089055"}


id: PATO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000295 relative activity value (obsolete PATO:0000295)","termid":"PATO:0000295"}


id: PBO:0082622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; involved in transcriptional repression and activation of diverse processes, including mating-type switching and meiosis; involved in the maintenance of chromosomal integrity","termid":"PBO:0082622"}


id: GO:0005951
data:
  {"annotated_genes":["SJAG_00412","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70192,101712],"is_not":false,"summary":null,"term":"GO:0005951"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.","definition_xrefs":["PMID:8626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine-specific carbamoyl phosphate synthetase complex","type":"narrow"},{"name":"carbamoyl phosphate synthase complex","type":"exact"},{"name":"carbamoyl-phosphate synthase arginine-specific complex","type":"narrow"}],"termid":"GO:0005951","terms_by_termid":{"GO:0005951":null}}


id: PBO:0030766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mitomycin_C","termid":"PBO:0030766"}


id: SO:1000086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a decrease in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000086 sequence_variation_decreasing_level_of_transcript (obsolete SO:1000086)","synonyms":[{"name":"mutation decreasing level of transcript","type":"exact"},{"name":"sequence variation decreasing level of transcript","type":"related"}],"termid":"SO:1000086"}


id: GO:0010771
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"negatively_regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010771","terms_by_termid":{"GO:0051517":null}}


id: GO:0008409
data:
  {"annotated_genes":["SJAG_03276","SJAG_04410","SJAG_01832","SJAG_01173","SJAG_03994","SJAG_05280","SJAG_03734","SJAG_01648","SJAG_02275"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76950,88416],"is_not":false,"summary":null,"term":"GO:0008409"},{"annotations":[83952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[73093,76574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[110704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[102949,92487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[72466,92489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_02275":null,"SJAG_03276":null,"SJAG_03734":null,"SJAG_03994":null,"SJAG_04410":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004527","GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"5'-3' exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5358619","Reactome:R-HSA-5358599"],"termid":"GO:0008409","terms_by_termid":{"GO:0004534":null,"GO:0008409":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null}}


id: PBO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 35","termid":"PBO:0052522"}


id: GO:0061139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of a bud primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud field specification","termid":"GO:0061139"}


id: FYPO:0002212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that is curved along the long axis, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated, curved germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated, curved cell","type":"exact"},{"name":"inviable following spore germination with elongated, curved germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, curved germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated, curved germ tube","type":"exact"}],"termid":"FYPO:0002212"}


id: PBO:0039906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF7 antisense RNA 1","termid":"PBO:0039906"}


id: PBO:0064738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 74","termid":"PBO:0064738"}


id: PBO:0082397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of heterooctameric phosphofructokinase; involved in glycolysis; indispensable for anaerobic growth; activated by fructose-2,6-bisphosphate and AMP; mutation inhibits glucose induction of cell cycle-related genes","termid":"PBO:0082397"}


id: PBO:0078452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5","termid":"PBO:0078452"}


id: GO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of thymocyte death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte apoptotic process","synonyms":[{"name":"regulation of immature T cell apoptosis","type":"related"},{"name":"regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070243"}


id: RO:HOM0000034
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes when duplications more recent than the species split have occurred in one species but not the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_1_to_many_homology_relationship_with","termid":"RO:HOM0000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_orthology_relationship_with","synonyms":[{"name":"1 to many orthologous to","type":"exact"},{"name":"1:many orthology","type":"exact"},{"name":"co-orthology","type":"related"},{"name":"many to 1 orthology","type":"related"},{"name":"one-to-many orthology","type":"exact"}],"termid":"RO:HOM0000034"}


id: PBO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, unknown specificity","termid":"PBO:0002982"}


id: PBO:0078031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 21","termid":"PBO:0078031"}


id: PBO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase Ggt1","termid":"PBO:0001142"}


id: GO:0050421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitric oxide + H2O + ferricytochrome c = nitrite + ferrocytochrome c + 2 H+.","definition_xrefs":["MetaCyc:NITRITE-REDUCTASE-CYTOCHROME-RXN","EC:1.7.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrite reductase (NO-forming) activity","secondary_identifiers":["RHEA:15233","GO:0016666"],"synonyms":[{"name":"NO-forming nitrite reductase (cytochrome) activity","type":"exact"},{"name":"NO-forming nitrite reductase activity","type":"exact"},{"name":"[nitrite reductase (cytochrome)]","type":"related"},{"name":"cd-cytochrome nitrite reductase activity","type":"narrow"},{"name":"cytochrome c-551:O2, NO2(+) oxidoreductase activity","type":"related"},{"name":"cytochrome c-551:O2, NO2+ oxidoreductase activity","type":"related"},{"name":"cytochrome cd activity","type":"narrow"},{"name":"cytochrome cd1 activity","type":"narrow"},{"name":"methyl viologen-nitrite reductase activity","type":"narrow"},{"name":"nitric-oxide:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"nitrite reductase (cytochrome; NO-forming) activity","type":"related"}],"termid":"GO:0050421"}


id: GO:0044211
data:
  {"annotated_genes":["SJAG_03708","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88385,109968],"is_not":false,"summary":null,"term":"GO:0044211"}]},"cv_name":"biological_process","definition":"Any process which produces cytidine 5'-triphosphate (CTP) from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:10501935","GOC:jl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CTP biosynthetic process","termid":"GO:0006241"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide salvage","termid":"GO:0010138"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"CTP salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CTP biosynthetic process via salvage pathway","type":"exact"},{"name":"cytidine 5'-triphosphate salvage","type":"exact"}],"termid":"GO:0044211","terms_by_termid":{"GO:0044211":null}}


id: PBO:0072326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 12","termid":"PBO:0072326"}


id: PBO:0004913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein (predicted)","termid":"PBO:0004913"}


id: PBO:0067008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 15, pseudogene","termid":"PBO:0067008"}


id: FYPO:0002094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion","synonyms":[{"name":"normal sister chromatid cohesion during meiosis","type":"exact"}],"termid":"FYPO:0002094"}


id: GO:0035158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that a tube in an open tracheal system is of the correct diameter. When primary branches form their lumens are small (less than 2 micrometers) in caliber and must undergo regulated expansion during larval life to reach their mature size.","definition_xrefs":["PMID:14570584","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size, open tracheal system","termid":"GO:0035151"},{"relation_name":"is_a","term_name":"regulation of tube diameter","termid":"GO:0035296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube diameter, open tracheal system","synonyms":[{"name":"tracheal tube expansion","type":"narrow"},{"name":"regulation of tracheal tube diameter","type":"exact"},{"name":"tracheal tube dilation","type":"narrow"}],"termid":"GO:0035158"}


id: PBO:0060733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFAF2 pseudogene 2","termid":"PBO:0060733"}


id: PR:O43060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10540:SF6","PRO:DNx","OMA:SCHPO03575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.07","secondary_identifiers":["UniProtKB:O43060"],"synonyms":[{"name":"Spom972h-EIF3F","type":"exact"},{"name":"eIF3f (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43060"}


id: GO:0004073
data:
  {"annotated_genes":["SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74953],"is_not":false,"summary":null,"term":"GO:0004073"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate 4-semialdehyde + NADP+ + phosphate = 4-phospho-L-aspartate + H+ + NADPH.","definition_xrefs":["EC:1.2.1.11","RHEA:24284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aspartate-semialdehyde dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02291","MetaCyc:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"ASA dehydrogenase activity","type":"related"},{"name":"L-aspartate-4-semialdehyde:NADP+ oxidoreductase (phosphorylating)","type":"related"},{"name":"L-aspartate-beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"L-aspartate-beta-semialdehyde:NADP oxidoreductase (phosporylating)","type":"related"},{"name":"aspartate semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004073","terms_by_termid":{"GO:0004073":null}}


id: FYPO:0007876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the plasma membrane is smoother than normal at the shmoo tip. Normally, the plasma membrane of one of a pair of mating cells is slack shmoo tip, forming waves instead of a smooth arc.","definition_xrefs":["PomBase:mah","PMID:34382996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased plasma membrane waviness at shmoo tip","synonyms":[{"name":"abnormally smooth plasma membrane at shmoo tip","type":"related"},{"name":"decreased plasma membrane waviness at mating projection tip","type":"exact"},{"name":"decreased plasma membrane waviness at shmoo projection","type":"exact"},{"name":"reduced plasma membrane waviness at shmoo tip","type":"exact"}],"termid":"FYPO:0007876"}


id: PBO:0039458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 10","termid":"PBO:0039458"}


id: GO:0048309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The partitioning of endoplasmic reticulum between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum inheritance","synonyms":[{"name":"ER inheritance","type":"exact"}],"termid":"GO:0048309"}


id: MOD:01534
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01534"}


id: FYECO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ions","termid":"FYECO:0000030"}


id: GO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitochondrial DNA replication.","definition_xrefs":["PMID:29931097","PMID:28408491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"},{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"part_of","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"DNA synthesis involved in mitochondrial DNA replication","synonyms":[{"name":"DNA biosynthetic process involved in mitochondrial DNA replication","type":"exact"}],"termid":"GO:0110166"}


id: GO:0070091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of glucagon from secretory granules in the A (alpha) cells of the pancreas (islets of Langerhans).","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glucagon secretion","termid":"GO:0070091"}


id: GO:0036407
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mycolic acid-rich cell outer membrane containing a lipid bilayer and long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network. Found in mycobacteria and related genera (e.g. corynebacteria).","definition_xrefs":["PMID:18316738","GOC:md","GOC:das","PMID:18567661","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mycolate outer membrane","synonyms":[{"name":"MOM","type":"exact"},{"name":"mycobacterial outer membrane","type":"exact"},{"name":"mycomembrane","type":"exact"}],"termid":"GO:0036407"}


id: GO:1903679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GO_REF:0000058","PMID:11959995","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-independent translational initiation","termid":"GO:1903677"},{"relation_name":"is_a","term_name":"positive regulation of cytoplasmic translational initiation","termid":"GO:1904690"},{"relation_name":"positively_regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cap-independent translational initiation","synonyms":[{"name":"activation of cap-independent translational initiation","type":"narrow"},{"name":"up regulation of cap-independent translational initiation","type":"exact"},{"name":"up-regulation of cap-independent translational initiation","type":"exact"},{"name":"upregulation of cap-independent translational initiation","type":"exact"}],"termid":"GO:1903679"}


id: PBO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.99.1","termid":"PBO:0000159"}


id: PBO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.65","termid":"PBO:0001842"}


id: GO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoarabinomannan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"lipoarabinomannan immune receptor activity","synonyms":[{"name":"LAM receptor activity","type":"exact"},{"name":"lipoarabinomannan receptor activity","type":"broad"}],"termid":"GO:0001877"}


id: GO:0005111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 fibroblast growth factor receptor (FGFR2).","definition_xrefs":["GOC:fb_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 fibroblast growth factor receptor binding","synonyms":[{"name":"FGFR2 binding","type":"exact"},{"name":"FGFR2 ligand","type":"narrow"},{"name":"heartless binding","type":"exact"},{"name":"heartless ligand","type":"narrow"},{"name":"type 2 fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005111"}


id: PBO:0084242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Initiator methionine 2'-O-ribosyl phosphate transferase; modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA","termid":"PBO:0084242"}


id: PBO:0085716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0085716"}


id: PBO:0058754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6878","termid":"PBO:0058754"}


id: GO:0003808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of blood coagulation factors Va and VIIIa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C (activated) activity (obsolete GO:0003808)","synonyms":[{"name":"GSAPC","type":"related"},{"name":"activated blood coagulation factor XIV activity","type":"related"},{"name":"activated protein C","type":"related"},{"name":"autoprothrombin II-A","type":"related"},{"name":"autoprothrombin IIA activity","type":"related"},{"name":"blood-coagulation factor XIVa","type":"related"},{"name":"protein C (activated) activity","type":"exact"},{"name":"protein Ca","type":"related"}],"termid":"GO:0003808"}


id: PBO:0013743
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S pombe Heme Utilization","termid":"PBO:0013743"}


id: GO:0010260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that occurs in an animal organ near the end of its active life that is associated with the dismantling of cell components and membranes, and an overall decline in metabolism.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete animal organ senescence (obsolete GO:0010260)","termid":"GO:0010260"}


id: GO:0043779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 5A + H2O = cobalt-precorrin 5B + acetaldehyde + H+.","definition_xrefs":["RHEA:26281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cobalt-precorrin-5A acetaldehyde-lyase activity","secondary_identifiers":["EC:3.7.1.12","MetaCyc:RXN-8763"],"synonyms":[{"name":"cobalt-precorrin 5A acetaldehyde-lyase activity","type":"exact"}],"termid":"GO:0043779"}


id: PBO:0030778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercaptoethanol","termid":"PBO:0030778"}


id: PBO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYB pseudogene 1","termid":"PBO:0060971"}


id: PATO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000597 absolute width value (obsolete PATO:0000597)","termid":"PATO:0000597"}


id: PATO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000612 relative orientation value (obsolete PATO:0000612)","termid":"PATO:0000612"}


id: GO:0031445
data:
  {"annotated_genes":["SJAG_03664","SJAG_01867","SJAG_04369","SJAG_02381","SJAG_03255","SJAG_01599","SJAG_04186","SJAG_02723","SJAG_01511","SJAG_03624","SJAG_02990","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86291,93898],"is_not":false,"summary":null,"term":"GO:0031445"},{"annotations":[76092,101851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[103664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[76091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061186"},{"annotations":[94287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[92548,95592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[112733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[87310,113075,92549,99445,95593,112734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of heterochromatin formation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of heterochromatin organization","termid":"GO:0120261"},{"relation_name":"regulates","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02381":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04186":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"regulation of heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of heterochromatin assembly","type":"exact"}],"termid":"GO:0031445","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061186":null,"GO:0061188":null,"GO:0090052":null,"GO:1902801":null}}


id: GO:0051201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of prosthetic group metabolic process (obsolete GO:0051201)","synonyms":[{"name":"down regulation of prosthetic group metabolic process","type":"exact"},{"name":"down-regulation of prosthetic group metabolic process","type":"exact"},{"name":"downregulation of prosthetic group metabolic process","type":"exact"},{"name":"inhibition of prosthetic group metabolic process","type":"narrow"},{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"negative regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"negative regulation of prosthetic group metabolism","type":"exact"}],"termid":"GO:0051201"}


id: PBO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rapamycin","termid":"PBO:0031353"}


id: FYPO:0001181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucosidase activity","termid":"FYPO:0001182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal maltase activity","synonyms":[{"name":"normal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001181"}


id: GO:1905737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["GO_REF:0000058","PMID:24344203","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proline import across plasma membrane","termid":"GO:1902836"},{"relation_name":"is_a","term_name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"},{"relation_name":"positively_regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-proline import across plasma membrane","termid":"GO:1905737"}


id: PBO:0073293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 15","termid":"PBO:0073293"}


id: PBO:0076140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase GDP-forming subunit beta","termid":"PBO:0076140"}


id: GO:0035628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cystic duct over time, from its formation to the mature structure. The cystic duct runs from the gallbladder to the common bile duct.","definition_xrefs":["PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct development","termid":"GO:0061009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cystic duct development","termid":"GO:0035628"}


id: PBO:0042645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 20 pseudogene","termid":"PBO:0042645"}


id: PBO:0059265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L30 pseudogene 2","termid":"PBO:0059265"}


id: PBO:0064086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNA antisense RNA 1","termid":"PBO:0064086"}


id: PBO:0076972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 3","termid":"PBO:0076972"}


id: GO:1900232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single-species biofilm formation","termid":"GO:1900191"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"},{"relation_name":"negatively_regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single-species biofilm formation on inanimate substrate","synonyms":[{"name":"down regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"down-regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"downregulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"inhibition of single-species biofilm formation on inanimate substrate","type":"narrow"}],"termid":"GO:1900232"}


id: PBO:0063953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 beta","termid":"PBO:0063953"}


id: GO:0061317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin and contributing to cardiac muscle cell fate commitment. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["PMID:17576928","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway involved in heart development","termid":"GO:0061316"},{"relation_name":"part_of","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:0061317"}


id: PBO:0075145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 1","termid":"PBO:0075145"}


id: PBO:0084347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1); chromatin assembly by CAF-1 is important for multiple processes including histone H3/H4 tetramerization, silencing at telomeres, mating type loci and rDNA, maintenance of kinetochore structure, deactivation of  DNA damage checkpoint after DNA repair, chromatin dynamics during transcription, and repression of divergent noncoding transcription","termid":"PBO:0084347"}


id: PBO:0053037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE xylosyl- and glucuronyltransferase 2","termid":"PBO:0053037"}


id: PBO:0027217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_large:small_ribosomal_subunit_ratio","termid":"PBO:0027217"}


id: GO:0022843
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a voltage-gated channel. A cation is a positively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2534378","Reactome:R-HSA-6788999"],"synonyms":[{"name":"voltage-gated cation channel activity","type":"broad"}],"termid":"GO:0022843","terms_by_termid":{"GO:0008331":null}}


id: PBO:0030564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_tyrosine_level","termid":"PBO:0030564"}


id: PBO:0091630
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteomics data indicates an N-terminally extended version of this gene which would contain an upstream stop codon and a frameshift","termid":"PBO:0091630"}


id: FYPO:0005532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H4 acetylation during vegetative growth","termid":"FYPO:0002364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H4-K16 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H4-K16 acetylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H4K16 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005532"}


id: GO:1901839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase I regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of RNA polymerase I regulatory region sequence-specific DNA binding","termid":"GO:1901839"}


id: PBO:0017931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2 (predicted)","termid":"PBO:0017931"}


id: PBO:0062523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily S member 1","termid":"PBO:0062523"}


id: PBO:0086597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced under calcium shortage","termid":"PBO:0086597"}


id: GO:0007043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a junction between cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction assembly","termid":"GO:0034329"},{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cell-cell junction assembly","synonyms":[{"name":"intercellular junction assembly","type":"exact"}],"termid":"GO:0007043"}


id: SO:0001727
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_monomethylation_site","synonyms":[{"name":"H3K9 mono-methylation site","type":"exact"},{"name":"H3K9Me1","type":"related"}],"termid":"SO:0001727"}


id: PBO:0049596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 14","termid":"PBO:0049596"}


id: FYPO:0000601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuolar transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar transport","synonyms":[{"name":"normal vacuolar protein transport","type":"narrow"},{"name":"normal vacuolar transport during mitotic cell cycle","type":"related"},{"name":"normal vacuolar transport during vegetative growth","type":"exact"},{"name":"vacuolar transport: normal","type":"related"}],"termid":"FYPO:0000601"}


id: GO:0090324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation","termid":"GO:0002082"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"}


id: PBO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6B","termid":"PBO:0060290"}


id: GO:1990006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic membrane-bounded vesicle first described in dendrites, categorized by smooth membranes, electron-lucent interiors and irregular shapes. Sometimes occurs in clumps. Amorphous vesicles have been found to contain material taken up from the extracellular space, therefore suggesting that they may be part of the endosomal pathway.","definition_xrefs":["NIF_Subcellular:sao1531915298","PMID:11896161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amorphous vesicle","termid":"GO:1990006"}


id: PBO:0083692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme regulator; involved in synthesis of phosphatidylinositol 3,5-bisphosphate, in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; binds negative (Fig4p) and positive (Fab1p) regulators of PtdIns(3,5)P(2) to control endolysosome function; similar to mammalian Vac14p","termid":"PBO:0083692"}


id: PBO:0082198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoinase; converts allantoin to allantoate in the first step of allantoin degradation; expression sensitive to nitrogen catabolite repression","termid":"PBO:0082198"}


id: FYPO:0001394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth may occur at either the new or old end of the cell, instead of exclusively at the old end, following cell division. A population of cells with this phenotype has a 1:1 mix of cells initiating growth at the new end and cells initiating growth at the old end.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal activation of monopolar cell growth","termid":"FYPO:0001393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"activation of monopolar cell growth at either end","synonyms":[{"name":"abnormal initiation of growth from either old or new end following cell division","type":"exact"},{"name":"activation of monopolar vegetative cell growth at either end","type":"exact"}],"termid":"FYPO:0001394"}


id: PBO:0068851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 89, pseudogene","termid":"PBO:0068851"}


id: GO:1904047
data:
  {"annotated_genes":["SJAG_03755","SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87715,93192],"is_not":false,"summary":null,"term":"GO:1904047"}]},"cv_name":"molecular_function","definition":"Binding to S-adenosyl-L-methionine.","definition_xrefs":["PMID:22985361","GO_REF:0000067","GOC:hal","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"S-adenosyl-L-methionine binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-947535","GO:0070283"],"synonyms":[{"name":"radical SAM enzyme activity","type":"narrow"}],"termid":"GO:1904047","terms_by_termid":{"GO:1904047":null}}


id: PBO:0042111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC183 antisense RNA 1","termid":"PBO:0042111"}


id: FYPO:0002840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromosome during vegetative growth","synonyms":[{"name":"increased protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002840"}


id: MOD:00936
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - hydroxylactam adduct, K and N-term","synonyms":[{"name":"LG-Hlactam-K","type":"related"},{"name":"Levuglandinyl - lysine hydroxylactam adduct","type":"related"}],"termid":"MOD:00936"}


id: GO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (pseudohyphal growth) (obsolete GO:0000191)","synonyms":[{"name":"activation of MAPKKK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000191"}


id: GO:0046333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"octopamine metabolic process","synonyms":[{"name":"octopamine metabolism","type":"exact"}],"termid":"GO:0046333"}


id: PBO:0075608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondin 2","termid":"PBO:0075608"}


id: PR:P17477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.13c","synonyms":[{"name":"A3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp102","type":"exact"}],"termid":"PR:P17477"}


id: GO:0044785
data:
  {"annotated_genes":["SJAG_00145","SJAG_01837","SJAG_04853","SJAG_01082","SJAG_03327","SJAG_00666","SJAG_01330","SJAG_04259","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101517,109563],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[111684],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[95424,94018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[95425,97550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[94019],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[108868],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[90538],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[96620],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"},{"relation_name":"is_a","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04259":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:0044785","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990949":null,"GO:1990950":null}}


id: PBO:0028061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_mitotic_G2_phase","termid":"PBO:0028061"}


id: MOD:01886
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an sulfanyl or substituted sulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiolated residue","termid":"MOD:01886"}


id: PBO:0063315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain containing 2","termid":"PBO:0063315"}


id: GO:0043473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigmentation","termid":"GO:0043473"}


id: MOD:00433
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an glucose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"glucosylated","termid":"MOD:00726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"glucosylated residue","synonyms":[{"name":"GlcRes","type":"exact"}],"termid":"MOD:00433"}


id: FYPO:0005593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of inositol phosphorylceramide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular inositol phosphorylceramide level","synonyms":[{"name":"increased cellular IPC level","type":"exact"},{"name":"increased cellular inositol phosphorylceramide level during mitotic cell cycle","type":"related"},{"name":"increased cellular inositol phosphorylceramide level during vegetative growth","type":"exact"},{"name":"increased inositol phosphorylceramide accumulation","type":"related"}],"termid":"FYPO:0005593"}


id: PBO:0087602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CBF3 complex; F-box protein of the leucine-rich-repeat family; required for assembly of the complex; CBF3 binds to the CDE III element of centromeres, bending the DNA upon binding, and may be involved in sister chromatid cohesion during mitosis","termid":"PBO:0087602"}


id: GO:2000793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell proliferation that is involved in heart valve development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart valve development","synonyms":[{"name":"cell proliferation of cardiac valve development","type":"exact"},{"name":"cell proliferation of heart valve development","type":"exact"}],"termid":"GO:2000793"}


id: PBO:0066991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 294","termid":"PBO:0066991"}


id: PBO:0064437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1 pseudogene 2","termid":"PBO:0064437"}


