# terms

id: PBO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_break-induced_loss_of_heterozygosity","termid":"PBO:0034434"}


id: GO:0097181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor V (F5); formation of the complex inhibits the serine protease activity of coagulation factor V.","definition_xrefs":["GOC:ans","PMID:6323392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor V complex","synonyms":[{"name":"PCI-coagulation factor V complex","type":"exact"},{"name":"SERPINA5-coagulation factor V complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor V complex","type":"exact"},{"name":"protein C inhibitor-F5 complex","type":"exact"},{"name":"serpin A5-coagulation factor V complex","type":"exact"}],"termid":"GO:0097181"}


id: GO:0042322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of rapid eye movement (REM) sleep.","definition_xrefs":["GOC:jl","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, REM sleep","termid":"GO:0042320"},{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, REM sleep","termid":"GO:0042747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, REM sleep","type":"narrow"},{"name":"negative regulation of REM sleep","type":"exact"}],"termid":"GO:0042322"}


id: GO:0006386
data:
  {"annotated_genes":["SJAG_02242","SJAG_03761","SJAG_03689","SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88438,93489,95175,111017],"is_not":false,"summary":null,"term":"GO:0006386"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary RNA polymerase II transcript. RNA polymerase III has an intrinsic ability to terminate transcription upon incorporation of at least 4 contiguous U residues.","definition_xrefs":["PMID:27371117","PMID:12944462","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_02242":null,"SJAG_03689":null,"SJAG_03761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"termination of RNA polymerase III transcription","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019225"],"synonyms":[{"name":"RNA polymerase III transcription termination","type":"exact"},{"name":"RNA polymerase III transcription termination factor activity","type":"related"},{"name":"transcription termination from Pol III promoter","type":"exact"},{"name":"transcription termination from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006386","terms_by_termid":{"GO:0006386":null}}


id: PBO:0076132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 3","termid":"PBO:0076132"}


id: PBO:0004179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-Pro dipeptidase (predicted)","termid":"PBO:0004179"}


id: PATO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased male fertility","synonyms":[{"name":"high male fertility","type":"exact"}],"termid":"PATO:0001832"}


id: GO:1905245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:jl","PMID:21745575","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aspartic-type peptidase activity","termid":"GO:1905245"}


id: GO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + ATP + UDP-N-acetylmuramoyl-L-alanine = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate.","definition_xrefs":["RHEA:16429","EC:6.3.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanine-D-glutamate ligase activity","secondary_identifiers":["MetaCyc:UDP-NACMURALA-GLU-LIG-RXN","KEGG_REACTION:R02783"],"synonyms":[{"name":"D-glutamate ligase activity","type":"related"},{"name":"D-glutamate-adding enzyme activity","type":"related"},{"name":"MurD synthetase activity","type":"related"},{"name":"UDP-Mur-NAC-L-Ala:D-Glu ligase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine:glutamate ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamate synthetase activity","type":"related"}],"termid":"GO:0008764"}


id: GO:0070110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a receptor for the cytokine ciliary neurotrophic factor (CNTF). In humans the receptor complex is a hexamer composed of two molecules each of CNTF and CNTFR and one molecule each of gp130 and LIFR.","definition_xrefs":["GOC:BHF","PMID:12707266","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ciliary neurotrophic factor receptor complex","termid":"GO:0070110"}


id: GO:0045181
data:
  {"annotated_genes":["SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + NAD(P)+ = L-glutamine + 2-oxoglutarate + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.13","EC:1.4.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate synthase activity, NAD(P)H as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"glutamate synthase activity, NADH or NADPH as acceptor","type":"related"}],"termid":"GO:0045181","terms_by_termid":{"GO:0016040":null}}


id: PBO:0073330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 6","termid":"PBO:0073330"}


id: GO:0072330
data:
  {"annotated_genes":["SJAG_04107","SJAG_04481","SJAG_03632","SJAG_03130","SJAG_02988","SJAG_03313","SJAG_04404","SJAG_01300","SJAG_03553","SJAG_04972","SJAG_03972","SJAG_02717","SJAG_00305","SJAG_03198","SJAG_03943","SJAG_04674","SJAG_02007","SJAG_02885","SJAG_04988","SJAG_00673","SJAG_01238","SJAG_01458","SJAG_03526","SJAG_01946","SJAG_03786","SJAG_02106","SJAG_05200","SJAG_00630","SJAG_01356","SJAG_00043","SJAG_03180","SJAG_03679","SJAG_02796","SJAG_00099","SJAG_01935","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019413"},{"annotations":[77981,75148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[93599,86896,92671,76114,75793,70069,97316,90391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[73130,78150,106429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[87389,76488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[87390,76486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[94697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034276"},{"annotations":[59102,62389,60707,107900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[92527,74242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[99572,71965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[70721],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[93028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[98009,72010,76264,108455,84425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[93604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042866"},{"annotations":[70082,74253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[73131,76489,98720,72197,87393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00099":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00673":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_01935":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02106":null,"SJAG_02717":null,"SJAG_02769":null,"SJAG_02796":null,"SJAG_02885":null,"SJAG_02988":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_03786":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04481":null,"SJAG_04674":null,"SJAG_04972":null,"SJAG_04988":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monocarboxylic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"monocarboxylic acid anabolism","type":"exact"},{"name":"monocarboxylic acid biosynthesis","type":"exact"},{"name":"monocarboxylic acid formation","type":"exact"},{"name":"monocarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072330","terms_by_termid":{"GO:0006633":null,"GO:0006636":null,"GO:0009102":null,"GO:0009107":null,"GO:0015940":null,"GO:0019249":null,"GO:0019367":null,"GO:0019413":null,"GO:0030497":null,"GO:0034276":null,"GO:0034625":null,"GO:0042759":null,"GO:0042761":null,"GO:0042866":null,"GO:0045717":null,"GO:1900535":null}}


id: GO:0060454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastric acid secretion","termid":"GO:0060454"}


id: GO:0110149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of biomineralization (obsolete GO:0110149)","synonyms":[{"name":"regulation of biomineral formation","type":"narrow"},{"name":"regulation of biomineralisation","type":"exact"},{"name":"regulation of mineralisation","type":"exact"},{"name":"regulation of mineralization","type":"exact"}],"termid":"GO:0110149"}


id: GO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"secondary metabolite catabolic process","synonyms":[{"name":"secondary metabolite breakdown","type":"exact"},{"name":"secondary metabolite catabolism","type":"exact"},{"name":"secondary metabolite degradation","type":"exact"}],"termid":"GO:0090487"}


id: GO:0033689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of osteoblast proliferation","termid":"GO:0033688"},{"relation_name":"negatively_regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast proliferation","synonyms":[{"name":"down regulation of osteoblast proliferation","type":"exact"},{"name":"down-regulation of osteoblast proliferation","type":"exact"},{"name":"downregulation of osteoblast proliferation","type":"exact"},{"name":"inhibition of osteoblast proliferation","type":"narrow"}],"termid":"GO:0033689"}


id: PBO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G1/S_phase_transition_(obsolete_FYPO:0000397)","termid":"PBO:0031803"}


id: GO:1903970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["PMID:19100238","GO_REF:0000058","GOC:nc","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to cytokine stimulus","termid":"GO:0060761"},{"relation_name":"is_a","term_name":"regulation of response to macrophage colony-stimulating factor","termid":"GO:1903969"},{"relation_name":"negatively_regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"down regulation of response to M-CSF","type":"exact"},{"name":"down regulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"down regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"down-regulation of response to M-CSF","type":"exact"},{"name":"down-regulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"down-regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"downregulation of response to M-CSF","type":"exact"},{"name":"downregulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"downregulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"inhibition of response to M-CSF","type":"narrow"},{"name":"inhibition of response to macrophage colony-stimulating factor","type":"narrow"},{"name":"inhibition of response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"negative regulation of response to M-CSF","type":"exact"},{"name":"negative regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903970"}


id: PBO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Rhp57 independently of Swi5","termid":"PBO:0001683"}


id: PBO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin Cam1","termid":"PBO:0000978"}


id: PBO:0074482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 1","termid":"PBO:0074482"}


id: MOD:01551
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01551"}


id: PR:Q7Z991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- caf16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C20G4.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.01","synonyms":[{"name":"Spom972h-caf16","type":"exact"}],"termid":"PR:Q7Z991"}


id: GO:0031099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a lost or destroyed body part, such as an organ or tissue. This process may occur via renewal, repair, and/or growth alone (i.e. increase in size or mass).","definition_xrefs":["GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regeneration","secondary_identifiers":["Wikipedia:Regeneration_(biology)"],"termid":"GO:0031099"}


id: GO:0090674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of an endothelial cell to the extracellular matrix via fibronectin.","definition_xrefs":["PMID:19460962","GOC:BHF_miRNA","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell-matrix adhesion","termid":"GO:0090673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}


id: PBO:0089280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, transmembrane ring glycoprotein subunit Pom152","termid":"PBO:0089280"}


id: PBO:0060791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S2","termid":"PBO:0060791"}


id: PATO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is less than extreme in type or degree or effect or force.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate intensity","termid":"PATO:0000395"}


id: GO:0010514
data:
  {"annotated_genes":["SJAG_01084","SJAG_00472","SJAG_03309","SJAG_02472","SJAG_01699","SJAG_03067","SJAG_04312","SJAG_00600","SJAG_01718","SJAG_06638","SJAG_00210","SJAG_00526","SJAG_04206","SJAG_03486","SJAG_02730","SJAG_04813","SJAG_04009","SJAG_02785","SJAG_02773","SJAG_02592","SJAG_02066","SJAG_03081","SJAG_00256","SJAG_01113","SJAG_03802","SJAG_00975","SJAG_01254","SJAG_02723","SJAG_01311","SJAG_03501","SJAG_02444","SJAG_03346","SJAG_02266","SJAG_00781","SJAG_04026","SJAG_05153","SJAG_03735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83594,84738,101476,111174,111505,113180],"is_not":false,"summary":null,"term":"GO:0010514"},{"annotations":[93756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[110607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[102042,97117,99746,101106,86865,88345,89769,101849,109534,110553,95822,101013,83766,101691,104175,89627,111101],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[103970,99688,96672,94802,83425,95780,114012,111304,114013,102243,103747,98613],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900237"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion. Conjugation with cellular fusion is the process that results in the union of cellular and genetic information from compatible mating types.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_02066":null,"SJAG_02266":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03346":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04813":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010514","terms_by_termid":{"GO:0010514":null,"GO:0010515":null,"GO:0031141":null,"GO:0031142":null,"GO:1900237":null}}


id: PBO:0058928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7f-2","termid":"PBO:0058928"}


id: PBO:0044071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin B","termid":"PBO:0044071"}


id: PBO:0059255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L21","termid":"PBO:0059255"}


id: PBO:0078110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor associated transmembrane adaptor 1","termid":"PBO:0078110"}


id: GO:1905867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epididymis over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","PMID:12388089","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epididymis development","synonyms":[{"name":"epididymus development","type":"exact"}],"termid":"GO:1905867"}


id: PBO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.-","termid":"PBO:0000784"}


id: PBO:0028533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_secondary_cell_septum_biogenesis","termid":"PBO:0028533"}


id: PBO:0075706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2","termid":"PBO:0075706"}


id: PBO:0072631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich coiled-coil 1","termid":"PBO:0072631"}


id: FYPO:0002573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:22927644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Ssb1 foci","synonyms":[{"name":"increased number of RPA foci","type":"exact"},{"name":"increased number of Rad11 foci","type":"exact"},{"name":"increased number of Rpa1 foci","type":"exact"},{"name":"increased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0002573"}


id: GO:0033187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate, and ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["PMID:17412958","PMID:17412959"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol hexakisphosphate 4-kinase or 6-kinase activity (obsolete GO:0033187)","synonyms":[{"name":"inositol hexakisphosphate 4-kinase or 6-kinase activity","type":"exact"}],"termid":"GO:0033187"}


id: PBO:0071143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 6","termid":"PBO:0071143"}


id: GO:0032109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a response to nutrient levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to extracellular stimulus","termid":"GO:0032106"},{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"positively_regulates","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to nutrient levels","synonyms":[{"name":"activation of response to nutrient levels","type":"narrow"},{"name":"stimulation of response to nutrient levels","type":"narrow"},{"name":"up regulation of response to nutrient levels","type":"exact"},{"name":"up-regulation of response to nutrient levels","type":"exact"},{"name":"upregulation of response to nutrient levels","type":"exact"}],"termid":"GO:0032109"}


id: PBO:0092761
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0092761"}


id: PBO:0056407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 5","termid":"PBO:0056407"}


id: MOD:01255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-(2-sulfanylethyl)cysteine.","definition_xrefs":["PubMed:11507762","Unimod:200#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-ethanedithiol modified residue","termid":"MOD:00553"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-sulfanylethyl)cysteine (Ser)","synonyms":[{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"},{"name":"S-(2-mercaptoethyl)cysteine","type":"exact"}],"termid":"MOD:01255"}


id: PR:O59674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ort1 gene.","definition_xrefs":["UniProtKB:O59674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C29A3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.11c","synonyms":[{"name":"Spom972h-ort1","type":"exact"}],"termid":"PR:O59674"}


id: PBO:0069201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 455, pseudogene","termid":"PBO:0069201"}


id: PBO:0034393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-evolutionarily_related_to","termid":"PBO:0034393"}


id: GO:0019338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentachlorophenol metabolic process","termid":"GO:0018961"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"pentachlorophenol catabolic process","secondary_identifiers":["MetaCyc:PCPDEG-PWY"],"synonyms":[{"name":"pentachlorophenol breakdown","type":"exact"},{"name":"pentachlorophenol catabolism","type":"exact"},{"name":"pentachlorophenol degradation","type":"exact"}],"termid":"GO:0019338"}


id: GO:0034340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type I interferon stimulus. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","PMID:16681834","ISBN:0126896631","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"},{"relation_name":"part_of","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to type I interferon","synonyms":[{"name":"response to type I IFN","type":"exact"}],"termid":"GO:0034340"}


id: PR:000044702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/InitMet-/Me:(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044702"}


id: PR:000027621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 ubiquitinated form in Schizosaccharomyces pombe. Ubiquitinated by SCF(Pof1). Example: UniProtKB:Q10424-1, MOD:01148.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 ubiquitinated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UbiqLys+","type":"exact"}],"termid":"PR:000027621"}


id: PBO:0039810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 1","termid":"PBO:0039810"}


id: GO:0038160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-X-C chemokine CXCL12 to a C-X-C chemokine type 4 receptor (CXCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-X-C motif) ligand 12 signaling pathway","termid":"GO:0038146"},{"relation_name":"is_a","term_name":"C-X-C chemokine receptor CXCR4 signaling pathway","termid":"GO:0038159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CXCL12-activated CXCR4 signaling pathway","synonyms":[{"name":"CXCL12-activated CXCR4 signalling pathway","type":"exact"}],"termid":"GO:0038160"}


id: GO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002589"}


id: PBO:0046995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member F","termid":"PBO:0046995"}


id: PBO:0084695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial elongation factor involved in translational elongation","termid":"PBO:0084695"}


id: PR:O14278
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug129 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 129 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.09c","synonyms":[{"name":"Spom972h-mug129","type":"exact"}],"termid":"PR:O14278"}


id: GO:0007170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane receptor protein tyrosine kinase ligand binding (obsolete GO:0007170)","synonyms":[{"name":"transmembrane receptor protein tyrosine kinase ligand binding","type":"exact"}],"termid":"GO:0007170"}


id: GO:0038010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the internalization of a signaling receptor activates or increases the frequency, rate or extent of signal transduction. Receptor internalization can enhance signaling by concentrating signaling molecules in one location, or by moving a ligand-activated receptor to the location of downstream signaling proteins. Endosomes for example can serve as important intracellular signaling platforms.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:17908284","PMID:19696798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of signal transduction by receptor internalization","termid":"GO:0038009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signal transduction by receptor internalization","synonyms":[{"name":"positive regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038010"}


id: PBO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell,_septa_grouped","termid":"PBO:0030365"}


id: SO:0000888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is maternally_imprinted.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"maternally_imprinted","termid":"SO:0000135"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally_imprinted_gene","synonyms":[{"name":"maternally imprinted gene","type":"exact"}],"termid":"SO:0000888"}


id: PBO:0109609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24","termid":"PBO:0109609"}


id: PBO:0046860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated factor family member 2 pseudogene 1","termid":"PBO:0046860"}


id: PBO:0089037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding","termid":"PBO:0089037"}


id: PBO:0012226
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type cyclin pombe","termid":"PBO:0012226"}


id: PBO:0056817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 10","termid":"PBO:0056817"}


id: GO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila).","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_kidney_jan10","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process","synonyms":[{"name":"excretory system process","type":"exact"},{"name":"kidney system process","type":"related"}],"termid":"GO:0003014"}


id: PATO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a slanting direction or position : neither perpendicular nor parallel.","definition_xrefs":["merriam-wester:http://www.merriam-webster.com/dictionary/oblique"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique orientation","termid":"PATO:0002481"}


id: PBO:0072676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotatin","termid":"PBO:0072676"}


id: PR:Q9Y7Q3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.10","synonyms":[{"name":"Spom972h-SPCC191.10","type":"exact"}],"termid":"PR:Q9Y7Q3"}


id: PATO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000003 assay (obsolete PATO:0000003)","termid":"PATO:0000003"}


id: GO:0015576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sorbitol from one side of a membrane to the other. Sorbitol, also known as glucitol, is the hexitol derived by the reduction of the aldehyde group of glucose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sorbitol transmembrane transporter activity","secondary_identifiers":["GO:0015587"],"synonyms":[{"name":"glucitol permease activity","type":"exact"},{"name":"glucitol transporter activity","type":"exact"},{"name":"sorbitol permease activity","type":"exact"}],"termid":"GO:0015576"}


id: GO:1990978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416"],"gene_count":0,"genotype_count":0,"name":"obsolete response to viscosity (obsolete GO:1990978)","termid":"GO:1990978"}


id: PBO:0066379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIG-I dependent antiviral response regulator RNA","termid":"PBO:0066379"}


id: GO:0031470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle consisting of a proteinaceous coat and enzymes for the fixation of CO2. It augments the concentration of CO2 in the vicinity of RuBisCO to increase the efficiency of CO2 fixation under atmospheric conditions.","definition_xrefs":["PMID:8157606","PMID:28934381","GOC:js","PMID:8491708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"carboxysome","secondary_identifiers":["Wikipedia:Carboxysome"],"termid":"GO:0031470"}


id: PBO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner nuclear membrane protein Ima1","termid":"PBO:0018192"}


id: PBO:0077472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191C","termid":"PBO:0077472"}


id: PBO:0047055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 117 member A","termid":"PBO:0047055"}


id: GO:0097531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a mast cell within or between different tissues and organs of the body.","definition_xrefs":["PMID:24152847","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell migration","termid":"GO:0097531"}


id: PBO:0018106
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RAD7","termid":"PBO:0018106"}


id: PBO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox retrogene P8","termid":"PBO:0060486"}


id: GO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin biosynthetic process","synonyms":[{"name":"activation of integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of integrin anabolism","type":"exact"},{"name":"positive regulation of integrin biosynthesis","type":"exact"},{"name":"positive regulation of integrin formation","type":"exact"},{"name":"positive regulation of integrin synthesis","type":"exact"},{"name":"stimulation of integrin biosynthetic process","type":"narrow"},{"name":"up regulation of integrin biosynthetic process","type":"exact"},{"name":"up-regulation of integrin biosynthetic process","type":"exact"},{"name":"upregulation of integrin biosynthetic process","type":"exact"}],"termid":"GO:0045726"}


id: GO:0018713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-ketopimeloyl-CoA + CoA = glutaryl-CoA + acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"3-ketopimelyl-CoA thiolase activity","secondary_identifiers":["MetaCyc:RXN-8032"],"termid":"GO:0018713"}


id: PBO:0031887
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RFC3","termid":"PBO:0031887"}


id: PBO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.4","termid":"PBO:0000464"}


id: PBO:0072758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 8","termid":"PBO:0072758"}


id: GO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 ferricytochrome c + nitrous oxide = 2 H+ + 2 ferrocytochrome c + 2 nitric oxide.","definition_xrefs":["EC:1.7.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitric oxide reductase activity","secondary_identifiers":["MetaCyc:NITRIC-OXIDE-REDUCTASE-RXN","KEGG_REACTION:R00294","RHEA:30211","GO:0016967","GO:0016968"],"synonyms":[{"name":"CYP55","type":"narrow"},{"name":"P450 nitric oxide reductase activity","type":"narrow"},{"name":"P450nor","type":"narrow"},{"name":"cytochrome bc nitric oxide reductase activity","type":"narrow"},{"name":"nitric-oxide reductase activity","type":"related"},{"name":"nitrogen oxide reductase activity","type":"related"},{"name":"nitrous-oxide:(acceptor) oxidoreductase (NO-forming)","type":"related"},{"name":"nitrous-oxide:acceptor oxidoreductase (NO-forming)","type":"related"}],"termid":"GO:0016966"}


id: PBO:0080870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YKT6 v-SNARE homolog","termid":"PBO:0080870"}


id: PBO:0062208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AC member 4 pseudogene","termid":"PBO:0062208"}


id: GO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ovulation cycle process in which one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells is formed as part of the fused antrum stage of oogenesis.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular fluid formation in ovarian follicle antrum","termid":"GO:0001548"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum involved in fused antrum stage","synonyms":[{"name":"follicular fluid formation in ovarian follicle antrum during fused antrum stage","type":"related"}],"termid":"GO:0003003"}


id: PBO:0091582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosomal protein Rsm2202, fusion protein","termid":"PBO:0091582"}


id: RO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_function","termid":"RO:0000085"}


id: PBO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 26","termid":"PBO:0072149"}


id: GO:0034795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexane + O2 + NAD(P)H + H+ = cyclohexanol + NAD(P)+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclohexane monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-8697","EC:1.14.15.-","KEGG_REACTION:R06945"],"synonyms":[{"name":"butane monooxygenase activity","type":"related"},{"name":"cyclohexane hydroxylase activity","type":"exact"}],"termid":"GO:0034795"}


id: PBO:0072245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 20","termid":"PBO:0072245"}


id: PBO:0089062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein1, 3-beta-glucan synthase regulatory factor Chf3/Chr4","termid":"PBO:0089062"}


id: PBO:0081083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 13","termid":"PBO:0081083"}


id: PR:O13701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr6 gene.","definition_xrefs":["UniProtKB:O13701","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.02c","synonyms":[{"name":"Spom972h-ptr6","type":"exact"},{"name":"TAFII-55 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 55 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13701"}


id: PBO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 3","termid":"PBO:0060777"}


id: PATO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000726 autonomic function value (obsolete PATO:0000726)","termid":"PATO:0000726"}


id: PBO:0053687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 880","termid":"PBO:0053687"}


id: PBO:0086132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for localizing proteasomes to the nucleus; involved in cotranslational protein degradation; mediates interaction between nuclear import factor Srp1p and the proteasome; Sts1p and Srp1p couple proteasomes to nascent polypeptides emerging from the ribosome for cotranslational degradation; involved in ubiquitin-mediated protein degradation","termid":"PBO:0086132"}


id: GO:0019128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The racemization of peptidyl-tryptophan.","definition_xrefs":["RESID:AA0198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-tryptophan racemization","secondary_identifiers":["GO:0018092","GO:0018374"],"termid":"GO:0019128"}


id: GO:0120164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological and developmental changes that occur in a conidium or asexual spore following release from dormancy up to the earliest signs of development such as swelling of conidia, adhesion and nuclear decondensation followed by hyphal growth several hours later. In many genera of plant pathogenic fungi (e.g. Magnaporthe, Colletotrichum, Ustilago), swelling of the hyphal tips to form appressorium, metabolic activities including respiration, RNA and protein synthesis and trehalose breakdown and changes in cell wall composition can be detected in conidium germination.","definition_xrefs":["PMID:18944978","PMID:27355215","PMID:11377860","PMID:25063657","PMID:9529886","DOI:10.1128/9781555815523.ch10","PMID:10835388","PMID:17950638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidium germination","termid":"GO:0120164"}


id: PBO:0039443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and KH domain containing 1","termid":"PBO:0039443"}


id: GO:0031550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031548"},{"relation_name":"positively_regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"activation of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"positive regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"positive regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"stimulation of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"upregulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"}],"termid":"GO:0031550"}


id: GO:0035241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a methyl group to either of the unmethylated terminal nitrogen atoms (also called omega nitrogen) in peptidyl-arginine to form an omega-N-G-monomethylated arginine residue. The reaction is S-adenosyl-L-methionine + [protein]-L-arginine = S-adenosyl-L-homocysteine + [protein]-Nomega-methyl-L-arginine.","definition_xrefs":["PMID:14705965","EC:2.1.1.321","RESID:AA0069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0008276","GO:0003674","GO:0016741","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-arginine omega-N monomethyltransferase activity","secondary_identifiers":["RHEA:48100","MetaCyc:2.1.1.124-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega-methyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N monomethylase activity","type":"exact"},{"name":"type III protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035241"}


id: PBO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 14","termid":"PBO:0046356"}


id: PBO:0004107
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"region specific activator of recombination","termid":"PBO:0004107"}


id: GO:0003746
data:
  {"annotated_genes":["SJAG_02180","SJAG_05332","SJAG_04862","SJAG_02493","SJAG_03461","SJAG_02812","SJAG_02189","SJAG_05271","SJAG_01438","SJAG_02017","SJAG_02738","SJAG_02353","SJAG_01851","SJAG_04157"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72311,72936,75733,78264,90723,98141,104327,104328,106637,109780,113431,113432,113433,113890],"is_not":false,"summary":null,"term":"GO:0003746"}]},"cv_name":"molecular_function","definition":"Functions in chain elongation during polypeptide synthesis at the ribosome.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation factor activity, RNA binding","termid":"GO:0008135"}],"gene_count":14,"genes_by_uniquename":{"SJAG_01438":null,"SJAG_01851":null,"SJAG_02017":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02353":null,"SJAG_02493":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_03461":null,"SJAG_04157":null,"SJAG_04862":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"translation elongation factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-192704","Reactome:R-HSA-192841","GO:0008182","GO:0008183"],"termid":"GO:0003746","terms_by_termid":{"GO:0003746":null}}


id: PBO:0062797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 2","termid":"PBO:0062797"}


id: PBO:0083643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongase; involved in fatty acid and sphingolipid biosynthesis; synthesizes very long chain 20-26-carbon fatty acids from C18-CoA primers; involved in regulation of sphingolipid biosynthesis; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7","termid":"PBO:0083643"}


id: PBO:0016998
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CAT5","termid":"PBO:0016998"}


id: PBO:0045205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C1","termid":"PBO:0045205"}


id: PBO:0042497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 17","termid":"PBO:0042497"}


id: GO:0030271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage: Phe-Xaa > Tyr-Xaa > Trp-Xaa > Leu-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chymase activity (obsolete GO:0030271)","synonyms":[{"name":"SK protease activity","type":"related"},{"name":"chymase activity","type":"exact"},{"name":"mast cell protease I activity","type":"narrow"},{"name":"mast cell serine proteinase","type":"narrow"},{"name":"skeletal muscle (SK) protease activity","type":"narrow"},{"name":"skeletal muscle protease","type":"narrow"},{"name":"skin chymotryptic proteinase","type":"narrow"}],"termid":"GO:0030271"}


id: _global:occupancy
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"A number representing what proportion of copies of the protein have the modification.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupancy","termid":"_global:occupancy"}


id: GO:0050905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process pertaining to the functions of the nervous and muscular systems of an organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process","synonyms":[{"name":"neuromotor process","type":"exact"},{"name":"neuromuscular physiological process","type":"exact"}],"termid":"GO:0050905"}


id: GO:0061776
data:
  {"annotated_genes":["SJAG_01831","SJAG_03436","SJAG_03832","SJAG_02545","SJAG_00768","SJAG_03161","SJAG_05019","SJAG_01332","SJAG_03418","SJAG_03682","SJAG_00871","SJAG_03926","SJAG_01067","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83393,84585,86405,98434,101503,102935,103013,107161,108477,110946,111553,111879,112065,112576],"is_not":false,"summary":null,"term":"GO:0061776"}]},"cv_name":"molecular_function","definition":"A DNA binding activity in which a protein complex interacts with more than one DNA duplex to encircle the DNA molecules with a loose fitting ring.","definition_xrefs":["PMID:16179255","GOC:dph","PMID:27797071","GOC:vw","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00871":null,"SJAG_01067":null,"SJAG_01332":null,"SJAG_01831":null,"SJAG_02545":null,"SJAG_03161":null,"SJAG_03418":null,"SJAG_03436":null,"SJAG_03682":null,"SJAG_03698":null,"SJAG_03832":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"topological DNA co-entrapment activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"topological DNA entrapment activity","type":"related"}],"termid":"GO:0061776","terms_by_termid":{"GO:0061776":null}}


id: PBO:0059285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42","termid":"PBO:0059285"}


id: FYPO:0006405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the meiotic spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented spindle pole body","termid":"FYPO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"fragmented meiotic spindle pole body","synonyms":[{"name":"fragmented meiotic SPB","type":"exact"},{"name":"fragmented spindle pole body during meiotic cell cycle","type":"exact"},{"name":"meiotic spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0006405"}


id: SO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A purine-rich sequence in the group I introns which determines the locations of the splice sites in group I intron splicing and has catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"group_I_intron","termid":"SO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_guide_sequence","synonyms":[{"name":"IGS","type":"exact"},{"name":"internal guide sequence","type":"exact"}],"termid":"SO:0001016"}


id: PBO:0078898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-2","termid":"PBO:0078898"}


id: PBO:0090370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF complex transcription corepressor, Whi5","termid":"PBO:0090370"}


id: GO:0002906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell apoptotic process","termid":"GO:0002903"},{"relation_name":"is_a","term_name":"regulation of mature B cell apoptotic process","termid":"GO:0002905"},{"relation_name":"negatively_regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mature B cell apoptotic process","synonyms":[{"name":"down regulation of mature B cell apoptosis","type":"exact"},{"name":"down-regulation of mature B cell apoptosis","type":"exact"},{"name":"downregulation of mature B cell apoptosis","type":"exact"},{"name":"inhibition of mature B cell apoptosis","type":"narrow"},{"name":"negative regulation of mature B cell apoptosis","type":"narrow"}],"termid":"GO:0002906"}


id: FYPO:0009091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and proline as  nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0005447","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on lysine and proline nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and proline nitrogen source","type":"exact"}],"termid":"FYPO:0009091"}


id: GO:0120275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the network of arteries and veins supplying the cerebrum, enabling the transport of nutrients to the tissues and the removal of waste products.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral blood circulation","synonyms":[{"name":"cerebrum blood circulation","type":"exact"},{"name":"telencephelon blood circulation","type":"exact"}],"termid":"GO:0120275"}


id: PBO:0091841
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A replaces histone H3 in new nucleosomes at centromeres during mitotic G2 phase","termid":"PBO:0091841"}


id: GO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism.","definition_xrefs":["PMID:10595640","GOC:klp"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peptidase activity in other organism (obsolete GO:0035940)","synonyms":[{"name":"down regulation of peptidase activity in other organism","type":"exact"},{"name":"down-regulation of protease activity in other organism","type":"narrow"},{"name":"downregulation of peptidase activity in other organism","type":"exact"},{"name":"inhibition of protease activity in other organism","type":"narrow"},{"name":"negative regulation of protease activity in other organism","type":"narrow"}],"termid":"GO:0035940"}


id: SO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_ablation","termid":"SO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"TFBS ablation","type":"exact"},{"name":"VEP:TFBS_ablation","type":"exact"},{"name":"transcription factor binding site ablation","type":"exact"}],"termid":"SO:0001895"}


id: PBO:0034329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_prototype","termid":"PBO:0034329"}


id: PBO:0041077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of ribosomes BRX1","termid":"PBO:0041077"}


id: PBO:0031316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_process_phenotype","termid":"PBO:0031316"}


id: PBO:0076899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 53","termid":"PBO:0076899"}


id: PBO:0045483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSCAM antisense RNA 1","termid":"PBO:0045483"}


id: PBO:0030762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_mercury_ion","termid":"PBO:0030762"}


id: GO:1990887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine = ubiquinol-n + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:10419476"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol O-methyltransferase activity (obsolete GO:1990887)","termid":"GO:1990887"}


id: GO:0070180
data:
  {"annotated_genes":["SJAG_03043","SJAG_01087","SJAG_03197","SJAG_04847","SJAG_00315","SJAG_02510"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70187,71228,73922,107304,107305,109548],"is_not":false,"summary":null,"term":"GO:0070180"}]},"cv_name":"molecular_function","definition":"Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00315":null,"SJAG_01087":null,"SJAG_02510":null,"SJAG_03043":null,"SJAG_03197":null,"SJAG_04847":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"large ribosomal subunit rRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"25S rRNA binding","type":"exact"},{"name":"LSU rRNA binding","type":"exact"}],"termid":"GO:0070180","terms_by_termid":{"GO:0070180":null}}


id: GO:0047657
data:
  {"annotated_genes":["SJAG_04236","SJAG_04184","SJAG_03057","SJAG_02916","SJAG_01028"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70437,71241,72629,72798,77352],"is_not":false,"summary":null,"term":"GO:0047657"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + [alpha-D-glucosyl-(1,3)]n = UDP + [alpha-D-glucosyl-(1,3)]n+1.","definition_xrefs":["EC:2.4.1.183","MetaCyc:ALPHA-13-GLUCAN-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01028":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"alpha-1,3-glucan synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:19749"],"synonyms":[{"name":"1,3-alpha-D-glucan synthase activity","type":"related"},{"name":"1,3-alpha-glucan synthase activity","type":"exact"},{"name":"UDP-glucose:alpha-D-(1->3)-glucan 3-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:alpha-D-(1->3)-glucan 3-alpha-D-glucosyltransferase activity","type":"related"},{"name":"a-1,3-glucan synthase activity","type":"exact"},{"name":"uridine diphosphoglucose-1,3-alpha-glucan glucosyltransferase activity","type":"related"}],"termid":"GO:0047657","terms_by_termid":{"GO:0047657":null}}


id: PBO:0082353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase; a hexameric enzyme, catalyzes the first step in histidine biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts; transcription is regulated by general amino acid control","termid":"PBO:0082353"}


id: GO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the adherens junction.","definition_xrefs":["GOC:mah","GOC:aruk","GOC:BHF","PMID:26412237","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to adherens junction","secondary_identifiers":["GO:1904696"],"synonyms":[{"name":"protein localisation in adherens junction","type":"exact"},{"name":"protein localisation in cell-cell adherens junction","type":"exact"},{"name":"protein localisation to adherens junction","type":"exact"},{"name":"protein localisation to cell-cell adherens junction","type":"exact"},{"name":"protein localization in adherens junction","type":"exact"},{"name":"protein localization in cell-cell adherens junction","type":"exact"},{"name":"protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:0071896"}


id: PR:Q9HDU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.14c gene.","definition_xrefs":["UniProtKB:Q9HDU1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein PB2B2.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.14c","synonyms":[{"name":"Spom972h-SPBPB2B2.14c","type":"exact"}],"termid":"PR:Q9HDU1"}


id: GO:0018315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a molybdenum-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation into molybdenum-molybdopterin complex","secondary_identifiers":["GO:0042041"],"synonyms":[{"name":"molybdenum incorporation into metallo-pterin complex","type":"exact"}],"termid":"GO:0018315"}


id: PBO:0088280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 6 Pam1","termid":"PBO:0088280"}


id: PBO:0068575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 26, pseudogene","termid":"PBO:0068575"}


id: PBO:0078613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64D, pseudogene","termid":"PBO:0078613"}


id: PBO:0077681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 12","termid":"PBO:0077681"}


id: SO:0001032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a mitochondria.","direct_ancestors":[{"relation_name":"has_quality","term_name":"DNA","termid":"SO:0000352"},{"relation_name":"is_a","term_name":"mitochondrial_sequence","termid":"SO:0000737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_DNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Mitochondrial_DNA"],"synonyms":[{"name":"mitochondrial DNA","type":"exact"},{"name":"mtDNA","type":"exact"}],"termid":"SO:0001032"}


id: PBO:0046875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3D antisense RNA 1","termid":"PBO:0046875"}


id: GO:0047291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytolipin-H + CMP-N-acetylneuraminate = alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + CMP. Alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide is also known as GM3.","definition_xrefs":["EC:2.4.3.9","MetaCyc:2.4.99.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lactosylceramide alpha-2,3-sialyltransferase activity","secondary_identifiers":["RHEA:18417"],"synonyms":[{"name":"CMP-acetylneuraminate-lactosylceramide-sialyltransferase","type":"broad"},{"name":"GM3 synthase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-lactosylceramide alpha2,3- sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-lactosylceramide sialyltransferase","type":"broad"},{"name":"ganglioside GM3 synthase activity","type":"related"}],"termid":"GO:0047291"}


id: PBO:0029966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_hydroxyurea","termid":"PBO:0029966"}


id: GO:0010751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitric oxide mediated signal transduction","termid":"GO:0010749"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"negative regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010751"}


id: FYPO:0003464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during cellular response to heat","synonyms":[{"name":"decreased neutral trehalase activity during cellular response to heat","type":"exact"},{"name":"decreased trehalase activity during cellular response to heat","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during cellular response to heat","type":"exact"}],"termid":"FYPO:0003464"}


id: PBO:0052634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 2","termid":"PBO:0052634"}


id: PBO:0084011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen phosphorylase required for the mobilization of glycogen; non-essential; regulated by cyclic AMP-mediated phosphorylation; phosphorylation by Cdc28p may coordinately regulate carbohydrate metabolism and the cell cycle; expression is regulated by stress-response elements and by the HOG MAP kinase pathway","termid":"PBO:0084011"}


id: GO:0050316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + dGMP = ADP + dGDP, and ATP + dTMP = ADP + dTDP.","definition_xrefs":["EC:2.7.4.12","MetaCyc:T2-INDUCED-DEOXYNUCLEOTIDE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"T2-induced deoxynucleotide kinase activity","secondary_identifiers":["RHEA:12697","MetaCyc:GMKALT-RXN"],"synonyms":[{"name":"ATP:(d)NMP phosphotransferase activity","type":"related"}],"termid":"GO:0050316"}


id: PBO:0038422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-macroglobulin","termid":"PBO:0038422"}


id: GO:0071523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a TIR domain interaction.","definition_xrefs":["GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete TIR domain-mediated complex assembly (obsolete GO:0071523)","termid":"GO:0071523"}


id: PBO:0067272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 350, pseudogene","termid":"PBO:0067272"}


id: GO:0000118
data:
  {"annotated_genes":["SJAG_03230","SJAG_03694","SJAG_02500","SJAG_01465","SJAG_03441","SJAG_04596","SJAG_00581","SJAG_03628","SJAG_04194","SJAG_04758","SJAG_03982","SJAG_00349","SJAG_03145","SJAG_00441","SJAG_02466","SJAG_00934","SJAG_02571","SJAG_01513","SJAG_04186","SJAG_02981","SJAG_04576","SJAG_05282","SJAG_03036","SJAG_03579","SJAG_04355","SJAG_04097","SJAG_03627","SJAG_04389","SJAG_03884","SJAG_01110","SJAG_01804","SJAG_03255","SJAG_02778","SJAG_02846","SJAG_02990","SJAG_02385","SJAG_04396","SJAG_01926","SJAG_02798","SJAG_03685","SJAG_00868","SJAG_01230","SJAG_03844","SJAG_05192"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111376,90824,98031,109300,90035,100235,104617,84637,105598,93993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990483"},{"annotations":[64407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070823"},{"annotations":[92583,90827,74945,100238,105600,109301,104619,76089,98034,101945,90036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033698"},{"annotations":[90828,76090,76812,77178,84638,74143,88646,100239,109302,109213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070210"},{"annotations":[72414,75459,89194,90829,104621,72477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032221"},{"annotations":[77643,88647,99439,77177,92575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034967"},{"annotations":[103338,108370,107209,71251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[112436,83547,93572,94285,108397,107338,108233,96971,78458,73072,75914,87808,92014,104224,103064,109768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses histone deacetylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_00934":null,"SJAG_01110":null,"SJAG_01230":null,"SJAG_01465":null,"SJAG_01513":null,"SJAG_01804":null,"SJAG_01926":null,"SJAG_02385":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02571":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03579":null,"SJAG_03627":null,"SJAG_03628":null,"SJAG_03685":null,"SJAG_03694":null,"SJAG_03844":null,"SJAG_03884":null,"SJAG_03982":null,"SJAG_04097":null,"SJAG_04186":null,"SJAG_04194":null,"SJAG_04355":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04758":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"histone deacetylase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"HDAC complex","type":"exact"}],"termid":"GO:0000118","terms_by_termid":{"GO:0000812":null,"GO:0032221":null,"GO:0033698":null,"GO:0034967":null,"GO:0070210":null,"GO:0070823":null,"GO:0070824":null,"GO:1990483":null}}


id: PBO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein (predicted)","termid":"PBO:0000606"}


id: PBO:0066816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 115","termid":"PBO:0066816"}


id: PBO:0053289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 2","termid":"PBO:0053289"}


id: FYPO:0005637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of the first meiotic nuclear division begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of metaphase/anaphase transition of meiosis I","synonyms":[{"name":"normal duration of meiosis I metaphase","type":"related"},{"name":"normal duration of metaphase during meiosis I","type":"related"},{"name":"normal onset of meiosis I metaphase/anaphase transition","type":"exact"},{"name":"normal onset of metaphase/anaphase transition of first meiotic nuclear division","type":"exact"},{"name":"normal timing of meiosis I metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0005637"}


id: FYPO:0001461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases normally immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PomBase:mah","PMID:21811607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001461"}


id: FYPO:0002661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose 6-phosphate level","termid":"FYPO:0002660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose 6-phosphate level during heat shock","synonyms":[{"name":"decreased cellular trehalose 6-phosphate level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose 6-phosphate level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased cellular trehalose-6P level during heat shock","type":"exact"},{"name":"decreased trehalose 6-phosphate accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose 6-phosphate level during heat shock","type":"exact"}],"termid":"FYPO:0002661"}


id: PBO:0110502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF10B antisense RNA 1","termid":"PBO:0110502"}


id: RO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l ","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_along","termid":"RO:0002341"}


id: PBO:0084940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopper oxidase; integral membrane protein with similarity to Fet3p; may have a role in iron transport","termid":"PBO:0084940"}


id: GO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein heavy chain (obsolete GO:0001687)","synonyms":[{"name":"cytoplasmic dynein heavy chain","type":"exact"}],"termid":"GO:0001687"}


id: PBO:0071235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 76","termid":"PBO:0071235"}


id: GO:0060638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling","synonyms":[{"name":"mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060638"}


id: PBO:0029781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_abnormal_septum","termid":"PBO:0029781"}


id: GO:0005353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fructose transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-189222","GO:0015585","GO:0019192"],"synonyms":[{"name":"fructose permease activity","type":"exact"},{"name":"fructose porter activity","type":"exact"}],"termid":"GO:0005353"}


id: PBO:0072495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 24","termid":"PBO:0072495"}


id: MOD:00374
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 3,4-dihydroxy-L-arginine.","definition_xrefs":["PubMed:10978343","PubMed:12686488","ChEBI:141829","Unimod:425#R","RESID:AA0369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-L-arginine","synonyms":[{"name":"(2S,3Xi,4Xi)-2-amino-5-carbamimidamido-3,4-dihydroxypentanoic acid","type":"exact"},{"name":"2-amino-5-guanidino-3,4-dihydroxypentanoic acid","type":"exact"},{"name":"3,4-dihydroxy-L-arginine","type":"exact"},{"name":"3,4-dihydroxylated L-arginine","type":"exact"},{"name":"34Hy2Arg","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES 3,4-dihydroxyarginine","type":"exact"},{"name":"beta,gamma-dihydroxyarginine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00374"}


id: GO:0043815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + ATP + 5'-phospho-ribosylglycinamide = 5'-phosphoribosyl-N-formylglycinamide + ADP + diphosphate.","definition_xrefs":["EC:2.1.2.2","PMID:8117714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase 2 activity","secondary_identifiers":["MetaCyc:GARTRANSFORMYL2-RXN","RHEA:24829"],"synonyms":[{"name":"5'-phosphoribosylglycinamide transformylase 2","type":"exact"},{"name":"GAR transformylase 2","type":"related"},{"name":"GART 2","type":"related"},{"name":"formate-dependent GAR transformylase activity","type":"exact"}],"termid":"GO:0043815"}


id: PBO:0083682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress","termid":"PBO:0083682"}


id: PBO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Duo1","termid":"PBO:0004210"}


id: PBO:0066434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated endocrine specific protein 18","termid":"PBO:0066434"}


id: FYPO:0001551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to zinc ion starvation is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during cellular response to zinc ion starvation","synonyms":[{"name":"increased protein accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"increased protein level during cellular response to zinc ion depletion","type":"exact"},{"name":"increased protein level during cellular response to zinc ion deprivation","type":"exact"},{"name":"increased protein level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to zinc starvation","type":"exact"}],"termid":"FYPO:0001551"}


id: PBO:0027637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_separation","termid":"PBO:0027637"}


id: PBO:0061750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative expression of androgen receptor regulating lncRNA","termid":"PBO:0061750"}


id: PBO:0017855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase (predicted)","termid":"PBO:0017855"}


id: GO:0061578
data:
  {"annotated_genes":["SJAG_01528","SJAG_01281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77633,91907],"is_not":false,"summary":null,"term":"GO:0061578"}]},"cv_name":"molecular_function","definition":"Hydrolysis of a ubiquitin unit from a ubiquitinated protein linked via the Lys63 residue of ubiquitin.","definition_xrefs":["GOC:dph","GOC:pg","PMID:18313383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01281":null,"SJAG_01528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0016787","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"K63-linked deubiquitinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696547","Reactome:R-HSA-8869506","Reactome:R-HSA-5691439","Reactome:R-HSA-936390","Reactome:R-HSA-688136","Reactome:R-HSA-5691431","Reactome:R-HSA-741411","Reactome:R-HSA-9711016","Reactome:R-HSA-9817400","Reactome:R-HSA-5691411","Reactome:R-HSA-9685219","Reactome:R-HSA-5690856","Reactome:R-HSA-9750942","Reactome:R-HSA-5357845","Reactome:R-HSA-936381"],"synonyms":[{"name":"K63-specific deubiquitinase activity","type":"exact"},{"name":"Lys63-specific deubiquitinase activity","type":"exact"}],"termid":"GO:0061578","terms_by_termid":{"GO:0061578":null}}


id: PBO:0065226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 7, synaptic","termid":"PBO:0065226"}


id: GO:1902009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toxin transport.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:22792315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of toxin transport","termid":"GO:1902007"},{"relation_name":"positively_regulates","term_name":"toxin transport","termid":"GO:1901998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toxin transport","synonyms":[{"name":"activation of toxin transport","type":"narrow"},{"name":"up regulation of toxin transport","type":"exact"},{"name":"up-regulation of toxin transport","type":"exact"},{"name":"upregulation of toxin transport","type":"exact"}],"termid":"GO:1902009"}


id: PBO:0057772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR2117 host gene","termid":"PBO:0057772"}


id: PBO:0043683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fate and sterol metabolism associated divergent transcript of MOCOS","termid":"PBO:0043683"}


id: PBO:0080669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 21, pseudogene","termid":"PBO:0080669"}


id: PBO:0080450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSIG10L antisense RNA 1","termid":"PBO:0080450"}


id: PBO:0056421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1 pseudogene 2","termid":"PBO:0056421"}


id: PBO:0069222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 477, pseudogene","termid":"PBO:0069222"}


id: PBO:0080368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanin 2","termid":"PBO:0080368"}


id: PBO:0109038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP69 pseudogene 1","termid":"PBO:0109038"}


id: FYPO:0002660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose 6-phosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular trehalose 6-phosphate level","synonyms":[{"name":"decreased cellular trehalose 6-phosphate accumulation","type":"related"},{"name":"decreased cellular trehalose-6P level","type":"exact"},{"name":"reduced cellular trehalose 6-phosphate level","type":"exact"}],"termid":"FYPO:0002660"}


id: PBO:0054666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2072","termid":"PBO:0054666"}


id: PBO:0055624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3063","termid":"PBO:0055624"}


id: PR:Q9UUB6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase isozyme L5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02737","PANTHER:PTHR10589:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Uch2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.06","secondary_identifiers":["UniProtKB:Q9UUB6"],"synonyms":[{"name":"SPBC409.06","type":"related"},{"name":"Spom972h-UCHL5","type":"exact"}],"termid":"PR:Q9UUB6"}


id: PBO:0041907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene C","termid":"PBO:0041907"}


id: PBO:0067805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 107","termid":"PBO:0067805"}


id: GO:0009071
data:
  {"annotated_genes":["SJAG_03641","SJAG_00830","SJAG_02901","SJAG_01271","SJAG_03290","SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[76686,83003,73475,91769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[76258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006565"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_01271":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"serine family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid breakdown","type":"exact"},{"name":"serine family amino acid catabolism","type":"exact"},{"name":"serine family amino acid degradation","type":"exact"}],"termid":"GO:0009071","terms_by_termid":{"GO:0006546":null,"GO:0006565":null,"GO:0019464":null}}


id: PBO:0054889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2303","termid":"PBO:0054889"}


id: PBO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 1","termid":"PBO:0048801"}


id: PBO:0047429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 rRNA-processing protein","termid":"PBO:0047429"}


id: GO:1902854
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89814],"is_not":false,"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear migration during mitotic telophase.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear migration along microtubule","termid":"GO:1902840"},{"relation_name":"is_a","term_name":"regulation of nuclear migration during mitotic telophase","termid":"GO:1902852"},{"relation_name":"positively_regulates","term_name":"nuclear migration during mitotic telophase","termid":"GO:0090561"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear migration during mitotic telophase","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nuclear migration during mitotic telophase","type":"narrow"},{"name":"up regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"up-regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"upregulation of nuclear migration during mitotic telophase","type":"exact"}],"termid":"GO:1902854","terms_by_termid":{"GO:1902854":null}}


id: PBO:0076113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX18 antisense RNA 1 (head to head)","termid":"PBO:0076113"}


id: FYPO:0005135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to linear element","synonyms":[{"name":"normal protein localisation to linear element","type":"exact"}],"termid":"FYPO:0005135"}


id: PBO:0049919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif like","termid":"PBO:0049919"}


id: PBO:0052130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 2","termid":"PBO:0052130"}


id: GO:1990323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXIV) chains; type XXIV collagen triple helices may participate in regulating type I collagen fibrillogenesis at specific anatomical locations during fetal development.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XXIV trimer","termid":"GO:1990323"}


id: GO:0097143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of PUMA and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PUMA-BCL-xl complex","termid":"GO:0097143"}


id: PBO:0060785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B11","termid":"PBO:0060785"}


id: PR:Q10312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp40 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6C3.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.09","synonyms":[{"name":"Spom972h-rpp40","type":"exact"}],"termid":"PR:Q10312"}


id: PBO:0011999
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as a pseudogene","termid":"PBO:0011999"}


id: FYPO:0006815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K14 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3K14 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006815"}


id: GO:0032735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-12 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-12 production","termid":"GO:0032655"},{"relation_name":"positively_regulates","term_name":"interleukin-12 production","termid":"GO:0032615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-12 production","secondary_identifiers":["GO:0045084","GO:2001184"],"synonyms":[{"name":"activation of interleukin-12 production","type":"narrow"},{"name":"positive regulation of CLMF production","type":"related"},{"name":"positive regulation of IL-12 production","type":"exact"},{"name":"positive regulation of NKSF production","type":"related"},{"name":"positive regulation of interleukin-12 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-12 secretion","type":"narrow"},{"name":"stimulation of interleukin-12 production","type":"narrow"},{"name":"up regulation of interleukin-12 production","type":"exact"},{"name":"up-regulation of interleukin-12 production","type":"exact"},{"name":"upregulation of interleukin-12 production","type":"exact"}],"termid":"GO:0032735"}


id: GO:0021917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of unspecified motor neurons to specific motor neuron cell along the anterior-posterior axis of the spinal cord and their capacity to differentiate into specific motor neurons.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:cls","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic motor neuron fate commitment","termid":"GO:0021917"}


id: GO:0070304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070302"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of stress-activated protein kinase signaling cascade","synonyms":[{"name":"activation of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"positive regulation of SAPK signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated protein kinase signalling pathway","type":"exact"},{"name":"stimulation of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"up regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"up-regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"upregulation of stress-activated protein kinase signaling pathway","type":"exact"}],"termid":"GO:0070304"}


id: GO:2000029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proanthocyanidin biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"proanthocyanidin biosynthetic process","termid":"GO:0010023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of proanthocyanidin biosynthetic process","synonyms":[{"name":"regulation of proanthocyanidin anabolism","type":"exact"},{"name":"regulation of proanthocyanidin biosynthesis","type":"exact"},{"name":"regulation of proanthocyanidin formation","type":"exact"},{"name":"regulation of proanthocyanidin synthesis","type":"exact"}],"termid":"GO:2000029"}


id: FYPO:0005706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is longer than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["PomBase:mah","GO:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic anaphase","termid":"FYPO:0000618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic anaphase B","synonyms":[{"name":"delayed mitotic anaphase B progression","type":"related"},{"name":"increased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"increased duration of mitotic anaphase B progression","type":"exact"},{"name":"prolonged mitotic anaphase B","type":"exact"}],"termid":"FYPO:0005706"}


id: PBO:0039781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 8","termid":"PBO:0039781"}


id: FYPO:0006901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a cell shrinks temporarily, but then recovers its original size.","definition_xrefs":["PMID:31116668","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"cell deflation and reinflation","synonyms":[{"name":"cell deflation and reinflation during mitotic cell cycle","type":"related"},{"name":"cell deflation and reinflation during vegetative growth","type":"exact"},{"name":"vegetative cell deflation and reinflation","type":"exact"}],"termid":"FYPO:0006901"}


id: PBO:0045777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECSIT signaling integrator","termid":"PBO:0045777"}


id: GO:2001135
data:
  {"annotated_genes":["SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83469],"is_not":false,"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocytic recycling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of endocytic recycling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of retrograde transport of endocytic vesicles","type":"related"}],"termid":"GO:2001135","terms_by_termid":{"GO:2001135":null}}


id: PBO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin (predicted)","termid":"PBO:0004951"}


id: PBO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_unknown","termid":"PBO:0034695"}


id: GO:0030959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of two peptidyl-tyrosines to form a 3'-(3'-L-tyrosinyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0367"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(3'-L-tyrosinyl)-L-tyrosine (obsolete GO:0030959)","termid":"GO:0030959"}


id: MOD:01858
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(N-acetylamino)glucosyl-L-cysteine.","definition_xrefs":["PubMed:21395300","ChEBI:61631","PubMed:21251913","RESID:AA0560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"S-(N-acetylamino)glucosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosylsulfanyl)propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (GlcNAc) cysteine","type":"exact"},{"name":"S-(N-acetylamino)glucosyl-L-cysteine","type":"exact"},{"name":"S-[(N-acetylamino)glycosyl]cysteine","type":"exact"},{"name":"S-[beta-D-(N-acetylamino)glucopyranosyl]cysteine","type":"exact"}],"termid":"MOD:01858"}


id: GO:0052193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on, within or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in symbiont environment (obsolete GO:0052193)","termid":"GO:0052193"}


id: GO:1902175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:mtg_apoptosis","PMID:11672522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902175"}


id: PBO:0026839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026839"}


id: PBO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in SREBP Cleavage","termid":"PBO:0006679"}


id: PBO:0090359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glycoside hydrolase, family 31","termid":"PBO:0090359"}


id: PBO:0054624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2029","termid":"PBO:0054624"}


id: PBO:0048465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase catalytic subunit","termid":"PBO:0048465"}


id: FYPO:0008066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is no longer arrested during G1 phase when phosphate is removed. Arrest may either occur under conditions where arrest is not a normal occurrence, or may progress differently from normal under conditions where arrest normally does take place.","definition_xrefs":["PMID:36779416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to phosphate starvation","termid":"FYPO:0008066"}


id: PBO:0034118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-helper_property","termid":"PBO:0034118"}


id: PBO:0000447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PHD finger","termid":"PBO:0000447"}


id: GO:0015889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cobalamin transport","synonyms":[{"name":"vitamin B12 transport","type":"exact"}],"termid":"GO:0015889"}


id: PBO:0089009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid elongase Elo2","termid":"PBO:0089009"}


id: PBO:0088894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RINT1 family protein","termid":"PBO:0088894"}


id: FYPO:0005485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an inositol phosphate phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"},{"relation_name":"is_a","term_name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished inositol phosphate phosphatase activity","synonyms":[{"name":"inositol phosphate phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0005485"}


id: PBO:0047830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 intronic transcript 1","termid":"PBO:0047830"}


id: PBO:0070390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor tyrosine kinase like orphan receptor 1","termid":"PBO:0070390"}


id: GO:0070402
data:
  {"annotated_genes":["SJAG_03476"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73568],"is_not":false,"summary":null,"term":"GO:0070402"}]},"cv_name":"molecular_function","definition":"Binding to the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NADP binding","termid":"GO:0050661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NADPH binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NADP (reduced) binding","type":"exact"},{"name":"reduced NADP binding","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0070402","terms_by_termid":{"GO:0070402":null}}


id: PBO:0090799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ASTRA complex, phosphatidylinositol pseudokinase Tra1","termid":"PBO:0090799"}


id: GO:2001270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis","synonyms":[{"name":"regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001270"}


id: PBO:0087588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches","termid":"PBO:0087588"}


id: PR:Q9URZ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma11 gene.","definition_xrefs":["UniProtKB:Q9URZ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase 16 kDa proteolipid subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC732.01","synonyms":[{"name":"Spom972h-vma11","type":"exact"},{"name":"V-ATPase 16 kDa proteolipid subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"proteolipid protein vma11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump 16 kDa proteolipid subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ8"}


id: GO:0048916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line over time, from its formation to the mature structure. The posterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the body and trunk of all fishes and most amphibians. The posterior lateral line develops from cranial ectodermal placodes situated behind the ear.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line development","termid":"GO:0048882"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line development","synonyms":[{"name":"PLL development","type":"exact"}],"termid":"GO:0048916"}


id: PBO:0054794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2208","termid":"PBO:0054794"}


id: GO:0034063
data:
  {"annotated_genes":["SJAG_03157","SJAG_16457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75624,108406],"is_not":false,"summary":null,"term":"GO:0034063"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:17392519","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03157":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"stress granule assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SG assembly","type":"exact"}],"termid":"GO:0034063","terms_by_termid":{"GO:0034063":null}}


id: MOD:01818
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two tryptophan residues to form 1'-(L-tryptophan-3'-yl)-L-tryptophan.","definition_xrefs":["PubMed:20600836","RESID:AA0544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(L-tryptophan-3'-yl)-L-tryptophan","synonyms":[{"name":"(2S,2'S)-3,3'-(3'H-1,3'-biindole-3,3'-diyl)bis(2-aminopropanoic acid)","type":"exact"},{"name":"1-(L-tryptophan-3-yl)-L-tryptophan","type":"exact"},{"name":"2-amino-3-[2-[2-amino-3-(2-carboxyethyl)-1H-indol-4-yl]-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"3-[(2S)-2-amino-2-carboxyethyl]-3-(3-[(2S)-2-amino-2-carboxyethyl]-1H-indol-2-yl)-1H-indole","type":"exact"},{"name":"3-[2-azanyl-2-carboxyethyl]-3-(3-[2-azanyl-2-carboxyethyl]-1H-indol-2-yl)-1H-indole","type":"exact"},{"name":"ditryptophan","type":"exact"}],"termid":"MOD:01818"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:sart","GOC:aruk","PMID:20080302","PMID:30280653","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: PBO:0060717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA6 divergent transcript","termid":"PBO:0060717"}


id: PBO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein-protein_interaction_phenotype","termid":"PBO:0036181"}


id: GO:1903669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["PMID:24390142","GO_REF:0000059","GOC:TermGenie","PMID:22711818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of receptor binding","termid":"GO:1900122"},{"relation_name":"is_a","term_name":"regulation of chemorepellent activity","termid":"GO:1903667"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemorepellent activity","synonyms":[{"name":"activation of chemorepellant activity","type":"narrow"},{"name":"activation of chemorepellent activity","type":"narrow"},{"name":"positive regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellent activity","type":"exact"},{"name":"up-regulation of chemorepellant activity","type":"exact"},{"name":"up-regulation of chemorepellent activity","type":"exact"},{"name":"upregulation of chemorepellant activity","type":"exact"},{"name":"upregulation of chemorepellent activity","type":"exact"}],"termid":"GO:1903669"}


id: PBO:0027019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nalidixic_acid","termid":"PBO:0027019"}


id: PR:Q9USS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyrazinamidase/nicotinamidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.20c","secondary_identifiers":["UniProtKB:Q9USS0"],"synonyms":[{"name":"NAMase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pncA","type":"exact"},{"name":"nicotine deamidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USS0"}


id: GO:0097256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-phenyllactate + NAD+ = 3-phenylpyruvate + H+ + NADH.","definition_xrefs":["RHEA:38351","PMID:10849007","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phenyllactate dehydrogenase activity","termid":"GO:0097256"}


id: GO:0048150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of an ether stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to ether","synonyms":[{"name":"behavioural response to ether","type":"exact"}],"termid":"GO:0048150"}


id: SO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing when a sequence, usually an mRNA is capped by the addition of a modified guanine nucleotide at the 5' end.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capped","termid":"SO:0000146"}


id: PBO:0086546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR209C is not an essential gene; partially overlaps uncharacterized gene YDR210W","termid":"PBO:0086546"}


id: FYPO:0001138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 5.8S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased mature 5.8S rRNA level","synonyms":[{"name":"decreased 5.8S rRNA level","type":"broad"},{"name":"decreased 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 5.8S rRNA accumulation","type":"related"},{"name":"decreased mature 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 5.8S rRNA transcript level","type":"exact"},{"name":"reduced mature 5.8S rRNA level","type":"exact"}],"termid":"FYPO:0001138"}


id: PBO:0080633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 1","termid":"PBO:0080633"}


id: PBO:0048308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 19","termid":"PBO:0048308"}


id: GO:1904557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-alanine across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine transport","termid":"GO:0015808"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-alanine transmembrane transport","termid":"GO:1904557"}


id: PBO:0057894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3198-1","termid":"PBO:0057894"}


id: GO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric loop of Henle over time, from its formation to the mature structure. The metanephric loop of Henle is a metanephric nephron tubule that connects the proximal convoluted tubule to the distal convoluted tubule in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loop of Henle development","termid":"GO:0072070"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric loop of Henle development","synonyms":[{"name":"metanephric intermediate tubule development","type":"exact"}],"termid":"GO:0072236"}


id: FYPO:0002150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which none of the cells in a population of spores are viable. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell population","termid":"FYPO:0002059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002059"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002059"],"is_obsolete":false,"name":"inviable spore population","synonyms":[{"name":"essential in spore population","type":"related"},{"name":"inviable population of spores","type":"exact"},{"name":"lethal in spore population","type":"exact"}],"termid":"FYPO:0002150"}


id: PBO:0078682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 15-1","termid":"PBO:0078682"}


id: PBO:0088374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5","termid":"PBO:0088374"}


id: PBO:0109005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 3 (pseudogene)","termid":"PBO:0109005"}


id: FYECO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"3'5'-cyclic AMP was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000063 absence of 3'5'-cyclic AMP (obsolete FYECO:0000063)","termid":"FYECO:0000063"}


id: PBO:0062181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 2","termid":"PBO:0062181"}


id: GO:0071486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to high light intensity","termid":"GO:0009644"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high light intensity","termid":"GO:0071486"}


id: GO:2000818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"negatively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myoblast proliferation","termid":"GO:2000818"}


id: PR:O94311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0743 protein C215.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.06c","synonyms":[{"name":"Spom972h-SPBC215.06c","type":"exact"}],"termid":"PR:O94311"}


id: PR:Q9P7N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vas2(aps1) gene.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit sigma-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.06c","secondary_identifiers":["UniProtKB:Q9P7N2"],"synonyms":[{"name":"SPAP27G11.06c","type":"related"},{"name":"Spom972h-vas2(aps1)","type":"exact"},{"name":"aps1","type":"related"},{"name":"sigma1-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"valproic acid-sensitive protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N2"}


id: PBO:0084449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannoprotein that is incorporated into the cell wall; incorporated via a glycosylphosphatidylinositol (GPI) anchor; involved in the retention of siderophore-iron in the cell wall","termid":"PBO:0084449"}


id: GO:0043705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanophycin, a non-protein, non-ribosomally produced amino acid polymer composed of an aspartic acid backbone and arginine side groups.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanophycin metabolic process","synonyms":[{"name":"cyanophycin metabolism","type":"exact"},{"name":"multi-L-arginyl-poly(L-aspartic acid) metabolism","type":"exact"}],"termid":"GO:0043705"}


id: GO:0018119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition of a nitric oxide (NO) group to the sulphur (S) atom of a cysteine residue in a protein, to form peptidyl-S-nitrosyl-L-cysteine.","definition_xrefs":["RESID:AA0230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nitrosylation","termid":"GO:0017014"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine S-nitrosylation","synonyms":[{"name":"S-nitrosylation","type":"exact"},{"name":"protein S-nitrosylation","type":"exact"}],"termid":"GO:0018119"}


id: GO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs), to facilitate the aggregation, arrangement and bonding together of proteins on RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.","definition_xrefs":["GOC:txnOH","PMID:16858867"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly (obsolete GO:0001129)","synonyms":[{"name":"TATA-binding protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly","type":"narrow"},{"name":"TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly","type":"exact"}],"termid":"GO:0001129"}


id: PR:O94346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine biosynthesis bifunctional protein ArgJ, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.14","synonyms":[{"name":"Spom972h-SPBC1271.14","type":"exact"}],"termid":"PR:O94346"}


id: GO:0047238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP.","definition_xrefs":["EC:2.4.1.175","MetaCyc:2.4.1.175-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1971487","MetaCyc:RXN-16325","Reactome:R-HSA-9632033","Reactome:R-HSA-3595176","Reactome:R-HSA-1971482"],"synonyms":[{"name":"N-acetylgalactosaminyltransferase II activity","type":"exact"},{"name":"UDP-N-acetyl-D-galactosamine:D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-galactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"chondroitin synthase activity","type":"related"},{"name":"glucuronyl-N-acetylgalactosaminylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"glucuronyl-N-acetylgalactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-chondroitin acetylgalactosaminyltransferase II activity","type":"related"}],"termid":"GO:0047238"}


id: PBO:0090320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase","termid":"PBO:0090320"}


id: PBO:0043962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma G, pseudogene","termid":"PBO:0043962"}


id: GO:0099176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by a trans-synaptic complex.","definition_xrefs":["GOC:dos","PMID:23209303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"retrograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of retrograde trans-synaptic signaling by trans-synaptic protein complex","synonyms":[{"name":"regulation of trans-synaptic complex mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:0099176"}


id: FYPO:0001868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylyl cyclase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal adenylyl cyclase activity","termid":"FYPO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased adenylyl cyclase activity","synonyms":[{"name":"decreased adenylate cyclase activity","type":"exact"},{"name":"reduced adenylyl cyclase activity","type":"exact"}],"termid":"FYPO:0001868"}


id: MOD:01855
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds two oxygen atoms to a sulfur atom of a residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur dioxygenated residue","termid":"MOD:01855"}


id: GO:0097470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Type of synapse characterized by an electron-dense ribbon, lamella (bar) or spherical body in the presynaptic process cytoplasm.","definition_xrefs":["NIF_Subcellular:sao1884931180","PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ribbon synapse","synonyms":[{"name":"synapsis fasciolaris","type":"exact"}],"termid":"GO:0097470"}


id: GO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with oncostatin-M and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"oncostatin-M receptor activity","termid":"GO:0004924"}


id: PR:O60162
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sac11 gene.","definition_xrefs":["UniProtKB:O60162","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19F5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.03","synonyms":[{"name":"Spom972h-sac11","type":"exact"}],"termid":"PR:O60162"}


id: SO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by the dye terminator method of sequencing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dye_terminator_read","synonyms":[{"name":"dye terminator read","type":"related"}],"termid":"SO:0001423"}


id: GO:0008086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel that is activated in response to light. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"},{"relation_name":"is_a","term_name":"light-activated monoatomic ion channel activity","termid":"GO:0010461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"light-activated voltage-gated calcium channel activity","synonyms":[{"name":"light-activated voltage gated calcium channel activity","type":"exact"},{"name":"light-activated voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008086"}


id: SO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' five prime splice site region of the donor RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_site","termid":"SO:0001420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_donor_site","synonyms":[{"name":"5 prime trans splice site","type":"related"},{"name":"trans splice donor site","type":"exact"},{"name":"trans-splice donor site","type":"exact"}],"termid":"SO:0000707"}


id: GO:0035393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 9 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"CXCL9 production","type":"exact"},{"name":"MIG production","type":"exact"},{"name":"Monokine induced by gamma interferon production","type":"exact"}],"termid":"GO:0035393"}


id: GO:1904400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroid stimulating hormone stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11238928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Thyroid stimulating hormone","termid":"GO:1904400"}


id: PBO:0030677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_shape","termid":"PBO:0030677"}


id: GO:0009518
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex associated with photosystem I.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid light-harvesting complex","termid":"GO:0009503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PSI associated light-harvesting complex I","synonyms":[{"name":"LHCI","type":"exact"}],"termid":"GO:0009518"}


id: PBO:0003586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD transporter (predicted)","termid":"PBO:0003586"}


id: PBO:0030193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_aseptate_vegetative_cell","termid":"PBO:0030193"}


id: GO:0030110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-C subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["GOC:mah","PMID:9368779","PMID:11929129","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-C specific inhibitory MHC class I receptor activity","termid":"GO:0030110"}


id: PBO:0087595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; similar to S. pombe Tti1p; detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087595"}


id: GO:0036404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which double-stranded small interfering RNA (ds siRNA) molecules are converted to single-stranded small interfering RNA (ss siRNA).","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete conversion of ds siRNA to ss siRNA (obsolete GO:0036404)","synonyms":[{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA","type":"related"}],"termid":"GO:0036404"}


id: PBO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.13.-","termid":"PBO:0000633"}


id: PBO:0041597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 8","termid":"PBO:0041597"}


id: GO:0048623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed germinates before being shed from the parent plant.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed germination on parent plant","synonyms":[{"name":"non-vegetative vivipary","type":"broad"},{"name":"pre-harvest sprouting","type":"exact"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048623"}


id: PBO:0067148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 198, pseudogene","termid":"PBO:0067148"}


id: PR:000027617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:15660136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UnMod","type":"exact"}],"termid":"PR:000027617"}


id: PBO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 20","termid":"PBO:0052506"}


id: SO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles: Residue(i): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_nest_motif","termid":"SO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_left_right_motif","secondary_identifiers":["BS:00224"],"synonyms":[{"name":"nest_left_right","type":"exact"},{"name":"nest_lr","type":"exact"},{"name":"polypeptide nest left right motif","type":"exact"}],"termid":"SO:0001121"}


id: GO:0017101
data:
  {"annotated_genes":["SJAG_01259","SJAG_01197","SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70505,75587,76943],"is_not":false,"summary":null,"term":"GO:0017101"}]},"cv_name":"cellular_component","definition":"A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates.","definition_xrefs":["GOC:jl","PMID:16169847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_01197":null,"SJAG_01259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"aminoacyl-tRNA synthetase multienzyme complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aminoacyl-tRNA synthetase complex","type":"exact"},{"name":"multisynthetase complex","type":"exact"}],"termid":"GO:0017101","terms_by_termid":{"GO:0017101":null}}


id: PBO:0012560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 subunit Pre5 (predicted)","termid":"PBO:0012560"}


id: PBO:0058043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4264","termid":"PBO:0058043"}


id: FYPO:0004782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a greater extent than wild type following exposure to ionizing radiation.","definition_xrefs":["PMID:25533340","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores resistant to ionizing radiation","synonyms":[{"name":"resistant to ionizing radiation in spore phase","type":"exact"},{"name":"spores resistant to IR","type":"exact"}],"termid":"FYPO:0004782"}


id: GO:0090179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors that modulates the establishment of planar polarity contributing to neural tube closure.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"is_a","term_name":"regulation of establishment of planar polarity involved in neural tube closure","termid":"GO:0090178"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"planar cell polarity pathway involved in neural tube closure","termid":"GO:0090179"}


id: GO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via modification of peptidyl-cysteine to peptidyl-L-cysteine persulfide.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via cysteine modification to L-cysteine persulfide (obsolete GO:0018192)","synonyms":[{"name":"enzyme active site formation via L-cysteine persulphide","type":"exact"}],"termid":"GO:0018192"}


id: GO:0071818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found in mammals that transfers tail-anchored (TA) proteins from SGTA to GET3 (ASNA1/TRC4) for targeting to the endoplasmic reticulum membrane. Also chaperones polypeptides from the endoplasmic reticulum retrotranslocation machinery to the proteasome, maintaining the solubility of substrates to improve ER-associated protein degradation (ERAD). Consists of BAG6 (BAT3) and its cofactors GET4 (TRC35) and UBL4A.","definition_xrefs":["GOC:bm","PMID:20676083","PMID:21636303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"BAT3 complex","synonyms":[{"name":"BAG6-UBL4A-TRC35 complex","type":"exact"},{"name":"BAT3-TRC35-UBL4A complex","type":"related"},{"name":"Bag6 complex","type":"exact"}],"termid":"GO:0071818"}


id: PBO:0070314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 3","termid":"PBO:0070314"}


id: PR:Q65ZA5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19D5.10c gene.","definition_xrefs":["UniProtKB:Q65ZA5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19D5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.10c","synonyms":[{"name":"Spom972h-SPAC19D5.10c","type":"exact"}],"termid":"PR:Q65ZA5"}


id: GO:0035864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a potassium ion stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to potassium ion","synonyms":[{"name":"response to K+ ion","type":"exact"},{"name":"response to potassium","type":"exact"}],"termid":"GO:0035864"}


id: GO:2000630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of miRNA metabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"positively_regulates","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of miRNA metabolic process","synonyms":[{"name":"positive regulation of microRNA metabolic process","type":"exact"}],"termid":"GO:2000630"}


id: PR:G2TRP7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tom5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.19","synonyms":[{"name":"Spom972h-tom5","type":"exact"}],"termid":"PR:G2TRP7"}


id: PBO:0054699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2108","termid":"PBO:0054699"}


id: PBO:0049553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 15","termid":"PBO:0049553"}


id: MOD:00389
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-formyl-L-proline.","definition_xrefs":["PubMed:12051774","PubMed:5464655","RESID:AA0384","Unimod:122#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formyl-L-proline","synonyms":[{"name":"(2S)-1-formylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-formyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-formylproline","type":"exact"},{"name":"N-formyl-L-proline","type":"exact"},{"name":"N-formylated L-proline","type":"exact"},{"name":"NFoPro","type":"exact"}],"termid":"MOD:00389"}


id: PBO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ER retention signal","termid":"PBO:0000824"}


id: GO:0061837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a neuropeptide precursor. Processing leads to the attainment of the full functional capacity of the neuropeptide.","definition_xrefs":["PMID:17564681","PMID:12657671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"neuropeptide processing","termid":"GO:0061837"}


id: GO:2000938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellotriose metabolic process","termid":"GO:2000935"},{"relation_name":"is_a","term_name":"regulation of cellotriose catabolic process","termid":"GO:2000936"},{"relation_name":"positively_regulates","term_name":"cellotriose catabolic process","termid":"GO:2000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellotriose catabolic process","synonyms":[{"name":"positive regulation of cellotriose catabolism","type":"exact"}],"termid":"GO:2000938"}


id: PR:P0CG72
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A polyubiquitin-B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyubiquitin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.08c","secondary_identifiers":["UniProtKB:P0CG72"],"synonyms":[{"name":"SPBC337.08c","type":"related"},{"name":"Spom972h-UBB","type":"exact"}],"termid":"PR:P0CG72"}


id: PBO:0088242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 1","termid":"PBO:0088242"}


id: PBO:0085730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the regulation of endocytosis; transiently recruited to actin cortical patches in a SLA1-dependent manner after late coat component assembly; GFP-fusion protein localizes to the periphery, cytoplasm, bud, and bud neck","termid":"PBO:0085730"}


id: GO:0043077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acetate catabolic process","termid":"GO:0045754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"initiation of acetate catabolic process","synonyms":[{"name":"initiation of acetate breakdown","type":"exact"},{"name":"initiation of acetate catabolism","type":"exact"},{"name":"initiation of acetate degradation","type":"exact"}],"termid":"GO:0043077"}


id: CHEBI:48958
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,1'-azobis(N,N-dimethylformamide)","termid":"CHEBI:48958"}


id: GO:0061935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of double fertilization forming two zygotes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"double fertilization forming two zygotes","termid":"GO:0009677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in double fertilization forming two zygotes","termid":"GO:0061935"}


id: GO:0102501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate + NADP = NADPH + H+ + D-fructuronate.","definition_xrefs":["PMID:22925190","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-fructuronate reductase activity","secondary_identifiers":["MetaCyc:RXN-14368"],"termid":"GO:0102501"}


id: PR:O14218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 phosphatases regulator ypi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.13","synonyms":[{"name":"Spom972h-SPAC6B12.13","type":"exact"}],"termid":"PR:O14218"}


id: GO:1902874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of horizontal cell localization","termid":"GO:1902872"},{"relation_name":"positively_regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of horizontal cell localization","synonyms":[{"name":"activation of horizontal cell localisation","type":"narrow"},{"name":"activation of horizontal cell localization","type":"narrow"},{"name":"activation of horizontal cell positioning","type":"narrow"},{"name":"activation of laminar positioning of retinal horizontal cell","type":"narrow"},{"name":"activation of retinal horizontal cell positioning","type":"narrow"},{"name":"positive regulation of horizontal cell localisation","type":"exact"},{"name":"positive regulation of horizontal cell positioning","type":"exact"},{"name":"positive regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"positive regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up regulation of horizontal cell localisation","type":"exact"},{"name":"up regulation of horizontal cell localization","type":"exact"},{"name":"up regulation of horizontal cell positioning","type":"exact"},{"name":"up regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up-regulation of horizontal cell localisation","type":"exact"},{"name":"up-regulation of horizontal cell localization","type":"exact"},{"name":"up-regulation of horizontal cell positioning","type":"exact"},{"name":"up-regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up-regulation of retinal horizontal cell positioning","type":"exact"},{"name":"upregulation of horizontal cell localisation","type":"exact"},{"name":"upregulation of horizontal cell localization","type":"exact"},{"name":"upregulation of horizontal cell positioning","type":"exact"},{"name":"upregulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"upregulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902874"}


id: FYECO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hexestrol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ hexestrol","termid":"FYECO:0000348"}


id: FYPO:0000681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that has abnormal morphology and contains two diploid spores.","definition_xrefs":["PMID:11156975","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with fewer than four spores","termid":"FYPO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000121","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of two-spore ascus","synonyms":[{"name":"abnormal ascospore formation resulting in formation of two-spore ascus","type":"exact"},{"name":"abnormal sporulation resulting in formation of two-spore asci","type":"exact"}],"termid":"FYPO:0000681"}


id: PBO:0071496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34","termid":"PBO:0071496"}


id: PBO:0046180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 1","termid":"PBO:0046180"}


id: PBO:0083062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoyl transsuccinylase; component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA in the TCA cycle; phosphorylated","termid":"PBO:0083062"}


id: GO:0018959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic phenol-containing compound metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pba"],"synonyms":[{"name":"aerobic phenol-containing compound metabolism","type":"exact"}],"termid":"GO:0018959"}


id: FYPO:0003259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal proline import","synonyms":[{"name":"normal L-proline import","type":"exact"},{"name":"normal L-proline import across plasma membrane","type":"exact"},{"name":"normal proline import during mitotic cell cycle","type":"related"},{"name":"normal proline import during vegetative growth","type":"exact"},{"name":"normal proline import into cell","type":"exact"},{"name":"normal proline uptake","type":"exact"}],"termid":"FYPO:0003259"}


id: PBO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 17","termid":"PBO:0070276"}


id: FYPO:0007445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum is abnormal.","definition_xrefs":["GO:0061709","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal reticulophagy during vegetative growth","synonyms":[{"name":"abnormal ER autophagy during vegetative growth","type":"exact"},{"name":"abnormal ER degradation during vegetative growth","type":"related"},{"name":"abnormal ER-phagy during vegetative growth","type":"exact"},{"name":"abnormal endoplasmic reticulum autophagy during vegetative growth","type":"exact"},{"name":"abnormal reticulophagy during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007445"}


id: GO:0010858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a calcium-dependent protein kinase, an enzyme which phosphorylates a protein in a calcium-dependent manner.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent protein kinase regulator activity","termid":"GO:0010858"}


id: PBO:0057041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133a-1","termid":"PBO:0057041"}


id: GO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to somitogenesis.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in somitogenesis","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:0090243"}


id: GO:0007475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coming together of the dorsal and ventral surfaces of the imaginal disc-derived wing during the conversion of a folded single layered wing disc to a flat bilayered wing.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing margin morphogenesis","termid":"GO:0008587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apposition of dorsal and ventral imaginal disc-derived wing surfaces","synonyms":[{"name":"apposition of dorsal and ventral wing surfaces","type":"exact"}],"termid":"GO:0007475"}


id: PBO:0087087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L5; nascent Rpl5p is bound by specific chaperone Syo1p during translation; homologous to mammalian ribosomal protein L5 and bacterial L18; binds 5S rRNA and is required for 60S subunit assembly","termid":"PBO:0087087"}


id: PBO:0074330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCA5 antisense RNA 1","termid":"PBO:0074330"}


id: GO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of cells in the inner cell mass.","definition_xrefs":["GOC:dph","ISBN:0124020607","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner cell mass cell differentiation","termid":"GO:0001826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cellular morphogenesis","termid":"GO:0001828"}


id: PBO:0091374
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of RAs","termid":"PBO:0091374"}


id: GO:0098037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 5' protruding ends.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging, 5' extended cos packaging","termid":"GO:0098037"}


id: GO:1901954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23358451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"is_a","term_name":"regulation of retrograde axon cargo transport","termid":"GO:2001017"},{"relation_name":"regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"}


id: GO:0016844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = secologanin + tryptamine.","definition_xrefs":["EC:4.3.3.2","RHEA:15013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"strictosidine synthase activity","secondary_identifiers":["MetaCyc:STRICTOSIDINE-SYNTHASE-RXN","KEGG_REACTION:R03738"],"synonyms":[{"name":"3-alpha(S)-strictosidine tryptamine-lyase (secologanin-forming)","type":"related"},{"name":"3-alpha(S)-strictosidine tryptamine-lyase activity","type":"related"},{"name":"STR activity","type":"related"},{"name":"strictosidine synthetase activity","type":"related"}],"termid":"GO:0016844"}


id: PR:O94580
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- udp7 gene.","definition_xrefs":["UniProtKB:O94580","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin and WLM domain-containing metalloprotease SPCC1442.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.07c","synonyms":[{"name":"Spom972h-udp7","type":"exact"}],"termid":"PR:O94580"}


id: PBO:0085970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potentially phosphorylated by Cdc28p; YER158C has a paralog, AFR1, that arose from the whole genome duplication","termid":"PBO:0085970"}


id: PBO:0051610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 34","termid":"PBO:0051610"}


id: FYPO:0001305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of any long-chain fatty acid-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000002","FYPO:0005447","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abnormal lcfa-ligase activity","type":"exact"}],"termid":"FYPO:0001305"}


id: PBO:0005809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Mog1","termid":"PBO:0005809"}


id: FYPO:0007179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is detected abnormally distributed throughout the cell cortex during interphase of the mitotic cell cycle. The protein may normally be restricted to part of the cell cortex, or not normally located in the cell cortex at all.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"mislocalized protein distributed in cell cortex during mitotic interphase","synonyms":[{"name":"mislocalised protein distributed in cell cortex during mitotic interphase","type":"exact"},{"name":"mislocalized protein distributed at cell surface during mitotic interphase","type":"related"},{"name":"mislocalized protein distributed in cell cortex during interphase of mitotic cell cycle","type":"exact"},{"name":"mislocalized protein distributed in cell cortex during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007179"}


id: GO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal tolerance induction","termid":"GO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"tolerance induction in MALT","type":"exact"}],"termid":"GO:0002401"}


id: GO:0015651
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"quaternary ammonium group transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015202"],"synonyms":[{"name":"quaternary amine transmembrane transporter activity","type":"exact"},{"name":"quaternary ammonium compound transporter activity","type":"exact"}],"termid":"GO:0015651","terms_by_termid":{"GO:0090422":null}}


id: PR:O14356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tor1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase tor1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.10c","synonyms":[{"name":"PI3-kinase tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tor1","type":"exact"}],"termid":"PR:O14356"}


id: GO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010919"}


id: GO:0045203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:dos","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of cell outer membrane (obsolete GO:0045203)","synonyms":[{"name":"integral to cell outer membrane","type":"narrow"},{"name":"integral to external membrane","type":"related"},{"name":"integral to outer membrane","type":"related"}],"termid":"GO:0045203"}


id: GO:0014717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of satellite cell activation. The satellite cell activation is the process that initiates satellite cell division by causing it to move from quiescence to the G1 stage of the cell cycle. The cell swells and there are a number of other small changes. The cells then start to divide. Following cell division the cells will differentiate.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014717"}


id: FYPO:0007575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the medial cortical nodes for a shorter time than normal.","definition_xrefs":["PMID:25501814","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of protein localization to cell division site","termid":"FYPO:0002528"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased duration of protein localization to medial cortical node","synonyms":[{"name":"decreased duration of protein localisation to cytokinetic nodes","type":"exact"},{"name":"decreased duration of protein localisation to medial cortical dot","type":"exact"},{"name":"decreased duration of protein localisation to medial cortical node","type":"exact"},{"name":"decreased duration of protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"decreased duration of protein localization to medial cortical nodes","type":"exact"},{"name":"decreased duration of protein recruitment to medial cortical node","type":"related"},{"name":"reduced duration protein localization to medial cortical node","type":"exact"}],"termid":"FYPO:0007575"}


id: GO:0019550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including aspartate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"glutamate catabolic process to aspartate","secondary_identifiers":["MetaCyc:GLUTDEG-PWY"],"synonyms":[{"name":"glutamate breakdown to aspartate","type":"exact"},{"name":"glutamate degradation to aspartate","type":"exact"}],"termid":"GO:0019550"}


id: GO:0006660
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73643],"is_not":false,"summary":null,"term":"GO:0006660"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylserine catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphatidylserine breakdown","type":"exact"},{"name":"phosphatidylserine catabolism","type":"exact"},{"name":"phosphatidylserine degradation","type":"exact"}],"termid":"GO:0006660","terms_by_termid":{"GO:0006660":null}}


id: FYPO:0004304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased phosphatase activity","synonyms":[{"name":"reduced phosphatase activity","type":"exact"}],"termid":"FYPO:0004304"}


id: PBO:0062448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 115 pseudogene","termid":"PBO:0062448"}


id: GO:0051939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transport","termid":"GO:0015812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"gamma-aminobutyric acid import","synonyms":[{"name":"4-aminobutyrate import","type":"exact"},{"name":"GABA import","type":"exact"},{"name":"gamma-aminobutyrate import","type":"exact"},{"name":"gamma-aminobutyric acid uptake","type":"exact"}],"termid":"GO:0051939"}


id: GO:0060920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a pacemaker cell. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell differentiation","synonyms":[{"name":"pacemaker cell differentiation","type":"broad"}],"termid":"GO:0060920"}


id: PBO:0086946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor protein for the cytoplasm-to-vacuole targeting (Cvt) pathway; delivers cargo proteins aminopeptidase I (Ape1p) and alpha-mannosidase (Ams1p) to the phagophore assembly site for packaging into Cvt vesicles; interaction with Atg19p during the Cvt pathway requires phosphorylation by Hrr25p","termid":"PBO:0086946"}


id: PBO:0068753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 8, pseudogene","termid":"PBO:0068753"}


id: PBO:0060361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenin","termid":"PBO:0060361"}


id: PBO:0088260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit Sgf73","termid":"PBO:0088260"}


id: GO:0006188
data:
  {"annotated_genes":["SJAG_01814","SJAG_03355","SJAG_06634","SJAG_04681","SJAG_01081","SJAG_02850","SJAG_04123","SJAG_01661","SJAG_03140","SJAG_02364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109572,71221,75815,98669,69966,105380,93147,94865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[74608,97084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"IMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"IMP anabolism","type":"exact"},{"name":"IMP biosynthesis","type":"exact"},{"name":"IMP formation","type":"exact"},{"name":"IMP synthesis","type":"exact"}],"termid":"GO:0006188","terms_by_termid":{"GO:0006189":null,"GO:0032264":null}}


id: PBO:0059994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 14","termid":"PBO:0059994"}


id: GO:0015734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of taurine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate transport","termid":"GO:0042918"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"taurine transport","termid":"GO:0015734"}


id: GO:0001099
data:
  {"annotated_genes":["SJAG_00448","SJAG_02037","SJAG_01151","SJAG_02691","SJAG_03118","SJAG_01707","SJAG_00159","SJAG_01610","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[72084,76762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[70223,70756,75280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[76916,75438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[75314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery for RNA polymerase II which is composed of the RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits, and the basal RNA polymerase II transcription factors, the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal transcription machinery binding","termid":"GO:0001098"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00159":null,"SJAG_00448":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_02037":null,"SJAG_02691":null,"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"basal RNA polymerase II transcription machinery binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"basal RNAP II transcription machinery binding","type":"exact"}],"termid":"GO:0001099","terms_by_termid":{"GO:0000993":null,"GO:0001097":null,"GO:0001139":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.3.","definition_xrefs":["PMID:12575952","PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"Kv4.3-DPP6 channel complex","secondary_identifiers":["CORUM:599"],"synonyms":[{"name":"Kv4.3-DPPX channel complex","type":"exact"}],"termid":"GO:0071201"}


id: PBO:0048768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor beta pseudogene 1","termid":"PBO:0048768"}


id: SO:0001820
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A coding sequence variant where the change does not alter the frame of the transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_indel","synonyms":[{"name":"inframe change in CDS length","type":"exact"},{"name":"inframe indel","type":"exact"}],"termid":"SO:0001820"}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: PBO:0068221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 528","termid":"PBO:0068221"}


id: PBO:0073190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T pseudogene 1","termid":"PBO:0073190"}


id: GO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of organizing and assembling viral replication proteins in preparation for viral replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral replication complex formation and maintenance","termid":"GO:0046786"}


id: PBO:0044321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 1","termid":"PBO:0044321"}


id: PBO:0075864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 4","termid":"PBO:0075864"}


id: PBO:0084564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-embedded ubiquitin-protein ligase and retrotranslocase; ER and inner nuclear membrane localized RING-CH domain E3 ligase involved in ER-associated protein degradation (ERAD); aids Cdc48p in the extraction of faulty membrane proteins; targets misfolded cytosolic/nucleoplasmic domains of soluble and membrane embedded proteins (ERAD-C) and Sbh2p, a transmembrane domain-containing substrate (ERAD-M); C-terminal element, conserved in human ortholog MARCH6, determines substrate selectivity","termid":"PBO:0084564"}


id: PBO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A binding protein (predicted)","termid":"PBO:0004929"}


id: GO:0039620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=7 symmetry. The T=7 capsid is composed of 12 pentameric and 60 hexameric capsomeres.","definition_xrefs":["VZ:804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=7 icosahedral viral capsid","termid":"GO:0039620"}


id: PBO:0041037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated protein","termid":"PBO:0041037"}


id: GO:1990548
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102752],"is_not":false,"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The process in which FAD is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14555654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD transmembrane transport","termid":"GO:0035350"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrial FAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990548","terms_by_termid":{"GO:1990548":null}}


id: SO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 2 bases long that is included as part of two separate codons during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_translational_frameshift","synonyms":[{"name":"minus 2 ribosomal frameshift","type":"exact"},{"name":"minus 2 ribosomal slippage","type":"exact"},{"name":"minus 2 translational frameshift","type":"exact"}],"termid":"SO:0002330"}


id: GO:1905367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["PMID:26911690","GOC:TermGenie","GOC:bc","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of endosome organization","termid":"GO:1904980"},{"relation_name":"is_a","term_name":"regulation of intralumenal vesicle formation","termid":"GO:1905365"},{"relation_name":"positively_regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"positive regulation of intralumenal vesicle formation","synonyms":[{"name":"activation of endosome membrane budding","type":"narrow"},{"name":"activation of intralumenal vesicle formation","type":"narrow"},{"name":"positive regulation of endosome membrane budding","type":"exact"},{"name":"up regulation of endosome membrane budding","type":"exact"},{"name":"up regulation of intralumenal vesicle formation","type":"exact"},{"name":"up-regulation of endosome membrane budding","type":"exact"},{"name":"up-regulation of intralumenal vesicle formation","type":"exact"},{"name":"upregulation of endosome membrane budding","type":"exact"},{"name":"upregulation of intralumenal vesicle formation","type":"exact"}],"termid":"GO:1905367"}


id: GO:2000432
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"negatively_regulates","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"negative regulation of cytokinesis, actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of contractile ring assembly","type":"exact"}],"termid":"GO:2000432","terms_by_termid":{"GO:1903500":null}}


id: GO:1990143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex likely involved in the synthesis of coenzyme A (CoA). In S. cerevisiae, the complex consists of at least Cab2, Cab3, Cab4 and Cab5 but may also include Sis2 and Vhs3. The latter subunits are shared by the GO:0071513 phosphopantothenoylcysteine decarboxylase complex that catalyses the third step of the coenzyme A (CoA) biosynthetic pathway.","definition_xrefs":["GOC:rb","PMID:23789928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CoA-synthesizing protein complex","synonyms":[{"name":"CoA-SPC","type":"exact"},{"name":"coenzyme A-synthesizing protein complex","type":"exact"}],"termid":"GO:1990143"}


id: PBO:0058601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6733","termid":"PBO:0058601"}


id: PBO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHHADH antisense RNA 1","termid":"PBO:0045982"}


id: GO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage metabolic process","synonyms":[{"name":"root epithelial mucilage metabolism","type":"exact"}],"termid":"GO:0048361"}


id: PBO:0053828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1093","termid":"PBO:0053828"}


id: PBO:0030114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_processing","termid":"PBO:0030114"}


id: CHEBI:35176
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc sulfate","termid":"CHEBI:35176"}


id: PBO:0082041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2Fe-2S cytosolic protein of unknown function; bishistidinyl coordinated, non-Rieske [2Fe-2S] cluster containing thiredoxin-like ferredoxin; required for normal localization of actin patches and for normal tolerance of sodium ions and hydrogen peroxide; green fluorescent protein (GFP)-fusion protein localizes to both the nucleus and the cytoplasm; homologous to AIM32","termid":"PBO:0082041"}


id: GO:0048564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a photosystem I complex on the thylakoid membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosystem I assembly","secondary_identifiers":["GO:0010251"],"termid":"GO:0048564"}


id: FYPO:0007566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:11927555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000337","FYPO:0000631"],"is_obsolete":false,"name":"premature mitotic chromosome condensation","synonyms":[{"name":"advanced mitotic chromosome condensation","type":"exact"},{"name":"premature chromosome condensation during mitotic cell cycle","type":"related"},{"name":"premature mitotic chromosome condensation during vegetative growth","type":"exact"}],"termid":"FYPO:0007566"}


id: PBO:0038350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_allergic_trigger_for","termid":"PBO:0038350"}


id: PBO:0069079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 326, pseudogene","termid":"PBO:0069079"}


id: PBO:0088765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone, gankyrin","termid":"PBO:0088765"}


id: PBO:0078381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 5, pseudogene","termid":"PBO:0078381"}


id: PBO:0054964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2378","termid":"PBO:0054964"}


id: PBO:0007025
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds PLD site 5'-AGTTTACGTAATCT-3'","termid":"PBO:0007025"}


id: PBO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 3","termid":"PBO:0061520"}


id: MOD:01797
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal 1'-phosphohistidine residue to 1'-phosphohistidine immonium ion.","definition_xrefs":["PubMed:17690871","PubMed:18688235","PubMed:20847263"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"1'-phospho-L-histidine","termid":"MOD:00044"},{"relation_name":"is_a","term_name":"phosphohistidine immonium ion","termid":"MOD:01791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-phosphohistidine immonium ion","synonyms":[{"name":"2-((1-phosphono-1H-imidazol-4-yl)ethaniminium","type":"exact"},{"name":"Ntau-phosphorylated L-histidine","type":"exact"}],"termid":"MOD:01797"}


id: GO:0000755
data:
  {"annotated_genes":["SJAG_01943","SJAG_00870","SJAG_04887","SJAG_02878","SJAG_04982","SJAG_02351","SJAG_02924"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87940,93065],"is_not":false,"summary":null,"term":"GO:0000755"},{"annotations":[105331,90670,87789,76566,91733],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"During conjugation with cellular fusion, the process resulting in creating a single cell from complementary mating types. The localized remodeling and dissolution of external protective structures allow the fusion of the plasma membranes and cytoplasmic mixing. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_01943":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"cytogamy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030462","GO:0000218"],"synonyms":[{"name":"zygote formation","type":"related"}],"termid":"GO:0000755","terms_by_termid":{"GO:0000755":null,"GO:0032220":null}}


id: PBO:0049272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 alpha","termid":"PBO:0049272"}


id: FYECO:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which adenine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited adenine","secondary_identifiers":["PMID:7565608"],"termid":"FYECO:0000021"}


id: PBO:0047133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member A2","termid":"PBO:0047133"}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: PBO:0038640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 7","termid":"PBO:0038640"}


id: GO:1904175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:24843136","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904175)","synonyms":[{"name":"activation of histone demethylase activity (H3-K4 specific)","type":"narrow"},{"name":"up regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"up-regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"upregulation of histone demethylase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:1904175"}


id: PBO:0085728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation","termid":"PBO:0085728"}


id: PBO:0080243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 6, pseudogene","termid":"PBO:0080243"}


id: GO:0141130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation of mRNA into protein in its host by inactivating its ribosomes.","definition_xrefs":["PMID:1324134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated inactivation of host ribosome","synonyms":[{"name":"symbiont-mediated host ribosome inactivation","type":"exact"}],"termid":"GO:0141130"}


id: GO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which phosphoglycerate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phosphoglycerate transmembrane transport","synonyms":[{"name":"phosphoglycerate transport","type":"related"}],"termid":"GO:0015713"}


id: GO:0102330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + a palmitoyl-[acp] = 1-heptadecene + 2 carbon dioxide + coenzyme A + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"palmitoyl-[acp] elongase/decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-13258"],"termid":"GO:0102330"}


id: GO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD151.","definition_xrefs":["PMID:11884516","PMID:10811835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD151 complex","synonyms":[{"name":"ITGA3-ITGB1-CD151 complex","type":"narrow"}],"termid":"GO:0071058"}


id: PBO:0089454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ria1","termid":"PBO:0089454"}


id: GO:0047774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = cis-2,3-dehydroacyl-CoA + NADPH.","definition_xrefs":["EC:1.3.1.37","MetaCyc:CIS-2-ENOYL-COA-REDUCTASE-NADPH-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cis-2-enoyl-CoA reductase (NADPH) activity","synonyms":[{"name":"NADPH-dependent cis-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ cis-2-oxidoreductase activity","type":"related"},{"name":"cis-2-enoyl-coenzyme A reductase activity","type":"related"},{"name":"reductase, cis-2-enoyl coenzyme A","type":"related"}],"termid":"GO:0047774"}


id: GO:0048312
data:
  {"annotated_genes":["SJAG_04003","SJAG_02848","SJAG_02384","SJAG_00655","SJAG_01741"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75216,75346,78184,102402,102609],"is_not":false,"summary":null,"term":"GO:0048312"}]},"cv_name":"biological_process","definition":"Any process that establishes the spatial arrangement of mitochondria within the cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01741":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intracellular distribution of mitochondria","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondria positioning within cell","type":"exact"},{"name":"mitochondrion positioning within cell","type":"exact"}],"termid":"GO:0048312","terms_by_termid":{"GO:0048312":null}}


id: GO:0075100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075100)","termid":"GO:0075100"}


id: GO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a glycolipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. A glycolipid is a compound usually containing 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid.","definition_xrefs":["PMID:30337668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"glycolipid transfer activity","secondary_identifiers":["Reactome:R-HSA-9845055","Reactome:R-HSA-5340320","Reactome:R-HSA-9844955","Reactome:R-HSA-9697077"],"synonyms":[{"name":"glycolipid carrier activity","type":"exact"},{"name":"glycolipid transporter activity","type":"broad"},{"name":"intermembrane glycolipid transfer activity","type":"narrow"},{"name":"intermembrane glycolipid transporter activity","type":"narrow"}],"termid":"GO:0017089"}


id: GO:0050504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + GDP-alpha-D-mannose = 2-(alpha-D-mannosyl)-3-phosphoglycerate + GDP + H+.","definition_xrefs":["RHEA:13537","EC:2.4.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannosyl-3-phosphoglycerate synthase activity","secondary_identifiers":["MetaCyc:2.4.1.217-RXN","KEGG_REACTION:R05768"],"synonyms":[{"name":"GDP-mannose:3-phosphoglycerate 3-alpha-D-mannosyltransferase activity","type":"related"},{"name":"MPG synthase activity","type":"related"}],"termid":"GO:0050504"}


id: PR:000027705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinesin-like motor protein klp9/SPBC15D4.01c unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:19686686","PMID:18257517","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin-like motor protein klp9/SPBC15D4.01c","termid":"PR:000027702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klp9/UnMod","pombase_gene_id":"SPBC15D4.01c","synonyms":[{"name":"Spom-klp9/UnMod","type":"exact"},{"name":"klp9/UnMod","type":"exact"}],"termid":"PR:000027705"}


id: PBO:0108701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp1","termid":"PBO:0108701"}


id: SO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence that can autonomously replicate, as a plasmid, when transformed into a bacterial host.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS","synonyms":[{"name":"autonomously replicating sequence","type":"exact"}],"termid":"SO:0000436"}


id: PBO:0041177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 2 member A2","termid":"PBO:0041177"}


id: FYPO:0000267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to ionizing radiation during vegetative growth","synonyms":[{"name":"decreased vegetative cell population growth during cellular response to ionizing radiation","type":"exact"},{"name":"hypersensitive to ionizing radiation during vegetative growth","type":"exact"},{"name":"sensitive to IR during vegetative growth","type":"exact"},{"name":"sensitive to gamma irradiation during vegetative growth","type":"narrow"},{"name":"sensitive to gamma radiation during vegetative growth","type":"narrow"},{"name":"sensitive to ionizing radiation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000267"}


id: GO:0017189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal alanine of proteins; catalyzed by peptide alpha-N-acetyltransferase or other enzymes of this class, such as ribosomal-protein-alanine N-acetyltransferase.","definition_xrefs":["RESID:AA0041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine acetylation","termid":"GO:0017189"}


id: GO:0021982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pineal gland over time from its initial formation until its mature state. The pineal gland is an endocrine gland that secretes melatonin and is involved in circadian rhythms.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pineal gland development","synonyms":[{"name":"epiphysis development","type":"exact"}],"termid":"GO:0021982"}


id: GO:1900709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tensidol A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of tensidol A biosynthetic process","termid":"GO:1900707"},{"relation_name":"positively_regulates","term_name":"tensidol A biosynthetic process","termid":"GO:1900605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of tensidol A biosynthetic process","synonyms":[{"name":"activation of tensidol A anabolism","type":"exact"},{"name":"activation of tensidol A biosynthesis","type":"exact"},{"name":"activation of tensidol A biosynthetic process","type":"narrow"},{"name":"activation of tensidol A formation","type":"exact"},{"name":"activation of tensidol A synthesis","type":"exact"},{"name":"positive regulation of tensidol A anabolism","type":"exact"},{"name":"positive regulation of tensidol A biosynthesis","type":"exact"},{"name":"positive regulation of tensidol A formation","type":"exact"},{"name":"positive regulation of tensidol A synthesis","type":"exact"},{"name":"up regulation of tensidol A anabolism","type":"exact"},{"name":"up regulation of tensidol A biosynthesis","type":"exact"},{"name":"up regulation of tensidol A biosynthetic process","type":"exact"},{"name":"up regulation of tensidol A formation","type":"exact"},{"name":"up regulation of tensidol A synthesis","type":"exact"},{"name":"up-regulation of tensidol A anabolism","type":"exact"},{"name":"up-regulation of tensidol A biosynthesis","type":"exact"},{"name":"up-regulation of tensidol A biosynthetic process","type":"exact"},{"name":"up-regulation of tensidol A formation","type":"exact"},{"name":"up-regulation of tensidol A synthesis","type":"exact"},{"name":"upregulation of tensidol A anabolism","type":"exact"},{"name":"upregulation of tensidol A biosynthesis","type":"exact"},{"name":"upregulation of tensidol A biosynthetic process","type":"exact"},{"name":"upregulation of tensidol A formation","type":"exact"},{"name":"upregulation of tensidol A synthesis","type":"exact"}],"termid":"GO:1900709"}


id: GO:0032389
data:
  {"annotated_genes":["SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70580],"is_not":false,"summary":null,"term":"GO:0032389"}]},"cv_name":"cellular_component","definition":"A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS2.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MutLalpha complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MLH1/PMS2 complex","type":"exact"},{"name":"MMR complex","type":"broad"},{"name":"MutL-alpha complex","type":"exact"}],"termid":"GO:0032389","terms_by_termid":{"GO:0032389":null}}


id: FYPO:0003049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["SO:0000673","PMID:22582262","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"},{"relation_name":"output_of","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0003048","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased transcriptional readthrough","synonyms":[{"name":"3'-extended transcript","type":"related"},{"name":"increased transcript length by 3' extension","type":"related"},{"name":"increased transcript length due to transcriptional readthrough","type":"exact"},{"name":"poly(A) readthrough","type":"related"}],"termid":"FYPO:0003049"}


id: FYPO:0003341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"multinucleate","synonyms":[{"name":"multinucleate cells","type":"exact"},{"name":"multiple nuclei","type":"exact"}],"termid":"FYPO:0003341"}


id: GO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of one or more nucleotides.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide insertion","termid":"GO:0070705"}


id: GO:0047018
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87261],"is_not":false,"summary":null,"term":"GO:0047018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-ethanol + NAD+ = (indol-3-yl)acetaldehyde + H+ + NADH.","definition_xrefs":["RHEA:14873","EC:1.1.1.190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetaldehyde reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.1.1.190-RXN","KEGG_REACTION:R02679"],"synonyms":[{"name":"(indol-3-yl)ethanol:NAD+ oxidoreductase activity","type":"related"},{"name":"indole-3-ethanol:NAD+ oxidoreductase activity","type":"related"},{"name":"indoleacetaldehyde reductase activity","type":"related"}],"termid":"GO:0047018","terms_by_termid":{"GO:0047018":null}}


id: GO:0015148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-xylose from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transporter activity","termid":"GO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"D-xylose transmembrane transporter activity","termid":"GO:0015148"}


id: PBO:0061355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 13","termid":"PBO:0061355"}


id: GO:0060025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic activity, the controlled release of neurotransmitters into the synaptic cleft and their subsequent detection by a postsynaptic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"part_of","term_name":"regulation of synapse structure or activity","termid":"GO:0050803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic activity","termid":"GO:0060025"}


id: MOD:01155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a lipid-like group either through acylation, alkylation, or amidation.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoconjugated residue","termid":"MOD:01155"}


id: FYPO:0003160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during stationary phase","synonyms":[{"name":"long cell during stationary phase","type":"exact"}],"termid":"FYPO:0003160"}


id: GO:1900512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch utilization system complex assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"starch utilization system complex assembly","termid":"GO:0044574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of starch utilization system complex assembly","synonyms":[{"name":"regulation of SUS complex assembly","type":"exact"},{"name":"regulation of assembly of starch utilization system complex","type":"exact"}],"termid":"GO:1900512"}


id: PR:P87214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uroporphyrinogen-III synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01252","PRO:DNx","PANTHER:PTHR12390:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.08","secondary_identifiers":["UniProtKB:P87214"],"synonyms":[{"name":"Spom972h-UROS","type":"exact"},{"name":"UROIIIS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UROS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hydroxymethylbilane hydrolyase [cyclizing] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uroporphyrinogen-III cosynthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87214"}


id: PBO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Rix7 (predicted)","termid":"PBO:0003827"}


id: PBO:0085564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein distantly similar to ceramide synthases, Lag1p and Lac1p; null mutant is sensitive to expression of the top1-T722A allele; mutation confers sensitivity to copper","termid":"PBO:0085564"}


id: PBO:0048326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 37","termid":"PBO:0048326"}


id: FYPO:0005540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of telomerase RNA reverse transcriptase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal telomerase RNA reverse transcriptase activity","termid":"FYPO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0005447","FYPO:0000002","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased telomerase RNA reverse transcriptase activity","synonyms":[{"name":"decreased telomerase activity","type":"broad"},{"name":"reduced telomerase RNA reverse transcriptase activity","type":"exact"}],"termid":"FYPO:0005540"}


id: GO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.","definition_xrefs":["EC:3.5.1.25","MetaCyc:3.5.1.80-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0019213","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetylgalactosamine-6-phosphate deacetylase activity","secondary_identifiers":["RHEA:18149"],"termid":"GO:0047419"}


id: GO:0070610
data:
  {"annotated_genes":["SJAG_00424","SJAG_04666","SJAG_00610","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84959,87859,90322,98103],"is_not":false,"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in fungal-type cell walls, including those of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall biogenesis","termid":"GO:0032995"},{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070608"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070609"},{"relation_name":"regulates","term_name":"fungal-type cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070600"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044085","GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"regulation of fungal-type cell wall (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of fungal type cell wall 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan anabolism","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan biosynthesis","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan biosynthetic process","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan formation","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0070610","terms_by_termid":{"GO:0070610":null}}


id: PBO:0073421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEZ6L antisense RNA 1","termid":"PBO:0073421"}


id: SO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome deficiency aberration generated by reassortment of other aberration components.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_deficiency","synonyms":[{"name":"assortment-derived deficiency","type":"exact"}],"termid":"SO:0000802"}


id: RO:0000058
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_concretized_as","termid":"RO:0000058"}


id: GO:0004768
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74251],"is_not":false,"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 + octadecanoyl-CoA = (9Z)-octadecenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:19721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"stearoyl-CoA 9-desaturase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0043735","Reactome:R-HSA-5690565","GO:0016214","EC:1.14.19.1","Reactome:R-HSA-8847579","MetaCyc:1.14.19.1-RXN"],"synonyms":[{"name":"acyl-CoA desaturase","type":"broad"},{"name":"delta(9)-desaturase activity","type":"broad"},{"name":"delta9-desaturase","type":"broad"},{"name":"fatty acid desaturase","type":"broad"},{"name":"stearoyl-CoA desaturase activity","type":"broad"}],"termid":"GO:0004768","terms_by_termid":{"GO:0004768":null}}


id: PBO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamidoimidazolesuccinocarboxamide synthase, SAICAR synthetase, Ade7","termid":"PBO:0003500"}


id: PBO:0038702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 15","termid":"PBO:0038702"}


id: PBO:0069394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 654, pseudogene","termid":"PBO:0069394"}


id: PR:O13998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An obg-like ATPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01661","PANTHER:PTHR23305:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obg-like ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.03c","secondary_identifiers":["UniProtKB:O13998"],"synonyms":[{"name":"Spom972h-OLA1","type":"exact"}],"termid":"PR:O13998"}


id: GO:0009195
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009195","terms_by_termid":{"GO:0006256":null}}


id: PBO:0071273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 7","termid":"PBO:0071273"}


id: PBO:0046166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF3 antisense RNA 1","termid":"PBO:0046166"}


id: GO:0003048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the catecholamine signaling molecule norepinephrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by norepinephrine","synonyms":[{"name":"blood pressure regulation by norepinephrine","type":"related"},{"name":"regulation of blood pressure by noradrenaline","type":"exact"}],"termid":"GO:0003048"}


id: GO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA.","definition_xrefs":["RHEA:24404","EC:4.1.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA lyase activity","secondary_identifiers":["MetaCyc:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN","Reactome:R-HSA-6788597","Reactome:R-HSA-74180","KEGG_REACTION:R01360"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutarate-CoA lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA cleaving enzyme","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase activity","type":"related"},{"name":"HMG-CoA lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-cleaving enzyme","type":"related"}],"termid":"GO:0004419"}


id: PATO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetism which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"magnetic","termid":"PATO:0001685"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased magnetism","synonyms":[{"name":"high magnetism","type":"exact"}],"termid":"PATO:0001683"}


id: PBO:0063752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 17","termid":"PBO:0063752"}


id: GO:0032166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Arrays of septin filaments, or bars, found in a series of filamentous structures. Observed in the chlamydospore membrane during chlamydospore formation.","definition_xrefs":["GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin filament array","termid":"GO:0032160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chlamydospore septin filament array","termid":"GO:0032166"}


id: PBO:0051892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA2 antisense RNA 1","termid":"PBO:0051892"}


id: PBO:0083962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General transcription elongation factor TFIIS; enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites; maintains RNAPII elongation activity on ribosomal protein genes during conditions of transcriptional stress","termid":"PBO:0083962"}


id: GO:0102626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: costunolide + NADPH + O2 + H+ = parthenolide + NADP(3-) + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"parthenolide synthase activity","secondary_identifiers":["MetaCyc:RXN-15531"],"termid":"GO:0102626"}


id: _global:encompasses
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"during_which_starts","termid":"_global:during_which_starts"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encompasses","secondary_identifiers":["RO:0002085"],"termid":"_global:encompasses"}


id: GO:0090564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucose(out) = protein cysteine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-phosphocysteine-glucose phosphotransferase system transporter activity","termid":"GO:0090564"}


id: PBO:0004204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase Gpx1","termid":"PBO:0004204"}


id: PBO:0109837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex, armadillo-type fold subunit Tti1","termid":"PBO:0109837"}


id: GO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur utilization","termid":"GO:0006792"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfur utilization","synonyms":[{"name":"activation of sulfur utilization","type":"narrow"},{"name":"positive regulation of sulphur utilization","type":"exact"},{"name":"stimulation of sulfur utilization","type":"narrow"},{"name":"up regulation of sulfur utilization","type":"exact"},{"name":"up-regulation of sulfur utilization","type":"exact"},{"name":"upregulation of sulfur utilization","type":"exact"}],"termid":"GO:0045883"}


id: PBO:0031043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0031043"}


id: GO:0043949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which modulates the frequency, rate or extent of cAMP-mediated signaling.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cAMP-mediated signaling","termid":"GO:0019933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cAMP-mediated signaling","synonyms":[{"name":"regulation of cAMP-mediated signalling","type":"exact"}],"termid":"GO:0043949"}


id: GO:0072180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric duct are generated and organized. A mesonephric duct is a tube drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"is_a","term_name":"nephric duct morphogenesis","termid":"GO:0072178"},{"relation_name":"part_of","term_name":"mesonephric duct development","termid":"GO:0072177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct morphogenesis","synonyms":[{"name":"Wolffian duct morphogenesis","type":"related"}],"termid":"GO:0072180"}


id: GO:0052907
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77349],"is_not":false,"summary":null,"term":"GO:0052907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(1618) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N(6)-methyladenine(1618) in 23S rRNA.","definition_xrefs":["EC:2.1.1.181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6-)-methyltransferase activity","termid":"GO:0008988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"23S rRNA (adenine(1618)-N(6))-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R07232","MetaCyc:RXN-11596","RHEA:16497"],"synonyms":[{"name":"M(6)A(1618) activity","type":"broad"},{"name":"rRNA large subunit methyltransferase F activity","type":"related"}],"termid":"GO:0052907","terms_by_termid":{"GO:0052907":null}}


id: GO:0019876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nylon, a polymer where the main polymer chain comprises recurring amide groups; these compounds are generally formed from combinations of diamines, diacids and amino acids.","definition_xrefs":["UniProtKB-KW:KW-0549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"nylon metabolic process","termid":"GO:0042198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"nylon catabolic process","synonyms":[{"name":"nylon breakdown","type":"exact"},{"name":"nylon catabolism","type":"exact"},{"name":"nylon degradation","type":"exact"}],"termid":"GO:0019876"}


id: GO:0018791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate = CO2 + 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate.","definition_xrefs":["UM-BBD_reactionID:r0398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate decarboxylase activity","termid":"GO:0018791"}


id: GO:0030730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sequestering of triglyceride","synonyms":[{"name":"retention of triacylglycerol","type":"exact"},{"name":"retention of triglyceride","type":"exact"},{"name":"sequestering of triacylglycerol","type":"exact"},{"name":"sequestration of triacylglycerol","type":"exact"},{"name":"sequestration of triglyceride","type":"exact"},{"name":"storage of triacylglycerol","type":"exact"},{"name":"storage of triglyceride","type":"exact"},{"name":"triacylglycerol retention","type":"exact"},{"name":"triacylglycerol sequestering","type":"exact"},{"name":"triacylglycerol sequestration","type":"exact"},{"name":"triacylglycerol storage","type":"exact"},{"name":"triglyceride retention","type":"exact"},{"name":"triglyceride sequestering","type":"exact"},{"name":"triglyceride sequestration","type":"exact"},{"name":"triglyceride storage","type":"exact"}],"termid":"GO:0030730"}


id: PBO:0051529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2 receptor subunit alpha","termid":"PBO:0051529"}


id: PBO:0090041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-plasma membrane tethering protein Ltc2","termid":"PBO:0090041"}


id: PBO:0038407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_regulates_activity_of","termid":"PBO:0038407"}


id: PATO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The period after death of the organism.","definition_xrefs":["thefreedictionary:thefreedictionary"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002084 post-mortem (obsolete PATO:0002084)","termid":"PATO:0002084"}


id: PBO:0063565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proenkephalin","termid":"PBO:0063565"}


id: GO:0015951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine ribonucleotide is synthesized from another purine ribonucleotide.","definition_xrefs":["GOC:mah","ISBN:0306444747","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine nucleotide interconversion","termid":"GO:0015950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleotide interconversion","termid":"GO:0015951"}


id: PBO:0017545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium ion transmembrane transporter (predicted)","termid":"PBO:0017545"}


id: GO:0015539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexuronate(out) + cation(out) = hexuronate(in) + cation(in). The hexuronate may be glucuronate or galacturonate.","definition_xrefs":["TC:2.A.1.14.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"hexuronate:monoatomic cation symporter activity","synonyms":[{"name":"hexuronate (glucuronate/galacturonate) porter activity","type":"narrow"},{"name":"hexuronate porter activity","type":"related"},{"name":"hexuronate:cation symporter activity","type":"broad"}],"termid":"GO:0015539"}


id: GO:0015773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of raffinose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Raffinose occurs in plants almost as commonly as sucrose and is present in cereal grains, cotton seeds, and many legumes. It is synthesized from sucrose by transfer of a galactopyranoside from myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"raffinose transport","termid":"GO:0015773"}


id: PBO:0064002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 36","termid":"PBO:0064002"}


id: GO:0110121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location at the cytoplasmic side of the mitotic spindle pole body.","definition_xrefs":["PMID:19001497","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex localization to mitotic spindle pole body","termid":"GO:1990735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gamma-tubulin complex localization to cytoplasmic side of mitotic spindle pole body","termid":"GO:0110121"}


id: GO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a nucleotide to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nucleotidylation","synonyms":[{"name":"protein amino acid nucleotidylation","type":"exact"}],"termid":"GO:0018175"}


id: GO:0051688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a plastid is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid localization","termid":"GO:0051644"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of plastid location","synonyms":[{"name":"maintenance of plastid localization","type":"related"}],"termid":"GO:0051688"}


id: PBO:0059294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45","termid":"PBO:0059294"}


id: PBO:0073922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 11","termid":"PBO:0073922"}


id: PR:Q09875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gms2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.12","synonyms":[{"name":"Spom972h-gms2","type":"exact"}],"termid":"PR:Q09875"}


id: GO:0098650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptidyl-proline 4-dioxygenase.","definition_xrefs":["GOC:dos","GOC:kvm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase binding","termid":"GO:0098650"}


id: PBO:0087255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in regulation of ion transport across plasma membrane; carboxyl terminus is essential for glucose-dependent Pma1p activation via phosphorylation of Pma1p-Ser899; enhances spermine uptake; PTK2 has a paralog, PTK1, that arose from the whole genome duplication","termid":"PBO:0087255"}


id: GO:1905216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA binding.","definition_xrefs":["GOC:bf","PMID:25116364","GOC:PARL","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"},{"relation_name":"is_a","term_name":"regulation of RNA binding","termid":"GO:1905214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA binding","synonyms":[{"name":"activation of RNA binding","type":"narrow"},{"name":"up regulation of RNA binding","type":"exact"},{"name":"up-regulation of RNA binding","type":"exact"},{"name":"upregulation of RNA binding","type":"exact"}],"termid":"GO:1905216"}


id: PBO:0063395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 2","termid":"PBO:0063395"}


id: PBO:0050819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 4","termid":"PBO:0050819"}


id: GO:0004081
data:
  {"annotated_genes":["SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112087],"is_not":false,"summary":null,"term":"GO:0004081"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = NTP + NMP. Acts on bis(5'-guanosyl)-, bis(5'-xanthosyl)-, bis(5'-adenosyl)- and bis(5'-uridyl)-tetraphosphate.","definition_xrefs":["EC:3.6.1.17","PMID:4955726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bis(5'-nucleosyl)-tetraphosphatase activity","termid":"GO:0008796"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.6.1.17-RXN","RHEA:22484","Reactome:R-HSA-5696197"],"synonyms":[{"name":"1-P,4-P-bis(5'-nucleosyl)-tetraphosphate nucleotidohydrolase activity","type":"related"},{"name":"Ap(4)A hydrolase activity","type":"broad"},{"name":"Ap(4)Aase activity","type":"broad"},{"name":"Ap4A hydrolase activity","type":"broad"},{"name":"Ap4Aase activity","type":"broad"},{"name":"P1,P4-bis(5'-nucleosyl)-tetraphosphate nucleotidohydrolase activity","type":"related"},{"name":"bis(5'-adenosyl)-tetraphosphatase activity","type":"narrow"},{"name":"bis(5'-guanosyl)-tetraphosphatase activity","type":"narrow"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate asymmetrical hydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase","type":"narrow"},{"name":"diadenosine P1,P4-tetraphosphatase activity","type":"related"},{"name":"diadenosinetetraphosphatase (asymmetrical) activity","type":"narrow"},{"name":"diguanosinetetraphosphatase (asymmetrical) activity","type":"narrow"},{"name":"dinucleoside tetraphosphatase activity","type":"related"},{"name":"dinucleosidetetraphosphatase (asymmetrical) activity","type":"related"}],"termid":"GO:0004081","terms_by_termid":{"GO:0004081":null}}


id: PBO:0074453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC related modular calcium binding 1","termid":"PBO:0074453"}


id: PBO:0072353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 39","termid":"PBO:0072353"}


id: GO:0033233
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein sumoylation","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"regulation of sumoylation","type":"exact"}],"termid":"GO:0033233","terms_by_termid":{"GO:0033234":null}}


id: GO:0017136
data:
  {"annotated_genes":["SJAG_04186","SJAG_01075","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[99453,109489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[76095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from a histone.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"},{"relation_name":"is_a","term_name":"NAD-dependent protein deacetylase activity","termid":"GO:0034979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016810","GO:0016787","GO:0019213","GO:0033558"],"is_obsolete":false,"name":"NAD-dependent histone deacetylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SIR2","type":"related"}],"termid":"GO:0017136","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null}}


id: GO:0097239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a methylglyoxal stimulus.","definition_xrefs":["GOC:dgf","PMID:15773992"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal (obsolete GO:0097239)","termid":"GO:0097239"}


id: PATO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000113 radiation sensitivity (obsolete PATO:0000113)","termid":"PATO:0000113"}


id: GO:0034649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a methyl group from monomethylated lysine at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah","PMID:16223729"],"gene_count":0,"genotype_count":0,"name":"obsolete histone demethylase activity (H3-monomethyl-K4 specific) (obsolete GO:0034649)","synonyms":[{"name":"histone demethylase activity (H3-K4-me1 specific)","type":"exact"}],"termid":"GO:0034649"}


id: GO:1990407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcitonin gene-related peptide (CGRP).","definition_xrefs":["PMID:10882736","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcitonin gene-related peptide binding","synonyms":[{"name":"CGRP polypeptide binding","type":"exact"},{"name":"calcitonin-gene-related peptide binding","type":"exact"},{"name":"calcitonin-gene-related polypeptide binding","type":"exact"}],"termid":"GO:1990407"}


id: GO:1900644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chanoclavine-I biosynthetic process (obsolete GO:1900644)","synonyms":[{"name":"down regulation of chanoclavine-I anabolism","type":"exact"},{"name":"down regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"down regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"down regulation of chanoclavine-I formation","type":"exact"},{"name":"down regulation of chanoclavine-I synthesis","type":"exact"},{"name":"down-regulation of chanoclavine-I anabolism","type":"exact"},{"name":"down-regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"down-regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"down-regulation of chanoclavine-I formation","type":"exact"},{"name":"down-regulation of chanoclavine-I synthesis","type":"exact"},{"name":"downregulation of chanoclavine-I anabolism","type":"exact"},{"name":"downregulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"downregulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"downregulation of chanoclavine-I formation","type":"exact"},{"name":"downregulation of chanoclavine-I synthesis","type":"exact"},{"name":"inhibition of chanoclavine-I anabolism","type":"exact"},{"name":"inhibition of chanoclavine-I biosynthesis","type":"exact"},{"name":"inhibition of chanoclavine-I biosynthetic process","type":"narrow"},{"name":"inhibition of chanoclavine-I formation","type":"exact"},{"name":"inhibition of chanoclavine-I synthesis","type":"exact"},{"name":"negative regulation of chanoclavine-I anabolism","type":"exact"},{"name":"negative regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"negative regulation of chanoclavine-I formation","type":"exact"},{"name":"negative regulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900644"}


id: PBO:0063097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator alpha","termid":"PBO:0063097"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: GO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-nonaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:jl","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-nonaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043429)","synonyms":[{"name":"2-nonaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043429"}


id: PBO:0079705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 1","termid":"PBO:0079705"}


id: PBO:0035890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_onset_of_actomyosin_contractile_ring_contraction","termid":"PBO:0035890"}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADP) activity","secondary_identifiers":["EC:1.8.1.10","MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"CoA-glutathione reductase (NADPH) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: PBO:0054261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1646","termid":"PBO:0054261"}


id: PBO:0000625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain protein","termid":"PBO:0000625"}


id: GO:0016508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a medium-chain (3S)-3-hydroxyacyl-CoA = a medium-chain (2E)-enoyl-CoA + H2O. A long-chain acyl-CoA is an acyl-CoA thioester where the acyl chain contains 13 to 22 carbon atoms.","definition_xrefs":["RHEA:71647"],"gene_count":0,"genotype_count":0,"name":"obsolete long-chain-enoyl-CoA hydratase activity (obsolete GO:0016508)","synonyms":[{"name":"long-chain enoyl coenzyme A hydratase activity","type":"related"},{"name":"long-chain-(3S)-3-hydroxyacyl-CoA hydro-lyase activity","type":"related"}],"termid":"GO:0016508"}


id: GO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5,6,7,8-tetrahydrofolate + trimethylsulfonium = (6S)-5-methyl-5,6,7,8-tetrahydrofolate + dimethyl sulfide + H+.","definition_xrefs":["RHEA:13693","EC:2.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trimethylsulfonium-tetrahydrofolate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02573","MetaCyc:2.1.1.19-RXN"],"synonyms":[{"name":"trimethylsulfonium-tetrahydrofolate methyltransferase activity","type":"related"},{"name":"trimethylsulfonium:tetrahydrofolate N-methyltransferase activity","type":"related"},{"name":"trimethylsulphonium-tetrahydrofolate N-methyltransferase activity","type":"exact"}],"termid":"GO:0047147"}


id: GO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopolysaccharide.","definition_xrefs":["PMID:11079463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"lipopolysaccharide binding","synonyms":[{"name":"LPS binding","type":"exact"},{"name":"endotoxin binding","type":"broad"}],"termid":"GO:0001530"}


id: GO:1905609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:14970114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell-matrix adhesion","synonyms":[{"name":"activation of smooth muscle cell-matrix adhesion","type":"narrow"},{"name":"up regulation of smooth muscle cell-matrix adhesion","type":"exact"},{"name":"up-regulation of smooth muscle cell-matrix adhesion","type":"exact"},{"name":"upregulation of smooth muscle cell-matrix adhesion","type":"exact"}],"termid":"GO:1905609"}


id: PR:Q10272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein crb3/ipi3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.08c","secondary_identifiers":["UniProtKB:Q10272"],"synonyms":[{"name":"Spom972h-WDR18","type":"exact"}],"termid":"PR:Q10272"}


id: SO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylpseudouridine","secondary_identifiers":["RNAMOD:055"],"synonyms":[{"name":"1-methylpseudouridine","type":"exact"},{"name":"m1Y","type":"exact"},{"name":"one methylpseudouridine","type":"exact"}],"termid":"SO:0001347"}


id: PBO:0062689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 10 pseudogene","termid":"PBO:0062689"}


id: GO:0075034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which nuclear division occurs within a symbiont spore that contributes to appressorium formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear division involved in appressorium formation (obsolete GO:0075034)","synonyms":[{"name":"nuclear division during appressorium formation on or near host","type":"related"},{"name":"nuclear division involved in appressorium formation on or near host","type":"related"}],"termid":"GO:0075034"}


id: PBO:0043583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XV alpha 1 chain","termid":"PBO:0043583"}


id: PBO:0090386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (cytosine-5-)-methyltransferase Rcm1","termid":"PBO:0090386"}


id: PBO:0081121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAT antisense RNA 1","termid":"PBO:0081121"}


id: PBO:0055733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7 downstream neighbor","termid":"PBO:0055733"}


id: PBO:0070172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 86 pseudogene","termid":"PBO:0070172"}


id: GO:0048850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hypophysis are generated and organized. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"pituitary gland development","termid":"GO:0021983"},{"relation_name":"part_of","term_name":"diencephalon morphogenesis","termid":"GO:0048852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypophysis morphogenesis","synonyms":[{"name":"pituitary gland morphogenesis","type":"exact"}],"termid":"GO:0048850"}


id: GO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a cilium.","definition_xrefs":["GOC:cilia","GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ciliary membrane","secondary_identifiers":["GO:0020017"],"synonyms":[{"name":"cilial membrane","type":"exact"},{"name":"cilium membrane","type":"exact"},{"name":"flagellar membrane","type":"narrow"},{"name":"flagellum membrane","type":"narrow"}],"termid":"GO:0060170"}


id: GO:0003989
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76113],"is_not":false,"summary":null,"term":"GO:0003989"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.","definition_xrefs":["EC:6.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA carboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACETYL-COA-CARBOXYLTRANSFER-RXN","Reactome:R-HSA-75851","Reactome:R-HSA-200555","RHEA:11308","Reactome:R-HSA-8876889"],"synonyms":[{"name":"acetyl coenzyme A carboxylase activity","type":"related"},{"name":"acetyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"}],"termid":"GO:0003989","terms_by_termid":{"GO:0003989":null}}


id: GO:0097110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a scaffold protein. Scaffold proteins are crucial regulators of many key signaling pathways. Although not strictly defined in function, they are known to interact and/or bind with multiple members of a signaling pathway, tethering them into complexes.","definition_xrefs":["GOC:sjp","GOC:BHF","Wikipedia:Scaffold_protein","PMID:10433269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"scaffold protein binding","termid":"GO:0097110"}


id: GO:0180018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the cytoplasm and resulting in the breakdown of an RNA molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA truncated degradation intermediate.","definition_xrefs":["PMID:20368444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent RNA catabolic process","termid":"GO:0043633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"cytoplasmic polyadenylation-dependent RNA catabolic process","termid":"GO:0180018"}


id: PBO:0042906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 3","termid":"PBO:0042906"}


id: PBO:0083855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Expressed copy (at MATa) of a1; homeobox-domain protein that, along with alpha2, represses transcription of haploid-specific genes in diploid cells; MATa1 pre-mRNA splicing requires Bud13p and Ist3p; a1 sequence is not present in SGD because the sequenced S288C strain is MATalpha, not MATa","termid":"PBO:0083855"}


id: PBO:0090540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal mitochondrial NADH dehydrogenase (ubiquinone) Ndi1","termid":"PBO:0090540"}


id: MOD:00830
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to an N-methyl-L-proline.","definition_xrefs":["RESID:AA0419","PubMed:3127388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated proline","termid":"MOD:01417"},{"relation_name":"is_a","term_name":"N-methylated proline","termid":"MOD:01462"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-proline","synonyms":[{"name":"(S)-1-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES N-methylproline","type":"exact"},{"name":"N-methyl-L-proline","type":"exact"},{"name":"N-methylated L-proline","type":"exact"},{"name":"NMePro","type":"exact"},{"name":"hygric acid","type":"exact"}],"termid":"MOD:00830"}


id: PBO:0050780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1D pseudogene 1","termid":"PBO:0050780"}


id: PBO:0028946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate-cysteine_ligase_activity","termid":"PBO:0028946"}


id: GO:0043262
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109042],"is_not":false,"summary":null,"term":"GO:0043262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + H2O = AMP + phosphate + H+.","definition_xrefs":["RHEA:61436","PMID:1470606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ADP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10862"],"synonyms":[{"name":"ADP diphosphatase activity","type":"broad"},{"name":"ADPase","type":"broad"},{"name":"ADPase activity","type":"related"},{"name":"ATP diphosphohydrolase activity","type":"related"},{"name":"ATP-diphosphatase activity","type":"related"},{"name":"adenosine diphosphatase activity","type":"related"},{"name":"adenosine-diphosphatase activity","type":"exact"}],"termid":"GO:0043262","terms_by_termid":{"GO:0043262":null}}


id: GO:0098884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the internalization of a neurotransmitter receptor from the postsynaptic membrane endocytic zone into an endocytic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"neurotransmitter receptor internalization","termid":"GO:0099590"},{"relation_name":"is_a","term_name":"postsynaptic endocytosis","termid":"GO:0140239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor internalization","synonyms":[{"name":"postsynaptic neurotransmitter receptor endocytosis","type":"exact"}],"termid":"GO:0098884"}


id: PBO:0048274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 10","termid":"PBO:0048274"}


id: GO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neuroblast splits off of a neurectodermal sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neuroblast delamination","termid":"GO:0060234"}


id: PBO:0017768
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cruciform Cutting Endonuclease","termid":"PBO:0017768"}


id: MOD:00723
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to either N2-acetyl-L-lysine, or N6-acetyl-L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated residue","termid":"MOD:00408"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetylated L-lysine","synonyms":[{"name":"NAcLys","type":"exact"}],"termid":"MOD:00723"}


id: PBO:0030943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_depolymerization","termid":"PBO:0030943"}


id: PBO:0083830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanol acetyltransferase; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0083830"}


id: GO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex of two polypeptides which catalyzes the transfer of methyl group from methylthiol to coenzyme M during methanogenesis.","definition_xrefs":["PMID:11073950","PMID:9371433","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methylthiol:coenzyme M methyltransferase complex","synonyms":[{"name":"methylthiol coenzyme M methyl transferase complex","type":"exact"},{"name":"methylthiol:CoM methyltransferase complex","type":"exact"},{"name":"methylthiol:coenzyme M methyl transferase complex","type":"exact"}],"termid":"GO:0044680"}


id: FYPO:0006107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells mate and undergo meiotic nuclear division and sporulation in the presence of nutrients, notably nitrogen and glucose. Normally, fission yeast mate, undergo meiosis, and sporulate only under conditions of nitrogen and carbon starvation.","definition_xrefs":["PomBase:mah","PMID:27613427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"mating, meiosis, and sporulation without starvation","synonyms":[{"name":"conjugation, meiosis, and sporulation without starvation","type":"exact"},{"name":"deregulated sporulation","type":"related"},{"name":"mating, meiotic nuclear division, and sporulation without starvation","type":"exact"},{"name":"meiotic cell cycle in presence of nutrients","type":"exact"},{"name":"meiotic cell cycle without starvation","type":"exact"},{"name":"sporulation in presence of nutrients","type":"related"}],"termid":"FYPO:0006107"}


id: PBO:0054184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1559","termid":"PBO:0054184"}


id: PBO:0041924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBS mRNA stabilizing lncRNA","termid":"PBO:0041924"}


id: PBO:0055633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3072","termid":"PBO:0055633"}


id: FYPO:0000123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"large vacuoles","termid":"FYPO:0007821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"large vacuoles during vegetative growth","synonyms":[{"name":"enlarged vacuoles during vegetative growth","type":"exact"},{"name":"large vacuoles during mitotic cell cycle","type":"related"},{"name":"vacuole organization defects, large vacuoles","type":"exact"}],"termid":"FYPO:0000123"}


id: GO:0015046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced rubredoxin + NADP+ = oxidized rubredoxin + NADPH + H+.","definition_xrefs":["RHEA:13949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubredoxin-NAD(P)+ reductase activity","termid":"GO:0015045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"rubredoxin-NADP+ reductase activity","secondary_identifiers":["EC:1.18.1.4"],"termid":"GO:0015046"}


id: MOD:01933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links four L-lysine residues to form desmosine.","definition_xrefs":["ChEBI:37629","PubMed:14109938","PubMed:5839176","RESID:AA0587","PubMed:14109939","PubMed:13941623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmosine","synonyms":[{"name":"4-[(4S)-4-amino-4-carboxybutyl]-1-[(5S)-5-amino-5-carboxypentyl]-3,5-bis[(3S)-3-amino-3-carboxypropyl]pyridinium","type":"exact"},{"name":"6-[4-(4-amino-4-carboxybutyl)-3,5-bis(3-amino-3-carboxypropyl)pyridinio]norleucine","type":"exact"},{"name":"desmosine","type":"exact"}],"termid":"MOD:01933"}


id: PBO:0060490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 1","termid":"PBO:0060490"}


id: PBO:0087781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087781"}


id: PBO:0031598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_metaphase","termid":"PBO:0031598"}


id: PBO:0081560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 484","termid":"PBO:0081560"}


id: SO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence [5'-TCG(G/C)(A/T)xxTTxAA], bound by the transcription factor Pho7.","definition_xrefs":["PMID:28811350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho7_binding_site","synonyms":[{"name":"Pho7 binding site","type":"exact"}],"termid":"SO:0002216"}


id: PBO:0057181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 335","termid":"PBO:0057181"}


id: PBO:0085606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in control of DNA replication; binds Rap1p C-terminus, telomeres, centromeres, replication origins; contributes to resection of DNA double strand breaks (DSBs); acts synergistically with Rif2p to help control telomere length and establish telomeric silencing; in addition to controlling DNA replication initiation, plays ongoing role after initiation and controls events at blocked replication forks","termid":"PBO:0085606"}


id: PBO:0025442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocystinuria","termid":"PBO:0025442"}


id: PBO:0058849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8078","termid":"PBO:0058849"}


id: GO:0018567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: styrene + O2 + NADH + H+ = NAD+ + styrene cis-glycol.","definition_xrefs":["UM-BBD_reactionID:r0256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"styrene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018567"}


id: PBO:0078954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 5-1","termid":"PBO:0078954"}


id: GO:0006064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucuronate, any salt or ester of glucuronic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucuronate catabolic process","synonyms":[{"name":"glucuronate breakdown","type":"exact"},{"name":"glucuronate catabolism","type":"exact"},{"name":"glucuronate degradation","type":"exact"}],"termid":"GO:0006064"}


id: GO:0033234
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57469],"is_not":false,"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein sumoylation","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"negative regulation of sumoylation","type":"exact"}],"termid":"GO:0033234","terms_by_termid":{"GO:0033234":null}}


id: PR:O74308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gsf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C15D4.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.02","synonyms":[{"name":"Spom972h-gsf1","type":"exact"}],"termid":"PR:O74308"}


id: PBO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP16 nucleolar protein","termid":"PBO:0061236"}


id: FYPO:0003908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of genes that are expressed in response to stress measured in a cell is greater than normal. All stress-responsive genes, or a specific subset of such genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased stress response gene antisense RNA level","synonyms":[{"name":"increased antisense RNA level at stress response genes","type":"related"},{"name":"increased level of stress response gene antisense transcripts","type":"exact"},{"name":"increased stress response gene antisense RNA accumulation","type":"related"},{"name":"increased stress response gene antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased stress response gene antisense RNA level during vegetative growth","type":"exact"},{"name":"increased stress response gene antisense transcript level","type":"exact"}],"termid":"FYPO:0003908"}


id: PBO:0017015
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Orc4 binding footprint at replication origins is extended in G1 in the presence of Cdc1 and the MCM complex","termid":"PBO:0017015"}


id: FYPO:0003121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:23117617","PMID:22582262","PMID:24173580","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal rate of homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal rate of homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal rate of synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003121"}


id: GO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response.","definition_xrefs":["GOC:add","PMID:15771571","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"immune response-regulating cell surface receptor signaling pathway","synonyms":[{"name":"immune response-regulating cell surface receptor signalling pathway","type":"exact"}],"termid":"GO:0002768"}


id: PBO:0089572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3e","termid":"PBO:0089572"}


id: GO:0019822
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P4 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"P4 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019822"}


id: PBO:0059951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 37","termid":"PBO:0059951"}


id: GO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin production","termid":"GO:0002637"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"regulation of isotype switching","synonyms":[{"name":"regulation of class switch recombination","type":"exact"},{"name":"regulation of class switching","type":"exact"},{"name":"regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045191"}


id: PBO:0051850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRX4 antisense RNA 1","termid":"PBO:0051850"}


id: GO:0047233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetylgalactosamine = N-acetyl-beta-D-galactosaminyl-1,4-(N-acetyl-alpha-neuraminyl-2,3)-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP.","definition_xrefs":["EC:2.4.1.165","MetaCyc:2.4.1.165-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"N-acetylneuraminylgalactosylglucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:13569"],"synonyms":[{"name":"UDP-N-acetyl-D-galactosamine:N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-acetylneuraminyl(alpha2->3)galactosyl(beta1->4)glucosyl beta1->4-acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047233"}


id: PBO:0083457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HSF1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0083457"}


id: GO:0045922
data:
  {"annotated_genes":["SJAG_03130"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of fatty acid metabolic process","type":"exact"},{"name":"down-regulation of fatty acid metabolic process","type":"exact"},{"name":"downregulation of fatty acid metabolic process","type":"exact"},{"name":"inhibition of fatty acid metabolic process","type":"narrow"},{"name":"negative regulation of fatty acid metabolism","type":"exact"}],"termid":"GO:0045922","terms_by_termid":{"GO:0045717":null}}


