# terms

id: PBO:0091570
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein Light Intermediate chain","termid":"PBO:0091570"}


id: SO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which decreases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_translational_product_level","synonyms":[{"name":"decrease translational product level","type":"exact"}],"termid":"SO:0001555"}


id: GO:0045428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"regulates","term_name":"nitric oxide biosynthetic process","termid":"GO:0006809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide biosynthetic process","synonyms":[{"name":"regulation of nitric oxide anabolism","type":"exact"},{"name":"regulation of nitric oxide biosynthesis","type":"exact"},{"name":"regulation of nitric oxide formation","type":"exact"},{"name":"regulation of nitric oxide synthesis","type":"exact"}],"termid":"GO:0045428"}


id: PBO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF654 family protein","termid":"PBO:0002144"}


id: SO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a CDS resulting in the loss of an amino acid from the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_deletion","secondary_identifiers":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"synonyms":[{"name":"amino acid deletion","type":"exact"}],"termid":"SO:0001604"}


id: GO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures of a host cell.","definition_xrefs":["GOC:jl","PMID:20463076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periphery","termid":"GO:0044538"}


id: GO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The specific immune response mediated by antibodies. As in, but not restricted to, the taxon Protostomia (Protostomia, ncbi_taxonomy_id:33317).","definition_xrefs":["GOC:jid","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete humoral defense mechanism (sensu Protostomia) (obsolete GO:0016065)","synonyms":[{"name":"humoral defence mechanism (sensu Protostomia)","type":"exact"},{"name":"humoral defense mechanism (sensu Protostomia)","type":"exact"}],"termid":"GO:0016065"}


id: GO:0007460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R8 photoreceptor commits to its cell fate. The R8 receptor contributes the central part of the rhabdomere in the basal parts of the ommatidium.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell fate commitment","secondary_identifiers":["GO:0007461"],"synonyms":[{"name":"restriction of R8 fate","type":"exact"}],"termid":"GO:0007460"}


id: SO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_C_cluster","synonyms":[{"name":"D DJ C cluster","type":"exact"},{"name":"D-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000504"}


id: PBO:0011102
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel syndrome","termid":"PBO:0011102"}


id: GO:0010063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces or promotes trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of plant epidermal cell differentiation","termid":"GO:1903890"},{"relation_name":"positively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trichoblast fate specification","synonyms":[{"name":"activation of trichoblast fate","type":"narrow"},{"name":"stimulation of trichoblast fate","type":"narrow"},{"name":"up regulation of trichoblast fate","type":"exact"},{"name":"up-regulation of trichoblast fate","type":"exact"},{"name":"upregulation of trichoblast fate","type":"exact"}],"termid":"GO:0010063"}


id: PBO:0044393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 18","termid":"PBO:0044393"}


id: PBO:0057504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 622","termid":"PBO:0057504"}


id: PBO:0043971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 1","termid":"PBO:0043971"}


id: PBO:0068634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 14, pseudogene","termid":"PBO:0068634"}


id: SO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A proviral gene with origin endogenous retrovirus.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"endogenous_retroviral_sequence","termid":"SO:0000903"},{"relation_name":"is_a","term_name":"proviral_gene","termid":"SO:0000099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous_retroviral_gene","synonyms":[{"name":"endogenous retroviral gene","type":"exact"}],"termid":"SO:0000100"}


id: PBO:0051630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1","termid":"PBO:0051630"}


id: PBO:0028986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-overlapping_meiosis_I_spindles","termid":"PBO:0028986"}


id: PBO:0067517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 658, pseudogene","termid":"PBO:0067517"}


id: GO:0000493
data:
  {"annotated_genes":["SJAG_03551","SJAG_03125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75538,78549],"is_not":false,"summary":null,"term":"GO:0000493"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and a box H/ACA snoRNA to form a box H/ACA small nucleolar ribonucleoprotein (snoRNP) complex.","definition_xrefs":["GOC:krc","PMID:12515383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nucleolar ribonucleoprotein complex assembly","termid":"GO:0000491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03125":null,"SJAG_03551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"box H/ACA snoRNP assembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA small nucleolar ribonucleoprotein complex assembly","type":"exact"}],"termid":"GO:0000493","terms_by_termid":{"GO:0000493":null}}


id: PBO:0030594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_aspartate_level","termid":"PBO:0030594"}


id: GO:0071019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and the U12, U5 and U6atac snRNPs.","definition_xrefs":["GOC:krc","PMID:16201866","ISBN:0879697393","GOC:mah","GOC:ab","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"post-mRNA release spliceosomal complex","termid":"GO:0071014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U12-type post-mRNA release spliceosomal complex","synonyms":[{"name":"AT-AC post-mRNA release spliceosomal complex","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex I","type":"narrow"},{"name":"minor post-mRNA release spliceosomal complex","type":"exact"}],"termid":"GO:0071019"}


id: PBO:0078364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 8-2","termid":"PBO:0078364"}


id: GO:1990368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to hydrolysate (product of hydrolysis).","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to hydrolysate (obsolete GO:1990368)","synonyms":[{"name":"process resulting in tolerance to hydrolysate","type":"exact"}],"termid":"GO:1990368"}


id: PBO:0027470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NAD(P)H_oxidase_activity","termid":"PBO:0027470"}


id: PR:Q9UT75
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA dimethylallyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00683","PANTHER:PTHR11088:SF21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dimethylallyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.15","secondary_identifiers":["UniProtKB:Q9UT75"],"synonyms":[{"name":"IPP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TRIT1","type":"exact"},{"name":"isopentenyl-diphosphate: tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT75"}


id: PBO:0004426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 1 (predicted)","termid":"PBO:0004426"}


id: PBO:0052136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 3","termid":"PBO:0052136"}


id: GO:0046799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recruitment of the helicase-primase complex to viral DNA lesions during viral DNA repair.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral DNA repair","termid":"GO:0046787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"recruitment of helicase-primase complex to DNA lesions","termid":"GO:0046799"}


id: GO:0021672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 7. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 7 morphogenesis","termid":"GO:0021671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 structural organization","synonyms":[{"name":"rhombomere 7 structural organisation","type":"exact"}],"termid":"GO:0021672"}


id: GO:0071235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a proline stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to proline","termid":"GO:0010238"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to proline","termid":"GO:0071235"}


id: PBO:0017821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain protein Man1, Sad1 interacting factor","termid":"PBO:0017821"}


id: PBO:0027012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_catalytic_activity","termid":"PBO:0027012"}


id: FYPO:0005429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal during G2 phase of the mitotic cell cycle. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased UV-damage excision repair","termid":"FYPO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"decreased UV-damage excision repair during mitotic G2 phase","synonyms":[{"name":"decreased UV-damage excision repair during G2 phase of mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during mitotic G2 during vegetative growth","type":"exact"},{"name":"reduced UV-damage excision repair during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0005429"}


id: PBO:0062947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 5","termid":"PBO:0062947"}


id: PBO:0035861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton","termid":"PBO:0035861"}


id: GO:1903768
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of taste receptor activity.","definition_xrefs":["GO_REF:0000088","GOC:BHF","GOC:TermGenie","GOC:rl","PMID:16720576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"taste receptor complex","termid":"GO:1903768"}


id: FYPO:0004772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular histidine level","termid":"FYPO:0001567"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar histidine level","synonyms":[{"name":"increased level of histidine in vacuole","type":"exact"},{"name":"increased vacuolar L-histidine level","type":"exact"},{"name":"increased vacuolar histidine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar histidine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004772"}


id: PBO:0017656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA/Iml1/Npr2/3 complex subunit Npr2 (predicted)","termid":"PBO:0017656"}


id: PBO:0052500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 12","termid":"PBO:0052500"}


id: PBO:0086498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane permease; proposed to be involved in carboxylic acid uptake and repressed by thiamine; substrate of Dbf2p/Mob1p kinase; transcription is altered if mitochondrial dysfunction occurs","termid":"PBO:0086498"}


id: PBO:0029974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest","termid":"PBO:0029974"}


id: GO:0008024
data:
  {"annotated_genes":["SJAG_01213","SJAG_01149","SJAG_03967","SJAG_02057","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91179,106028,77775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[104036,104193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.","definition_xrefs":["GOC:bhm","GOC:vw","PMID:16721054","PMID:10766736","PMID:17079683","PMID:19328067","PMID:7759473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"},{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"cyclin/CDK positive transcription elongation factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0008024","terms_by_termid":{"GO:0070691":null,"GO:0070692":null}}


id: PBO:0050555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicobacter pylori responsive 1","termid":"PBO:0050555"}


id: GO:0075528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus effects a change in the host immune response.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virus-mediated perturbation of host defense response","termid":"GO:0019049"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation by virus of host immune response","synonyms":[{"name":"regulation by virus of host immune system process","type":"exact"}],"termid":"GO:0075528"}


id: GO:1901917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exoribonuclease activity.","definition_xrefs":["PMID:22570495","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribonuclease activity","termid":"GO:0060700"},{"relation_name":"is_a","term_name":"regulation of exonuclease activity","termid":"GO:1905777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of exoribonuclease activity","termid":"GO:1901917"}


id: GO:1904581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intracellular mRNA localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:21471000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of intracellular mRNA localization","termid":"GO:1904580"},{"relation_name":"negatively_regulates","term_name":"intracellular mRNA localization","termid":"GO:0008298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular mRNA localization","synonyms":[{"name":"down regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"down regulation of intracellular mRNA localisation","type":"exact"},{"name":"down regulation of intracellular mRNA localization","type":"exact"},{"name":"down regulation of intracellular mRNA positioning","type":"narrow"},{"name":"down regulation of mRNA localization, intracellular","type":"exact"},{"name":"down regulation of mRNA positioning, intracellular","type":"narrow"},{"name":"down-regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"down-regulation of intracellular mRNA localisation","type":"exact"},{"name":"down-regulation of intracellular mRNA localization","type":"exact"},{"name":"down-regulation of intracellular mRNA positioning","type":"narrow"},{"name":"down-regulation of mRNA localization, intracellular","type":"exact"},{"name":"down-regulation of mRNA positioning, intracellular","type":"narrow"},{"name":"downregulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"downregulation of intracellular mRNA localisation","type":"exact"},{"name":"downregulation of intracellular mRNA localization","type":"exact"},{"name":"downregulation of intracellular mRNA positioning","type":"narrow"},{"name":"downregulation of mRNA localization, intracellular","type":"exact"},{"name":"downregulation of mRNA positioning, intracellular","type":"narrow"},{"name":"inhibition of establishment and maintenance of intracellular RNA localization","type":"narrow"},{"name":"inhibition of intracellular mRNA localisation","type":"narrow"},{"name":"inhibition of intracellular mRNA localization","type":"narrow"},{"name":"inhibition of intracellular mRNA positioning","type":"narrow"},{"name":"inhibition of mRNA localization, intracellular","type":"narrow"},{"name":"inhibition of mRNA positioning, intracellular","type":"narrow"},{"name":"negative regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"negative regulation of intracellular mRNA localisation","type":"exact"},{"name":"negative regulation of intracellular mRNA positioning","type":"narrow"},{"name":"negative regulation of mRNA localization, intracellular","type":"exact"},{"name":"negative regulation of mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:1904581"}


id: GO:0051264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mono-olein + mono-olein = diolein + glycerol. Mono-olein, also known as mono-oleoylglycerol, is the monoglyceride formed from oleic acid, 9-octodecenoic acid; diolein is also known as dioleoylglycerol.","definition_xrefs":["PMID:15364929","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"mono-olein transacylation activity","synonyms":[{"name":"MOG transacylation","type":"exact"},{"name":"acyl-CoA-independent mono-olein transacylation","type":"exact"},{"name":"mono-oleoylglycerol O-acyltransferase activity","type":"exact"},{"name":"mono-oleoylglycerol transacylase activity","type":"exact"},{"name":"monoolein transacylation","type":"exact"},{"name":"monooleoylglycerol O-acyltransferase activity","type":"exact"},{"name":"monooleoylglycerol transacylase activity","type":"exact"}],"termid":"GO:0051264"}


id: PBO:0072070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12","termid":"PBO:0072070"}


id: PBO:0085916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of a flavodoxin-like fold protein family that includes Pst2p and Ycp4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; RFS1 has a paralog, PST2, that arose from the whole genome duplication","termid":"PBO:0085916"}


id: PBO:0089343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter","termid":"PBO:0089343"}


id: GO:0048476
data:
  {"annotated_genes":["SJAG_01044","SJAG_00623"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73649,77684],"is_not":false,"summary":null,"term":"GO:0048476"}]},"cv_name":"cellular_component","definition":"An endodeoxyribonuclease complex that resolves the 4-way DNA intermediates of a Holliday junction into two separate duplex DNA molecules. Can be branch-migration associated.","definition_xrefs":["PMID:12374758","PMID:11207366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Holliday junction resolvase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Mus81-Eme1 complex","type":"narrow"},{"name":"Mus81-Eme1 holliday resolvase complex","type":"narrow"},{"name":"Mus81-Eme2 complex","type":"narrow"},{"name":"Mus81-Eme2 holliday resolvase complex","type":"narrow"},{"name":"resolvasome","type":"exact"}],"termid":"GO:0048476","terms_by_termid":{"GO:0048476":null}}


id: MOD:00063
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to N-acetyl-L-valine.","definition_xrefs":["RESID:AA0054","PubMed:1735421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-valine","synonyms":[{"name":"(2S)-2-acetamido-3-methylbutanoic acid","type":"exact"},{"name":"2-acetylamino-3-methylbutanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-methylbutanoic acid","type":"exact"},{"name":"AcVal","type":"exact"},{"name":"MOD_RES N-acetylvaline","type":"exact"},{"name":"N-acetyl-L-valine","type":"exact"},{"name":"N-acetylated L-valine","type":"exact"},{"name":"N-acetylvaline","type":"exact"}],"termid":"MOD:00063"}


id: GO:0042930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the siderochrome enterobactin, a cyclic trimer of 2, 3 dihydroxybenzoylserine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"enterobactin transport","synonyms":[{"name":"enterochelin transport","type":"exact"}],"termid":"GO:0042930"}


id: GO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.","definition_xrefs":["GOC:jl","UM-BBD_pathwayID:atr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"atrazine metabolic process","termid":"GO:0018873"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"atrazine catabolic process","secondary_identifiers":["MetaCyc:P141-PWY"],"synonyms":[{"name":"atrazine breakdown","type":"exact"},{"name":"atrazine catabolism","type":"exact"},{"name":"atrazine degradation","type":"exact"}],"termid":"GO:0019381"}


id: PBO:0084722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; required for accumulation of spliced COX1 mRNA; may have an additional role in translation of COX1 mRNA","termid":"PBO:0084722"}


id: GO:0006126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete other pathways of electron transport (obsolete GO:0006126)","synonyms":[{"name":"other pathways of electron transport","type":"exact"}],"termid":"GO:0006126"}


id: PBO:0062496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily C member 1 pseudogene","termid":"PBO:0062496"}


id: GO:0008576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP by an AAA-ATPase, involved in the heterotypic fusion of membrane vesicles with target membranes and the homotypic fusion of various membrane compartments.","definition_xrefs":["EC:3.6.4.6"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle-fusing ATPase activity (obsolete GO:0008576)","synonyms":[{"name":"vesicle-fusing ATPase activity","type":"exact"}],"termid":"GO:0008576"}


id: FYPO:0005852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"abnormal protein biotinylation during vegetative growth","termid":"FYPO:0005851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein biotinylation during vegetative growth","synonyms":[{"name":"decreased protein biotinylation during mitotic cell cycle","type":"related"},{"name":"reduced protein biotinylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005852"}


id: PBO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf3","termid":"PBO:0002673"}


id: GO:0006648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phosphatidylethanolamine biosynthetic process that proceeds via the enzymatic action of dihydrosphingosine phosphate lyase.","definition_xrefs":["PMID:15643073","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylethanolamine biosynthetic process","termid":"GO:0006646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dihydrosphingosine-1-P pathway","termid":"GO:0006648"}


id: GO:0060998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic spine development","termid":"GO:0060998"}


id: PBO:0042073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 142","termid":"PBO:0042073"}


id: GO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from a nucleotide base in DNA. An example is the deamination of cytosine to produce uracil.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA deamination","termid":"GO:0045006"}


id: PATO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000212 neural function (obsolete PATO:0000212)","termid":"PATO:0000212"}


id: SO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical 3' splice site has the sequence \\\"AG\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_cis_splice_site","termid":"SO:0000164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canonical_three_prime_splice_site","synonyms":[{"name":"canonical 3' splice site","type":"exact"},{"name":"canonical three prime splice site","type":"exact"}],"termid":"SO:0000676"}


id: GO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosamine 6-phosphate + H2O = D-tagatose 6-phosphate + NH3.","definition_xrefs":["PMID:10931310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"galactosamine-6-phosphate isomerase activity","synonyms":[{"name":"AgaI","type":"related"},{"name":"galactosamine-6-phosphate deaminase activity","type":"exact"}],"termid":"GO:0043877"}


id: PBO:0047173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 6","termid":"PBO:0047173"}


id: GO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the directed movement of a zoospore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete zoospore movement on or near host (obsolete GO:0075234)","synonyms":[{"name":"zoospore motility on or near host","type":"exact"}],"termid":"GO:0075234"}


id: FYPO:0004341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, begins later than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PMID:22139357","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed mitochondrial fission during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of mitochondrial division","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to H2O2","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial proliferation","type":"related"}],"termid":"FYPO:0004341"}


id: PBO:0046138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A like 1","termid":"PBO:0046138"}


id: GO:1990521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to and increases the activity of m7G(5')pppN diphosphatase.","definition_xrefs":["PMID:22323607"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activator activity (obsolete GO:1990521)","termid":"GO:1990521"}


id: GO:0061419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hypoxia (obsolete GO:0061419)","termid":"GO:0061419"}


id: PATO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being not overfilled.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncrowded","termid":"PATO:0000633"}


id: PBO:0081445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 302","termid":"PBO:0081445"}


id: GO:0004151
data:
  {"annotated_genes":["SJAG_00444","SJAG_00412","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71017,71324,71526],"is_not":false,"summary":null,"term":"GO:0004151"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + H2O = N-carbamoyl-L-aspartate + H+.","definition_xrefs":["EC:3.5.2.3","RHEA:24296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00444":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"dihydroorotase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-73571","KEGG_REACTION:R01993","MetaCyc:DIHYDROOROT-RXN"],"synonyms":[{"name":"(S)-dihydroorotate amidohydrolase activity","type":"related"},{"name":"DHOase activity","type":"related"},{"name":"carbamoylaspartic dehydrase activity","type":"related"},{"name":"dihydroorotate hydrolase activity","type":"related"}],"termid":"GO:0004151","terms_by_termid":{"GO:0004151":null}}


id: PBO:0030472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_separation","termid":"PBO:0030472"}


id: GO:0030641
data:
  {"annotated_genes":["SJAG_00516","SJAG_01397","SJAG_02716","SJAG_00212","SJAG_04955","SJAG_04258","SJAG_01129","SJAG_01913","SJAG_04616","SJAG_01669","SJAG_00136","SJAG_02470","SJAG_00301","SJAG_02023","SJAG_05294","SJAG_01817"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95794],"is_not":false,"summary":null,"term":"GO:0030641"},{"annotations":[72675,71309,70626,76530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[77129,70849,73322,91036,83603,72522,72182,99166,96923,78516,95306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal equilibrium of hydrogen ions (protons) within a cell or between a cell and its external environment.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"},{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02716":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular pH","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular hydrogen ion homeostasis","type":"exact"},{"name":"proton homeostasis","type":"exact"}],"termid":"GO:0030641","terms_by_termid":{"GO:0007035":null,"GO:0030641":null,"GO:0051453":null}}


id: PBO:0087801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; substrate of the phosphatase calcineurin; interacts with homolog Frt2p; promotes cell growth in stress conditions, possibly via a role in posttranslational translocation; FRT1 has a paralog, FRT2, that arose from the whole genome duplication","termid":"PBO:0087801"}


id: PBO:0054297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1688","termid":"PBO:0054297"}


id: PBO:0049122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein 2","termid":"PBO:0049122"}


id: PBO:0056225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E1","termid":"PBO:0056225"}


id: GO:0015470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Polypeptide antibiotic secreted by bacteria and able to kill bacteria of susceptible strains after absorption by specific cell surface receptor.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriocin activity (obsolete GO:0015470)","synonyms":[{"name":"bacteriocin activity","type":"exact"}],"termid":"GO:0015470"}


id: PBO:0077804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 2","termid":"PBO:0077804"}


id: PBO:0030252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_trehalose_level","termid":"PBO:0030252"}


id: SO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_noncoding_exon","synonyms":[{"name":"5' nc exon","type":"exact"},{"name":"5' non coding exon","type":"exact"},{"name":"five prime noncoding exon","type":"exact"}],"termid":"SO:0000445"}


id: GO:0018988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The periodic shedding of part or all of a protein-based cuticle, which is then replaced by a new protein-based cuticle. A cuticle is the outer layer of an animal which acts to prevent water loss.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete molting cycle, protein-based cuticle (obsolete GO:0018988)","synonyms":[{"name":"protein-based cuticle molting cycle","type":"exact"}],"termid":"GO:0018988"}


id: PBO:0078723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 3-1","termid":"PBO:0078723"}


id: PR:O14067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.08 gene.","definition_xrefs":["UniProtKB:O14067","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1687.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.08","synonyms":[{"name":"Spom972h-SPAC1687.08","type":"exact"}],"termid":"PR:O14067"}


id: GO:1900659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of emericellamide biosynthetic process","termid":"GO:1900658"},{"relation_name":"negatively_regulates","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"negative regulation of emericellamide biosynthetic process","synonyms":[{"name":"down regulation of emericellamide anabolism","type":"exact"},{"name":"down regulation of emericellamide biosynthesis","type":"exact"},{"name":"down regulation of emericellamide biosynthetic process","type":"exact"},{"name":"down regulation of emericellamide formation","type":"exact"},{"name":"down regulation of emericellamide synthesis","type":"exact"},{"name":"down-regulation of emericellamide anabolism","type":"exact"},{"name":"down-regulation of emericellamide biosynthesis","type":"exact"},{"name":"down-regulation of emericellamide biosynthetic process","type":"exact"},{"name":"down-regulation of emericellamide formation","type":"exact"},{"name":"down-regulation of emericellamide synthesis","type":"exact"},{"name":"downregulation of emericellamide anabolism","type":"exact"},{"name":"downregulation of emericellamide biosynthesis","type":"exact"},{"name":"downregulation of emericellamide biosynthetic process","type":"exact"},{"name":"downregulation of emericellamide formation","type":"exact"},{"name":"downregulation of emericellamide synthesis","type":"exact"},{"name":"inhibition of emericellamide anabolism","type":"exact"},{"name":"inhibition of emericellamide biosynthesis","type":"exact"},{"name":"inhibition of emericellamide biosynthetic process","type":"narrow"},{"name":"inhibition of emericellamide formation","type":"exact"},{"name":"inhibition of emericellamide synthesis","type":"exact"},{"name":"negative regulation of emericellamide anabolism","type":"exact"},{"name":"negative regulation of emericellamide biosynthesis","type":"exact"},{"name":"negative regulation of emericellamide formation","type":"exact"},{"name":"negative regulation of emericellamide synthesis","type":"exact"}],"termid":"GO:1900659"}


id: PATO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's disposition to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Trophic_level"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophic quality","synonyms":[{"name":"nutritional quality","type":"related"}],"termid":"PATO:0000056"}


id: GO:0001725
data:
  {"annotated_genes":["SJAG_01739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66076],"is_not":false,"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.","definition_xrefs":["PMID:16651381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin","termid":"GO:0042641"},{"relation_name":"is_a","term_name":"contractile actin filament bundle","termid":"GO:0097517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"stress fiber","references_by_uniquename":{"GO_REF:0000044":null},"synonyms":[{"name":"actin cable","type":"related"},{"name":"stress fibre","type":"exact"}],"termid":"GO:0001725","terms_by_termid":{"GO:0001725":null}}


id: PBO:0005469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit V (predicted)","termid":"PBO:0005469"}


id: PR:P40232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A casein kinase II subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01867","PANTHER:PTHR11740:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase II subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1851.03","secondary_identifiers":["UniProtKB:P40232"],"synonyms":[{"name":"CK II beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CSNK2B","type":"exact"}],"termid":"PR:P40232"}


id: PBO:0058980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLIP antisense RNA 1","termid":"PBO:0058980"}


id: PBO:0072979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2B member 3, pseudogene","termid":"PBO:0072979"}


id: GO:0052048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance (obsolete GO:0052048)","synonyms":[{"name":"interaction with host via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with host via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052048"}


id: GO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spine that originates from the axon, usually from the initial segment.","definition_xrefs":["NIF_Subcellular:sao18239917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal spine","synonyms":[{"name":"axon spine","type":"exact"}],"termid":"GO:0044308"}


id: PBO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 1","termid":"PBO:0075733"}


id: PBO:0081580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 507","termid":"PBO:0081580"}


id: GO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein serine/threonine phosphatase signaling protein activity (obsolete GO:0005081)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005081"}


id: GO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An angiotensin receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["PMID:17376402","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"angiotensin-activated signaling pathway involved in heart process","synonyms":[{"name":"angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"angiotensin receptor signalling pathway involved in heart process","type":"exact"},{"name":"angiotensin-mediated signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086098"}


id: PBO:0053751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 989","termid":"PBO:0053751"}


id: PBO:0063011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein membrane anchor with glycosphingolipid microdomains 1","termid":"PBO:0063011"}


id: GO:0106201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of amino acids and peptides linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on amino acids and peptides linked to the hydrolysis of a diphosphate (obsolete GO:0106201)","secondary_identifiers":["EC:7.4.3.-"],"termid":"GO:0106201"}


id: PBO:0042771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 76","termid":"PBO:0042771"}


id: PBO:0058140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-2","termid":"PBO:0058140"}


id: PBO:0052011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 1C","termid":"PBO:0052011"}


id: GO:0097581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lamellipodium. A lamellipodium is a thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments.","definition_xrefs":["GOC:als","PMID:16054028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellipodium organization","termid":"GO:0097581"}


id: PBO:0066488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A","termid":"PBO:0066488"}


id: GO:0072148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an epithelial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate commitment","termid":"GO:0072148"}


id: GO:0019030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form an icosahedron, a solid with 20 faces and 12 vertices. Icosahedral capsids have 12 pentamers plus 10(T-1) hexamers, where T is the triangulation number. Tobacco satellite necrosis virus has such a capsid structure.","definition_xrefs":["Wikipedia:Capsid","ISBN:071673706X","GOC:bm","VZ:885","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid","synonyms":[{"name":"quasispherical viral capsid","type":"exact"}],"termid":"GO:0019030"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: PBO:0086668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; predicted to have a role in transcription based on computational 'guilt by association' analysis","termid":"PBO:0086668"}


id: GO:0060361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air, usually by means of active wing movement.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight","termid":"GO:0060361"}


id: PBO:0030760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_silver_ion","termid":"PBO:0030760"}


id: GO:0039606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation initiation in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"symbiont-mediated suppression of host translation initiation","synonyms":[{"name":"suppression by virus of host translation initiation","type":"narrow"}],"termid":"GO:0039606"}


id: GO:0047572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + H2O = D-glycerate + phosphate.","definition_xrefs":["RHEA:12412","EC:3.1.3.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"3-phosphoglycerate phosphatase activity","secondary_identifiers":["MetaCyc:3-PHOSPHOGLYCERATE-PHOSPHATASE-RXN","KEGG_REACTION:R01511"],"synonyms":[{"name":"3-PGA phosphatase activity","type":"related"},{"name":"D-3-phosphoglycerate phosphatase activity","type":"related"},{"name":"D-glycerate-3-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0047572"}


id: FYPO:0000448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MCM complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal MCM complex assembly","synonyms":[{"name":"abnormal MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal MCM complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000448"}


id: PBO:0004395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3/6 docking factor (predicted)","termid":"PBO:0004395"}


id: PBO:0083174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W","termid":"PBO:0083174"}


id: GO:1902308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["GOC:rl","PMID:11953308","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein dephosphorylation","termid":"GO:0035304"},{"relation_name":"regulates","term_name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-serine dephosphorylation","termid":"GO:1902308"}


id: PBO:0052044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 1","termid":"PBO:0052044"}


id: GO:0002661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell tolerance induction","synonyms":[{"name":"regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"regulation of B-cell tolerance induction","type":"exact"},{"name":"regulation of B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002661"}


id: PBO:0074831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 27","termid":"PBO:0074831"}


id: PBO:0043067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 3","termid":"PBO:0043067"}


id: PBO:0030924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_long-chain_fatty_acid-CoA_ligase_activity","termid":"PBO:0030924"}


id: PBO:0078550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 40","termid":"PBO:0078550"}


id: GO:0045161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated ion channels become localized to distinct subcellular domains in the neuron. Specific targeting, clustering, and maintenance of these channels in their respective domains are essential to achieve high conduction velocities of action potential propagation.","definition_xrefs":["PMID:11456440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"neuronal ion channel clustering","termid":"GO:0045161"}


id: PBO:0036077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stubby_vegetative_cell","termid":"PBO:0036077"}


id: PBO:0045526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTWD1 pseudogene 2","termid":"PBO:0045526"}


id: PBO:0077159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE1 divergent transcript","termid":"PBO:0077159"}


id: GO:1905427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any intracellular signal transduction that is involved in positive regulation of cell growth.","definition_xrefs":["GOC:vw","PMID:15917811","GO_REF:0000060","GOC:TermGenie","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular signal transduction involved in positive regulation of cell growth (obsolete GO:1905427)","synonyms":[{"name":"intracellular protein kinase cascade involved in activation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in up regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in upregulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in activation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in up regulation of cell growth","type":"exact"},{"name":"intracellular signal transduction involved in up-regulation of cell growth","type":"exact"},{"name":"intracellular signal transduction involved in upregulation of cell growth","type":"exact"},{"name":"intracellular signal transduction pathway involved in activation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in positive regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in up regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in up-regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in upregulation of cell growth","type":"narrow"},{"name":"intracellular signaling cascade involved in activation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in positive regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in stimulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in up regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in up-regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in upregulation of cell growth","type":"related"},{"name":"intracellular signaling chain involved in activation of cell growth","type":"narrow"},{"name":"intracellular signaling chain involved in positive regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signaling chain involved in up regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in up-regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in upregulation of cell growth","type":"exact"},{"name":"intracellular signaling pathway involved in activation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in positive regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in stimulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in up regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in up-regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in upregulation of cell growth","type":"related"},{"name":"protein kinase cascade involved in activation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in stimulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in up regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in upregulation of cell growth","type":"narrow"},{"name":"signal transduction via intracellular signaling cascade involved in activation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in positive regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in stimulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in up regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in up-regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in upregulation of cell growth","type":"related"},{"name":"signal transmission via intracellular cascade involved in activation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in stimulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in up regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in upregulation of cell growth","type":"narrow"}],"termid":"GO:1905427"}


id: GO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate = L-2-succinylamino-6-oxopimelate + L-glutamate.","definition_xrefs":["RHEA:11960","EC:2.6.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"succinyldiaminopimelate transaminase activity","secondary_identifiers":["KEGG_REACTION:R04475","MetaCyc:SUCCINYLDIAMINOPIMTRANS-RXN"],"synonyms":[{"name":"N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N-succinyl-L-diaminopimelic glutamic transaminase activity","type":"related"},{"name":"succinyldiaminopimelate aminotransferase activity","type":"exact"},{"name":"succinyldiaminopimelate transferase activity","type":"related"}],"termid":"GO:0009016"}


id: PBO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 2","termid":"PBO:0050608"}


id: PBO:0091026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton adaptor for Rga7 GTPase activator Rng10","termid":"PBO:0091026"}


id: PBO:0088826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1","termid":"PBO:0088826"}


id: GO:0140331
data:
  {"annotated_genes":["SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68598],"is_not":false,"summary":null,"term":"GO:0140331"}]},"cv_name":"biological_process","definition":"The movement of an aminophospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminophospholipid transport","termid":"GO:0015917"},{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"aminophospholipid translocation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0140331","terms_by_termid":{"GO:0140331":null}}


id: PBO:0028524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9K14_acetylation","termid":"PBO:0028524"}


id: GO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"surface biofilm formation","termid":"GO:0090604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species surface biofilm formation","secondary_identifiers":["GO:0032022"],"synonyms":[{"name":"multicellular pellicle formation","type":"related"}],"termid":"GO:0090606"}


id: PBO:0068258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 5","termid":"PBO:0068258"}


id: FYPO:0006623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in the plasma membrane is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol phosphate level in plasma membrane","termid":"FYPO:0006222"},{"relation_name":"is_a","term_name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","termid":"FYPO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","synonyms":[{"name":"decreased 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level in plasma membrane","type":"exact"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in cell membrane","type":"exact"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"decreased plasma membrane PI(3,4,5)P3 level","type":"exact"},{"name":"decreased plasma membrane phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"},{"name":"reduced phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","type":"exact"}],"termid":"FYPO:0006623"}


id: GO:1902426
data:
  {"annotated_genes":["SJAG_02169","SJAG_00883","SJAG_03126","SJAG_03681","SJAG_04259","SJAG_03353","SJAG_02336","SJAG_01297","SJAG_01679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86210,94882,99149,102421,103429,107064,108863,109337,110928],"is_not":false,"summary":null,"term":"GO:1902426"}]},"cv_name":"biological_process","definition":"A positive regulation of the mitotic metaphase/anaphase transition that results from deactivation of the mitotic spindle assembly checkpoint.","definition_xrefs":["PMID:19075002","GOC:vw","GOC:TermGenie","GOC:dph","PMID:19592249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic spindle assembly checkpoint signaling","termid":"GO:0140499"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0023052","GO:0044772","GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"deactivation of mitotic spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of Mad2-dependent checkpoint","type":"related"},{"name":"down regulation of mitotic cell cycle spindle assembly checkpoint","type":"broad"},{"name":"down regulation of mitotic spindle assembly checkpoint","type":"broad"},{"name":"down-regulation of Mad2-dependent checkpoint","type":"related"},{"name":"down-regulation of mitotic cell cycle spindle assembly checkpoint","type":"broad"},{"name":"down-regulation of mitotic spindle assembly checkpoint","type":"broad"},{"name":"downregulation of Mad2-dependent checkpoint","type":"related"},{"name":"downregulation of mitotic cell cycle spindle assembly checkpoint","type":"broad"},{"name":"downregulation of mitotic spindle assembly checkpoint","type":"broad"},{"name":"inhibition of Mad2-dependent checkpoint","type":"related"},{"name":"inhibition of mitotic cell cycle spindle assembly checkpoint","type":"related"},{"name":"inhibition of mitotic spindle assembly checkpoint","type":"related"},{"name":"mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"mitotic spindle assembly deactivation","type":"exact"},{"name":"negative regulation of Mad2-dependent checkpoint","type":"related"},{"name":"negative regulation of mitotic cell cycle spindle assembly checkpoint","type":"broad"},{"name":"negative regulation of mitotic spindle assembly checkpoint","type":"broad"}],"termid":"GO:1902426","terms_by_termid":{"GO:1902426":null}}


id: PBO:0066403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REL proto-oncogene, NF-kB subunit","termid":"PBO:0066403"}


id: PBO:0086799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR220C is not an essential gene","termid":"PBO:0086799"}


id: PBO:0011493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centaurin Cnt5","termid":"PBO:0011493"}


id: PBO:0018168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex gamma subunit Lsg1","termid":"PBO:0018168"}


id: GO:0033358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-arabinose, uridinediphosphoarabinose, a substance composed of arabinose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-L-arabinose metabolic process","termid":"GO:0033356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-L-arabinose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-63"],"synonyms":[{"name":"UDP-L-arabinose anabolism","type":"exact"},{"name":"UDP-L-arabinose biosynthesis","type":"exact"},{"name":"UDP-L-arabinose formation","type":"exact"},{"name":"UDP-L-arabinose synthesis","type":"exact"}],"termid":"GO:0033358"}


id: FYPO:0005409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell that has arrested the mitotic cell cycle G1 phase in response to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during nitrogen starvation","termid":"FYPO:0004084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"normal cellular protein level during cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"normal protein accumulation during cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"related"},{"name":"normal protein level during cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"normal protein level during cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"normal protein level during mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"normal protein level during nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0005409"}


id: GO:0098618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-selenomethionine + tRNA(Met) => AMP + diphosphate + selenomethionyl-tRNA(Met).","definition_xrefs":["PMID:16661782","PMID:16661668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0140101","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"selenomethionine-tRNA ligase activity","secondary_identifiers":["Reactome:R-HSA-2408546"],"termid":"GO:0098618"}


id: PR:O42700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transaldolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10683:SF1","OMA:SCHPO04445","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.06c","secondary_identifiers":["UniProtKB:O42700"],"synonyms":[{"name":"Spom972h-TALDO1","type":"exact"}],"termid":"PR:O42700"}


id: PBO:0066807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 106","termid":"PBO:0066807"}


id: GO:0009786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asymmetric cell division","termid":"GO:0009786"}


id: GO:0046426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a receptor signaling pathway via JAK-STAT.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046425"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via STAT","termid":"GO:1904893"},{"relation_name":"negatively_regulates","term_name":"receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor signaling pathway via JAK-STAT","secondary_identifiers":["GO:2000365"],"synonyms":[{"name":"down regulation of JAK-STAT cascade","type":"exact"},{"name":"down-regulation of JAK-STAT cascade","type":"exact"},{"name":"downregulation of JAK-STAT cascade","type":"exact"},{"name":"inhibition of JAK-STAT cascade","type":"narrow"},{"name":"negative regulation of STAT protein import into nucleus","type":"narrow"},{"name":"negative regulation of STAT protein nuclear translocation","type":"narrow"}],"termid":"GO:0046426"}


id: PBO:0025535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22 (predicted)","termid":"PBO:0025535"}


id: GO:0019348
data:
  {"annotated_genes":["SJAG_04954","SJAG_00554","SJAG_00394","SJAG_02163","SJAG_03311","SJAG_04821","SJAG_00747","SJAG_03656","SJAG_03774","SJAG_03764","SJAG_02903","SJAG_00924","SJAG_04770","SJAG_05219","SJAG_00334","SJAG_02102","SJAG_00437","SJAG_03056","SJAG_04952"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101918],"is_not":false,"summary":null,"term":"GO:0019348"},{"annotations":[95299,73699,71543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[107649,98818,86596,89309,106198,93676,111752,74134,95283,95300,97560,104445,93728,83077,100215,71133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006488"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"dolichol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dolichol metabolism","type":"exact"}],"termid":"GO:0019348","terms_by_termid":{"GO:0006488":null,"GO:0019348":null,"GO:0019408":null}}


id: PBO:0091533
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ATP-bound F-actin Kd 35 nM","termid":"PBO:0091533"}


id: PBO:0090244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIK complex ubiquitin-protein ligase E3 subunit, Pmh1","termid":"PBO:0090244"}


id: SO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a GNA sequence in the (S)-GNA enantiomer.","definition_xrefs":["CHEBI:48017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GNA","termid":"SO:0001192"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S_GNA","synonyms":[{"name":"S GNA","type":"exact"}],"termid":"SO:0001196"}


id: PATO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"position","secondary_identifiers":["PATO:0001032","PATO:0001631"],"synonyms":[{"name":"location","type":"exact"},{"name":"placement","type":"exact"},{"name":"relational spatial quality","type":"exact"}],"termid":"PATO:0000140"}


id: PBO:0079221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTBK2 antisense RNA 1","termid":"PBO:0079221"}


id: PATO:0000813
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000813 odor type value (obsolete PATO:0000813)","termid":"PATO:0000813"}


id: GO:0048708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:vp","PMID:15139015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte differentiation","termid":"GO:0048708"}


id: PBO:0073842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC8A1 antisense RNA 1","termid":"PBO:0073842"}


id: GO:0018511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2,3-dihydroxy-2,3-dihydro-p-cumate + NAD+ = 2,3-dihydroxy-p-cumate + H+ + NADH.","definition_xrefs":["EC:1.3.1.58","RHEA:23772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05240","MetaCyc:RXN-665","UM-BBD_reactionID:r0396"],"synonyms":[{"name":"cis-2,3-dihydroxy-2,3-dihydro-p-cumate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018511"}


id: PBO:0054210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1590","termid":"PBO:0054210"}


id: GO:2000251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin cytoskeleton reorganization.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin cytoskeleton reorganization (obsolete GO:2000251)","synonyms":[{"name":"positive regulation of actin cytoskeleton remodeling","type":"exact"},{"name":"positive regulation of actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:2000251"}


id: GO:1900643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chanoclavine-I biosynthetic process (obsolete GO:1900643)","synonyms":[{"name":"regulation of chanoclavine-I anabolism","type":"exact"},{"name":"regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"regulation of chanoclavine-I formation","type":"exact"},{"name":"regulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900643"}


id: PBO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_multiseptate_cell","termid":"PBO:0031296"}


id: PBO:0047982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member J, pseudogene","termid":"PBO:0047982"}


id: PR:Q9UUA9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-rRNA-processing protein TSR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21250:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein tsr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.15","secondary_identifiers":["UniProtKB:Q9UUA9"],"synonyms":[{"name":"SPBC409.15","type":"related"},{"name":"Spom972h-TSR2","type":"exact"}],"termid":"PR:Q9UUA9"}


id: PBO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugation protein Prm1 (predicted)","termid":"PBO:0002209"}


id: PBO:0036415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane-actinomyosin ring linker protein Sbg1","termid":"PBO:0036415"}


id: PBO:0031136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_interphase_microtubule_nucleation","termid":"PBO:0031136"}


id: PBO:0042918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR pseudogene 1","termid":"PBO:0042918"}


id: GO:0015714
data:
  {"annotated_genes":["SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75483,88751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpyruvate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phosphoenolpyruvate transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015714","terms_by_termid":{"GO:1990536":null}}


id: PBO:0075873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 pseudogene 1","termid":"PBO:0075873"}


id: PBO:0081913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 880","termid":"PBO:0081913"}


id: FYPO:0009067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amorolfine. Cells stop growing (and may die) at a concentration of amorolfine that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to amorolfine","synonyms":[{"name":"hypersensitive to amorolfine","type":"exact"},{"name":"sensitive to amorolfine during mitotic cell cycle","type":"related"},{"name":"sensitive to amorolfine during vegetative growth","type":"exact"}],"termid":"FYPO:0009067"}


id: GO:0106264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: GTP + L-seryl-[protein] = GDP + H+ + O-phospho-L-seryl-[protein].","definition_xrefs":["RHEA:64020","GOC:sp","PMID:32322062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0003824","GO:0004672","GO:0016301"],"is_obsolete":false,"name":"protein serine kinase activity (using GTP as donor)","termid":"GO:0106264"}


id: GO:1901319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trehalose catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of trehalose metabolic process","termid":"GO:0090062"},{"relation_name":"positively_regulates","term_name":"trehalose catabolic process","termid":"GO:0005993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of trehalose catabolic process","synonyms":[{"name":"activation of mycose catabolic process","type":"exact"},{"name":"activation of mycose catabolism","type":"exact"},{"name":"activation of mykose catabolic process","type":"exact"},{"name":"activation of mykose catabolism","type":"exact"},{"name":"activation of trehalose breakdown","type":"exact"},{"name":"activation of trehalose catabolic process","type":"narrow"},{"name":"activation of trehalose catabolism","type":"exact"},{"name":"activation of trehalose degradation","type":"exact"},{"name":"positive regulation of mycose catabolic process","type":"exact"},{"name":"positive regulation of mycose catabolism","type":"exact"},{"name":"positive regulation of mykose catabolic process","type":"exact"},{"name":"positive regulation of mykose catabolism","type":"exact"},{"name":"positive regulation of trehalose breakdown","type":"exact"},{"name":"positive regulation of trehalose catabolism","type":"exact"},{"name":"positive regulation of trehalose degradation","type":"exact"},{"name":"up regulation of mycose catabolic process","type":"exact"},{"name":"up regulation of mycose catabolism","type":"exact"},{"name":"up regulation of mykose catabolic process","type":"exact"},{"name":"up regulation of mykose catabolism","type":"exact"},{"name":"up regulation of trehalose breakdown","type":"exact"},{"name":"up regulation of trehalose catabolic process","type":"exact"},{"name":"up regulation of trehalose catabolism","type":"exact"},{"name":"up regulation of trehalose degradation","type":"exact"},{"name":"up-regulation of mycose catabolic process","type":"exact"},{"name":"up-regulation of mycose catabolism","type":"exact"},{"name":"up-regulation of mykose catabolic process","type":"exact"},{"name":"up-regulation of mykose catabolism","type":"exact"},{"name":"up-regulation of trehalose breakdown","type":"exact"},{"name":"up-regulation of trehalose catabolic process","type":"exact"},{"name":"up-regulation of trehalose catabolism","type":"exact"},{"name":"up-regulation of trehalose degradation","type":"exact"},{"name":"upregulation of mycose catabolic process","type":"exact"},{"name":"upregulation of mycose catabolism","type":"exact"},{"name":"upregulation of mykose catabolic process","type":"exact"},{"name":"upregulation of mykose catabolism","type":"exact"},{"name":"upregulation of trehalose breakdown","type":"exact"},{"name":"upregulation of trehalose catabolic process","type":"exact"},{"name":"upregulation of trehalose catabolism","type":"exact"},{"name":"upregulation of trehalose degradation","type":"exact"}],"termid":"GO:1901319"}


id: PBO:0065601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleiotrophin","termid":"PBO:0065601"}


id: PBO:0088098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upstream serine/threonine kinase for the SNF1 complex; plays a role in pseudohyphal groth; partially redundant with Elm1p and Tos3p; members of this family have functional orthology with LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; SAK1 has a paralog, TOS3, that arose from the whole genome duplication","termid":"PBO:0088098"}


id: PBO:0028543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_primary_cell_septum_biogenesis","termid":"PBO:0028543"}


id: PBO:0081805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 734, pseudogene","termid":"PBO:0081805"}


id: PBO:0051002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 antisense RNA 2","termid":"PBO:0051002"}


id: PBO:0070764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11","termid":"PBO:0070764"}


id: GO:0060463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a lung lobe are generated and organized. A lung lobe is a projection that extends from the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"lung morphogenesis","termid":"GO:0060425"},{"relation_name":"part_of","term_name":"lung lobe development","termid":"GO:0060462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe morphogenesis","termid":"GO:0060463"}


id: GO:0031420
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030955"}]},"cv_name":"molecular_function","definition":"Binding to an alkali metal ion; alkali metals are those elements in group Ia of the periodic table, with the exception of hydrogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"alkali metal ion binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031420","terms_by_termid":{"GO:0030955":null}}


id: PBO:0038674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 1","termid":"PBO:0038674"}


id: GO:2000469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of peroxidase activity","termid":"GO:2000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peroxidase activity","synonyms":[{"name":"negative regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of oxyperoxidase activity","type":"exact"},{"name":"negative regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000469"}


id: GO:1990865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an episodic stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to intermittent hypoxia (obsolete GO:1990865)","termid":"GO:1990865"}


id: FYPO:0006300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere inner repeat regions is increased.","definition_xrefs":["PMID:16797182","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at centromere inner repeat","synonyms":[{"name":"increased protein localisation to chromatin at centromere inner repeat","type":"exact"},{"name":"increased protein localization to chromatin at centromere imr","type":"exact"},{"name":"increased protein localization to chromatin at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006300"}


id: PBO:0059131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 8","termid":"PBO:0059131"}


id: PBO:0039996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL8B pseudogene 2","termid":"PBO:0039996"}


id: PBO:0078095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 3L","termid":"PBO:0078095"}


id: PR:O94390
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit d, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.13","synonyms":[{"name":"Spom972h-atp7","type":"exact"}],"termid":"PR:O94390"}


id: PBO:0034512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_protein_location_at_cell_tip","termid":"PBO:0034512"}


id: GO:0018166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ATP-dependent addition of a tyrosine residue to the C-terminus of a protein; typically the addition of tyrosine to the C-terminus of detyrosinated alpha-tubulin by the enzyme tubulin-tyrosine ligase.","definition_xrefs":["RESID:AA0257"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein-tyrosinylation (obsolete GO:0018166)","termid":"GO:0018166"}


id: PBO:0079890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPP2 intronic transcript 1","termid":"PBO:0079890"}


id: GO:0036249
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113155],"is_not":false,"summary":null,"term":"GO:0036249"}]},"cv_name":"biological_process","definition":"The directed movement of cadmium ions into the vacuole.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"cadmium ion import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar cadmium import","type":"related"}],"termid":"GO:0036249","terms_by_termid":{"GO:0036249":null}}


id: GO:0097020
data:
  {"annotated_genes":["SJAG_02120","SJAG_00785"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75668,113742],"is_not":false,"summary":null,"term":"GO:0097020"}]},"cv_name":"molecular_function","definition":"Binding specifically to a substance (cargo) to deliver it to a COPII transport vesicle. Cargo receptors span a membrane (either the plasma membrane or a vesicle membrane), binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit soluble proteins to nascent vesicles.","definition_xrefs":["PMID:16957051","PMID:20236934","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00785":null,"SJAG_02120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"COPII receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097020","terms_by_termid":{"GO:0097020":null}}


id: GO:0051685
data:
  {"annotated_genes":["SJAG_03170","SJAG_00053","SJAG_04221","SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85907,99626],"is_not":false,"summary":null,"term":"GO:0051685"},{"annotations":[102219,110247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which the endoplasmic reticulum is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum localization","termid":"GO:0051643"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of ER location","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of ER localization","type":"related"},{"name":"maintenance of endoplasmic reticulum localization","type":"exact"}],"termid":"GO:0051685","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: PBO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo-[acyl-carrier-protein] synthase (predicted)","termid":"PBO:0001909"}


id: GO:0160018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of platelet rolling.","definition_xrefs":["GO_REF:0000058","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterotypic cell-cell adhesion","termid":"GO:0034116"},{"relation_name":"is_a","term_name":"regulation of platelet rolling","termid":"GO:0160017"},{"relation_name":"positively_regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet rolling","termid":"GO:0160018"}


id: PBO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricothiodystrophy disorder","termid":"PBO:0004218"}


id: PBO:0045091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX2 divergent transcript","termid":"PBO:0045091"}


id: GO:0015180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-alanine from one side of a membrane to the other. L-alanine is the L-enantiomer of 2-aminopropanoic acid.","definition_xrefs":["GOC:mah","ISBN:0198506732","GOC:go_curators","GOC:mtg_transport","GOC:jsg","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-alanine transmembrane transporter activity","synonyms":[{"name":"L-alanine transporter activity","type":"broad"}],"termid":"GO:0015180"}


id: PBO:0064672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 7","termid":"PBO:0064672"}


id: GO:0097188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts are deposited into the calcareous tooth structure known as dentin.","definition_xrefs":["GOC:sl","PMID:10206335","PMID:21196346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"dentinogenesis","termid":"GO:0097187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentin mineralization","synonyms":[{"name":"dentine mineralization","type":"exact"}],"termid":"GO:0097188"}


id: GO:0047589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 5-aminopentanoate = 5-oxopentanoate + L-glutamate.","definition_xrefs":["RHEA:10212","EC:2.6.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"5-aminovalerate transaminase activity","secondary_identifiers":["MetaCyc:VAGL-RXN","KEGG_REACTION:R02274"],"synonyms":[{"name":"5-aminopentanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"5-aminovalerate aminotransferase activity","type":"exact"},{"name":"delta-aminovalerate aminotransferase activity","type":"related"},{"name":"delta-aminovalerate transaminase activity","type":"related"}],"termid":"GO:0047589"}


id: PBO:0036528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator Bye1 (predicted)","termid":"PBO:0036528"}


id: PBO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase","termid":"PBO:0005540"}


id: PBO:0064136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 3","termid":"PBO:0064136"}


id: GO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell differentiation","termid":"GO:0045583"},{"relation_name":"positively_regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytotoxic T cell differentiation","synonyms":[{"name":"activation of cytotoxic T cell differentiation","type":"narrow"},{"name":"positive regulation of cytotoxic T cell development","type":"related"},{"name":"positive regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"positive regulation of cytotoxic T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of cytotoxic T cell differentiation","type":"narrow"},{"name":"up regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"up-regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"upregulation of cytotoxic T cell differentiation","type":"exact"}],"termid":"GO:0045585"}


id: GO:1990148
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homomeric protein complex that possesses glutamate dehydrogenase activity. This complex is evolutionarily conserved except that the number of homoprotomers per complex varies.","definition_xrefs":["PMID:22393408","GOC:bhm","PMID:23412807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glutamate dehydrogenase complex","synonyms":[{"name":"L-glutamate dehydrogenase complex","type":"related"},{"name":"L-glutamate:NADP+ oxidoreductase (deaminating) complex","type":"related"},{"name":"L-glutamic acid dehydrogenase complex","type":"related"},{"name":"NAD(P)-glutamate dehydrogenase complex","type":"related"},{"name":"NAD(P)H-dependent glutamate dehydrogenase complex","type":"related"},{"name":"dehydrogenase, glutamate (nicotinamide adenine dinucleotide (phosphate)) complex","type":"related"},{"name":"glutamate dehydrogenase (NADP+) complex","type":"related"},{"name":"glutamic acid dehydrogenase complex","type":"related"},{"name":"glutamic dehydrogenase complex","type":"related"}],"termid":"GO:1990148"}


id: GO:0090149
data:
  {"annotated_genes":["SJAG_05261","SJAG_02848","SJAG_03464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90351,97764,98020],"is_not":false,"summary":null,"term":"GO:0090149"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the separation of a single continuous mitochondrial membrane into two membranes and contributes to mitochondrial fission.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fission","termid":"GO:0090148"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02848":null,"SJAG_03464":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"mitochondrial membrane fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane fission involved in mitochondrial fission","type":"exact"},{"name":"mitochondrial membrane scission","type":"exact"}],"termid":"GO:0090149","terms_by_termid":{"GO:0090149":null}}


id: PBO:0050470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA cluster antisense RNA 2","termid":"PBO:0050470"}


id: PBO:0027522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_cytokinesis_checkpoint_signaling","termid":"PBO:0027522"}


id: PBO:0059649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 15","termid":"PBO:0059649"}


id: PBO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, transcriptional and translational regulator (predicted)","termid":"PBO:0004282"}


id: PBO:0091160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific trancription factor Pc","termid":"PBO:0091160"}


id: GO:0140676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fluctuation in the extracellular cAMP levels due to the alternate activation of adenylate cyclase, which produces cAMP, and phosphodiesterase, which degrades it. Occurs in Dictyostelium during early sorocarp development. Oscillation in signaling result is directional chemotaxis of cells towards the center of the aggregate.","definition_xrefs":["PMID:18657484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"oscillatory cAMP signaling","synonyms":[{"name":"cAMP relay","type":"exact"}],"termid":"GO:0140676"}


id: GO:1901067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ferulate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ferulate metabolic process","termid":"GO:0033494"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"ferulate catabolic process","synonyms":[{"name":"ferulate breakdown","type":"exact"},{"name":"ferulate catabolism","type":"exact"},{"name":"ferulate degradation","type":"exact"}],"termid":"GO:1901067"}


id: GO:0032838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic region","termid":"GO:0099568"},{"relation_name":"part_of","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plasma membrane bounded cell projection cytoplasm","termid":"GO:0032838"}


id: GO:1901278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ribose 5-phosphate.","definition_xrefs":["UniPathway:UPA00293","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate metabolic process","termid":"GO:0019693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-ribose 5-phosphate metabolic process","synonyms":[{"name":"D-ribose 5-phosphate metabolism","type":"exact"}],"termid":"GO:1901278"}


id: SO:1000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transposition whereby a copy of the segment between the first two breaks listed is inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segment.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_interchromosomal_transposition","synonyms":[{"name":"(Drosophila)iTp","type":"related"},{"name":"inverted interchromosomal transposition","type":"exact"}],"termid":"SO:1000156"}


id: PBO:0061091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK3 homeobox 2","termid":"PBO:0061091"}


id: CHEBI:69136
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latrunculin A","termid":"CHEBI:69136"}


id: SO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is recombinationally rearranged.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinationally_rearranged","synonyms":[{"name":"recombinationally rearranged","type":"exact"}],"termid":"SO:0000940"}


id: PBO:0051138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-13","termid":"PBO:0051138"}


id: PBO:0027414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027414"}


id: PBO:0056043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor tyrosine kinase","termid":"PBO:0056043"}


id: _global:directly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulates","termid":"_global:directly_regulates"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates","secondary_identifiers":["RO:0002629"],"termid":"_global:directly_positively_regulates"}


id: PBO:0017543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ubiquitin-protein ligase E3 subunit Mot2 (predicted)","termid":"PBO:0017543"}


id: PBO:0079727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 3 (pseudogene)","termid":"PBO:0079727"}


id: PBO:0066148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 4","termid":"PBO:0066148"}


id: PBO:0027839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cAMP-dependent_protein_kinase_activity","termid":"PBO:0027839"}


id: PBO:0058312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4685","termid":"PBO:0058312"}


id: PBO:0080206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VGF nerve growth factor inducible","termid":"PBO:0080206"}


id: GO:0055026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle tissue development","termid":"GO:0045843"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue development","termid":"GO:0055024"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle tissue development","synonyms":[{"name":"down regulation of cardiac muscle development","type":"exact"},{"name":"down-regulation of cardiac muscle development","type":"exact"},{"name":"downregulation of cardiac muscle development","type":"exact"},{"name":"inhibition of cardiac muscle development","type":"narrow"},{"name":"negative regulation of heart muscle development","type":"exact"}],"termid":"GO:0055026"}


id: PBO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (predicted)","termid":"PBO:0005693"}


id: GO:1990448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an exon-exon junction complex, a protein complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:24967911","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"exon-exon junction complex binding","synonyms":[{"name":"EJC binding","type":"exact"}],"termid":"GO:1990448"}


id: PR:Q9USL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup61 gene.","definition_xrefs":["UniProtKB:Q9USL4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.07c","synonyms":[{"name":"Spom972h-nup61","type":"exact"},{"name":"nuclear pore protein nup61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL4"}


id: GO:1903041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chondrocyte hypertrophy.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:23928032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of chondrocyte development","termid":"GO:0061181"},{"relation_name":"regulates","term_name":"chondrocyte hypertrophy","termid":"GO:0003415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte hypertrophy","termid":"GO:1903041"}


id: PBO:0091175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N alpha-acetylation related protein Nat2","termid":"PBO:0091175"}


id: PBO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase","termid":"PBO:0042805"}


id: GO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct assembly of ribosomes or ribosomal subunits in vivo, but is not a component of the assembled ribosome when performing its normal biological function.","definition_xrefs":["PMID:12150913","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal chaperone activity (obsolete GO:0000005)","synonyms":[{"name":"ribosomal chaperone activity","type":"exact"}],"termid":"GO:0000005"}


id: GO:0140759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 56) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 56). This reaction is the addition of a methyl group to the lysine residue at position 56 of the histone H3 protein.","definition_xrefs":["PMID:23451023","PMID:28743002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"histone H3K56 methyltransferase activity","synonyms":[{"name":"histone H3K56 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone-H3K56 methyltransferase activity","type":"exact"}],"termid":"GO:0140759"}


id: PBO:0078641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component interacting RNase","termid":"PBO:0078641"}


id: PBO:0072295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 13","termid":"PBO:0072295"}


id: PBO:0110363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 3 (MAM blood group)","termid":"PBO:0110363"}


id: _global:connects_on
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X connects_on Y, Z, R iff whenever Z is on a R, X is adjacent to a Y and adjacent to a Z.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connects_on","termid":"_global:connects_on"}


id: PBO:0057258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 485","termid":"PBO:0057258"}


id: PBO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C15","termid":"PBO:0045227"}


id: GO:0035929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any steroid that acts as a hormone into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"steroid hormone secretion","termid":"GO:0035929"}


id: PBO:0002582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT5 family histone acetyltransferase Mst1","termid":"PBO:0002582"}


id: FYPO:0002266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"},{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell wall polysaccharide level","synonyms":[{"name":"decreased cell wall polysaccharide accumulation","type":"related"},{"name":"decreased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall polysaccharide level during vegetative growth","type":"exact"},{"name":"reduced cell wall polysaccharide level","type":"exact"}],"termid":"FYPO:0002266"}


id: GO:0090244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state that contributes to somitogenesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Wnt signaling pathway involved in somitogenesis","synonyms":[{"name":"Wnt receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"Wnt receptor signalling","type":"exact"},{"name":"Wnt-activated signaling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:0090244"}


id: PBO:0081257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 26","termid":"PBO:0081257"}


id: PBO:0049588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 6","termid":"PBO:0049588"}


id: GO:0097668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).","definition_xrefs":["PMID:15147268","GOC:jd","GOC:vw","PMID:11283612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Saf1/Pof9 ubiquitin ligase complex","termid":"GO:0097668"}


id: FYPO:0006599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006599"}


id: PBO:0030452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaerobic_cell_population_growth","termid":"PBO:0030452"}


id: PBO:0069197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 451, pseudogene","termid":"PBO:0069197"}


id: FYPO:0007028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring at the medial cortex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to medial cortex septin ring during vegetative growth","synonyms":[{"name":"normal protein localisation to medial cortex septin ring during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortex septin ring during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007028"}


id: PBO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Snf22","termid":"PBO:0005787"}


id: PBO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.16","termid":"PBO:0000198"}


id: PBO:0039208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10 pseudogene 2","termid":"PBO:0039208"}


id: PBO:0055076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2493","termid":"PBO:0055076"}


id: GO:1990199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ATP-binding cassette (ABC) transporter complex made up of a dimer of MsbA. Facilitates the export across the plasma membrane of, amongst others, lipid A and lipopolysaccharide. In contrast to most ABC transporter complexes, each chain of the homodimer contains both the transmembrane domain (TMD) and the cytoplasmic ATP-binding domain (NBD).","definition_xrefs":["GOC:bhm","PMID:18024585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"MsbA transporter complex","synonyms":[{"name":"MsbA complex","type":"exact"},{"name":"MsbA dimer","type":"exact"}],"termid":"GO:1990199"}


id: PR:O43079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1 complex subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11134:SF3","PRO:DNx","OMA:SCHPO02550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit beta-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.02","secondary_identifiers":["UniProtKB:O43079"],"synonyms":[{"name":"Spom972h-AP1B1","type":"exact"},{"name":"beta(1)-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-1-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 1 beta-1 large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta-1 chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43079"}


id: PBO:0054602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2006","termid":"PBO:0054602"}


id: GO:0018718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxyphenanthrene + UDP-glucose = 2-hydroxy-1-phenanthryl-beta-D-glucopyranoside + UDP.","definition_xrefs":["UM-BBD_reactionID:r0569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1,2-dihydroxy-phenanthrene glycosyltransferase activity","termid":"GO:0018718"}


id: PBO:0084336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore-associated protein; required for chromosome segregation and kinetochore clustering; required for normal segregation of chromosomes in meiosis and mitosis; component of the FEAR regulatory network, which promotes Cdc14p release from the nucleolus during anaphase; potential Cdc28p substrate","termid":"PBO:0084336"}


id: PBO:0049997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 3","termid":"PBO:0049997"}


id: PBO:0064344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A2","termid":"PBO:0064344"}


id: PR:O94288
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar complex protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14428:SF5","OMA:SCHPO03754","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar complex-associated protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.03c","secondary_identifiers":["UniProtKB:O94288"],"synonyms":[{"name":"Spom972h-NOC3L","type":"exact"}],"termid":"PR:O94288"}


id: PBO:0036233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in DNA repair Rad8","termid":"PBO:0036233"}


id: PBO:0077901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase delta 1","termid":"PBO:0077901"}


id: PBO:0074559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 12","termid":"PBO:0074559"}


id: PBO:0039132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 2","termid":"PBO:0039132"}


id: GO:0009103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:mr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0005975","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide biosynthetic process","secondary_identifiers":["KEGG_PATHWAY:map00540"],"synonyms":[{"name":"LPS biosynthetic process","type":"exact"},{"name":"lipopolysaccharide anabolism","type":"exact"},{"name":"lipopolysaccharide biosynthesis","type":"exact"},{"name":"lipopolysaccharide formation","type":"exact"},{"name":"lipopolysaccharide synthesis","type":"exact"}],"termid":"GO:0009103"}


id: PBO:0090385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein Pno1","termid":"PBO:0090385"}


id: PBO:0042338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD70 molecule","termid":"PBO:0042338"}


id: PBO:0045068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 1","termid":"PBO:0045068"}


id: GO:0006677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycosylceramide metabolic process","synonyms":[{"name":"glycosylceramide metabolism","type":"exact"}],"termid":"GO:0006677"}


id: GO:0060601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of an epithelium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting from an epithelium","termid":"GO:0060601"}


id: PBO:0028261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules_present_in_decreased_numbers","termid":"PBO:0028261"}


id: PBO:0002687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone p-factor receptor","termid":"PBO:0002687"}


id: GO:0031434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitogen-activated protein kinase kinase, a protein that can phosphorylate a MAP kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitogen-activated protein kinase kinase binding","synonyms":[{"name":"MAPKK binding","type":"exact"}],"termid":"GO:0031434"}


id: GO:0070703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer of two mucus layers secreted by epithelial cells in the colon; the outer mucus layer is loosely packed and can be colonized by bacteria.","definition_xrefs":["GOC:mah","PMID:18806221","PMID:19432394","GOC:mm2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucus layer","termid":"GO:0070701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"outer mucus layer","termid":"GO:0070703"}


id: PBO:0051723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor related receptor","termid":"PBO:0051723"}


id: GO:1990796
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the axon terminus portion of a photoreceptor cell axon. A photoreceptor cell is a neuron specialized to detect and transduce light.","definition_xrefs":["PMID:19883736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor cell terminal bouton","termid":"GO:1990796"}


id: PBO:0059337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S7 pseudogene 2","termid":"PBO:0059337"}


id: PR:Q9UTT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTT1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.02c","synonyms":[{"name":"Spom972h-ubp15","type":"exact"},{"name":"deubiquitinating enzyme 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTT1"}


id: PBO:0071742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 40","termid":"PBO:0071742"}


id: PBO:0073213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssemaphorin 4F","termid":"PBO:0073213"}


id: PBO:0039338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, placental","termid":"PBO:0039338"}


id: PBO:0070676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 47","termid":"PBO:0070676"}


id: PBO:0052849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-5","termid":"PBO:0052849"}


id: GO:0018122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-asparagine to form peptidyl-N4-(ADP-ribosyl)-L-asparagine.","definition_xrefs":["RESID:AA0231"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine ADP-ribosylation (obsolete GO:0018122)","termid":"GO:0018122"}


id: FYPO:0006239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to centromere","synonyms":[{"name":"increased protein localisation to centromere","type":"exact"},{"name":"increased protein localisation to chromosome, centromeric region","type":"exact"},{"name":"increased protein localization to chromosome, centric region","type":"exact"},{"name":"increased protein localization to chromosome, centromeric region","type":"exact"}],"termid":"FYPO:0006239"}


id: PBO:0069518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 787, pseudogene","termid":"PBO:0069518"}


id: PBO:0041603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 14","termid":"PBO:0041603"}


id: PBO:0031451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-perforated_nuclear_envelope","termid":"PBO:0031451"}


id: PBO:0078152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 30","termid":"PBO:0078152"}


id: GO:0001552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A periodic process in which immature ovarian follicles degenerate and are subsequently re-absorbed.","definition_xrefs":["PMID:18638134","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle atresia","termid":"GO:0001552"}


id: GO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:mah","GOC:jp","PMID:9797333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"is_a","term_name":"cellular response to cold","termid":"GO:0070417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"trehalose metabolism in response to cold stress","synonyms":[{"name":"trehalose metabolic process involved in response to cold stress","type":"exact"}],"termid":"GO:0070415"}


id: PBO:0003531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tspO homolog/ peripheral benzodiazepine receptor homolog, involved in the transport cytoplas/mitochondrial of haem (predicted)","termid":"PBO:0003531"}


id: PBO:0064993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRCP pseudogene 1","termid":"PBO:0064993"}


id: GO:0002722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of B cell cytokine production","termid":"GO:0002721"},{"relation_name":"negatively_regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of B cell cytokine production","synonyms":[{"name":"down regulation of B cell cytokine production","type":"exact"},{"name":"down-regulation of B cell cytokine production","type":"exact"},{"name":"downregulation of B cell cytokine production","type":"exact"},{"name":"inhibition of B cell cytokine production","type":"narrow"},{"name":"negative regulation of B lymphocyte cytokine production","type":"exact"},{"name":"negative regulation of B-cell cytokine production","type":"exact"},{"name":"negative regulation of B-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002722"}


id: PBO:0060903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 2","termid":"PBO:0060903"}


id: PBO:0077239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 1","termid":"PBO:0077239"}


id: GO:0061755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the quantity of fibrinogen circulating in the bloodstream.","definition_xrefs":["GOC:bf","PMID:20570858","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circulating fibrinogen levels","termid":"GO:0044537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circulating fibrinogen levels","termid":"GO:0061755"}


id: PBO:0061426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NQO2 antisense RNA 1","termid":"PBO:0061426"}


id: GO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"retinoid metabolic process","synonyms":[{"name":"retinoid metabolism","type":"exact"}],"termid":"GO:0001523"}


id: GO:0010027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"thylakoid membrane organization","synonyms":[{"name":"thylakoid membrane organisation","type":"exact"},{"name":"thylakoid membrane organization and biogenesis","type":"related"}],"termid":"GO:0010027"}


id: PBO:0057241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 432","termid":"PBO:0057241"}


id: MOD:00751
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleic acid linked residue","synonyms":[{"name":"RNARes","type":"exact"}],"termid":"MOD:00751"}


id: PBO:0053566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 581","termid":"PBO:0053566"}


id: GO:1990484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactate (2-hydroxypropanoic acid) in the presence of oxygen.","definition_xrefs":["GOC:mengo_curators","PMID:8941775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate catabolic process","termid":"GO:1903457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobic lactate catabolic process","synonyms":[{"name":"aerobic lactic acid catabolic process","type":"related"}],"termid":"GO:1990484"}


id: GO:0006141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving purines.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of purine nucleobase metabolic process","synonyms":[{"name":"regulation of purine base metabolic process","type":"exact"},{"name":"regulation of purine base metabolism","type":"exact"}],"termid":"GO:0006141"}


id: PR:O60091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl24 gene.","definition_xrefs":["UniProtKB:O60091","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L24, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.10","synonyms":[{"name":"Spom972h-mrpl24","type":"exact"}],"termid":"PR:O60091"}


id: PBO:0031580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_septation","termid":"PBO:0031580"}


id: GO:0034955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxydiphenyl ether + O2 + H2O = 2-hydroxymuconate + phenol.","definition_xrefs":["UM-BBD_reactionID:r1451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxydiphenyl ether dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034955"}


id: PBO:0073506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 1B","termid":"PBO:0073506"}


id: PBO:0040721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL10 immune signaling adaptor","termid":"PBO:0040721"}


id: GO:0090506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"},{"relation_name":"part_of","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axillary shoot meristem initiation","synonyms":[{"name":"axillary bud meristem initiation","type":"related"}],"termid":"GO:0090506"}


id: PBO:0072477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 6","termid":"PBO:0072477"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["GOC:pz","EC:2.3.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"lecithin:11-cis retinol acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12563"],"termid":"GO:0102279"}


id: PBO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin 1","termid":"PBO:0047702"}


id: PBO:0078825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-8","termid":"PBO:0078825"}


id: MOD:01388
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 1-amino-2-propanol.","definition_xrefs":["RESID:AA0465","ChEBI:15675","PubMed:7328054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-amino-2-propanol","synonyms":[{"name":"(2R)-1-aminopropan-2-ol","type":"exact"},{"name":"1-amino-2-hydroxypropane","type":"exact"},{"name":"1-amino-2-propanol","type":"exact"},{"name":"1-methyl-2-aminoethanol","type":"exact"},{"name":"2-amino-1-methylethanol","type":"exact"},{"name":"2-hydroxy-1-propylamine","type":"exact"},{"name":"2-hydroxypropanamine","type":"exact"},{"name":"2-hydroxypropylamine","type":"exact"},{"name":"MOD_RES Decarboxylated threonine","type":"exact"},{"name":"alpha-aminoisopropyl alcohol","type":"exact"},{"name":"dCbxThr","type":"exact"},{"name":"decarboxylated threonine","type":"exact"},{"name":"isopropanolamine","type":"exact"},{"name":"threamine","type":"exact"}],"termid":"MOD:01388"}


id: PATO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of whether the bearer's disposition to perceive differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discrimination","termid":"PATO:0000189"}


id: FYPO:0007078
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114301,114304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a meiotic cell cycle process normally (i.e. indistinguishably from wild type). A meiotic cell cycle process is any of the processes that form part of the meiotic cell cycle, and thereby ensures successive accurate and complete genome replication and meiotic chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic cell cycle process","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"termid":"FYPO:0007078","terms_by_termid":{"FYPO:0000590":null}}


id: PBO:0004819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit l44 (predicted)","termid":"PBO:0004819"}


id: MOD:01947
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue and an L-aspartic acid residue with an ester bond to form  O-(L-isoaspartyl)-L-threonine.","definition_xrefs":["PubMed:8706862","RESID:AA0525#TDX","PubMed:17157318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"O-(L-isoaspartyl)-L-threonine","termid":"MOD:01978"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine (cross-link)","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"CROSSLNK isoaspartyl threonine ester (Thr-Asp)","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01947"}


id: PBO:0076879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX28 pseudogene 3","termid":"PBO:0076879"}


id: PBO:0063980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 14","termid":"PBO:0063980"}


id: GO:0052192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in environment of other organism involved in symbiotic interaction (obsolete GO:0052192)","synonyms":[{"name":"locomotion in environment of other organism during symbiotic interaction","type":"related"},{"name":"movement in environment of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052192"}


id: GO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a steroid hormone receptor into the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid hormone receptor import into nucleus (obsolete GO:0002146)","synonyms":[{"name":"steroid hormone receptor nuclear translocation","type":"narrow"}],"termid":"GO:0002146"}


id: GO:0099024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An infolding of the plasma membrane.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane invagination","termid":"GO:0099024"}


id: GO:1901946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of miltiradiene.","definition_xrefs":["PMID:22027823","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"miltiradiene metabolic process","termid":"GO:1901944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene biosynthetic process","synonyms":[{"name":"miltiradiene anabolism","type":"exact"},{"name":"miltiradiene biosynthesis","type":"exact"},{"name":"miltiradiene formation","type":"exact"},{"name":"miltiradiene synthesis","type":"exact"}],"termid":"GO:1901946"}


id: GO:0140978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial large ribosomal subunit.","definition_xrefs":["PMID:28892042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit binding","termid":"GO:0043023"},{"relation_name":"is_a","term_name":"mitochondrial ribosome binding","termid":"GO:0097177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit binding","synonyms":[{"name":"mitochondrial ribosomal large subunit binding","type":"exact"}],"termid":"GO:0140978"}


id: FYPO:0005063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 at the mating type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at mating type locus during vegetative growth","synonyms":[{"name":"increased histone H3 K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 methylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3K4me at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at mating type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005063"}


id: GO:0019389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucuronosides, any compound formed by combination in glycosidic linkage of a hydroxy compound with the anomeric carbon atom of a glucuronate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucuronoside metabolic process","synonyms":[{"name":"glucuronide metabolic process","type":"exact"},{"name":"glucuronide metabolism","type":"exact"},{"name":"glucuronoside metabolism","type":"exact"}],"termid":"GO:0019389"}


id: PBO:0003097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Pmr1","termid":"PBO:0003097"}


id: PBO:0030375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_adenine_starvation","termid":"PBO:0030375"}


id: PBO:0048560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha like","termid":"PBO:0048560"}


id: GO:0102436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-O-methylmyricetin + S-adenosyl-L-methionine = 7,4'-dimethylmyricetin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"7-methylmyricetin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13911"],"termid":"GO:0102436"}


id: PBO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 28","termid":"PBO:0070493"}


id: GO:0070098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a chemokine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to chemokine","termid":"GO:1990869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine-mediated signaling pathway","synonyms":[{"name":"chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070098"}


id: GO:0046717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of acid by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acid secretion","termid":"GO:0046717"}


id: PBO:0073601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 2","termid":"PBO:0073601"}


id: PBO:0053269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LILRA2 pseudogene 1","termid":"PBO:0053269"}


id: SO:0001450
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A positively charged, hydorophilic amino acid encoded by the codons AAA and AAG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine","synonyms":[{"name":"K","type":"exact"},{"name":"Lys","type":"exact"}],"termid":"SO:0001450"}


id: PBO:0069647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 924, pseudogene","termid":"PBO:0069647"}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: PBO:0041778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 1 pseudogene 1","termid":"PBO:0041778"}


id: GO:0008473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine = L-proline + NH4.","definition_xrefs":["EC:4.3.1.12","RHEA:24368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ornithine cyclodeaminase activity","secondary_identifiers":["KEGG_REACTION:R00671","MetaCyc:ORNITHINE-CYCLODEAMINASE-RXN"],"synonyms":[{"name":"L-ornithine ammonia-lyase (cyclizing)","type":"related"},{"name":"L-ornithine ammonia-lyase (cyclizing; L-proline-forming)","type":"related"},{"name":"OCD activity","type":"related"},{"name":"ornithine cyclase (deaminating) activity","type":"related"},{"name":"ornithine cyclase activity","type":"related"}],"termid":"GO:0008473"}


id: GO:0004969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"histamine receptor activity","termid":"GO:0004969"}


id: PBO:0034427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_localization_(obsolete_requires_localization)","termid":"PBO:0034427"}


id: GO:0102128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-dihydrocoumaroyl-CoA + 3 malonyl-CoA + 3 H+ = phloretin + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["GOC:pz","PMID:20356611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"chalcone synthase activity","secondary_identifiers":["MetaCyc:RXN-11468","EC:2.3.1.74"],"termid":"GO:0102128"}


id: GO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A preprogrammed process associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components. An example of this process is found in Arabidopsis thaliana, when older leaves or floral organs are shed.","definition_xrefs":["GOC:mtg_sensu","ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence (obsolete GO:0010149)","secondary_identifiers":["Wikipedia:Senescence"],"synonyms":[{"name":"senescence","type":"exact"}],"termid":"GO:0010149"}


id: PBO:0011416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_using","termid":"PBO:0011416"}


id: SO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the inactivation of a catalytic site with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inactive_ligand_binding_site","termid":"SO:0001560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive_catalytic_site","synonyms":[{"name":"inactive catalytic site","type":"exact"}],"termid":"SO:0001618"}


id: GO:0010864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein histidine kinase activity","termid":"GO:0032110"},{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein histidine kinase activity","termid":"GO:0010864"}


id: SO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone modification.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_modification","synonyms":[{"name":"silenced by histone modification","type":"exact"}],"termid":"SO:0001221"}


id: PBO:0057955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3678","termid":"PBO:0057955"}


id: PBO:0044268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 8","termid":"PBO:0044268"}


id: GO:0044262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbohydrate metabolic process (obsolete GO:0044262)","synonyms":[{"name":"cellular carbohydrate metabolism","type":"exact"},{"name":"main pathways of carbohydrate metabolic process","type":"narrow"},{"name":"main pathways of carbohydrate metabolism","type":"narrow"}],"termid":"GO:0044262"}


id: PBO:0085674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in polar growth; functionally redundant with Boi1p; required for fusion of secretory vesicles with plasma membrane at sites of polarized growth and for inhibition of membrane abscission until the end of cytokinesis; interacts with bud-emergence protein Bem1p; contains an SH3 (src homology 3) domain and a PH (pleckstrin homology) domain; relocalizes from bud neck to cytoplasm upon DNA replication stress; BOI2 has a paralog, BOI1, that arose from the whole genome duplication","termid":"PBO:0085674"}


id: RO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a biological entity and a phenotype. Here a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature). The subject of this relationship can be an organism (where the organism has the phenotype, i.e. the qualities inhere in parts of this organism), a genomic entity such as a gene or genotype (if modifications of the gene or the genotype causes the phenotype), or a condition such as a disease (such that if the condition inheres in an organism, then the organism has the phenotype).","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_phenotype","termid":"RO:0002200"}


id: GO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"insulin receptor binding","synonyms":[{"name":"insulin receptor ligand","type":"narrow"}],"termid":"GO:0005158"}


id: PBO:0027397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_N2-guanine_methylation","termid":"PBO:0027397"}


id: PBO:0058006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3929","termid":"PBO:0058006"}


id: PBO:0069416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 678, pseudogene","termid":"PBO:0069416"}


id: PBO:0017629
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdt2 protein half-life 10-55 minutes","termid":"PBO:0017629"}


id: GO:0004349
data:
  {"annotated_genes":["SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69912],"is_not":false,"summary":null,"term":"GO:0004349"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP = L-glutamyl 5-phosphate + ADP + H+.","definition_xrefs":["EC:2.7.2.11","RHEA:14877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"glutamate 5-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00239","MetaCyc:GLUTKIN-RXN"],"synonyms":[{"name":"ATP-L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"ATP:L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"ATP:gamma-L-glutamate phosphotransferase activity","type":"related"},{"name":"gamma-glutamate kinase activity","type":"related"},{"name":"gamma-glutamyl kinase activity","type":"related"},{"name":"glutamate kinase activity","type":"related"}],"termid":"GO:0004349","terms_by_termid":{"GO:0004349":null}}


id: PBO:0028727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_organization_at_cell_tip","termid":"PBO:0028727"}


id: PBO:0073254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 6","termid":"PBO:0073254"}


id: GO:0015061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete red-sensitive opsin (obsolete GO:0015061)","synonyms":[{"name":"red-sensitive opsin","type":"exact"}],"termid":"GO:0015061"}


id: PBO:0069468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 733, pseudogene","termid":"PBO:0069468"}


id: GO:0045314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of compound eye photoreceptor development.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"part_of","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"regulates","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye photoreceptor development","synonyms":[{"name":"regulation of eye photoreceptor development","type":"broad"}],"termid":"GO:0045314"}


id: PBO:0034082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_serial_homology_relationship_with","termid":"PBO:0034082"}


id: GO:0061074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural retina development","termid":"GO:0061074"}


id: GO:0060163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which in the subpallium, the developmental fate of a cell becomes restricted such that it will develop into a neuron. The subpallium is the base region of the telencephalon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium neuron fate commitment","synonyms":[{"name":"subpallium neuronal precursor fate commitment","type":"related"}],"termid":"GO:0060163"}


id: GO:0052626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + ATP + amino acid = benzoyl amino acid conjugate + AMP + diphosphate.","definition_xrefs":["PMID:19189963","MetaCyc:RXN-10886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzoate amino acid synthetase activity","synonyms":[{"name":"benzoyl amino acid synthetase activity","type":"exact"}],"termid":"GO:0052626"}


id: PBO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB binding protein","termid":"PBO:0043878"}


id: PBO:0064869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 2","termid":"PBO:0064869"}


id: PBO:0080109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"utrophin","termid":"PBO:0080109"}


id: GO:0050544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"icosatetraenoic acid binding","termid":"GO:0050543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"arachidonic acid binding","synonyms":[{"name":"arachidonate binding","type":"exact"}],"termid":"GO:0050544"}


id: GO:1903875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticosterone.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:10802282","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"corticosterone binding","termid":"GO:1903875"}


id: GO:0030650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic metabolic process","synonyms":[{"name":"peptide antibiotic metabolism","type":"exact"}],"termid":"GO:0030650"}


id: PBO:0083159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the dubious ORF YBR056W-A","termid":"PBO:0083159"}


id: GO:2000095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"regulation of PCP pathway","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt-JNK signaling pathway","type":"related"},{"name":"regulation of Wnt-PCP signaling pathway","type":"related"},{"name":"regulation of Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of non-canonical Wnt signaling pathway","type":"related"}],"termid":"GO:2000095"}


id: PBO:0068577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 28, pseudogene","termid":"PBO:0068577"}


id: GO:0050727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response","termid":"GO:0050727"}


id: PR:000050475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047.","definition_xrefs":["PRO:DAN","PMID:12181336","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/Phos:(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"Spom-wis1/Phos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047","type":"narrow"},{"name":"wis1/Phos:(S469,T473)","type":"exact"}],"termid":"PR:000050475"}


id: PR:O74805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.14c","synonyms":[{"name":"Spom972h-myo51","type":"exact"},{"name":"myosin type V-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74805"}


id: CHEBI:37903
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl group","termid":"CHEBI:37903"}


id: PBO:0110267
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive amino acid Transporter","termid":"PBO:0110267"}


id: GO:0019689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine nucleoside is synthesized from another pyrimidine nucleoside.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside interconversion","termid":"GO:0019689"}


id: GO:0102574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxo-myristoyl-[acp] = 3-oxo-myristate + H+ + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-myristoyl-ACP hydrolase activity (obsolete GO:0102574)","secondary_identifiers":["MetaCyc:RXN-15280"],"termid":"GO:0102574"}


id: PBO:0087345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphinganine C4-hydroxylase; catalyses the conversion of sphinganine to phytosphingosine in sphingolipid biosyntheis","termid":"PBO:0087345"}


id: PBO:0042763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 57","termid":"PBO:0042763"}


id: FYPO:0003035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to ultraviolet light is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to UV","synonyms":[{"name":"normal RNA accumulation during cellular response to UV","type":"related"},{"name":"normal RNA level during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to UV","type":"narrow"},{"name":"normal protein level during cellular response to ultraviolet light","type":"exact"},{"name":"normal transcript level during cellular response to UV","type":"exact"}],"termid":"FYPO:0003035"}


id: PBO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flotillin 1","termid":"PBO:0047682"}


id: PBO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak2","termid":"PBO:0002325"}


id: PBO:0071596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 13","termid":"PBO:0071596"}


id: GO:0019934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic GMP (cGMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide-mediated signaling","termid":"GO:0019935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cGMP-mediated signaling","synonyms":[{"name":"cGMP-mediated signalling","type":"exact"}],"termid":"GO:0019934"}


id: GO:0055115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah","GOC:jid","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into diapause","secondary_identifiers":["Wikipedia:Diapause"],"termid":"GO:0055115"}


id: GO:0034058
data:
  {"annotated_genes":["SJAG_00204","SJAG_05184","SJAG_02315","SJAG_00380","SJAG_03347"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71119,74016,75903,78064,94812],"is_not":false,"summary":null,"term":"GO:0034058"}]},"cv_name":"biological_process","definition":"The homotypic fusion of endocytic vesicles to form or add to an early endosome.","definition_xrefs":["PMID:11964142","PMID:9422733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00380":null,"SJAG_02315":null,"SJAG_03347":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"endosomal vesicle fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosome vesicle fusion","type":"exact"}],"termid":"GO:0034058","terms_by_termid":{"GO:0034058":null}}


id: PBO:0034469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0034469"}


id: GO:0052025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host endomembrane system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell endomembrane system","synonyms":[{"name":"disruption by symbiont of host cell membrane","type":"broad"},{"name":"modification by symbiont of host cell membrane","type":"broad"},{"name":"symbiont-mediated disruption of host cell membrane","type":"broad"},{"name":"symbiont-mediated perturbation of host cell membrane","type":"broad"}],"termid":"GO:0052025"}


id: PBO:0073257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 1","termid":"PBO:0073257"}


id: GO:1903902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral life cycle.","definition_xrefs":["GOC:TermGenie","PMID:18005716","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"positively_regulates","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral life cycle","synonyms":[{"name":"activation of lytic viral life cycle","type":"related"},{"name":"activation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"activation of viral infectious cycle","type":"related"},{"name":"activation of viral life cycle","type":"narrow"},{"name":"activation of viral replication","type":"related"},{"name":"positive regulation of lytic viral life cycle","type":"related"},{"name":"positive regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"positive regulation of viral infectious cycle","type":"related"},{"name":"positive regulation of viral replication","type":"related"},{"name":"up regulation of lytic viral life cycle","type":"related"},{"name":"up regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"up regulation of viral infectious cycle","type":"related"},{"name":"up regulation of viral life cycle","type":"exact"},{"name":"up regulation of viral replication","type":"related"},{"name":"up-regulation of lytic viral life cycle","type":"related"},{"name":"up-regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"up-regulation of viral infectious cycle","type":"related"},{"name":"up-regulation of viral life cycle","type":"exact"},{"name":"up-regulation of viral replication","type":"related"},{"name":"upregulation of lytic viral life cycle","type":"related"},{"name":"upregulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"upregulation of viral infectious cycle","type":"related"},{"name":"upregulation of viral life cycle","type":"exact"},{"name":"upregulation of viral replication","type":"related"}],"termid":"GO:1903902"}


id: PBO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemojuvelin BMP co-receptor","termid":"PBO:0050008"}


id: PBO:0054817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2230","termid":"PBO:0054817"}


id: FYPO:0006761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to hydroxyurea. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription during cellular response to hydroxyurea","synonyms":[{"name":"increased transcription during cellular response to HU","type":"exact"},{"name":"increased transcription during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased transcription in response to HU","type":"exact"},{"name":"increased transcription in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006761"}


id: PBO:0052690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 14","termid":"PBO:0052690"}


id: PBO:0077049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor beta","termid":"PBO:0077049"}


id: GO:0071070
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to thrombospondin-2.","definition_xrefs":["PMID:11980922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta1 integrin-thrombospondin-2 complex","synonyms":[{"name":"ITGA4-ITGB1-THBS2 complex","type":"narrow"}],"termid":"GO:0071070"}


id: PBO:0027942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II-regulated_genes_during_vegetative_growth","termid":"PBO:0027942"}


id: GO:0060239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of signal transduction involved in conjugation with cellular fusion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0000747"],"is_obsolete":false,"name":"positive regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060239"}


id: GO:2000592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric DCT cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric DCT cell differentiation","synonyms":[{"name":"regulation of metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:2000592"}


id: GO:0060685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of prostatic bud formation, the morphogenetic process in which a region of the fetal urogenital sinus epithelium is specified to become the prostate, resulting in prostate bud outgrowth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of prostatic bud formation","termid":"GO:0060685"}


id: PBO:0041168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG3 antisense RNA 1","termid":"PBO:0041168"}


id: PBO:0068932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 175, pseudogene","termid":"PBO:0068932"}


id: PBO:0085019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinamide riboside kinase; catalyzes the phosphorylation of nicotinamide riboside and nicotinic acid riboside in salvage pathways for NAD+ biosynthesis","termid":"PBO:0085019"}


id: PBO:0062619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Y member 1 pseudogene","termid":"PBO:0062619"}


id: GO:0075027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of appressorium initiation (obsolete GO:0075027)","synonyms":[{"name":"positive regulation of appressorium initiation on or near host","type":"related"},{"name":"positive regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075027"}


id: PBO:0075838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSTR5 antisense RNA 1","termid":"PBO:0075838"}


id: PBO:0068294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 3","termid":"PBO:0068294"}


id: GO:0033660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"modulation by symbiont of host resistance gene-dependent defense response","termid":"GO:0052158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host resistance gene-dependent defense response","synonyms":[{"name":"down regulation by symbiont of defense response in host by specific elicitors","type":"exact"},{"name":"down-regulation by symbiont of host gene-for-gene resistance","type":"exact"},{"name":"downregulation by symbiont of pathogen-race/host plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"inhibition by symbiont of host resistance gene-dependent defense response","type":"narrow"},{"name":"negative regulation by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"suppression by symbiont of host resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0033660"}


id: GO:0034603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + NAD(P)+ = acetyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase activity","termid":"GO:0004738"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyruvate dehydrogenase [NAD(P)+] activity","termid":"GO:0034603"}


id: FYPO:0006833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis  begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah","GO:0031671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal onset of primary cell septum biogenesis","synonyms":[{"name":"normal onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"normal onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"normal onset of primary cell septum formation","type":"exact"},{"name":"normal onset of primary septum biogenesis","type":"exact"},{"name":"normal onset of primary septum synthesis","type":"related"},{"name":"normal timing of primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006833"}


id: GO:0100050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates mating type switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating type switching by transcription from RNA polymerase II promoter (obsolete GO:0100050)","termid":"GO:0100050"}


id: PBO:0066512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X8","termid":"PBO:0066512"}


id: PBO:0061116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 7","termid":"PBO:0061116"}


id: PBO:0031309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation","termid":"PBO:0031309"}


id: PBO:0051230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-28-1 (pseudogene)","termid":"PBO:0051230"}


id: GO:0004439
data:
  {"annotated_genes":["SJAG_00063","SJAG_04545","SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73199,74227,74556],"is_not":false,"summary":null,"term":"GO:0004439"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate.","definition_xrefs":["RHEA:22764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"},{"relation_name":"is_a","term_name":"phosphatidylinositol-4,5-bisphosphate phosphatase activity","termid":"GO:0106019"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN","Reactome:R-HSA-1675824","EC:3.1.3.36","Reactome:R-HSA-8868648","Reactome:R-HSA-1676177","GO:0001668","KEGG_REACTION:R04404"],"synonyms":[{"name":"PI(4,5)P2 5-phosphatase activity","type":"exact"},{"name":"PtdIns(4,5)P(2) 5-phosphatase activity","type":"related"},{"name":"PtdIns(4,5)P2 5-phosphatase activity","type":"related"},{"name":"phosphatidyl-myo-inositol-4,5-bisphosphate phosphatase activity","type":"related"},{"name":"phosphatidylinositol 4,5-bisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol-bisphosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphomonoesterase activity","type":"broad"}],"termid":"GO:0004439","terms_by_termid":{"GO:0004439":null}}


id: GO:0100047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates inositol biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100047)","termid":"GO:0100047"}


id: GO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane, is directly or indirectly linked to the nuclear membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear matrix organization","termid":"GO:0043578"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear matrix anchoring at nuclear membrane","synonyms":[{"name":"nucleoskeleton anchoring at nuclear membrane","type":"exact"}],"termid":"GO:0090292"}


id: PBO:0015679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Ecm14 (predicted)","termid":"PBO:0015679"}


id: PBO:0047852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p21.2)","termid":"PBO:0047852"}


id: GO:0018443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-aspartic acid to form L-aspartic 4-phosphoric anhydride.","definition_xrefs":["RESID:AA0033"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-aspartic 4-phosphoric anhydride (obsolete GO:0018443)","termid":"GO:0018443"}


id: PBO:0086540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR001W is not an essential gene","termid":"PBO:0086540"}


id: FYPO:0002494
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114390,114382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[114389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[114292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[114381,114385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[114325],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[114378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[114375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein modification is abnormal. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":7,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein modification","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_04551","SJAG_00610","SJAG_02592","SJAG_03940","SJAG_04697"],"single_locus_genotype_uniquenames":["sty1delta","pck1delta","gms1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta","nem2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0002494","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0072884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 2","termid":"PBO:0072884"}


id: PBO:0054743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2152","termid":"PBO:0054743"}


id: FYPO:0003100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type) in regions containing protein-coding genes. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","GO:0031507","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal heterochromatin assembly","termid":"FYPO:0003099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal heterochromatin assembly at protein coding gene","synonyms":[{"name":"normal heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"normal heterochromatin assembly at protein-coding gene","type":"exact"},{"name":"normal heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0003100"}


id: PBO:0084594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL012C-A was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL012C/VTC4","termid":"PBO:0084594"}


id: PATO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved lateral","termid":"PATO:0001649"}


id: GO:0035028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"leading edge cell fate commitment","termid":"GO:0035027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate determination","termid":"GO:0035028"}


id: PBO:0056182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFG antisense RNA 1","termid":"PBO:0056182"}


id: PBO:0011117
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE domain recruiting","termid":"PBO:0011117"}


id: CHEBI:16761
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP","termid":"CHEBI:16761"}


id: PBO:0089267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2","termid":"PBO:0089267"}


id: PBO:0084006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycine-tRNA synthetase, not expressed under normal growth conditions; expression is induced under heat, oxidative, pH, or ethanol stress conditions; more stable than the major glycine-tRNA synthetase Grs1p at 37 deg C; GRS2 has a paralog, GRS1, that arose from the whole genome duplication","termid":"PBO:0084006"}


id: FYPO:0003041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of small nuclear RNA (snRNA) primary transcripts is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA splicing","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased snRNA splicing","synonyms":[{"name":"decreased snRNA primary transcript RNA splicing","type":"exact"},{"name":"decreased snRNA splicing during mitotic cell cycle","type":"related"},{"name":"decreased snRNA splicing during vegetative growth","type":"exact"},{"name":"increased snRNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"},{"name":"reduced snRNA splicing","type":"exact"}],"termid":"FYPO:0003041"}


id: PBO:0018092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Coa5 (predicted)","termid":"PBO:0018092"}


id: PBO:0073320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 3","termid":"PBO:0073320"}


id: GO:0042868
data:
  {"annotated_genes":["SJAG_01176","SJAG_03047","SJAG_04574","SJAG_03680","SJAG_01717","SJAG_03745","SJAG_02621","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103152],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060195"},{"annotations":[105612,97670,101468,113054,70549,109067,83931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA metabolic process","termid":"GO:0034660"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01176":null,"SJAG_01717":null,"SJAG_02621":null,"SJAG_03047":null,"SJAG_03680":null,"SJAG_03745":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antisense RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"antisense RNA metabolism","type":"exact"}],"termid":"GO:0042868","terms_by_termid":{"GO:0060195":null,"GO:0071040":null}}


id: GO:0097705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to pulsatile fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","PMID:21768538","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to pulsatile fluid shear stress","termid":"GO:0097703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to pulsatile fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to pulsatile fluid shear stress","type":"exact"}],"termid":"GO:0097705"}


id: PBO:0053971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1282","termid":"PBO:0053971"}


id: PBO:0070256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear","termid":"PBO:0070256"}


id: PBO:0089783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP II complex subunit Trs130","termid":"PBO:0089783"}


id: PBO:0083061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoamide dehydrogenase; the lipoamide dehydrogenase component (E3) of the pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase multi-enzyme complexes; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes; LPD1 has a paralog, IRC15, that arose from the whole genome duplication","termid":"PBO:0083061"}


id: PR:O94378
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A MAP7 domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.12","secondary_identifiers":["UniProtKB:O94378"],"synonyms":[{"name":"Spom972h-MAP7D1","type":"exact"}],"termid":"PR:O94378"}


id: GO:1903529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dCDP biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:16317005","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900398"},{"relation_name":"is_a","term_name":"regulation of dCDP biosynthetic process","termid":"GO:1903528"},{"relation_name":"negatively_regulates","term_name":"dCDP biosynthetic process","termid":"GO:0006240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dCDP biosynthetic process","synonyms":[{"name":"down regulation of dCDP anabolism","type":"exact"},{"name":"down regulation of dCDP biosynthesis","type":"exact"},{"name":"down regulation of dCDP biosynthetic process","type":"exact"},{"name":"down regulation of dCDP formation","type":"exact"},{"name":"down regulation of dCDP synthesis","type":"exact"},{"name":"down-regulation of dCDP anabolism","type":"exact"},{"name":"down-regulation of dCDP biosynthesis","type":"exact"},{"name":"down-regulation of dCDP biosynthetic process","type":"exact"},{"name":"down-regulation of dCDP formation","type":"exact"},{"name":"down-regulation of dCDP synthesis","type":"exact"},{"name":"downregulation of dCDP anabolism","type":"exact"},{"name":"downregulation of dCDP biosynthesis","type":"exact"},{"name":"downregulation of dCDP biosynthetic process","type":"exact"},{"name":"downregulation of dCDP formation","type":"exact"},{"name":"downregulation of dCDP synthesis","type":"exact"},{"name":"inhibition of dCDP anabolism","type":"narrow"},{"name":"inhibition of dCDP biosynthesis","type":"narrow"},{"name":"inhibition of dCDP biosynthetic process","type":"narrow"},{"name":"inhibition of dCDP formation","type":"narrow"},{"name":"inhibition of dCDP synthesis","type":"narrow"},{"name":"negative regulation of dCDP anabolism","type":"exact"},{"name":"negative regulation of dCDP biosynthesis","type":"exact"},{"name":"negative regulation of dCDP formation","type":"exact"},{"name":"negative regulation of dCDP synthesis","type":"exact"}],"termid":"GO:1903529"}


id: FYPO:0004765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal cell population growth during glucose starvation","synonyms":[{"name":"normal cell population growth during glucose depletion","type":"exact"},{"name":"normal cell population growth during glucose deprivation","type":"exact"},{"name":"normal cell population growth during glucose limitation","type":"related"},{"name":"normal growth during glucose starvation","type":"broad"}],"termid":"FYPO:0004765"}


id: PBO:0090815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP6 regulatory subunit Ekc1","termid":"PBO:0090815"}


id: PBO:0029578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0029578"}


id: GO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin 4.","definition_xrefs":["EC:2.1.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"precorrin-3B C17-methyltransferase activity","secondary_identifiers":["RHEA:12761","MetaCyc:2.1.1.131-RXN"],"synonyms":[{"name":"CobJ","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-3B C17-methyltransferase activity","type":"related"},{"name":"precorrin-3 methylase activity","type":"related"},{"name":"precorrin-3 methyltransferase activity","type":"related"}],"termid":"GO:0030789"}


id: GO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a regulatory subunit of phosphatidylinositol 3-kinase. The regulatory subunit associates with the catalytic subunit to regulate both its activity and subcellular location.","definition_xrefs":["GOC:bf","PMID:20505341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase regulatory subunit binding","synonyms":[{"name":"PI3K regulatory subunit binding","type":"exact"},{"name":"p85 binding","type":"related"}],"termid":"GO:0036312"}


id: PBO:0073452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 1","termid":"PBO:0073452"}


id: GO:0006709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone catabolic process","termid":"GO:0008208"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"progesterone metabolic process","termid":"GO:0042448"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"progesterone catabolic process","synonyms":[{"name":"progesterone breakdown","type":"exact"},{"name":"progesterone catabolism","type":"exact"},{"name":"progesterone degradation","type":"exact"}],"termid":"GO:0006709"}


id: PBO:0108950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL pseudogene 2","termid":"PBO:0108950"}


id: PBO:0067287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 370, pseudogene","termid":"PBO:0067287"}


id: MOD:00160
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-glycosyl-L-asparagine.","definition_xrefs":["RESID:AA0151#var","PubMed:111247","PubMed:1694179","PubMed:5490222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-glycosyl-L-asparagine","synonyms":[{"name":"N4GlycoAsn","type":"exact"}],"termid":"MOD:00160"}


id: PBO:0078587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60","termid":"PBO:0078587"}


id: GO:0009237
data:
  {"annotated_genes":["SJAG_04031","SJAG_00469","SJAG_00792","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89517,89509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[89474],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[100604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"siderophore metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"siderochrome metabolic process","type":"narrow"},{"name":"siderochrome metabolism","type":"narrow"},{"name":"siderophore metabolism","type":"exact"}],"termid":"GO:0009237","terms_by_termid":{"GO:0019290":null,"GO:0031169":null,"GO:1905569":null}}


id: PBO:0028020
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0028020"}


id: PBO:0087667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner ring of the nuclear pore complex (NPC); contributes to NPC assembly and tethering of DNA to the nuclear periphery; both Nup170p and NUP157p are similar to human Nup155p; NUP157 has a paralog, NUP170, that arose from the whole genome duplication","termid":"PBO:0087667"}


id: GO:0030363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity required for the process of mRNA cleavage.","definition_xrefs":["GOC:mah","PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-mRNA cleavage factor activity (obsolete GO:0030363)","synonyms":[{"name":"pre-mRNA cleavage factor activity","type":"exact"}],"termid":"GO:0030363"}


id: PBO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 43","termid":"PBO:0042760"}


id: PBO:0082536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth","termid":"PBO:0082536"}


id: GO:1902988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a neurofibrillary tangle.","definition_xrefs":["GO_REF:0000079","GOC:sjp","PMID:22986780","PMID:24154541","GOC:TermGenie","PMID:15897157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"neurofibrillary tangle assembly","synonyms":[{"name":"flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"neurofibrillary tangle formation","type":"exact"},{"name":"star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902988"}


id: GO:0008401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of retinoic acid to 4-hydroxy-retinoic acid.","definition_xrefs":["PMID:9250660","PMID:19519282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"retinoic acid 4-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-5602063","Reactome:R-HSA-211874","Reactome:R-HSA-211923","Reactome:R-HSA-5602050","Reactome:R-HSA-212007","Reactome:R-HSA-5362525"],"synonyms":[{"name":"cytochrome P450 CYP261","type":"narrow"}],"termid":"GO:0008401"}


id: GO:0005070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68).","definition_xrefs":["GOC:mah","GOC:so"],"gene_count":0,"genotype_count":0,"name":"obsolete SH3/SH2 adaptor activity (obsolete GO:0005070)","synonyms":[{"name":"SH3/SH2 adaptor protein activity","type":"narrow"}],"termid":"GO:0005070"}


id: GO:0018025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + calmodulin L-lysine = S-adenosyl-L-homocysteine + calmodulin N6-methyl-L-lysine.","definition_xrefs":["EC:2.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016740","GO:0008276","GO:0016741"],"is_obsolete":false,"name":"calmodulin-lysine N-methyltransferase activity","secondary_identifiers":["RHEA:21556","MetaCyc:2.1.1.60-RXN","Reactome:R-HSA-6786205"],"synonyms":[{"name":"S-adenosyl-L-methionine:calmodulin-L-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:calmodulin-L-lysine N6-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:calmodulin (lysine) N-methyltransferase activity","type":"related"}],"termid":"GO:0018025"}


id: GO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate + Na+(out) => ATP + H2O + Na+(in), by a rotational mechanism.","definition_xrefs":["RHEA:58158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0022857","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"sodium-transporting ATP synthase activity, rotational mechanism","secondary_identifiers":["EC:7.2.2.1","MetaCyc:3.6.3.15-RXN","RHEA:58156","TC:3.A.2.1.2"],"synonyms":[{"name":"sodium-translocating F-type ATPase activity","type":"exact"},{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0046932"}


id: GO:0009258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"10-formyltetrahydrofolate metabolic process","termid":"GO:0009256"},{"relation_name":"is_a","term_name":"folic acid-containing compound catabolic process","termid":"GO:0009397"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"10-formyltetrahydrofolate catabolic process","synonyms":[{"name":"10-formyl-THF catabolic process","type":"exact"},{"name":"10-formyl-THF catabolism","type":"exact"},{"name":"10-formyltetrahydrofolate breakdown","type":"exact"},{"name":"10-formyltetrahydrofolate catabolism","type":"exact"},{"name":"10-formyltetrahydrofolate degradation","type":"exact"}],"termid":"GO:0009258"}


id: GO:1990861
data:
  {"annotated_genes":["SJAG_02663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77471],"is_not":false,"summary":null,"term":"GO:1990861"}]},"cv_name":"cellular_component","definition":"A protein complex that cleaves ubiquitin from specific substrates. In the budding yeast Saccharomyces cerevisiae, this complex consists of Ubp3p and Bre5p.","definition_xrefs":["GOC:rb","PMID:12778054","PMID:18391941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ubp3-Bre5 deubiquitination complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Ubp3-Bre5 ubiquitin protease complex","type":"exact"}],"termid":"GO:1990861","terms_by_termid":{"GO:1990861":null}}


id: PBO:0083733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential beta'-coat protein of the COPI coatomer; involved in ER-to-Golgi and Golgi-to-ER transport; contains WD40 domains that mediate cargo selective interactions; 45% sequence identity to mammalian beta'-COP","termid":"PBO:0083733"}


id: PBO:0066511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X7","termid":"PBO:0066511"}


id: GO:0061583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colon epithelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"is_a","term_name":"colon epithelial cell migration","termid":"GO:0061580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon epithelial cell chemotaxis","termid":"GO:0061583"}


id: PBO:0017732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transmembrane transporter Atm1","termid":"PBO:0017732"}


id: GO:0002918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of B cell anergy","termid":"GO:0002671"},{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell anergy","termid":"GO:0002917"},{"relation_name":"negatively_regulates","term_name":"peripheral B cell anergy","termid":"GO:0002453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral B cell anergy","synonyms":[{"name":"down regulation of peripheral B cell anergy","type":"exact"},{"name":"down-regulation of peripheral B cell anergy","type":"exact"},{"name":"downregulation of peripheral B cell anergy","type":"exact"},{"name":"inhibition of peripheral B cell anergy","type":"narrow"}],"termid":"GO:0002918"}


id: PBO:0048504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 5","termid":"PBO:0048504"}


id: PBO:0017066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111 (predicted)","termid":"PBO:0017066"}


id: PBO:0049874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic and glial cell adhesion molecule","termid":"PBO:0049874"}


id: GO:0075104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont calcium or calmodulin-mediated signal transduction (obsolete GO:0075104)","synonyms":[{"name":"positive regulation by host of symbiont Ca++ or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075104"}


id: PBO:0064376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 1, mismatch repair system component","termid":"PBO:0064376"}


id: PR:Q9Y7X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ish1 gene.","definition_xrefs":["UniProtKB:Q9Y7X6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein ish1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.12c","synonyms":[{"name":"Spom972h-ish1","type":"exact"}],"termid":"PR:Q9Y7X6"}


id: PBO:0040618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-cell acute lymphoblastic leukemia associated long RNA 6","termid":"PBO:0040618"}


id: PBO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit beta 1","termid":"PBO:0052601"}


id: GO:0052332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a cellular membrane of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of membrane in other organism involved in symbiotic interaction (obsolete GO:0052332)","synonyms":[{"name":"modification by organism of cell membrane in other organism during symbiotic interaction","type":"related"},{"name":"modification by organism of cell membrane in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052332"}


id: SO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pyrimidine rich sequence near the 3' end of an intron to which the 5'end becomes covalently bound during nuclear splicing. The resulting structure resembles a lariat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branch_site","synonyms":[{"name":"branch point","type":"exact"},{"name":"branch site","type":"exact"},{"name":"branch_point","type":"exact"}],"termid":"SO:0000611"}


id: PBO:0076050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 4","termid":"PBO:0076050"}


id: SO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes in frame elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_N_terminal","termid":"SO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_in_frame_polypeptide_N_terminal_elongation","synonyms":[{"name":"elongated in frame polypeptide N terminal","type":"exact"}],"termid":"SO:0001614"}


id: GO:0021696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cranial nerves are generated and organized. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellum morphogenesis","termid":"GO:0021587"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}


id: GO:0050282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + H2O + NAD+ = 3-hydroxypyruvate + NH3 + NADH.","definition_xrefs":["MetaCyc:SERINE-DEHYDROGENASE-RXN","EC:1.4.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"serine 2-dehydrogenase activity","secondary_identifiers":["RHEA:20884"],"synonyms":[{"name":"L-serine:NAD oxidoreductase (deaminating) activity","type":"related"},{"name":"L-serine:NAD+ 2-oxidoreductase (deaminating)","type":"related"},{"name":"serine dehydrogenase activity","type":"exact"}],"termid":"GO:0050282"}


id: PBO:0051456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-35 (pseudogene)","termid":"PBO:0051456"}


id: PBO:0053704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 906","termid":"PBO:0053704"}


id: GO:0009269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to desiccation","synonyms":[{"name":"desiccation tolerance","type":"related"}],"termid":"GO:0009269"}


id: GO:0019414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An aerobic respiration process in which a sulfur-containing molecule (hydrogen sulfide, sulfur, sulfite, thiosulfate, and various polythionates) is oxidized.","definition_xrefs":["PMID:11425697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using sulfur or sulfate as electron donor","synonyms":[{"name":"aerobic respiration, using sulphur or sulphate as electron donor","type":"exact"}],"termid":"GO:0019414"}


id: PBO:0091950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase jmj4","termid":"PBO:0091950"}


id: GO:1900624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of monocyte aggregation","synonyms":[{"name":"down regulation of monocyte aggregation","type":"exact"},{"name":"down regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"down-regulation of monocyte aggregation","type":"exact"},{"name":"down-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"downregulation of monocyte aggregation","type":"exact"},{"name":"downregulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"inhibition of monocyte aggregation","type":"narrow"},{"name":"inhibition of mononuclear phagocyte aggregation","type":"exact"},{"name":"negative regulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900624"}


id: PBO:0090416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress transcription coactivator/ribosome recycling protein Oxs1","termid":"PBO:0090416"}


id: FYPO:0007730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007730"}


id: GO:1902499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:24069405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein ubiquitination","termid":"GO:0031398"},{"relation_name":"is_a","term_name":"regulation of protein autoubiquitination","termid":"GO:1902498"},{"relation_name":"positively_regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein autoubiquitination","synonyms":[{"name":"activation of protein auto-ubiquitination","type":"narrow"},{"name":"activation of protein auto-ubiquitinylation","type":"narrow"},{"name":"activation of protein autoubiquitination","type":"narrow"},{"name":"activation of protein autoubiquitinylation","type":"narrow"},{"name":"activation of protein self-ubiquitination","type":"narrow"},{"name":"activation of protein self-ubiquitinylation","type":"narrow"},{"name":"positive regulation of protein auto-ubiquitination","type":"exact"},{"name":"positive regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"positive regulation of protein autoubiquitinylation","type":"exact"},{"name":"positive regulation of protein self-ubiquitination","type":"exact"},{"name":"positive regulation of protein self-ubiquitinylation","type":"exact"},{"name":"up regulation of protein auto-ubiquitination","type":"exact"},{"name":"up regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"up regulation of protein autoubiquitination","type":"exact"},{"name":"up regulation of protein autoubiquitinylation","type":"exact"},{"name":"up regulation of protein self-ubiquitination","type":"exact"},{"name":"up regulation of protein self-ubiquitinylation","type":"exact"},{"name":"up-regulation of protein auto-ubiquitination","type":"exact"},{"name":"up-regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"up-regulation of protein autoubiquitination","type":"exact"},{"name":"up-regulation of protein autoubiquitinylation","type":"exact"},{"name":"up-regulation of protein self-ubiquitination","type":"exact"},{"name":"up-regulation of protein self-ubiquitinylation","type":"exact"},{"name":"upregulation of protein auto-ubiquitination","type":"exact"},{"name":"upregulation of protein auto-ubiquitinylation","type":"exact"},{"name":"upregulation of protein autoubiquitination","type":"exact"},{"name":"upregulation of protein autoubiquitinylation","type":"exact"},{"name":"upregulation of protein self-ubiquitination","type":"exact"},{"name":"upregulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1902499"}


id: GO:0060260
data:
  {"annotated_genes":["SJAG_02849","SJAG_05203","SJAG_00909","SJAG_04705","SJAG_03622","SJAG_01952","SJAG_02391","SJAG_04647","SJAG_00904","SJAG_03573","SJAG_05341","SJAG_04820","SJAG_01403","SJAG_00150","SJAG_02551","SJAG_01771","SJAG_04099","SJAG_02494","SJAG_00297","SJAG_03061","SJAG_00342","SJAG_03590"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85219,101439,113864,91240,98664,98931,103917,94002,103889,109784,86169,83029,89849,110336,101248,101574,97227,90763,104196,94350,89739,85865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:tb","GOC:dph","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060260","terms_by_termid":{"GO:0060261":null}}


id: RO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_quality","termid":"RO:0000086"}


id: PBO:0043925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 4","termid":"PBO:0043925"}


id: PBO:0053193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 1 pseudogene 1","termid":"PBO:0053193"}


id: GO:0090440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of abscisic acid from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"},{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"abscisic acid transmembrane transporter activity","synonyms":[{"name":"abscisic acid transporter activity","type":"exact"}],"termid":"GO:0090440"}


id: GO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that connect growing stereocilia in developing cochlear hair cells, composed of Vlgr1, usherin, vezatin, and whirlin.","definition_xrefs":["PMID:16775142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"stereocilia ankle link","termid":"GO:0002141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"stereocilia ankle link complex","termid":"GO:0002142"}


id: GO:0044357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of rRNA molecules to degradation. Includes processes that both stabilize and destabilize rRNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of rRNA catabolic process","termid":"GO:1902374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA stability","synonyms":[{"name":"regulation of ribosomal RNA stability","type":"exact"}],"termid":"GO:0044357"}


id: PR:Q10134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.01","synonyms":[{"name":"Gaf-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fep1","type":"exact"},{"name":"transcription factor gaf2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10134"}


id: MOD:00969
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAM-Cys vs PAM-Cys","termid":"MOD:00969"}


id: PBO:0088688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, implicated in vesicle trafficking or lipid metabolism","termid":"PBO:0088688"}


id: PBO:0085063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec66p","termid":"PBO:0085063"}


id: GO:0102730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cathasterone + O2 + a reduced electron acceptor = teasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cathasterone hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-716"],"termid":"GO:0102730"}


id: PBO:0000827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0000827"}


id: PATO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the axis of an organism.","definition_xrefs":["PATOC:EH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalized adaxially","termid":"PATO:0002396"}


id: GO:0010550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the chemical reactions and pathways resulting in the breakdown of one or more components of the light-harvesting complex of photosystem II.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"regulates","term_name":"PSII associated light-harvesting complex II catabolic process","termid":"GO:0010304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of PSII associated light-harvesting complex II catabolic process","synonyms":[{"name":"regulation of LHCII catabolism","type":"exact"},{"name":"regulation of LHCII degradation","type":"exact"}],"termid":"GO:0010550"}


id: PBO:0043200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemokine like factor","termid":"PBO:0043200"}


id: PBO:0060569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 5, pseudogene","termid":"PBO:0060569"}


id: GO:0048743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:mtg_muscle","GOC:dph","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber development","termid":"GO:0048742"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle fiber development","synonyms":[{"name":"activation of skeletal muscle fiber development","type":"narrow"},{"name":"positive regulation of skeletal muscle fibre development","type":"exact"},{"name":"positive regulation of skeletal myofiber development","type":"exact"},{"name":"positive regulation of skeletal myofibre development","type":"exact"},{"name":"stimulation of skeletal muscle fiber development","type":"narrow"},{"name":"up regulation of skeletal muscle fiber development","type":"exact"},{"name":"up-regulation of skeletal muscle fiber development","type":"exact"},{"name":"upregulation of skeletal muscle fiber development","type":"exact"}],"termid":"GO:0048743"}


id: PBO:0055947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 56","termid":"PBO:0055947"}


id: FYPO:0005908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is lower than normal (i.e. lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of cellular response to stress gene mRNA during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"decreased mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"decreased stress responsive gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of stress responsive gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005908"}


id: FYPO:0002697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased methylenetetrahydrofolate reductase (NADPH) activity","synonyms":[{"name":"reduced methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"}],"termid":"FYPO:0002697"}


id: PR:O74762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03658","PANTHER:PTHR10943:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.07c","secondary_identifiers":["UniProtKB:O74762"],"synonyms":[{"name":"Spom972h-PSMD1","type":"exact"}],"termid":"PR:O74762"}


id: PBO:0088537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit H","termid":"PBO:0088537"}


id: GO:0072344
data:
  {"annotated_genes":["SJAG_03189","SJAG_00188","SJAG_02746","SJAG_01497","SJAG_00898","SJAG_01074","SJAG_02096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69793,75495,76853,87316,98381,111120],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[109475],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"A process of translational elongation that takes place when a ribosome has stalled during translation, and results in freeing the ribosome from the stalled translation complex.","definition_xrefs":["PMID:19170872","GOC:mah","PMID:18557701","GOC:jh2","PMID:20117091","PMID:20185543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"ribosome disassembly","termid":"GO:0032790"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"rescue of stalled ribosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072344","terms_by_termid":{"GO:0072344":null,"GO:0140708":null}}


id: GO:1904861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an excitatory synapse.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","PMID:21670302","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"excitatory synapse assembly","synonyms":[{"name":"excitatory synapse formation","type":"exact"}],"termid":"GO:1904861"}


id: PBO:0055867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich pentatricopeptide repeat containing","termid":"PBO:0055867"}


id: PBO:0079859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B8 (pseudogene)","termid":"PBO:0079859"}


id: PBO:0018219
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siderophore TRansporter","termid":"PBO:0018219"}


id: PBO:0080987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 3","termid":"PBO:0080987"}


id: PBO:0028070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_aseptate_mononucleate_cell","termid":"PBO:0028070"}


id: GO:1905884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of triglyceride transport.","definition_xrefs":["GO_REF:0000058","PMID:25849533","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acylglycerol transport","termid":"GO:1901507"},{"relation_name":"is_a","term_name":"regulation of triglyceride transport","termid":"GO:1905883"},{"relation_name":"negatively_regulates","term_name":"triglyceride transport","termid":"GO:0034197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride transport","synonyms":[{"name":"down regulation of triacylglycerol transport","type":"exact"},{"name":"down regulation of triglyceride transport","type":"exact"},{"name":"down-regulation of triacylglycerol transport","type":"exact"},{"name":"down-regulation of triglyceride transport","type":"exact"},{"name":"downregulation of triacylglycerol transport","type":"exact"},{"name":"downregulation of triglyceride transport","type":"exact"},{"name":"inhibition of triacylglycerol transport","type":"narrow"},{"name":"inhibition of triglyceride transport","type":"narrow"},{"name":"negative regulation of triacylglycerol transport","type":"exact"}],"termid":"GO:1905884"}


id: MOD:00909
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-histidine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-histidine residue","synonyms":[{"name":"ModHis","type":"exact"}],"termid":"MOD:00909"}


id: GO:0021858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic inhibitory neuron in the basal ganglia. Differentiation includes the processes involved in commitment of a neuroblast to a GABAergic neuron.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","PMID:16226447","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"GABAergic neuron differentiation in basal ganglia","termid":"GO:0021858"}


id: PBO:0110051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tranlagtion factor Sls1","termid":"PBO:0110051"}


id: PBO:0072970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1C member 2","termid":"PBO:0072970"}


id: PBO:0058782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7151","termid":"PBO:0058782"}


id: MOD:00519
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)Pent(1)","type":"related"},{"name":"Hex1HexNAc2Pent1","type":"related"}],"termid":"MOD:00519"}


id: GO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a trace amine to initiate a change in cell activity. Trace amines are biogenic amines that are synthesized from aromatic amino acids and are substrates for monoamine oxidase, and are therefore detectable only at trace levels in mammals.","definition_xrefs":["GOC:mah","PMID:19325074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"trace-amine receptor activity","termid":"GO:0001594"}


id: GO:1902444
data:
  {"annotated_genes":["SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105507],"is_not":false,"summary":null,"term":"GO:1902444"}]},"cv_name":"molecular_function","definition":"Binding to riboflavin.","definition_xrefs":["PMID:12083520","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"riboflavin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902444","terms_by_termid":{"GO:1902444":null}}


id: PBO:0038351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_positive_regulatory_component_activity","termid":"PBO:0038351"}


id: GO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of initial connective tissue surrounding cartilage into bone.","definition_xrefs":["PMID:21901110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bone morphogenesis","termid":"GO:0061973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perichondral bone morphogenesis","termid":"GO:0061974"}


id: GO:1902207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["PMID:11909529","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-2-mediated signaling pathway","termid":"GO:1902205"},{"relation_name":"positively_regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"activation of IL-2-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-2-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-2-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902207"}


id: PBO:0028355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity","termid":"PBO:0028355"}


id: PBO:0090840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like","termid":"PBO:0090840"}


id: PBO:0080884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N6-threonylcarbamoyltransferase domain containing","termid":"PBO:0080884"}


id: GO:1904667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:dph","GOC:TermGenie","GOC:tb","PMID:26216882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ubiquitin-protein transferase activity","termid":"GO:0051444"},{"relation_name":"is_a","term_name":"regulation of ubiquitin protein ligase activity","termid":"GO:1904666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:0060564","GO:1904190"],"synonyms":[{"name":"down regulation of E3","type":"related"},{"name":"down regulation of protein ubiquitination activity","type":"exact"},{"name":"down regulation of ubiquitin ligase activity","type":"exact"},{"name":"down regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"down-regulation of E3","type":"related"},{"name":"down-regulation of protein ubiquitination activity","type":"exact"},{"name":"down-regulation of ubiquitin ligase activity","type":"exact"},{"name":"down-regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"downregulation of E3","type":"related"},{"name":"downregulation of protein ubiquitination activity","type":"exact"},{"name":"downregulation of ubiquitin ligase activity","type":"exact"},{"name":"downregulation of ubiquitin protein ligase activity","type":"exact"},{"name":"inhibition of E3","type":"related"},{"name":"inhibition of protein ubiquitination activity","type":"narrow"},{"name":"inhibition of ubiquitin ligase activity","type":"narrow"},{"name":"inhibition of ubiquitin protein ligase activity","type":"narrow"},{"name":"negative regulation of APC activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of APC-Cdc20 complex activity","type":"narrow"},{"name":"negative regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"negative regulation of APC/C activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of E3","type":"related"},{"name":"negative regulation of anaphase-promoting complex activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of cyclosome activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of mitotic anaphase-promoting complex activity","type":"related"},{"name":"negative regulation of protein ubiquitination activity","type":"exact"},{"name":"negative regulation of ubiquitin ligase activity","type":"exact"}],"termid":"GO:1904667"}


id: GO:0103062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP(4-) + H2O + a cis-keto-C60-meroacyl-[acp] = diphosphoric acid + a cis-keto-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["EC:6.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"cis-keto-C60-meroacyl-AMP ligase activity","secondary_identifiers":["MetaCyc:RXN1G-4142"],"termid":"GO:0103062"}


id: PBO:0083933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p); CLN1 has a paralog, CLN2, that arose from the whole genome duplication; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083933"}


id: PR:O42659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apc14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.05c","synonyms":[{"name":"20S cyclosome/APC complex protein apc14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-apc14","type":"exact"},{"name":"overlapping meiotic transcript protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42659"}


id: PBO:0039658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit alpha 2","termid":"PBO:0039658"}


id: PBO:0074973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-15","termid":"PBO:0074973"}


id: PR:O74310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.05 gene.","definition_xrefs":["UniProtKB:O74310","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COBW domain-containing protein C15D4.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.05","synonyms":[{"name":"Spom972h-SPBC15D4.05","type":"exact"}],"termid":"PR:O74310"}


id: PBO:0069020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 264, pseudogene","termid":"PBO:0069020"}


id: PBO:0089415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc2/TPR repeat protein Oca3","termid":"PBO:0089415"}


id: GO:0018272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form N6-pyridoxal phosphate-L-lysine.","definition_xrefs":["RESID:AA0119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine","termid":"GO:0018272"}


id: PBO:0075488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 1","termid":"PBO:0075488"}


id: SO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of LNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"LNA","termid":"SO:0001188"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Locked_nucleic_acid"],"synonyms":[{"name":"LNA oligo","type":"exact"},{"name":"locked nucleic acid","type":"exact"}],"termid":"SO:0001189"}


id: MOD:00846
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"stub","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"}


id: PBO:0034338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_1_orthology_relationship_with","termid":"PBO:0034338"}


id: GO:1902285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in neuron projection guidance.","definition_xrefs":["GOC:TermGenie","PMID:22790009","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"},{"relation_name":"part_of","term_name":"neuron projection guidance","termid":"GO:0097485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in neurite guidance","type":"narrow"},{"name":"semaphorin-plexin signaling pathway involved in neuron process guidance","type":"exact"},{"name":"semaphorin-plexin signaling pathway involved in neuron protrusion guidance","type":"exact"},{"name":"semaphorin-plexin signaling pathway involved in neuronal cell projection guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neurite guidance","type":"narrow"},{"name":"semaphorin-plexin signalling pathway involved in neuron process guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuron projection guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuron protrusion guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuronal cell projection guidance","type":"exact"}],"termid":"GO:1902285"}


id: GO:0065010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular membrane-bounded organelle","synonyms":[{"name":"extracellular membrane-enclosed organelle","type":"exact"}],"termid":"GO:0065010"}


id: FYPO:0004521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated), and undergoes one or two rounds of cell division and then dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated cell","termid":"FYPO:0001512"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, elongated cell","termid":"FYPO:0002724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, branched, elongated cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, elongated and branched cell","type":"exact"},{"name":"inviable following spore germination, single or double cell division, branched, elongated cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, branched, elongated cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, branched, elongated cell","type":"exact"}],"termid":"FYPO:0004521"}


id: PBO:0071863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 1","termid":"PBO:0071863"}


id: PBO:0005161
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the chromatin silencing function of H2Bub is independent of H3K4 methylation","termid":"PBO:0005161"}


id: PBO:0055319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2747","termid":"PBO:0055319"}


id: PBO:0079755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocortin","termid":"PBO:0079755"}


id: GO:0014040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell differentiation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell differentiation","termid":"GO:0014038"},{"relation_name":"is_a","term_name":"positive regulation of glial cell differentiation","termid":"GO:0045687"},{"relation_name":"positively_regulates","term_name":"Schwann cell differentiation","termid":"GO:0014037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell differentiation","synonyms":[{"name":"activation of Schwann cell differentiation","type":"narrow"},{"name":"stimulation of Schwann cell differentiation","type":"narrow"},{"name":"up regulation of Schwann cell differentiation","type":"exact"},{"name":"up-regulation of Schwann cell differentiation","type":"exact"},{"name":"upregulation of Schwann cell differentiation","type":"exact"}],"termid":"GO:0014040"}


id: PBO:0016064
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Response Regulator","termid":"PBO:0016064"}


id: GO:0140998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone H2B.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0140096","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"histone H2B kinase activity","termid":"GO:0140998"}


id: PBO:0088616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein, TspO/MBR-related, implicated in lipid/sterol transport, tspO","termid":"PBO:0088616"}


id: PBO:0048651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 2","termid":"PBO:0048651"}


id: PR:P41893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low molecular weight phosphotyrosine protein phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01610","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low molecular weight phosphotyrosine protein phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.12c","secondary_identifiers":["UniProtKB:P41893"],"synonyms":[{"name":"PTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACP1","type":"exact"},{"name":"low molecular weight cytosolic acid phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"small tyrosine phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41893"}


id: PR:Q09887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cationic amino acid transporter 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C584.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.13","secondary_identifiers":["UniProtKB:Q09887"],"synonyms":[{"name":"Spom972h-SLC7A4","type":"exact"}],"termid":"PR:Q09887"}


id: PBO:0083292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6","termid":"PBO:0083292"}


id: PBO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 11-55 (non-functional)","termid":"PBO:0051464"}


id: PBO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutive_catalytic_activity","termid":"PBO:0031537"}


id: PBO:0081187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 3","termid":"PBO:0081187"}


id: GO:0008612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["ISBN:0198547684","RESID:AA0116","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine modification to peptidyl-hypusine","secondary_identifiers":["GO:0046515"],"synonyms":[{"name":"hypusine anabolism","type":"exact"},{"name":"hypusine anabolism from peptidyl-lysine","type":"exact"},{"name":"hypusine biosynthesis","type":"exact"},{"name":"hypusine biosynthetic process","type":"exact"},{"name":"hypusine biosynthetic process from peptidyl-lysine","type":"exact"},{"name":"hypusine formation","type":"exact"},{"name":"hypusine formation from peptidyl-lysine","type":"exact"},{"name":"hypusine synthesis","type":"exact"},{"name":"hypusine synthesis from peptidyl-lysine","type":"exact"},{"name":"hypusinylation","type":"exact"},{"name":"protein hypusination","type":"exact"}],"termid":"GO:0008612"}


id: PBO:0069023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 268, pseudogene","termid":"PBO:0069023"}


id: PBO:0087991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase; deaminates adenosine-37 to inosine in tRNA-Ala","termid":"PBO:0087991"}


id: GO:0060887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epidermis of the limb over time, from its formation to the mature structure. The limb epidermis is the outer epithelial layer of the limb, it is a complex stratified squamous epithelium.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis development","termid":"GO:0060887"}


id: GO:0061214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the mesonephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney smooth muscle tissue development","termid":"GO:0072194"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric smooth muscle tissue development","termid":"GO:0061214"}


id: PBO:0070233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 171 pseudogene","termid":"PBO:0070233"}


id: MOD:00354
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(riboflavin phosphoryl)-L-threonine.","definition_xrefs":["RESID:AA0349","PubMed:10587447","Unimod:442#T","PubMed:11163785","PubMed:11248234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)butanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl threonine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-threonine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-threonyl FMN","type":"exact"},{"name":"O3-threonyl flavin mononucleotide","type":"exact"},{"name":"OFMNThr","type":"exact"}],"termid":"MOD:00354"}


id: PBO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 8","termid":"PBO:0047656"}


id: PBO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 2","termid":"PBO:0043131"}


id: PBO:0028772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_L-methionine_(R)-S-oxide","termid":"PBO:0028772"}


id: PBO:0074434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 34","termid":"PBO:0074434"}


id: PBO:0091537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TPM2","termid":"PBO:0091537"}


id: PBO:0090729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L40","termid":"PBO:0090729"}


id: PBO:0108894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 7","termid":"PBO:0108894"}


id: GO:0031524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving menthol, the monoterpene 2-isopropyl-5-methylcyclohexanol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"menthol metabolic process","synonyms":[{"name":"menthol metabolism","type":"exact"}],"termid":"GO:0031524"}


id: PBO:0066975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 278","termid":"PBO:0066975"}


id: GO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an cytidine-uridine dinucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA cytidine-uridine insertion","synonyms":[{"name":"RNA CU insertion","type":"exact"}],"termid":"GO:0070712"}


id: GO:1904763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a chaperone-mediated autophagy translocation complex.","definition_xrefs":["GOC:PARL","PMID:18644871","GOC:pad","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044085","GO:0030163","GO:0065003","GO:0006914"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex assembly","synonyms":[{"name":"CMA receptor complex assembly","type":"related"},{"name":"CMA receptor complex formation","type":"related"},{"name":"CMA translocation complex assembly","type":"exact"},{"name":"CMA translocation complex formation","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex assembly","type":"related"},{"name":"chaperone-mediated autophagy receptor complex formation","type":"related"},{"name":"chaperone-mediated autophagy translocation complex formation","type":"exact"}],"termid":"GO:1904763"}


id: PBO:0075743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 2","termid":"PBO:0075743"}


id: GO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive T cell acquires the specialized features of an effector, regulatory, or memory T cell as part of an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell differentiation involved in immune response","synonyms":[{"name":"T cell development involved in immune response","type":"related"},{"name":"T cell differentiation during immune response","type":"related"},{"name":"T lymphocyte differentiation during immune response","type":"related"},{"name":"T-cell differentiation during immune response","type":"related"},{"name":"T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002292"}


id: FYPO:0005916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at tRNA genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:25798942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased nucleosome occupancy at tRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at tRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at tRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in tRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at tRNA genes","type":"exact"}],"termid":"FYPO:0005916"}


id: PBO:0034286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_Ib_bouton_to","termid":"PBO:0034286"}


id: PR:Q10099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoporin SEH1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00999","PANTHER:PTHR11024:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin seh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15F9.02","secondary_identifiers":["UniProtKB:Q10099"],"synonyms":[{"name":"Spom972h-SEH1L","type":"exact"},{"name":"nuclear pore protein seh1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10099"}


id: PBO:0044253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19 like cell cycle control factor 1","termid":"PBO:0044253"}


id: FYPO:0007865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the mitotic or meiotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to spindle","synonyms":[{"name":"normal protein localisation to spindle","type":"exact"}],"termid":"FYPO:0007865"}


id: PBO:0071682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 14","termid":"PBO:0071682"}


id: PBO:0056577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple C2 and transmembrane domain containing 1","termid":"PBO:0056577"}


id: GO:0031333
data:
  {"annotated_genes":["SJAG_00279","SJAG_04982","SJAG_02700","SJAG_01993","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78521,74860,77670,87760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[74865,71894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex assembly.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein complex assembly","type":"exact"},{"name":"down-regulation of protein complex assembly","type":"exact"},{"name":"downregulation of protein complex assembly","type":"exact"},{"name":"inhibition of protein complex assembly","type":"narrow"},{"name":"negative regulation of protein complex assembly","type":"related"}],"termid":"GO:0031333","terms_by_termid":{"GO:0042989":null,"GO:0051016":null}}


id: PBO:0056554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 3 associated protein","termid":"PBO:0056554"}


id: GO:1903858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an old growing cell tip.","definition_xrefs":["PMID:17895368","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to growing cell tip","termid":"GO:1902486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to old growing cell tip","synonyms":[{"name":"protein localisation in old growing cell tip","type":"exact"},{"name":"protein localisation to old growing cell tip","type":"exact"},{"name":"protein localization in old growing cell tip","type":"exact"}],"termid":"GO:1903858"}


id: PBO:0012016
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HGT1","termid":"PBO:0012016"}


id: PBO:0087313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of the clathrin-associated adaptor complex AP-1; AP-1 is involved in protein sorting at the trans-Golgi network; homolog of the sigma subunit of the mammalian clathrin AP-1 complex","termid":"PBO:0087313"}


id: RO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of","termid":"RO:0002215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables","termid":"RO:0002327"}


id: PBO:0086420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase involved in 60S ribosomal subunit biogenesis; required for the release of Nmd3p from 60S subunits in the cytoplasm","termid":"PBO:0086420"}


id: PBO:0073246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPSECS antisense RNA 1 (head to head)","termid":"PBO:0073246"}


id: GO:0106158
data:
  {"annotated_genes":["SJAG_03154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107093],"is_not":false,"summary":null,"term":"GO:0106158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction:acyl-CoA + glycerophosphocholine = CoA + 1-acyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:18430972","PMID:27758859","RHEA:58476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycero-3-phosphocholine acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPACT activity","type":"exact"},{"name":"glycerophosphocholine O-acyltransferase activity","type":"exact"}],"termid":"GO:0106158","terms_by_termid":{"GO:0106158":null}}


id: GO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgX isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgX immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgX immunoglobulin complex","termid":"GO:0071759"}


id: PBO:0071344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 2","termid":"PBO:0071344"}


id: PR:Q9UT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC806.06c gene.","definition_xrefs":["UniProtKB:Q9UT53","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide/nicotinic acid mononucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.06c","synonyms":[{"name":"NMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMN/NaMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NaMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NaMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC806.06c","type":"exact"},{"name":"nicotinamide-nucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nicotinate-nucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT53"}


id: PATO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location with oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process to oxygen","termid":"PATO:0001458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aerobic (for occurrence)","termid":"PATO:0001459"}


id: PBO:0080379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS11 core subunit of CORVET and HOPS complexes","termid":"PBO:0080379"}


id: PBO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor like 2","termid":"PBO:0072667"}


id: GO:0010761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell migration that is accomplished by extension and retraction of a fibroblast pseudopodium. A fibroblast is a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast migration","synonyms":[{"name":"fibroblast cell migration","type":"exact"}],"termid":"GO:0010761"}


