# terms

id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: GO:0009747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by hexose and dependent on the detection of hexokinase.","definition_xrefs":["GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose mediated signaling","termid":"GO:0009757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hexokinase-dependent signaling","synonyms":[{"name":"hexokinase-dependent signalling","type":"exact"}],"termid":"GO:0009747"}


id: PBO:0045940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A5","termid":"PBO:0045940"}


id: GO:0120152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an outer dynein arm in the presence of calcium.","definition_xrefs":["GOC:krc","PMID:18620543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-dependent protein binding","termid":"GO:0048306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent outer dynein arm binding","termid":"GO:0120152"}


id: PBO:0052711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 3","termid":"PBO:0052711"}


id: PBO:0063317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase 1","termid":"PBO:0063317"}


id: PBO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 1","termid":"PBO:0042130"}


id: PBO:0057684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1273c","termid":"PBO:0057684"}


id: PBO:0068756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 1","termid":"PBO:0068756"}


id: GO:0031811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled (metabotropic) nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled nucleotide receptor binding","synonyms":[{"name":"G-protein coupled nucleotide receptor binding","type":"exact"},{"name":"P2Y receptor binding","type":"exact"},{"name":"metabotropic nucleotide receptor binding","type":"exact"},{"name":"metabotropic nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031811"}


id: PBO:0083229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps YBR223C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083229"}


id: GO:0043353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires specialized features of an erythrocyte without a nucleus. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleate erythrocyte differentiation","synonyms":[{"name":"enucleate RBC differentiation","type":"exact"},{"name":"enucleate red blood cell differentiation","type":"exact"}],"termid":"GO:0043353"}


id: PBO:0039043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 antisense RNA 1","termid":"PBO:0039043"}


id: GO:0141112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of bringing together chromosomes fragments resulting from DNA damage. Broken chromosome tethering during mitosis ensures clustered segregation of the fragments to a single daughter cell nucleus, facilitating re-ligation with limited chromosome scattering and loss and enhancing genome integrity.","definition_xrefs":["PMID:37316668","PMID:37165191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"part_of","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"broken chromosome clustering","termid":"GO:0141112"}


id: PBO:0083114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase IV; undergoes pair-wise interactions with Dnl4p-Lif1p and Rad27p to mediate repair of DNA double-strand breaks by non-homologous end joining (NHEJ); homologous to mammalian DNA polymerase beta","termid":"PBO:0083114"}


id: PBO:0030642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_raffinose_carbon_source","termid":"PBO:0030642"}


id: GO:1990809
data:
  {"annotated_genes":["SJAG_05289","SJAG_03795","SJAG_03812","SJAG_01848","SJAG_01460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98704,103734,103811,110022,113534],"is_not":false,"summary":null,"term":"GO:1990809"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) tubular network membrane.","definition_xrefs":["PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"},{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01460":null,"SJAG_01848":null,"SJAG_03795":null,"SJAG_03812":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990809","terms_by_termid":{"GO:1990809":null}}


id: PBO:0085142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that forms a complex with Csm1p; and then Mam1p at kinetochores during meiosis I to mediate accurate homolog segregation; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation","termid":"PBO:0085142"}


id: PBO:0080423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 7","termid":"PBO:0080423"}


id: PBO:0077801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 4 member A","termid":"PBO:0077801"}


id: GO:0015552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of propionate from one side of a membrane to the other. Propionate (or propanoate) is the organic acid CH3-CH2-COOH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid transmembrane transporter activity","termid":"GO:0015636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"propionate transmembrane transporter activity","termid":"GO:0015552"}


id: PBO:0050619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 11","termid":"PBO:0050619"}


id: GO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A punctate, filamentous structure composed of Bcl10 that appears in the cytoplasm of T-cells shortly after T-cell receptor stimulation. Polkadots stands for Punctate Oligomeric Killing and Activating DOmains Transducing Signals.","definition_xrefs":["PMID:16495340","PMID:14724296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"polkadots","termid":"GO:0002096"}


id: GO:0035251
data:
  {"annotated_genes":["SJAG_01288","SJAG_02222","SJAG_00182","SJAG_00876","SJAG_01427","SJAG_00394","SJAG_03587","SJAG_04571","SJAG_01862","SJAG_01531","SJAG_05285","SJAG_00129","SJAG_01646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78296,108250,74888,73835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[77555,77810,73288,78397,73751,74977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[110848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[106200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[77805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to an acceptor molecule.","definition_xrefs":["PMID:19858195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"UDP-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1912353"],"termid":"GO:0035251","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0140752":null}}


id: PBO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB intronic transcript 1","termid":"PBO:0051950"}


id: GO:1901174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytoene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"phytoene metabolic process","termid":"GO:1901172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytoene biosynthetic process","synonyms":[{"name":"phytoene synthesis","type":"exact"},{"name":"phytoene anabolism","type":"exact"},{"name":"phytoene biosynthesis","type":"exact"},{"name":"phytoene formation","type":"exact"}],"termid":"GO:1901174"}


id: PBO:0052642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 10","termid":"PBO:0052642"}


id: PBO:0063944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1","termid":"PBO:0063944"}


id: GO:0140245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates translation occurring at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation at synapse","termid":"GO:0140243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation at postsynapse","termid":"GO:0140245"}


id: PBO:0050605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 1","termid":"PBO:0050605"}


id: GO:0046199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"cresol catabolic process","synonyms":[{"name":"cresol breakdown","type":"exact"},{"name":"cresol catabolism","type":"exact"},{"name":"cresol degradation","type":"exact"}],"termid":"GO:0046199"}


id: PBO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Sec73 (predicted)","termid":"PBO:0001574"}


id: GO:0031866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP3 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"EP3 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP3 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP3 receptor binding","type":"exact"}],"termid":"GO:0031866"}


id: PR:Q9USR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02582","PANTHER:PTHR10438:SF19","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.08c","secondary_identifiers":["UniProtKB:Q9USR1"],"synonyms":[{"name":"Spom972h-TXNL1","type":"exact"},{"name":"thioredoxin homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR1"}


id: PBO:0039873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 30","termid":"PBO:0039873"}


id: PR:Q8TFH4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.10c gene.","definition_xrefs":["UniProtKB:Q8TFH4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA methyltransferase PB17E12.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.10c","synonyms":[{"name":"Spom972h-SPAPB17E12.10c","type":"exact"},{"name":"rRNA (uridine-2'-O-)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH4"}


id: GO:0140696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + a quinone = 2-oxoglutarate + a quinol.","definition_xrefs":["PMID:30498244","RHEA:58664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-2-hydroxyglutarate dehydrogenase activity","secondary_identifiers":["EC:1.1.5.13"],"synonyms":[{"name":"L-2-hydroxyglutarate dehydrogenase activity","type":"exact"}],"termid":"GO:0140696"}


id: PBO:0031248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0031248"}


id: PBO:0087786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfiredoxin; contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups in the peroxiredoxin Tsa1p, which is formed upon exposure to oxidants; conserved in higher eukaryotes; protein abundance increases in response to DNA replication stress","termid":"PBO:0087786"}


id: PBO:0057519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 637","termid":"PBO:0057519"}


id: FYPO:0003201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of primary cell septum biogenesis is decreased.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of primary cell septum biogenesis","synonyms":[{"name":"decreased rate of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"decreased rate of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"decreased rate of primary septum biogenesis","type":"exact"},{"name":"increased duration of primary cell septum biogenesis","type":"related"},{"name":"reduced rate of primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0003201"}


id: PBO:0004651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Sar1","termid":"PBO:0004651"}


id: GO:0042660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or enables a cell to adopt a specific fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"positively_regulates","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate specification","synonyms":[{"name":"activation of cell fate specification","type":"narrow"},{"name":"stimulation of cell fate specification","type":"narrow"},{"name":"up regulation of cell fate specification","type":"exact"},{"name":"up-regulation of cell fate specification","type":"exact"},{"name":"upregulation of cell fate specification","type":"exact"}],"termid":"GO:0042660"}


id: PBO:0045604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 15 (pseudogene)","termid":"PBO:0045604"}


id: PBO:0081163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger translocation associated","termid":"PBO:0081163"}


id: PBO:0055567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3003","termid":"PBO:0055567"}


id: GO:0016822
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018773"},{"annotations":[101976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-carbon bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-carbon bonds","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.7.-.-"],"termid":"GO:0016822","terms_by_termid":{"GO:0018773":null,"GO:0047621":null}}


id: GO:0015726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which L-idonate is transported across a lipid bilayer, from one side of a membrane to the other. L-idonate is an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-idonate transmembrane transport","synonyms":[{"name":"L-idonate transport","type":"related"}],"termid":"GO:0015726"}


id: GO:0004475
data:
  {"annotated_genes":["SJAG_00890","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74426,98341],"is_not":false,"summary":null,"term":"GO:0004475"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-mannose 1-phosphate + GTP = diphosphate + GDP-alpha-D-mannose.","definition_xrefs":["RHEA:15229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"mannose-1-phosphate guanylyltransferase (GTP) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.7.13-RXN","Reactome:R-HSA-446221","KEGG_REACTION:R00885","EC:2.7.7.13"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase activity","type":"related"},{"name":"GTP-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:alpha-D-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:mannose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"PIM-GMP (phosphomannose isomerase-guanosine 5'-diphospho-D-mannose pyrophosphorylase)","type":"related"},{"name":"guanosine 5'-diphospho-D-mannose pyrophosphorylase activity","type":"related"},{"name":"guanosine diphosphomannose pyrophosphorylase activity","type":"related"},{"name":"guanosine triphosphate-mannose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"mannose 1-phosphate guanylyltransferase (guanosine triphosphate)","type":"related"},{"name":"mannose-1-phosphate guanylyltransferase activity","type":"broad"}],"termid":"GO:0004475","terms_by_termid":{"GO:0004475":null}}


id: GO:0031460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glycine betaine, N-trimethylglycine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glycine betaine transport","synonyms":[{"name":"N-trimethylglycine transport","type":"exact"}],"termid":"GO:0031460"}


id: MOD:01360
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to the 4-sulfophenyl isothiocyanate adduct, N6-[(4-sulfophenyl)carbamothioyl]lysine.","definition_xrefs":["PubMed:15549660","Unimod:261#K","PubMed:14689565","PubMed:14745769","PubMed:16526082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-sulfophenyl isothiocyanate N6-derivatized lysine","synonyms":[{"name":"4-sulfophenyl isothiocyanate","type":"related"},{"name":"N6-[(4-sulfophenyl)carbamothioyl]lysine","type":"exact"},{"name":"SPITC","type":"related"}],"termid":"MOD:01360"}


id: GO:0099643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any signal release from a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"signal release from synapse","termid":"GO:0099643"}


id: GO:0009582
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abiotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of abiotic stimulus","type":"related"}],"termid":"GO:0009582","terms_by_termid":{"GO:0050982":null}}


id: SO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The C-terminal residues of a polypeptide which are exchanged for a GPI-anchor.","definition_xrefs":["EBI:rh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cleaved_for_gpi_anchor_region","synonyms":[{"name":"cleaved for gpi anchor region","type":"exact"}],"termid":"SO:0001408"}


id: PBO:0079572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 4","termid":"PBO:0079572"}


id: GO:0050849
data:
  {"annotated_genes":["SJAG_03799","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111160,96282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-mediated signaling.","definition_xrefs":["GOC:ai","PMID:11696592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03799":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of calcium-mediated signaling","type":"exact"},{"name":"down-regulation of calcium-mediated signaling","type":"exact"},{"name":"downregulation of calcium-mediated signaling","type":"exact"},{"name":"inhibition of calcium-mediated signaling","type":"narrow"},{"name":"negative regulation of calcium-mediated signalling","type":"exact"}],"termid":"GO:0050849","terms_by_termid":{"GO:0106057":null}}


id: PBO:0042599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 15","termid":"PBO:0042599"}


id: PBO:0046485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 8, CSA ubiquitin ligase complex subunit","termid":"PBO:0046485"}


id: GO:0106030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of neuronal projections into a bundle of rods, known as a fascicle.","definition_xrefs":["PMID:12761826","GOC:bc.","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection fasciculation","termid":"GO:0106030"}


id: PBO:0042302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD9 molecule","termid":"PBO:0042302"}


id: PBO:0076277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 1","termid":"PBO:0076277"}


id: GO:0015168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerol from one side of a membrane to the other. Glycerol is 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glycerol transmembrane transporter activity","termid":"GO:0015168"}


id: PBO:0068493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 77, pseudogene","termid":"PBO:0068493"}


id: PBO:0034495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_assimilation_gene_mRNA_during_vegetative_growth","termid":"PBO:0034495"}


id: PBO:0027533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_decreased_numbers_during_vegetative_growth","termid":"PBO:0027533"}


id: PBO:0063666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins phospholipase 3","termid":"PBO:0063666"}


id: MOD:00768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Oxidation of methionine to methionine sulfone with neutral loss of CH3SO2H.","definition_xrefs":["PubMed:18688235","PubMed:9004526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine oxidation with neutral loss of 80 Da","termid":"MOD:00768"}


id: GO:1903125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A peptidyl-threonine phosphorylation that results in negative regulation of thioredoxin peroxidase activity.","definition_xrefs":["GO_REF:0000063","GOC:PARL","GOC:bf","GOC:TermGenie","PMID:21850687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation","synonyms":[{"name":"negative regulation of TPx activity by peptidyl-threonine phosphorylation","type":"exact"},{"name":"negative regulation of TrxPx activity by peptidyl-threonine phosphorylation","type":"exact"},{"name":"negative regulation of thiol peroxidase activity by peptidyl-threonine phosphorylation","type":"exact"}],"termid":"GO:1903125"}


id: PBO:0080716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN helicase interacting protein 1","termid":"PBO:0080716"}


id: PBO:0004149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein","termid":"PBO:0004149"}


id: GO:1905589
data:
  {"annotated_genes":["SJAG_03591","SJAG_02605","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87187,88741,94202,105667],"is_not":false,"summary":null,"term":"GO:1905589"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:14718525","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"positively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-arginine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901042","GO:1902828"],"synonyms":[{"name":"activation of L-arginine import","type":"narrow"},{"name":"activation of L-arginine import across plasma membrane","type":"narrow"},{"name":"activation of L-arginine import into cell","type":"narrow"},{"name":"activation of L-arginine uptake","type":"exact"},{"name":"positive regulation of L-arginine import","type":"broad"},{"name":"positive regulation of L-arginine import into cell","type":"exact"},{"name":"positive regulation of L-arginine uptake","type":"exact"},{"name":"up regulation of L-arginine import","type":"exact"},{"name":"up regulation of L-arginine uptake","type":"exact"},{"name":"up-regulation of L-arginine import","type":"exact"},{"name":"up-regulation of L-arginine import into cell","type":"exact"},{"name":"up-regulation of L-arginine uptake","type":"exact"},{"name":"upregulation of L-arginine import","type":"exact"},{"name":"upregulation of L-arginine import into cell","type":"exact"},{"name":"upregulation of L-arginine uptake","type":"exact"}],"termid":"GO:1905589","terms_by_termid":{"GO:1905589":null}}


id: GO:0071108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K48-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K48-linked deubiquitination","termid":"GO:0071108"}


id: GO:0102672
data:
  {"annotated_genes":["SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85338],"is_not":false,"summary":null,"term":"GO:0102672"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + a 2,3,4-saturated fatty acid = a 2(R)-hydroperoxy fatty acid.","definition_xrefs":["EC:1.13.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fatty acid alpha-oxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-4121"],"termid":"GO:0102672","terms_by_termid":{"GO:0102672":null}}


id: FYPO:0006580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amiodarone than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to amiodarone","synonyms":[{"name":"resistance to amiodarone during mitotic cell cycle","type":"related"},{"name":"resistance to amiodarone during vegetative growth","type":"exact"},{"name":"resistant to amiodarone","type":"exact"}],"termid":"FYPO:0006580"}


id: GO:0072348
data:
  {"annotated_genes":["SJAG_04295","SJAG_03577","SJAG_01589","SJAG_02779","SJAG_04325","SJAG_00671","SJAG_01344","SJAG_01941","SJAG_02962","SJAG_01890","SJAG_00835","SJAG_00991","SJAG_04673","SJAG_03334","SJAG_03497","SJAG_02463","SJAG_03652","SJAG_01660","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[113938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[90904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[108222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[91445,113157,92411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[96642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[96643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[83828,97860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[83970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[98892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[88742],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[95635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[111639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"},{"annotations":[95963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[85646,85647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01344":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sulfur compound transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulfur-containing compound transport","type":"exact"}],"termid":"GO:0072348","terms_by_termid":{"GO:0035348":null,"GO:0071934":null,"GO:0071996":null,"GO:0098709":null,"GO:0140125":null,"GO:0160007":null,"GO:1902358":null,"GO:1902434":null,"GO:1903712":null,"GO:1905135":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990553":null,"GO:1990554":null,"GO:1990557":null}}


id: GO:0098674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the neuronal dense core vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"},{"relation_name":"part_of","term_name":"neuronal dense core vesicle membrane","termid":"GO:0099012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"extrinsic component of neuronal dense core vesicle membrane","termid":"GO:0098674"}


id: PBO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 24","termid":"PBO:0071886"}


id: PBO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Sme1","termid":"PBO:0003764"}


id: GO:0007406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast proliferation","synonyms":[{"name":"down regulation of neuroblast proliferation","type":"exact"},{"name":"down-regulation of neuroblast proliferation","type":"exact"},{"name":"downregulation of neuroblast proliferation","type":"exact"},{"name":"inhibition of neuroblast proliferation","type":"narrow"},{"name":"suppression of neuroblast proliferation","type":"exact"}],"termid":"GO:0007406"}


id: GO:1904284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antigen processing and presentation of endogenous peptide antigen via MHC class I.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:rl","PMID:24643698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002591"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:1904282"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","synonyms":[{"name":"activation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"narrow"},{"name":"activation of endogenous peptide antigen processing and presentation via MHC class I","type":"narrow"},{"name":"positive regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"up regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"up regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"up-regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"up-regulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"upregulation of antigen processing and presentation of endogenous peptide antigen via MHC class I","type":"exact"},{"name":"upregulation of endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:1904284"}


id: PBO:0059548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Pro (CCN)","termid":"PBO:0059548"}


id: PBO:0038821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 24, pseudogene","termid":"PBO:0038821"}


id: PBO:0028944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_synthase_activity","termid":"PBO:0028944"}


id: PBO:0046092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 3","termid":"PBO:0046092"}


id: GO:2000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cyclodextrin metabolic process","termid":"GO:2000955"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin catabolic process","termid":"GO:2000957"},{"relation_name":"negatively_regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclodextrin catabolic process","synonyms":[{"name":"negative regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000958"}


id: PBO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 4","termid":"PBO:0060707"}


id: PR:O13768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TFIIH basal transcription factor complex helicase XPB subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00720","PANTHER:PTHR11274:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair helicase ercc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.06","secondary_identifiers":["UniProtKB:O13768"],"synonyms":[{"name":"Spom972h-ERCC3","type":"exact"}],"termid":"PR:O13768"}


id: PBO:0089713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Dbl2","termid":"PBO:0089713"}


id: GO:0007208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by serotonin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dph","GOC:signaling","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor signaling pathway","termid":"GO:0098664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating serotonin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by serotonin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by serotonin receptor signalling pathway","type":"related"},{"name":"serotonin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007208"}


id: PBO:0038979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose/CDP-alcohol diphosphatase, manganese dependent","termid":"PBO:0038979"}


id: GO:0031364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from the side chain of an N-terminal asparagine or glutamine residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from side chain","termid":"GO:0031364"}


id: PBO:0042069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 2","termid":"PBO:0042069"}


id: GO:0005623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell (obsolete GO:0005623)","secondary_identifiers":["Wikipedia:Cell_(biology)","NIF_Subcellular:sao1813327414"],"termid":"GO:0005623"}


id: PBO:0029510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_septated_cells_(obsolete_FYPO:0002204)","termid":"PBO:0029510"}


id: PBO:0052323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1328 pseudogene 1","termid":"PBO:0052323"}


id: GO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs.","definition_xrefs":["PMID:12019563","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor inner segment","termid":"GO:0001917"}


id: PBO:0029274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_MCB_promoters_during_cellular_response_to_hydroxyurea","termid":"PBO:0029274"}


id: PBO:0075958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor family member 2","termid":"PBO:0075958"}


id: PBO:0052056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1","termid":"PBO:0052056"}


id: PBO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRBOX5 pseudogene 1","termid":"PBO:0052614"}


id: FYPO:0007056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from the Golgi to other parts of the cell is abnormal..","definition_xrefs":["GO:0006892","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal post-Golgi vesicle-mediated transport","synonyms":[{"name":"abnormal exit from TGN","type":"exact"},{"name":"abnormal post-Golgi transport","type":"exact"},{"name":"abnormal post-Golgi vesicle-mediated transport during mitotic cell cycle","type":"related"},{"name":"abnormal post-Golgi vesicle-mediated transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007056"}


id: PBO:0046153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 1","termid":"PBO:0046153"}


id: GO:0102083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromonapterin = glycolaldehyde + 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol.","definition_xrefs":["GOC:pz","PMID:15107504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"7,8-dihydromonapterin aldolase activity","secondary_identifiers":["MetaCyc:RXN-10857"],"termid":"GO:0102083"}


id: FYPO:0003602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is abolished.","definition_xrefs":["PomBase:mah","PMID:24298023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished mRNA splicing, via spliceosome","synonyms":[{"name":"abolished mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abolished mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abolished nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"abolished splicing","type":"broad"},{"name":"mRNA splicing via spliceosome abolished","type":"exact"}],"termid":"FYPO:0003602"}


id: PBO:0030518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_benomyl","termid":"PBO:0030518"}


id: PBO:0045895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 7","termid":"PBO:0045895"}


id: PBO:0046784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 4","termid":"PBO:0046784"}


id: SO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence motif is a nucleotide or amino-acid sequence pattern that may have biological significance.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/Sequence_motif"],"synonyms":[{"name":"sequence motif","type":"related"}],"termid":"SO:0001683"}


id: GO:0090633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + KDN = diphosphate + CMP-KDN.","definition_xrefs":["ISBN:978-1-60805-067-3","PMID:8381411","PMID:11479279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"keto-deoxynonulosonic acid (KDN) cytidylyltransferase activity","synonyms":[{"name":"CMP-KDN synthetase activity","type":"exact"},{"name":"cytidine 5'-monophospho-2-Keto-3-deoxy-D-glycero-D-galacto-nononic acid synthetase activity","type":"exact"}],"termid":"GO:0090633"}


id: GO:0032901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotrophin production","synonyms":[{"name":"activation of neurotrophin production","type":"narrow"},{"name":"stimulation of neurotrophin production","type":"narrow"},{"name":"up regulation of neurotrophin production","type":"exact"},{"name":"up-regulation of neurotrophin production","type":"exact"},{"name":"upregulation of neurotrophin production","type":"exact"}],"termid":"GO:0032901"}


id: PBO:0041635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 1","termid":"PBO:0041635"}


id: GO:0009412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heavy metal stimulus. Heavy metals are those metals that can form a coordination bond with a protein; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete response to heavy metal (obsolete GO:0009412)","synonyms":[{"name":"response to heavy metal","type":"exact"}],"termid":"GO:0009412"}


id: PR:Q9P7B2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps802 gene.","definition_xrefs":["UniProtKB:Q9P7B2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.05","synonyms":[{"name":"Spom972h-rps802","type":"exact"}],"termid":"PR:Q9P7B2"}


id: PBO:0079783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A4","termid":"PBO:0079783"}


id: GO:0062184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + reduced [NADPH--hemoprotein reductase] + testosterone = 16beta,17beta-dihydroxyandrost-4-en-3-one + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:21289075","RHEA:46304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"testosterone 16-beta-hydroxylase activity","termid":"GO:0062184"}


id: PBO:0075427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPAG16 divergent transcript","termid":"PBO:0075427"}


id: PBO:0066686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 1","termid":"PBO:0066686"}


id: PBO:0091421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Obg family, human OLA1 ortholog, implicated in mitochondrial translation, ribosome assembly, or tRNA metabolism","termid":"PBO:0091421"}


id: PBO:0081747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 677","termid":"PBO:0081747"}


id: GO:0039693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral DNA genome.","definition_xrefs":["GOC:jl","GOC:bf","VZ:915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"viral DNA genome replication","secondary_identifiers":["GO:0039681"],"synonyms":[{"name":"DNA-dependent viral DNA replication","type":"exact"},{"name":"viral DNA replication","type":"exact"},{"name":"viral DNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039693"}


id: PBO:0005125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSIG domain protein","termid":"PBO:0005125"}


id: PBO:0047900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q31.2)","termid":"PBO:0047900"}


id: PBO:0084287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein that acts as a membrane anchor for Ste50p; involved in the signaling branch of the high-osmolarity glycerol (HOG) pathway and as a regulator of the filamentous growth pathway; overproduction blocks cell cycle arrest in the presence of mating pheromone; relocalizes from vacuole to plasma membrane upon DNA replication stress","termid":"PBO:0084287"}


id: PBO:0064264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and coiled-coil domain containing D1","termid":"PBO:0064264"}


id: GO:0060120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become an inner ear receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell fate commitment","synonyms":[{"name":"inner ear hair cell fate commitment","type":"exact"}],"termid":"GO:0060120"}


id: PATO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Female quality of having complete, unaltered reproductive organs","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female","termid":"PATO:0000383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intact female","termid":"PATO:0002365"}


id: GO:0047691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aspulvinone E + 2 dimethylallyl diphosphate = aspulvinone H + 2 diphosphate.","definition_xrefs":["EC:2.5.1.35","RHEA:13809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"aspulvinone dimethylallyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03799","MetaCyc:ASPULVINONE-DIMETHYLALLYLTRANSFERASE-RXN"],"synonyms":[{"name":"dimethylallyl pyrophosphate:aspulvinone dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:aspulvinone-E dimethylallyltransferase activity","type":"related"}],"termid":"GO:0047691"}


id: PBO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology_during_vegetative_growth","termid":"PBO:0031368"}


id: PBO:0061416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y1","termid":"PBO:0061416"}


id: GO:0072199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the ureter gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:0072199"}


id: PR:Q10303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone cofactor E-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein alp21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.10","secondary_identifiers":["UniProtKB:Q10303"],"synonyms":[{"name":"Spom972h-TBCEL","type":"exact"},{"name":"altered polarity protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of tsm one protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10303"}


id: PBO:0048850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone receptor","termid":"PBO:0048850"}


id: PBO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 16","termid":"PBO:0071475"}


id: GO:1902336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinal ganglion cell axon guidance.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:21658587","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"},{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"positively_regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinal ganglion cell axon guidance","synonyms":[{"name":"activation of retinal ganglion cell axon guidance","type":"narrow"},{"name":"activation of retinal ganglion cell axon pathfinding","type":"narrow"},{"name":"positive regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"upregulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"upregulation of retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:1902336"}


id: PBO:0085144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase; methylates adenine (m1A) of large subunit (LSU) rRNA at position 2142; belongs to Rossmann fold superfamily; null mutant exhibits abnormal lipid metabolic phenotype; not an essential gene","termid":"PBO:0085144"}


id: PBO:0038901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor B3","termid":"PBO:0038901"}


id: PBO:0082562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone and import receptor for newly-synthesized class I PMPs; binds peroxisomal membrane proteins (PMPs) in the cytoplasm and delivers them to the peroxisome for subsequent insertion into the peroxisomal membrane; interacts with Myo2p and contributes to peroxisome partitioning","termid":"PBO:0082562"}


id: GO:0106426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tge kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"regulates","term_name":"kainate selective glutamate receptor signaling pathway","termid":"GO:0098991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}


id: PBO:0067546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 692, pseudogene","termid":"PBO:0067546"}


id: PBO:0081480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 355, pseudogene","termid":"PBO:0081480"}


id: MOD:01058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dichlorobenzyl","synonyms":[{"name":"Dcb","type":"exact"}],"termid":"MOD:01058"}


id: PBO:0013087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp43","termid":"PBO:0013087"}


id: GO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAS small monomeric GTPase activity (obsolete GO:0003930)","synonyms":[{"name":"RAS small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003930"}


id: GO:2000228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of pancreatic A cell differentiation","termid":"GO:2000226"},{"relation_name":"positively_regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic A cell differentiation","synonyms":[{"name":"positive regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000228"}


id: PBO:0018157
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspers-Huttenlocher Syndrome","termid":"PBO:0018157"}


id: GO:0004894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete T cell receptor activity (obsolete GO:0004894)","synonyms":[{"name":"T cell receptor activity","type":"exact"}],"termid":"GO:0004894"}


id: GO:0120171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that forms at the cell cortex in response to pheromone treatment and is required for the polarized growth of haploid yeast cells towards a mating partner during yeast mating. In the yeast Saccharomyces cerevisiae, this complex consists of Cdc24p, Far1p, Ste4p (G-protein beta subunit) and Ste18p (G-protein gamma subunit).","definition_xrefs":["PMID:10087263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cdc24p-Far1p-Gbetagamma complex","synonyms":[{"name":"CDC24-FAR1-BG complex","type":"exact"},{"name":"CDC24-FAR1-Gbetagamma complex","type":"exact"},{"name":"Cdc24p-Far1p-BG complex","type":"exact"}],"termid":"GO:0120171"}


id: GO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the 7-methylguanosine cap at the 5' end of a nascent messenger RNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cap binding (obsolete GO:0003731)","synonyms":[{"name":"mRNA cap binding","type":"exact"}],"termid":"GO:0003731"}


id: GO:0031076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye development","termid":"GO:0043010"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic camera-type eye development","synonyms":[{"name":"embryonic eye development","type":"exact"}],"termid":"GO:0031076"}


id: GO:0015905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bicyclomycin across a lipid bilayer, from one side of a membrane to the other. Bicyclomycin (or bicozamycin) is an antibacterial drug often used as a livestock feed additive.","definition_xrefs":["PMID:20067529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"bicyclomycin transmembrane transport","synonyms":[{"name":"bicyclomycin transport","type":"broad"}],"termid":"GO:0015905"}


id: PBO:0064187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA pseudogene 1","termid":"PBO:0064187"}


id: FYPO:0006727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA strand elongation involved in mitotic nuclear DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic DNA replication elongation","synonyms":[{"name":"abolished DNA strand elongation involved in mitotic DNA replication","type":"exact"},{"name":"abolished DNA strand elongation involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"abolished mitotic DNA replication elongation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic DNA replication elongation during vegetative growth","type":"exact"},{"name":"mitotic DNA replication elongation abolished","type":"exact"}],"termid":"FYPO:0006727"}


id: GO:0015489
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70491],"is_not":false,"summary":null,"term":"GO:0015489"}]},"cv_name":"molecular_function","definition":"Enables the transfer of putrescine from one side of a membrane to the other. Putrescine is 1,4-diaminobutane, the polyamine formed by decarboxylation of ornithine and the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"putrescine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015489","terms_by_termid":{"GO:0015489":null}}


id: PR:Q9UTK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTK1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein cox16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.08","synonyms":[{"name":"Spom972h-cox16","type":"exact"}],"termid":"PR:Q9UTK1"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: PBO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT Organizer","termid":"PBO:0005594"}


id: GO:1903980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microglial cell activation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","PMID:19100238","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macrophage activation","termid":"GO:0043032"},{"relation_name":"is_a","term_name":"positive regulation of neuroinflammatory response","termid":"GO:0150078"},{"relation_name":"is_a","term_name":"regulation of microglial cell activation","termid":"GO:1903978"},{"relation_name":"positively_regulates","term_name":"microglial cell activation","termid":"GO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglial cell activation","synonyms":[{"name":"activation of microglial cell activation","type":"narrow"},{"name":"up regulation of microglial cell activation","type":"exact"},{"name":"up-regulation of microglial cell activation","type":"exact"},{"name":"upregulation of microglial cell activation","type":"exact"}],"termid":"GO:1903980"}


id: GO:0098619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNASec + L-Ser + ATP = Ser-tRNASec + AMP + diphosphate.","definition_xrefs":["PMID:8890909","PMID:9431993","PMID:9637248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0140101","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"selenocysteine-tRNA ligase activity","secondary_identifiers":["Reactome:R-HSA-2408526"],"termid":"GO:0098619"}


id: GO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein autoubiquitination","synonyms":[{"name":"protein auto-ubiquitination","type":"exact"},{"name":"protein auto-ubiquitinylation","type":"exact"},{"name":"protein autoubiquitinylation","type":"exact"},{"name":"protein self-ubiquitination","type":"exact"},{"name":"protein self-ubiquitinylation","type":"exact"}],"termid":"GO:0051865"}


id: PBO:0058184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4477b","termid":"PBO:0058184"}


id: GO:0019927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to tryptophyl quinone to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone, a cofactor found at the active site of amine dehydrogenase.","definition_xrefs":["RESID:AA0313","PDB:1JJU","PMID:11555656","PMID:11717396"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone (obsolete GO:0019927)","termid":"GO:0019927"}


id: PBO:0060715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 12","termid":"PBO:0060715"}


id: GO:0070253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"somatostatin secretion","termid":"GO:0070253"}


id: PBO:0083316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF GAT1/YFL021W","termid":"PBO:0083316"}


id: FYPO:0003200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a transcription regulatory region by a gene product is normal (i.e. indistinguishable from wild type) during a cellular response to phosphate starvation. The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription regulatory region sequence-specific DNA binding","termid":"FYPO:0007382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal transcription regulatory region sequence-specific DNA binding during cellular response to phosphate starvation","synonyms":[{"name":"normal promoter binding during cellular response to phosphate starvation","type":"related"},{"name":"normal sequence-specific DNA binding at transcription regulatory region during cellular response to phosphate starvation","type":"exact"},{"name":"normal transcription regulatory region binding during cellular response to phosphate starvation","type":"exact"},{"name":"normal transcription regulatory region binding during phosphate starvation","type":"exact"}],"termid":"FYPO:0003200"}


id: GO:0030320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of monovalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular monovalent inorganic anion homeostasis (obsolete GO:0030320)","termid":"GO:0030320"}


id: GO:0034269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin catabolic process","termid":"GO:0009823"},{"relation_name":"is_a","term_name":"discadenine metabolic process","termid":"GO:0034267"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"discadenine catabolic process","synonyms":[{"name":"discadenine breakdown","type":"exact"},{"name":"discadenine catabolism","type":"exact"},{"name":"discadenine degradation","type":"exact"}],"termid":"GO:0034269"}


id: PBO:0003949
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.11","termid":"PBO:0003949"}


id: GO:0160049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cGAS/STING signaling pathway.","definition_xrefs":["PMID:29875158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"cGAS/STING signaling pathway","termid":"GO:0140896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cGAS/STING signaling pathway","termid":"GO:0160049"}


id: GO:0030459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK (mating sensu Fungi) (obsolete GO:0030459)","synonyms":[{"name":"inactivation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030459"}


id: GO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of hard tissues that consist mainly of inorganic compounds, and also contain a small amounts of organic matrices that are believed to play important roles in their formation.","definition_xrefs":["PMID:15132736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biomineral tissue development","secondary_identifiers":["Wikipedia:Biomineralization"],"termid":"GO:0031214"}


id: PBO:0088486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cxr1","termid":"PBO:0088486"}


id: PBO:0054692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2101","termid":"PBO:0054692"}


id: PBO:0075262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 15","termid":"PBO:0075262"}


id: GO:0060806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cell differentiation that contributes to the progression of the placenta over time, from its initial condition to its mature state.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in embryonic placenta development","termid":"GO:0060800"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation involved in embryonic placenta development","termid":"GO:0060806"}


id: GO:1900968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sarcinapterin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"sarcinapterin metabolic process","termid":"GO:1900867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of sarcinapterin metabolic process","synonyms":[{"name":"regulation of sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900968"}


id: PBO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Mca1 (predicted)","termid":"PBO:0013780"}


id: GO:0045007
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90251],"is_not":false,"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"},{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"depurination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Depurination"],"termid":"GO:0045007","terms_by_termid":{"GO:0045007":null}}


id: PBO:0059362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 9","termid":"PBO:0059362"}


id: PBO:0043641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPS3 pseudogene 1","termid":"PBO:0043641"}


id: PBO:0071307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 30","termid":"PBO:0071307"}


id: GO:1904929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any coreceptor activity that is involved in Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","GOC:bf","PMID:24431302","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in Wnt signaling pathway, planar cell polarity pathway (obsolete GO:1904929)","synonyms":[{"name":"Wnt co-receptor activity, non-canonical signaling","type":"broad"},{"name":"Wnt co-receptor, non-canonical pathway","type":"broad"},{"name":"Wnt/PCP co-receptor activity","type":"exact"},{"name":"coreceptor activity involved in PCP pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor activity involved in planar cell polarity pathway","type":"exact"},{"name":"coreceptor, insoluble ligand activity involved in PCP pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in PCP pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in planar cell polarity pathway","type":"related"}],"termid":"GO:1904929"}


id: GO:0043963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts an adenylate cyclase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host adenylate cyclase-mediated signal transduction (obsolete GO:0043963)","termid":"GO:0043963"}


id: PR:P36209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sts1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(24(24(1)))-sterol reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.07c","synonyms":[{"name":"C-24(28) sterol reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sts1","type":"exact"},{"name":"sterol Delta(24(28))-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36209"}


id: PBO:0032730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Smp3 (predicted)","termid":"PBO:0032730"}


id: PBO:0077995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha constant","termid":"PBO:0077995"}


id: PBO:0049692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid oxidase 2","termid":"PBO:0049692"}


id: GO:0035356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of triglyceride within a cell.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"triglyceride homeostasis","termid":"GO:0070328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular triglyceride homeostasis","synonyms":[{"name":"cellular triglyceride homeostasis","type":"exact"}],"termid":"GO:0035356"}


id: PBO:0110235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER and nuclear envelope ubiquitin-protein ligase E3 Doa10","termid":"PBO:0110235"}


id: PBO:0043624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol-O-methyltransferase domain containing 1","termid":"PBO:0043624"}


id: GO:1900205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric nephron tubule development.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:17314325","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900205"}


id: PBO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma E, pseudogene","termid":"PBO:0043960"}


id: PBO:0081224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 4","termid":"PBO:0081224"}


id: GO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a intermediate mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate determination","synonyms":[{"name":"intermediate mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048394"}


id: FYPO:0000702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that protein affects the binding of one protein to another. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"protein-protein interaction phenotype","synonyms":[{"name":"fission yeast protein binding phenotype","type":"exact"},{"name":"fission yeast protein-protein interaction phenotype","type":"exact"},{"name":"protein binding phenotype","type":"exact"}],"termid":"FYPO:0000702"}


id: PBO:0044206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 4","termid":"PBO:0044206"}


id: PBO:0045333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK8 antisense RNA 2","termid":"PBO:0045333"}


id: PBO:0064958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 10","termid":"PBO:0064958"}


id: GO:1901479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of benomyl from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transmembrane transporter activity (obsolete GO:1901479)","synonyms":[{"name":"benomyl transporter activity","type":"related"}],"termid":"GO:1901479"}


id: PBO:0067810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 112","termid":"PBO:0067810"}


id: PBO:0078999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 6-1","termid":"PBO:0078999"}


id: GO:0102432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-7-olate + S-adenosyl-L-methionine = rhamnetin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13906"],"termid":"GO:0102432"}


id: PBO:0091831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2427 family conserved fungal protein","termid":"PBO:0091831"}


id: PR:Q10410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOM1-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C1F3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.05","secondary_identifiers":["UniProtKB:Q10410"],"synonyms":[{"name":"Spom972h-TOM1L2","type":"exact"}],"termid":"PR:Q10410"}


id: PBO:0050126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 36","termid":"PBO:0050126"}


id: PBO:0012222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 nuclease","termid":"PBO:0012222"}


id: PBO:0042750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein V","termid":"PBO:0042750"}


id: PBO:0063699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 2","termid":"PBO:0063699"}


id: PBO:0081426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280D","termid":"PBO:0081426"}


id: PR:000050454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-50 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-50, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:31911490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/UnPhos:(T50)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"Spom-rnc1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74919, Thr-50, PR:000026291","type":"narrow"},{"name":"rnc1/UnPhos:(T50)","type":"exact"}],"termid":"PR:000050454"}


id: SO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a sense overlap long non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA_gene","synonyms":[{"name":"sense overlap lncRNA gene","type":"exact"},{"name":"sense overlap ncRNA gene","type":"exact"},{"name":"sense_overlap_lncRNA_gene","type":"exact"}],"termid":"SO:0002183"}


id: PATO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"normal","synonyms":[{"name":"average","type":"related"}],"termid":"PATO:0000461"}


id: PBO:0067966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 268","termid":"PBO:0067966"}


id: FYPO:0003873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah","PMID:20133687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased reactive oxygen species level during G0","synonyms":[{"name":"increased cellular ROS level during G0","type":"exact"},{"name":"increased reactive oxygen species accumulation during G0","type":"related"},{"name":"increased reactive oxygen species level during cell quiescence","type":"exact"},{"name":"increased reactive oxygen species level during quiescence","type":"exact"}],"termid":"FYPO:0003873"}


id: GO:0030728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of a mature ovum/oocyte from an ovary.","definition_xrefs":["ISBN:0878932437","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation","secondary_identifiers":["Wikipedia:Ovulation"],"termid":"GO:0030728"}


id: PBO:0079490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 11","termid":"PBO:0079490"}


id: PBO:0060840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament heavy pseudogene 1","termid":"PBO:0060840"}


id: PATO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being linear, very narrow, tapering to a very fine point from a narrow base.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear","termid":"PATO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subulate","synonyms":[{"name":"awl-shaped","type":"exact"},{"name":"needle-like","type":"exact"}],"termid":"PATO:0001954"}


id: PBO:0086743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possible role in iron metabolism and/or amino acid and carbohydrate metabolism; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0086743"}


id: GO:0048362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the flower stem.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pedicel mucilage metabolic process","synonyms":[{"name":"pedicel mucilage metabolism","type":"exact"}],"termid":"GO:0048362"}


id: GO:0003281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventricular septum over time from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum development","termid":"GO:0003279"},{"relation_name":"part_of","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum development","synonyms":[{"name":"interventricular septum development","type":"exact"},{"name":"septum inferius development","type":"narrow"}],"termid":"GO:0003281"}


id: GO:1901774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lincomycin.","definition_xrefs":["GOC:TermGenie","PMID:8577249","UniPathway:UPA00161","GOC:yaf","MetaCyc:PWY-6955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"lincomycin metabolic process","termid":"GO:1901772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"lincomycin biosynthetic process","synonyms":[{"name":"lincomycin formation","type":"exact"},{"name":"lincomycin synthesis","type":"exact"},{"name":"lincomycin anabolism","type":"exact"},{"name":"lincomycin biosynthesis","type":"exact"}],"termid":"GO:1901774"}


id: FYPO:0001985
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"}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the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02695:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02695","name":"tip1delta","uniquename":"SJAG_02695:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic 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id: PBO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.7","termid":"PBO:0001373"}


id: GO:0102066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + alpha-patchoulene.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"alpha-patchoulene synthase activityy","secondary_identifiers":["MetaCyc:RXN-10603"],"termid":"GO:0102066"}


id: GO:0140806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartyl-[protein] + NAD+ = 4-O-(ADP-D-ribosyl)-L-aspartyl-[protein] + nicotinamide.","definition_xrefs":["PMID:25043379","PMID:19764761","RHEA:54424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"NAD+- protein-aspartate ADP-ribosyltransferase activity","termid":"GO:0140806"}


id: PBO:0034052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_vector","termid":"PBO:0034052"}


id: GO:0015745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which tartrate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"tartrate transmembrane transport","synonyms":[{"name":"tartrate transport","type":"related"}],"termid":"GO:0015745"}


id: PBO:0049056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 61","termid":"PBO:0049056"}


id: GO:1904625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22988142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glycinergic","termid":"GO:0060093"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"negatively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glycine secretion, neurotransmission","synonyms":[{"name":"down regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"downregulation of glycine secretion, neurotransmission","type":"exact"},{"name":"inhibition of glycine secretion, neurotransmission","type":"narrow"}],"termid":"GO:1904625"}


id: PBO:0058459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5188","termid":"PBO:0058459"}


id: PR:Q9P3T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01455","PANTHER:PTHR15139:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-specific chaperone C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.08c","secondary_identifiers":["UniProtKB:Q9P3T8"],"synonyms":[{"name":"CFC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TBCC","type":"exact"},{"name":"tubulin-folding cofactor C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3T8"}


id: GO:0016432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA uridine = 5'-methylthioadenosine + tRNA 3-(3-amino-3-carboxypropyl)-uridine.","definition_xrefs":["EC:2.5.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0140098","GO:0140101","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA-uridine aminocarboxypropyltransferase activity","secondary_identifiers":["RHEA:12300","MetaCyc:2.5.1.25-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA-uridine 3-(3-amino-3-carboxypropyl)transferase activity","type":"related"}],"termid":"GO:0016432"}


id: GO:0099644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to presynapse","termid":"GO:1905383"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to presynaptic membrane","synonyms":[{"name":"protein localisation in presynaptic membrane","type":"exact"},{"name":"protein localisation to presynaptic membrane","type":"exact"},{"name":"protein localization in presynaptic membrane","type":"exact"}],"termid":"GO:0099644"}


id: PBO:0055395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2825","termid":"PBO:0055395"}


id: PBO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 110","termid":"PBO:0042051"}


id: GO:0102874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-16:0-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-16:0-2-18:3-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:17064923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-16:0-2-18:2-digalactosyldiacylglycerol desaturase activity","secondary_identifiers":["EC:1.14.19.35","MetaCyc:RXN-8365"],"termid":"GO:0102874"}


id: GO:1900748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor signaling pathway","termid":"GO:1900746"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor signaling pathway","synonyms":[{"name":"activation of VEGF signaling","type":"exact"},{"name":"activation of VEGF-activated signaling pathway","type":"exact"},{"name":"activation of vascular endothelial growth factor signaling pathway","type":"narrow"},{"name":"activation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"positive regulation of VEGF signaling","type":"exact"},{"name":"positive regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"positive regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up regulation of VEGF signaling","type":"exact"},{"name":"up regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up-regulation of VEGF signaling","type":"exact"},{"name":"up-regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"upregulation of VEGF signaling","type":"exact"},{"name":"upregulation of VEGF-activated signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:1900748"}


id: MOD:00999
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00404. Remap to MOD:00404.","definition_xrefs":["DeltaMass:90"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00999 homoseryl lactone (obsolete MOD:00999)","termid":"MOD:00999"}


id: GO:1904060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of locomotor rhythm.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16310969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of locomotor rhythm","termid":"GO:1904059"},{"relation_name":"negatively_regulates","term_name":"locomotor rhythm","termid":"GO:0045475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of locomotor rhythm","synonyms":[{"name":"down regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"down regulation of locomotor rhythm","type":"exact"},{"name":"down-regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"down-regulation of locomotor rhythm","type":"exact"},{"name":"downregulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"downregulation of locomotor rhythm","type":"exact"},{"name":"inhibition of circadian locomotor activity rhythm","type":"narrow"},{"name":"inhibition of locomotor rhythm","type":"narrow"},{"name":"negative regulation of circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:1904060"}


id: GO:0010982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of high-density lipoprotein particle clearance. High-density lipoprotein particle clearance is the process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"high-density lipoprotein particle clearance","termid":"GO:0034384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of high-density lipoprotein particle clearance","termid":"GO:0010982"}


id: MOD:00214
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-serine residue to the polymer dermatan 4-sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["PubMed:3472204","PubMed:2914936","RESID:AA0209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"beta-heparin","type":"exact"},{"name":"chondroitin sulfate B","type":"exact"},{"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"},{"name":"poly[beta-1,4-L-idopyranuronosyl-alpha-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine","type":"exact"}],"termid":"MOD:00214"}


id: GO:0061551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion development","synonyms":[{"name":"trigeminal ganglia development","type":"related"}],"termid":"GO:0061551"}


id: SO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence ACAAT, found in promoters of mating type M-specific genes in fission yeast and bound by the transcription factor Mat1-Mc.","definition_xrefs":["PMID:9233811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_M_box","synonyms":[{"name":"mating type M-box","type":"exact"}],"termid":"SO:0001852"}


id: PBO:0044572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger pseudogene 2","termid":"PBO:0044572"}


id: PR:O14009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.06c","synonyms":[{"name":"Spom972h-SPAC29A4.06c","type":"exact"},{"name":"coiled-coil domain-containing protein 55 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14009"}


id: PBO:0047684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 1","termid":"PBO:0047684"}


id: GO:1905557
data:
  {"annotated_genes":["SJAG_00840","SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89252,98921],"is_not":false,"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["PMID:18765790","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane disassembly","termid":"GO:0010549"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic nuclear envelope disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"regulation of mitotic nuclear envelope degradation","type":"exact"}],"termid":"GO:1905557","terms_by_termid":{"GO:1905557":null}}


id: PBO:0087124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase involved in mRNA 5' capping; subunit of mRNA capping enzyme, which is a heterotetramer composed of a Cet1p homodimer and two molecules of guanylyltransferase Ceg1p; Cet1p also has a role in regulation of RNAPII pausing at promoter-proximal sites; interaction between Cet1p and Ceg1p is required for Ceg1p nuclear import; mammalian enzyme is single bifunctional polypeptide; human homolog RNGTT can complement yeast cet1 null mutant","termid":"PBO:0087124"}


id: GO:0035373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chondroitin sulfate proteoglycan, any proteoglycan containing chondroitin sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan binding","termid":"GO:0035373"}


id: PBO:0057677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268a","termid":"PBO:0057677"}


id: PBO:0056113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase like 1","termid":"PBO:0056113"}


id: GO:0048668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the shafts of existing axons.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting","synonyms":[{"name":"axon branching","type":"broad"}],"termid":"GO:0048668"}


id: PBO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiator methionine tRNA 2'-O-ribosyl phosphate transferase (predicted)","termid":"PBO:0001755"}


id: GO:0004237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides.","definition_xrefs":["EC:3.4.13.19"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane dipeptidase activity (obsolete GO:0004237)","secondary_identifiers":["MetaCyc:3.4.13.19-RXN"],"synonyms":[{"name":"DPH I activity","type":"narrow"},{"name":"MDP","type":"related"},{"name":"aminodipeptidase activity","type":"related"},{"name":"dehydropeptidase I (DPH I)","type":"related"},{"name":"dehydropeptidase I activity","type":"related"},{"name":"dipeptide hydrolase","type":"broad"},{"name":"dipeptidyl hydrolase activity","type":"related"},{"name":"glycosyl-phosphatidylinositol-anchored renal dipeptidase activity","type":"related"},{"name":"membrane dipeptidase activity","type":"exact"},{"name":"microsomal dipeptidase activity","type":"narrow"},{"name":"nonspecific dipeptidase activity","type":"related"},{"name":"renal dipeptidase activity","type":"narrow"}],"termid":"GO:0004237"}


id: PBO:0074933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 100","termid":"PBO:0074933"}


id: PBO:0108911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP50 pseudogene 4","termid":"PBO:0108911"}


id: PBO:0080703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 7A","termid":"PBO:0080703"}


id: PBO:0053811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1070","termid":"PBO:0053811"}


id: PBO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCHS1 antisense RNA 1","termid":"PBO:0044627"}


id: GO:0010978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcriptional or post-transcriptional process, arising in non-dividing cells as they age, carried out at the cellular level that results in long-term gene inactivation.","definition_xrefs":["GOC:jp","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing involved in chronological cell aging (obsolete GO:0010978)","termid":"GO:0010978"}


id: PBO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_import_into_nucleus_during_vegetative_growth","termid":"PBO:0036008"}


id: PBO:0007024
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds AP-1 site 5'-TGACTCA-3'","termid":"PBO:0007024"}


id: PBO:0084872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; mitochondrially-encoded; polymorphic in different strains due to variation in number of AAT (asparagine) codons; translated near the mitochondrial inner membrane; may have a role in loss of mitochondrial DNA under stress conditions","termid":"PBO:0084872"}


id: FYPO:0006279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0006369","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal transcription termination","termid":"FYPO:0007463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000294","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal termination of RNA polymerase II transcription","synonyms":[{"name":"normal RNA polymerase II transcription termination","type":"exact"},{"name":"normal termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"normal termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0006279"}


id: GO:0008837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: LL-2,6-diaminopimelate = meso-2,6-diaminopimelate.","definition_xrefs":["RHEA:15393","EC:5.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diaminopimelate epimerase activity","secondary_identifiers":["KEGG_REACTION:R02735","MetaCyc:DIAMINOPIMEPIM-RXN"],"synonyms":[{"name":"LL-2,6-diaminoheptanedioate 2-epimerase activity","type":"related"}],"termid":"GO:0008837"}


id: PBO:0049491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 1","termid":"PBO:0049491"}


id: PBO:0086238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that is required for vacuolar H+-ATPase (V-ATPase) function; peripheral membrane protein; not an actual component of the V-ATPase complex; functions in the assembly of the V-ATPase; localized to the yeast endoplasmic reticulum (ER)","termid":"PBO:0086238"}


id: FYECO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arsenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arsenate","termid":"FYECO:0000258"}


id: GO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose without proceeding through a cyclic ADP-ribose intermediate.","definition_xrefs":["GOC:dph","GOC:pde","GOC:pad","GOC:PARL","PMID:11866528"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD glycohydrolase activity (obsolete GO:0061810)","termid":"GO:0061810"}


id: FYPO:0003566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body separation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body separation","termid":"FYPO:0001733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0000337","FYPO:0000641"],"is_obsolete":false,"name":"delayed onset of mitotic spindle pole body separation","synonyms":[{"name":"delayed mitotic spindle pole body separation","type":"exact"},{"name":"delayed onset of mitotic SPB separation","type":"exact"},{"name":"delayed onset of spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"mitotic spindle pole body separation delayed during vegetative growth","type":"exact"}],"termid":"FYPO:0003566"}


id: PBO:0043251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 10","termid":"PBO:0043251"}


id: PBO:0028606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_pyrithiamine","termid":"PBO:0028606"}


id: PBO:0046404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of polycomb homolog 1","termid":"PBO:0046404"}


id: FYPO:0008033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated, has no septum, and contains one nucleus, and is arrested in mototic S-phase","direct_ancestors":[{"relation_name":"is_a","term_name":"elongated mononucleate aseptate vegetative cell","termid":"FYPO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000005","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"elongated mononucleate aseptate cell with cell cycle arrest in mitotic S-phase","termid":"FYPO:0008033"}


id: PBO:0081511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 417","termid":"PBO:0081511"}


id: GO:1900045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K63-linked ubiquitination","termid":"GO:1900044"},{"relation_name":"is_a","term_name":"negative regulation of protein polyubiquitination","termid":"GO:1902915"},{"relation_name":"negatively_regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein K63-linked ubiquitination","synonyms":[{"name":"down regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"down regulation of protein K63-linked ubiquitination","type":"related"},{"name":"down-regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"down-regulation of protein K63-linked ubiquitination","type":"related"},{"name":"downregulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"downregulation of protein K63-linked ubiquitination","type":"related"},{"name":"inhibition of protein K63-linked polyubiquitination","type":"exact"},{"name":"inhibition of protein K63-linked ubiquitination","type":"related"},{"name":"negative regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900045"}


id: PBO:0017431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_enzyme","termid":"PBO:0017431"}


id: PBO:0073690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 3","termid":"PBO:0073690"}


id: GO:0043980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group to a lysine residue at position 12 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B-K12 acetylation (obsolete GO:0043980)","synonyms":[{"name":"histone H2B acetylation at K12","type":"exact"}],"termid":"GO:0043980"}


id: PBO:0080010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene Y-linked","termid":"PBO:0080010"}


id: GO:1904971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral translation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bhm","PMID:19666601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral translation","synonyms":[{"name":"regulation of viral protein anabolism","type":"exact"},{"name":"regulation of viral protein biosynthesis","type":"exact"},{"name":"regulation of viral protein biosynthetic process","type":"exact"},{"name":"regulation of viral protein formation","type":"exact"},{"name":"regulation of viral protein synthesis","type":"exact"}],"termid":"GO:1904971"}


id: MOD:00251
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and the 5'-end of DNA through a phosphodiester bond to form O-(phospho-5'-DNA)-L-serine.","definition_xrefs":["PubMed:7265205","RESID:AA0246","PubMed:7142163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-DNA)-L-serine","synonyms":[{"name":"(S)-2-amino-3-(5'-deoxyribonucleic acid phosphonoxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-(5'-phospho-DNA)-serine intermediate","type":"exact"},{"name":"MOD_RES O-(5'-phospho-DNA)-serine","type":"exact"},{"name":"O-(phospho-5'-DNA)-L-serine","type":"exact"},{"name":"O3-(phospho-5'-DNA)-L-serine","type":"exact"},{"name":"O3-L-serine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00251"}


id: GO:0051326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase during M phase of mitosis and meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telophase","secondary_identifiers":["Wikipedia:Telophase"],"termid":"GO:0051326"}


id: GO:0008872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["EC:4.2.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"glucarate dehydratase activity","secondary_identifiers":["MetaCyc:GLUCARDEHYDRA-RXN","RHEA:14573"],"synonyms":[{"name":"D-glucarate dehydratase activity","type":"related"},{"name":"D-glucarate hydro-lyase (5-dehydro-4-deoxy-D-glucarate-forming)","type":"related"},{"name":"D-glucarate hydro-lyase activity","type":"related"}],"termid":"GO:0008872"}


id: PR:O14323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.08","synonyms":[{"name":"Spom972h-mcp4","type":"exact"},{"name":"meiotically up-regulated gene 101 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14323"}


id: GO:0097343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ripoptosome, a protein complex whose formation can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["PMID:22274400","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ripoptosome assembly","termid":"GO:0097343"}


id: PBO:0080895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTHDF3 divergent transcript","termid":"PBO:0080895"}


id: GO:0016101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diterpenoid compounds, terpenoids with four isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"diterpenoid metabolic process","synonyms":[{"name":"diterpene metabolic process","type":"narrow"},{"name":"diterpene metabolism","type":"narrow"},{"name":"diterpenoid metabolism","type":"exact"}],"termid":"GO:0016101"}


id: PBO:0069343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 603, pseudogene","termid":"PBO:0069343"}


id: PBO:0078813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA nucleotidyl transferase 1","termid":"PBO:0078813"}


id: GO:0050604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + O2 + taxa-4,11-diene = A + H2O + taxa-4(20),11-dien-5alpha-ol.","definition_xrefs":["RHEA:14049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"taxadiene 5-alpha-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06306","EC:1.14.14.176","MetaCyc:1.14.99.37-RXN"],"synonyms":[{"name":"taxa-4,11-diene,hydrogen-donor:oxygen oxidoreductase (5alpha-hydroxylating)","type":"related"},{"name":"taxadiene 5a-hydroxylase activity","type":"exact"},{"name":"taxadiene 5alpha-hydroxylase activity","type":"related"}],"termid":"GO:0050604"}


id: GO:0035995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a muscle stretch stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["PMID:14583192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle stretch","termid":"GO:0035994"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of muscle stretch","termid":"GO:0035995"}


id: PBO:0073435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b, subunit 4 pseudogene 1","termid":"PBO:0073435"}


id: GO:0033072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of vancomycin, (3S,6R,7R,11R,23S,26S,30aS,36R,38aR)-44-[2-O-(3-amino-2,3,6-trideoxy-3-C-methyl-alpha-L-lyxo-hexopyranosyl)-beta-D-glucopyranosyloxy]-3-(carbamoylmethyl)-10,19-dichloro-2,3,4,5,6,7,23,25,26,36,37,38,38a-tetradecahydro-7,22,28,30,32-pentahydroxy-6-(N-methyl-D-leucyl)-2,5,24,38,39-pentaoxo-1H,22H-23,36-(epiminomethano)-8,11:18,21-dietheno-13,16:31,35-di(metheno)[1,6,9]oxadiazacyclohexadecino[4,5-m][10,2,16]benzoxadiazacyclotetracosine-26-carboxylic acid, a complex glycopeptide from Streptomyces orientalis that inhibits a specific step in the synthesis of the peptidoglycan layer in Gram-positive bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"vancomycin metabolic process","termid":"GO:0033071"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vancomycin biosynthetic process","synonyms":[{"name":"vancomycin anabolism","type":"exact"},{"name":"vancomycin biosynthesis","type":"exact"},{"name":"vancomycin formation","type":"exact"},{"name":"vancomycin synthesis","type":"exact"}],"termid":"GO:0033072"}


id: PR:Q9USX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A puromycin-sensitive aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.05","secondary_identifiers":["UniProtKB:Q9USX1"],"synonyms":[{"name":"Spom972h-NPEPPS","type":"exact"},{"name":"aminopeptidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX1"}


id: GO:0045966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid metabolic process","termid":"GO:0007553"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of ecdysteroid metabolic process","synonyms":[{"name":"activation of ecdysteroid metabolic process","type":"narrow"},{"name":"positive regulation of ecdysteroid metabolism","type":"exact"},{"name":"stimulation of ecdysteroid metabolic process","type":"narrow"},{"name":"up regulation of ecdysteroid metabolic process","type":"exact"},{"name":"up-regulation of ecdysteroid metabolic process","type":"exact"},{"name":"upregulation of ecdysteroid metabolic process","type":"exact"}],"termid":"GO:0045966"}


id: PBO:0028837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing","termid":"PBO:0028837"}


id: GO:1904810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22699897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"negatively_regulates","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dense core granule transport","synonyms":[{"name":"down regulation of dense core granule transport","type":"exact"},{"name":"down regulation of dense core vesicle transport","type":"exact"},{"name":"down-regulation of dense core granule transport","type":"exact"},{"name":"down-regulation of dense core vesicle transport","type":"exact"},{"name":"downregulation of dense core granule transport","type":"exact"},{"name":"downregulation of dense core vesicle transport","type":"exact"},{"name":"inhibition of dense core granule transport","type":"narrow"},{"name":"inhibition of dense core vesicle transport","type":"narrow"},{"name":"negative regulation of dense core vesicle transport","type":"exact"}],"termid":"GO:1904810"}


id: GO:0047681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic alcohol + NADP+ = an aromatic aldehyde + NADPH.","definition_xrefs":["MetaCyc:ARYL-ALCOHOL-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aryl-alcohol dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:17761"],"synonyms":[{"name":"NADPH-linked benzaldehyde reductase activity","type":"related"},{"name":"aryl alcohol dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"aryl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047681"}


id: GO:0047049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxystearate + NAD+ = 2-oxostearate + H+ + NADH.","definition_xrefs":["RHEA:15949","EC:1.1.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R)-2-hydroxy-fatty acid dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.98-RXN","KEGG_REACTION:R03021"],"synonyms":[{"name":"(R)-2-hydroxy-fatty-acid dehydrogenase activity","type":"exact"},{"name":"(R)-2-hydroxystearate:NAD+ oxidoreductase activity","type":"related"},{"name":"2-hydroxy fatty acid oxidase","type":"broad"},{"name":"D-2-hydroxy fatty acid dehydrogenase activity","type":"related"}],"termid":"GO:0047049"}


id: FYPO:0002544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide (obsolete FYPO:0002544)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to H2O2","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during cellular response to hydrogen peroxide","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002544"}


id: PBO:0058104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4319","termid":"PBO:0058104"}


id: FYPO:0005741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal invertase activity","synonyms":[{"name":"abnormal beta-fructofuranosidase activity","type":"exact"}],"termid":"FYPO:0005741"}


id: PATO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration which has regular start and/or end times.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regular duration","termid":"PATO:0001416"}


id: PBO:0089853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc2","termid":"PBO:0089853"}


id: PBO:0071623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 41","termid":"PBO:0071623"}


id: GO:0009726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an endogenous stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of endogenous stimulus","synonyms":[{"name":"perception of endogenous stimulus","type":"related"}],"termid":"GO:0009726"}


id: PBO:0053573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 593","termid":"PBO:0053573"}


id: PBO:0108700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGAP Sbp1","termid":"PBO:0108700"}


id: PBO:0056609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 2","termid":"PBO:0056609"}


id: PBO:0075998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP4 metalloreductase","termid":"PBO:0075998"}


id: PBO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar to fragment of cox1 intron protein","termid":"PBO:0003023"}


id: PBO:0055063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2479","termid":"PBO:0055063"}


id: SO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of bacterial chromosome replication.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriC","synonyms":[{"name":"origin of bacterial chromosome replication","type":"exact"}],"termid":"SO:0000953"}


id: GO:0043746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N2-acetyl-L-aminoadipate semialdehyde + L-glutamate = 2-oxoglutarate + N2-acetyl-L-lysine.","definition_xrefs":["IMG:01450"],"gene_count":0,"genotype_count":0,"name":"obsolete N2-acetyl-L-lysine aminotransferase activity (obsolete GO:0043746)","synonyms":[{"name":"N-acetyl-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043746"}


id: PBO:0064115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 2","termid":"PBO:0064115"}


id: FYPO:0004839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the plasma membrane is abolished when the cell is subject to glucose starvation, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose depletion","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose deprivation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose limitation","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"}],"termid":"FYPO:0004839"}


id: MOD:01796
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 1x(13)C,3x(2)H C(6)-labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:18688235","PubMed:15782174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"1x(13)C,3x(2)H labeled monomethylated residue","termid":"MOD:01794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H C(6)-labeled L-methionine sulfoxide","termid":"MOD:01796"}


id: PR:O94505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tol1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.04","synonyms":[{"name":"3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DPNPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tol1","type":"exact"},{"name":"halotolerance protein tol1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"target of lithium protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94505"}


id: PBO:0110315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insdc_protein_id","termid":"PBO:0110315"}


id: PR:Q10265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock cognate 71 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00951","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.02c","secondary_identifiers":["UniProtKB:Q10265"],"synonyms":[{"name":"Spom972h-HSPA8","type":"exact"}],"termid":"PR:Q10265"}


id: RO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelopath_of","termid":"RO:0002555"}


id: PBO:0083866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box component of an SCF ubiquitin protein ligase complex; associates with and is required for Fzo1p ubiquitination and for mitochondria fusion; stimulates nuclear export of specific mRNAs; promotes ubiquitin-mediated degradation of Gal4p in some strains","termid":"PBO:0083866"}


id: GO:0015120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of phosphoglycerates from one side of a membrane to the other. Phosphoglycerates are important intermediates in glycolysis and 3-phosphoglycerate is a precursor in serine biosynthesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphoglycerate transmembrane transporter activity","termid":"GO:0015120"}


id: PATO:0000266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000266 absolute visual_acuity (obsolete PATO:0000266)","termid":"PATO:0000266"}


id: PBO:0078472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (GTG) 2-1","termid":"PBO:0078472"}


id: PBO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing G","termid":"PBO:0051790"}


id: PBO:0017760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly protein Mug56 (predicted)","termid":"PBO:0017760"}


id: GO:0140104
data:
  {"annotated_genes":["SJAG_03470","SJAG_01122","SJAG_04180","SJAG_04366","SJAG_03862","SJAG_03798","SJAG_02314","SJAG_02439","SJAG_00532","SJAG_04547","SJAG_01789","SJAG_01909","SJAG_04257","SJAG_00449","SJAG_01496","SJAG_02798","SJAG_04561","SJAG_03366","SJAG_03633","SJAG_02895","SJAG_00586","SJAG_00840","SJAG_00259","SJAG_00277","SJAG_02906","SJAG_01178","SJAG_01005","SJAG_05302","SJAG_00925","SJAG_02065","SJAG_01534","SJAG_02698","SJAG_04038","SJAG_02571","SJAG_00942","SJAG_02661","SJAG_04411","SJAG_04692","SJAG_02998","SJAG_00968","SJAG_03128","SJAG_03905","SJAG_03296","SJAG_02361","SJAG_00170","SJAG_04272","SJAG_01240","SJAG_00569","SJAG_02425","SJAG_03959","SJAG_02437","SJAG_03662","SJAG_04553","SJAG_01418","SJAG_04670","SJAG_04403","SJAG_01238","SJAG_03231","SJAG_02035","SJAG_02416","SJAG_04758","SJAG_03693","SJAG_01083","SJAG_02994","SJAG_00914","SJAG_01358","SJAG_01940","SJAG_01405","SJAG_02198","SJAG_05300","SJAG_00913","SJAG_03867"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"},{"annotations":[94261,95330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140663"},{"annotations":[83551,93576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[91814,98813,90012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[108176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[84561,99947,97392,102671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016531"},{"annotations":[93484,111913,108690,103288,106383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[107898,90215,110132,103949,87817,102924,90832,90457,109610,103945,112937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"},{"annotations":[90698,84364,104815,106291,98164,85578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140713"},{"annotations":[95859,108961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034986"},{"annotations":[88382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140132"},{"annotations":[83495,109199,107348,98761,105538,106117,77144,83516,73662,106900,77277,90219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032977"},{"annotations":[112249,71317,86556,91873,108614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005049"},{"annotations":[91874,109525,88817,76484,97814,72333,112250,73038,70791,75144,88875,72249,74120,73136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061608"},{"annotations":[113557,100034,99387,94334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140597"},{"annotations":[88551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific ion or molecule and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":72,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00277":null,"SJAG_00449":null,"SJAG_00532":null,"SJAG_00569":null,"SJAG_00586":null,"SJAG_00840":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_00968":null,"SJAG_01005":null,"SJAG_01083":null,"SJAG_01122":null,"SJAG_01178":null,"SJAG_01238":null,"SJAG_01240":null,"SJAG_01358":null,"SJAG_01405":null,"SJAG_01418":null,"SJAG_01496":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01940":null,"SJAG_02035":null,"SJAG_02065":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02361":null,"SJAG_02416":null,"SJAG_02425":null,"SJAG_02437":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02661":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02895":null,"SJAG_02906":null,"SJAG_02994":null,"SJAG_02998":null,"SJAG_03128":null,"SJAG_03231":null,"SJAG_03296":null,"SJAG_03366":null,"SJAG_03470":null,"SJAG_03633":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03798":null,"SJAG_03862":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_03959":null,"SJAG_04038":null,"SJAG_04180":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04366":null,"SJAG_04403":null,"SJAG_04411":null,"SJAG_04547":null,"SJAG_04553":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular carrier activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140104","terms_by_termid":{"GO:0000036":null,"GO:0000510":null,"GO:0000511":null,"GO:0005049":null,"GO:0016531":null,"GO:0016532":null,"GO:0032977":null,"GO:0034986":null,"GO:0061608":null,"GO:0140132":null,"GO:0140597":null,"GO:0140663":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: PBO:0086193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to the human peptidyl-tRNA hydrolase gene ICT1; associates with mitochondrial large subunit; may function in translation termination; YOL114C is not an essential gene","termid":"PBO:0086193"}


id: PBO:0080270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 33 pseudogene","termid":"PBO:0080270"}


id: GO:0044059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a endocrine process, any of the hormonal, neural, and secretory processes that release products into the blood or lymph, in the host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host endocrine process (obsolete GO:0044059)","synonyms":[{"name":"regulation by symbiont of host endocrine process","type":"exact"}],"termid":"GO:0044059"}


id: PBO:0064447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan","termid":"PBO:0064447"}


id: PBO:0063739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 4","termid":"PBO:0063739"}


id: PBO:0003842
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TOP2","termid":"PBO:0003842"}


id: PBO:0068410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 1","termid":"PBO:0068410"}


id: GO:0051146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle.","definition_xrefs":["GOC:ai","CL:0000737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell differentiation","synonyms":[{"name":"voluntary muscle cell differentiation","type":"narrow"}],"termid":"GO:0051146"}


id: PR:Q9Y7X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA/RNA-binding protein KIN17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03308","PANTHER:PTHR12805:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIN17-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.09c","secondary_identifiers":["UniProtKB:Q9Y7X9"],"synonyms":[{"name":"Spom972h-KIN","type":"exact"}],"termid":"PR:Q9Y7X9"}


id: GO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases made as part of a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["PMID:12789499","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in defense response","termid":"GO:0002679"}


id: PBO:0026814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_meiotic_cell_cycle","termid":"PBO:0026814"}


id: GO:0102882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = beta-acoradiene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-acoradiene synthase activity","secondary_identifiers":["MetaCyc:RXN-8423"],"termid":"GO:0102882"}


id: PBO:0038527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 1","termid":"PBO:0038527"}


id: GO:0036194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from a muscle cell. A muscle cell is a mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns.","definition_xrefs":["PMID:22464329","GOC:kmv","CL:0000187","PMID:15930100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"muscle cell projection","synonyms":[{"name":"muscle arm","type":"narrow"},{"name":"myocyte projection","type":"exact"},{"name":"myopodia","type":"narrow"}],"termid":"GO:0036194"}


id: GO:0062223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the rate, frequency or extent of somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somatic muscle development","termid":"GO:0062223"}


id: GO:0099012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a neuronal dense core vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule membrane","termid":"GO:0032127"},{"relation_name":"part_of","term_name":"neuronal dense core vesicle","termid":"GO:0098992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"neuronal dense core vesicle membrane","termid":"GO:0099012"}


id: PBO:0053015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 2","termid":"PBO:0053015"}


id: GO:0019108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + NAD+ + H2O = an aromatic acid + NADH + H+.","definition_xrefs":["EC:1.2.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aryl-aldehyde dehydrogenase (NAD) activity","secondary_identifiers":["UM-BBD_reactionID:r0394","MetaCyc:ARYL-ALDEHYDE-DEHYDROGENASE-RXN","RHEA:11804"],"synonyms":[{"name":"aryl-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0019108"}


id: PBO:0082087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; plays a key role in cell wall integrity (CWI) pathway; one of five related enzymes, which are active as heteromultimeric complexes; missense mutations in human homolog PRPS1 are associated with neuropathic Arts syndrome and Charcot-Marie Tooth (CMTX5) disease","termid":"PBO:0082087"}


id: GO:0031469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in bacteria consisting of a proteinaceous coat containing metabolic enzymes whose purpose is the sequestration or concentration of metabolites and which has the appearance of a polygonal granule by electron microscopy.","definition_xrefs":["PMID:34058518","PMID:11844753","PMID:10498708","GOC:js","PMID:12923081","PMID:34340100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial microcompartment","synonyms":[{"name":"BAC","type":"broad"},{"name":"BMC","type":"broad"},{"name":"MCP","type":"broad"},{"name":"polyhedral organelle","type":"related"}],"termid":"GO:0031469"}


id: MOD:01216
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to O5-(carboxamidomethyl)glutamate.","definition_xrefs":["PubMed:12422359","OMSSA:30","Unimod:4#E","PubMed:11510821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized glutamic acid","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"carbamidomethyle","type":"exact"}],"termid":"MOD:01216"}


id: GO:0009213
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate catabolic process","termid":"GO:0009149"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009213","terms_by_termid":{"GO:0046081":null}}


id: GO:0090425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell differentiation","termid":"GO:0090425"}


id: PBO:0072554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding A","termid":"PBO:0072554"}


id: PBO:0068532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 133, pseudogene","termid":"PBO:0068532"}


id: PBO:0069884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1172, pseudogene","termid":"PBO:0069884"}


id: PBO:0053099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 5A","termid":"PBO:0053099"}


id: GO:0043904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isochorismate = salicylate + pyruvate.","definition_xrefs":["GOC:jl","PMID:16248620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"isochorismate pyruvate lyase activity","secondary_identifiers":["MetaCyc:RXN-1981","EC:4.2.99.21","RHEA:27874"],"synonyms":[{"name":"IPL","type":"exact"},{"name":"isochorismate-pyruvate lyase activity","type":"exact"}],"termid":"GO:0043904"}


id: PBO:0002966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase (RNR) inhibitor","termid":"PBO:0002966"}


id: PBO:0064521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit B","termid":"PBO:0064521"}


id: GO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type VI alpha chains in alpha1(VI)alpha2(VI)alpha3(VI) trimers; type VI collagen triple helices associate to form beaded fibrils.","definition_xrefs":["ISBN:0721639976","PMID:19693541","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen beaded filament","termid":"GO:0098647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type VI trimer","termid":"GO:0005589"}


id: GO:0010068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the epidermis.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoderm histogenesis","termid":"GO:0010068"}


id: PBO:0080462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visual system homeobox 1","termid":"PBO:0080462"}


id: PBO:0050286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 3","termid":"PBO:0050286"}


id: MOD:01535
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01535"}


id: GO:0015136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sialic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"}


id: PBO:0004325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA hairpin binding protein (predicted)","termid":"PBO:0004325"}


id: GO:0070360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of an organism, usually a bacterial cell, from one place to another within its host organism, by a process involving continuous polymerization of actin at one pole of the symbiont cell. Some bacteria use host actin for migration from cell to cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","PMID:35285700","PMID:15981456","PMID:15773977","PMID:27997855","PMID:26021574","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization-dependent cell motility","termid":"GO:0070358"},{"relation_name":"is_a","term_name":"cell-to-cell migration in host","termid":"GO:0106259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin polymerization-dependent cell-to-cell migration in host","secondary_identifiers":["GO:0070359"],"synonyms":[{"name":"actin polymerization-dependent cell migration in host","type":"broad"},{"name":"actin polymerization-dependent cell motility involved in migration of symbiont in host","type":"related"},{"name":"migration of symbiont within host by polymerization of host actin","type":"related"}],"termid":"GO:0070360"}


id: PBO:0072818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 12","termid":"PBO:0072818"}


id: PBO:0029671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_actomyosin_contractile_rings_present","termid":"PBO:0029671"}


id: PR:Q9UTQ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1071.11 gene.","definition_xrefs":["UniProtKB:Q9UTQ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1071.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.11","synonyms":[{"name":"Spom972h-SPAC1071.11","type":"exact"}],"termid":"PR:Q9UTQ4"}


id: GO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell receptor signaling pathway","synonyms":[{"name":"activation of T cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of T cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of TCR signaling pathway","type":"exact"},{"name":"stimulation of T cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of T cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"upregulation of T cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050862"}


id: GO:0016644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, disulfide, an iron-sulfur protein, NAD, NADP or oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors (obsolete GO:0016644)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"exact"}],"termid":"GO:0016644"}


id: PBO:0079269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39B","termid":"PBO:0079269"}


id: GO:0060816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on either the paternal or maternal X-chromosome in the XX sex.","definition_xrefs":["GOC:sdb_2009","GOC:dph","PMID:32189388","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation by inactivation of X chromosome","termid":"GO:0009048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"random inactivation of X chromosome","synonyms":[{"name":"rXCI","type":"related"}],"termid":"GO:0060816"}


id: PBO:0089952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid biosynthesis protein","termid":"PBO:0089952"}


id: PBO:0083177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TEL14L-XC, which is a telomeric X element core sequence on the left arm of chromosome XIV","termid":"PBO:0083177"}


id: GO:0099243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"},{"relation_name":"part_of","term_name":"synaptic membrane","termid":"GO:0097060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"extrinsic component of synaptic membrane","termid":"GO:0099243"}


id: PBO:0066997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL1","termid":"PBO:0066997"}


id: PBO:0036269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex actin-like protein Arp8","termid":"PBO:0036269"}


id: GO:0018656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene + O2 + NADH + H+ = H2O + NAD+ + phenanthrene-3,4-oxide.","definition_xrefs":["UM-BBD_reactionID:r0508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phenanthrene 3,4-monooxygenase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0018656"}


id: GO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.","definition_xrefs":["EC:1.1.5.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:RXN-15745","RHEA:18977","Reactome:R-HSA-188467"],"synonyms":[{"name":"FAD-dependent glycerol-3-phosphate dehydrogenase","type":"related"},{"name":"L-glycerophosphate dehydrogenase activity","type":"related"},{"name":"flavin-linked glycerol-3-phosphate dehydrogenase","type":"related"},{"name":"glycerol-3-phosphate CoQ reductase","type":"related"},{"name":"glycerophosphate dehydrogenase activity","type":"related"},{"name":"sn-glycerol-3-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0004368"}


id: PBO:0044516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-2-hydroxyglutarate dehydrogenase","termid":"PBO:0044516"}


id: PBO:0073449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 4","termid":"PBO:0073449"}


id: PBO:0036366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin family protein","termid":"PBO:0036366"}


id: PBO:0017780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine transmembrane transporter (predicted)","termid":"PBO:0017780"}


id: PBO:0050015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, C","termid":"PBO:0050015"}


id: PBO:0086931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane; exocyst association is negatively regulated via phosphorylation by Cdc5p during cytokinesis","termid":"PBO:0086931"}


id: PBO:0076340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 8","termid":"PBO:0076340"}


id: FYPO:0000931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"abnormal protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000931"}


id: PBO:0051577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor A","termid":"PBO:0051577"}


id: GO:0051433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH2 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["PMID:9020082","PMID:12133724","PMID:9704409","PMID:11048732","Prosite:PS01258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BH2 domain binding","termid":"GO:0051433"}


id: GO:0016147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.48"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity, elongation (obsolete GO:0016147)","synonyms":[{"name":"protein-synthesizing GTPase activity, elongation","type":"exact"}],"termid":"GO:0016147"}


id: GO:1904496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substance P secretion, neurotransmission.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of substance P secretion","termid":"GO:1904460"},{"relation_name":"is_a","term_name":"regulation of substance P secretion, neurotransmission","termid":"GO:1904494"},{"relation_name":"positively_regulates","term_name":"substance P secretion, neurotransmission","termid":"GO:1990793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of substance P secretion, neurotransmission","synonyms":[{"name":"activation of substance P secretion, neurotransmission","type":"narrow"},{"name":"up regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"up-regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"upregulation of substance P secretion, neurotransmission","type":"exact"}],"termid":"GO:1904496"}


id: PBO:0024866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC P-loop ATPase subunit Smc6","termid":"PBO:0024866"}


id: PATO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000879 fecundity value (obsolete PATO:0000879)","termid":"PATO:0000879"}


id: PBO:0065056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 10","termid":"PBO:0065056"}


id: PR:O94256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain and MYND-type zinc finger protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.07c","synonyms":[{"name":"Spom972h-set6","type":"exact"}],"termid":"PR:O94256"}


id: PBO:0053553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 560","termid":"PBO:0053553"}


id: PBO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 2","termid":"PBO:0072675"}


id: GO:0006862
data:
  {"annotated_genes":["SJAG_03334","SJAG_00154","SJAG_00612","SJAG_02050","SJAG_00760","SJAG_03452","SJAG_03503","SJAG_04325","SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[73958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[63665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[96642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[96643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[106014,98110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[70395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[102752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[88325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[77711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nucleotide transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006862","terms_by_termid":{"GO:0015866":null,"GO:0035348":null,"GO:0140021":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PATO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000553 relative temperature sensitivity value (obsolete PATO:0000553)","termid":"PATO:0000553"}


id: GO:0098725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell division in which both daughter cells are of the same type.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric cell division","termid":"GO:0098725"}


id: PR:P78954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif45 gene.","definition_xrefs":["UniProtKB:P78954","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.15","synonyms":[{"name":"Spom972h-tif45","type":"exact"},{"name":"eIF-4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4F 25 kDa subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78954"}


id: PBO:0036152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_iMTOC","termid":"PBO:0036152"}


id: GO:0034865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4-trimethylpentanoate + CoASH = 2,4,4-trimethylpentanoyl-CoA + OH-.","definition_xrefs":["UM-BBD_reactionID:r1271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"2,4,4-trimethylpentanoate-CoA ligase activity","termid":"GO:0034865"}


id: PBO:0049345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 3","termid":"PBO:0049345"}


id: PATO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000388 intensity value (obsolete PATO:0000388)","termid":"PATO:0000388"}


id: GO:1905584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an outer hair cell.","definition_xrefs":["GOC:TermGenie","PMID:12062759","PMID:24472721","GO_REF:0000085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer hair cell apoptotic process","synonyms":[{"name":"cochlear outer hair cell apoptosis","type":"narrow"},{"name":"cochlear outer hair cell apoptotic process","type":"exact"},{"name":"outer hair cell apoptosis","type":"narrow"}],"termid":"GO:1905584"}


id: GO:0106438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic reaction :(L-glutamyl)n-L-gamma-glutamyl-L-glutamyl-[protein] + ATP + L-glutamate = (L-glutamyl)n+1-L-gamma-glutamyl-L-glutamyl-[protein] + ADP + H(+) + phosphate.","definition_xrefs":["Rhea:60148","PMID:32747782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity, elongating","termid":"GO:0106438"}


id: GO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a smooth muscle cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foam cell differentiation","termid":"GO:0090077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle derived foam cell differentiation","termid":"GO:0090078"}


id: GO:0006494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein amino acid glycosylation process in which a sugar unit is added to a free alpha-amino or alpha-carboxyl terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal glycosylation (obsolete GO:0006494)","synonyms":[{"name":"protein amino acid terminal glycosylation","type":"exact"}],"termid":"GO:0006494"}


id: PBO:0053622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 664","termid":"PBO:0053622"}


id: GO:0035349
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a membrane. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transport","termid":"GO:0015880"},{"relation_name":"is_a","term_name":"adenosine 3',5'-bisphosphate transmembrane transport","termid":"GO:0071106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"coenzyme A transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"coenzyme A membrane transport","type":"exact"}],"termid":"GO:0035349","terms_by_termid":{"GO:1990559":null}}


id: GO:0098521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential that inhibits muscle contraction.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"},{"relation_name":"is_a","term_name":"inhibitory synapse","termid":"GO:0060077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory neuromuscular junction","termid":"GO:0098521"}


id: GO:0051536
data:
  {"annotated_genes":["SJAG_00244","SJAG_03724","SJAG_04183","SJAG_02908","SJAG_00260","SJAG_00153","SJAG_01058","SJAG_02474","SJAG_01417","SJAG_04756","SJAG_04085","SJAG_01935","SJAG_00601","SJAG_03701","SJAG_00532","SJAG_05280","SJAG_03588","SJAG_02261","SJAG_03658","SJAG_00822","SJAG_00995","SJAG_04639","SJAG_02627","SJAG_00792","SJAG_02895","SJAG_04098","SJAG_02495","SJAG_04016","SJAG_01630","SJAG_00455","SJAG_01841","SJAG_02016","SJAG_03222","SJAG_02994","SJAG_02497","SJAG_01574","SJAG_04736","SJAG_05027","SJAG_04397","SJAG_00217","SJAG_04265","SJAG_00186","SJAG_02818","SJAG_04054","SJAG_03553","SJAG_03243"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89480,98651,102080],"is_not":false,"summary":null,"term":"GO:0051536"},{"annotations":[86175,77982,88606,73553,96897,99737,104404,71308,110103,111655,84354,83630,90437,95772,109797,76830,78330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051537"},{"annotations":[96816,84355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051538"},{"annotations":[84356,91520,73127,78331,109174,90254,69910,94626,106695,96115,90848,93417,100461,87607,72622,104859,100540,95327,108905,99413,94258,102538,107779,104405,104274,109821,83345,92042,100781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051539"}]},"cv_name":"molecular_function","definition":"Binding to an iron-sulfur cluster, a combination of iron and sulfur atoms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cluster binding","termid":"GO:0051540"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00186":null,"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00792":null,"SJAG_00822":null,"SJAG_00995":null,"SJAG_01058":null,"SJAG_01417":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02261":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_02497":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_02895":null,"SJAG_02908":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03243":null,"SJAG_03553":null,"SJAG_03588":null,"SJAG_03658":null,"SJAG_03701":null,"SJAG_03724":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04085":null,"SJAG_04098":null,"SJAG_04183":null,"SJAG_04265":null,"SJAG_04397":null,"SJAG_04639":null,"SJAG_04736":null,"SJAG_04756":null,"SJAG_05027":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"iron-sulfur cluster binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Fe/S binding","type":"exact"},{"name":"iron sulfur cluster binding","type":"exact"},{"name":"iron sulphur cluster binding","type":"exact"},{"name":"iron-sulphur cluster binding","type":"exact"}],"termid":"GO:0051536","terms_by_termid":{"GO:0051536":null,"GO:0051537":null,"GO:0051538":null,"GO:0051539":null}}


id: GO:1903226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23154389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"positively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endodermal cell differentiation","synonyms":[{"name":"activation of endoderm cell differentiation","type":"narrow"},{"name":"activation of endodermal cell differentiation","type":"narrow"},{"name":"positive regulation of endoderm cell differentiation","type":"exact"},{"name":"up regulation of endoderm cell differentiation","type":"exact"},{"name":"up regulation of endodermal cell differentiation","type":"exact"},{"name":"up-regulation of endoderm cell differentiation","type":"exact"},{"name":"up-regulation of endodermal cell differentiation","type":"exact"},{"name":"upregulation of endoderm cell differentiation","type":"exact"},{"name":"upregulation of endodermal cell differentiation","type":"exact"}],"termid":"GO:1903226"}


id: PBO:0052251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 20","termid":"PBO:0052251"}


id: PR:P19117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inorganic pyrophosphatase 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.05","secondary_identifiers":["UniProtKB:P19117"],"synonyms":[{"name":"PPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPA2","type":"exact"},{"name":"pyrophosphate phospho-hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P19117"}


id: PBO:0062776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 4","termid":"PBO:0062776"}


id: PBO:0056830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056830"}


id: GO:0097500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a receptor is transported to, or maintained in, a location within a non-motile cilium.","definition_xrefs":["GOC:cilia","GOC:kmv","PMID:23128241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to non-motile cilium","termid":"GO:0097499"},{"relation_name":"is_a","term_name":"protein localization to ciliary membrane","termid":"GO:1903441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"receptor localization to non-motile cilium","synonyms":[{"name":"receptor localization to nonmotile primary cilium","type":"related"}],"termid":"GO:0097500"}


id: PBO:0007873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin microtubule-binding subunit, p150-Glued Ssm4","termid":"PBO:0007873"}


id: PBO:0082523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-cycle checkpoint S/T protein kinase; required for transient G2/M arrest after DNA damage, damage-induced transcription, and nuclear-to-cytoplasmic redistribution of Rnr2p-Rnr4p after genotoxic stress and iron deprivation; phosphorylates repair protein Rad55p, transcriptional repressor Sml1p, superoxide dismutase, and ribonucleotide reductase inhibitors Crt1p and Dif1p; functions in the Mec1p pathway to regulate dNTP pools and telomere length; postreplicative repair role","termid":"PBO:0082523"}


id: PBO:0044381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily D member 1, pseudogene","termid":"PBO:0044381"}


id: GO:0004501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + Ecdysone + O2 = 20-hydroxyecdysone + A + H2O.","definition_xrefs":["RHEA:14021","EC:1.14.99.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ecdysone 20-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02374","MetaCyc:RXN-18799"],"synonyms":[{"name":"alpha-ecdysone C-20 hydroxylase activity","type":"related"},{"name":"ecdysone 20-hydroxylase activity","type":"exact"},{"name":"ecdysone modification","type":"broad"},{"name":"ecdysone,hydrogen-donor:oxygen oxidoreductase (20-hydroxylating)","type":"related"}],"termid":"GO:0004501"}


id: PBO:0034112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_precedes","termid":"PBO:0034112"}


id: PBO:0084802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; conserved among S. cerevisiae strains; extensively overlaps a Ty1 LTR; YER181C is not an essential gene","termid":"PBO:0084802"}


id: PBO:0055790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 1","termid":"PBO:0055790"}


id: FYPO:0007969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, extend beyond the spindle pole body and are present transiently. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PMID:26031557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0003787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002403","FYPO:0002399","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0000120"],"is_obsolete":false,"name":"short-lived long mitotic spindle microtubules protruding beyond spindle pole body","secondary_identifiers":["PomBase:mlr"],"termid":"FYPO:0007969"}


id: SO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 12-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_12_signal","synonyms":[{"name":"minus 12 signal","type":"exact"}],"termid":"SO:0001673"}


id: FYPO:0003198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to osmotic stress. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"altered RNA level during cellular response to osmotic stress","synonyms":[{"name":"abnormal RNA level during cellular response to osmotic stress","type":"exact"},{"name":"altered RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"altered RNA level during osmotic stress","type":"exact"},{"name":"altered cellular RNA level during cellular response to osmotic stress","type":"exact"},{"name":"altered transcript level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0003198"}


id: PBO:0075122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 172","termid":"PBO:0075122"}


id: GO:0009260
data:
  {"annotated_genes":["SJAG_02038","SJAG_01139","SJAG_02887","SJAG_03290","SJAG_02364","SJAG_MIT15","SJAG_01859","SJAG_04709","SJAG_05204","SJAG_04354","SJAG_06634","SJAG_05024","SJAG_00412","SJAG_01814","SJAG_03708","SJAG_03164","SJAG_04634","SJAG_01471","SJAG_04713","SJAG_00694","SJAG_04845","SJAG_04123","SJAG_07003","SJAG_02105","SJAG_02741","SJAG_03355","SJAG_00985","SJAG_01402","SJAG_00533","SJAG_02006","SJAG_03140","SJAG_MIT37","SJAG_00964","SJAG_05277","SJAG_03925","SJAG_02850","SJAG_01081","SJAG_04681","SJAG_00044","SJAG_02158","SJAG_00133","SJAG_04422","SJAG_03731","SJAG_00982","SJAG_00197","SJAG_04288","SJAG_01298","SJAG_03313","SJAG_01070","SJAG_00866","SJAG_00444","SJAG_02564","SJAG_03114","SJAG_02598","SJAG_01661","SJAG_04007","SJAG_04122","SJAG_04849","SJAG_00438","SJAG_03064","SJAG_00915","SJAG_00427","SJAG_00836","SJAG_04627","SJAG_00542","SJAG_00779","SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77362,75739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[83361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[71221,93147,75815,94865,105380,109572,69966,98669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[88833,93829,84971,107019,111733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[93711,88668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[111127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[112051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[72284,73862,77590,72834,83001,94354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[93464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[111850,73273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[78656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[67802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[77172,84898,70991,71331,78534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[95363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[88385,109968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[72226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[59191,73841,103446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[74607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[73999,95364,97503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[97084,74608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[102657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[93691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[67303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[90230,88691,100219,98906,103953,89282,98289,113995,97087,88277,98935,113986,84659,110872,113991,102997,103085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[112973],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[78660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[84007,109970,88386,83039,87414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[71019,95365,71528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"},{"annotations":[74609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"},{"relation_name":"is_a","term_name":"ribose phosphate biosynthetic 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biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleotide anabolism","type":"exact"},{"name":"ribonucleotide biosynthesis","type":"exact"},{"name":"ribonucleotide formation","type":"exact"},{"name":"ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009260","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0009398":null,"GO:0015937":null,"GO:0015986":null,"GO:0019427":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0035338":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null,"GO:1905706":null,"GO:1990181":null,"GO:2001295":null}}


id: GO:0018576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: catechol + O2 = cis,cis-muconate.","definition_xrefs":["EC:1.13.11.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol dioxygenase activity","termid":"GO:0019114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"catechol 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:CATECHOL-12-DIOXYGENASE-RXN","RHEA:23852","UM-BBD_enzymeID:e0064"],"synonyms":[{"name":"1,2-pyrocatechase activity","type":"related"},{"name":"CD I","type":"related"},{"name":"CD II","type":"related"},{"name":"catechase activity","type":"related"},{"name":"catechol 1,2-oxygenase activity","type":"related"},{"name":"catechol-oxygen 1,2-oxidoreductase activity","type":"related"},{"name":"catechol:oxygen 1,2-oxidoreductase activity","type":"related"},{"name":"pyrocatechase activity","type":"related"},{"name":"pyrocatechol 1,2-dioxygenase activity","type":"related"}],"termid":"GO:0018576"}


id: PBO:0078497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 1-1","termid":"PBO:0078497"}


id: PBO:0031901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein Grp2 (predicted)","termid":"PBO:0031901"}


id: PBO:0034691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA/DNA_annealing_activity","termid":"PBO:0034691"}


id: GO:0015614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-xylose(out) -> ADP + phosphate + D-xylose(in).","definition_xrefs":["RHEA:29899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-xylose transmembrane transporter activity","termid":"GO:0015148"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type D-xylose transporter activity","secondary_identifiers":["EC:7.5.2.10"],"synonyms":[{"name":"ATPase-coupled D-xylose transmembrane transporter activity","type":"related"},{"name":"D-xylose porter activity","type":"broad"},{"name":"D-xylose-importing ATPase activity","type":"related"}],"termid":"GO:0015614"}


id: PBO:0052980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LACTB2 antisense RNA 1","termid":"PBO:0052980"}


id: PBO:0046408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell adhesion molecule","termid":"PBO:0046408"}


id: PBO:0036434
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Counteracter of CENP-A loading Protein","termid":"PBO:0036434"}


id: PR:O60081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm72 gene.","definition_xrefs":["UniProtKB:O60081","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.07","synonyms":[{"name":"Spom972h-trm72","type":"exact"}],"termid":"PR:O60081"}


id: PBO:0003295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex subunit beta subunit Apl2","termid":"PBO:0003295"}


id: PBO:0041995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 40","termid":"PBO:0041995"}


id: PR:O43087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kms2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy meiotic segregation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.12","synonyms":[{"name":"Spom972h-kms2","type":"exact"}],"termid":"PR:O43087"}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: PBO:0055340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2768","termid":"PBO:0055340"}


id: PBO:0043033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B pseudogene 1","termid":"PBO:0043033"}


id: PBO:0054800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2213","termid":"PBO:0054800"}


id: PBO:0028420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ubiquinone_binding","termid":"PBO:0028420"}


id: PBO:0088900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, involved in mitochondrial gene expression","termid":"PBO:0088900"}


id: PBO:0041705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2","termid":"PBO:0041705"}


id: GO:0018904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organic ethers, any anhydride of the general formula R1-O-R2, formed between two identical or nonidentical organic hydroxy compounds.","definition_xrefs":["GOC:pr","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ether metabolic process","synonyms":[{"name":"ether metabolism","type":"exact"},{"name":"organic ether metabolic process","type":"exact"},{"name":"organic ether metabolism","type":"exact"}],"termid":"GO:0018904"}


id: GO:0090399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell aging process associated with the dismantling of a cell as a response to telomere shortening and/or cellular aging.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replicative senescence","termid":"GO:0090399"}


id: FYPO:0006200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to phosphate starvation","synonyms":[{"name":"decreased growth during cellular response to phosphate starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to phosphate starvation","type":"exact"},{"name":"hypersensitive to phosphate starvation","type":"exact"},{"name":"reduced growth in low phosphate","type":"related"},{"name":"sensitive to phosphate depletion","type":"exact"},{"name":"sensitive to phosphate deprivation","type":"exact"},{"name":"sensitive to phosphate ion starvation","type":"exact"},{"name":"sensitive to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to phosphate starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006200"}


id: PBO:0080350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 2 pseudogene","termid":"PBO:0080350"}


id: PBO:0075447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 2","termid":"PBO:0075447"}


id: PBO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM131B antisense RNA 2","termid":"PBO:0047069"}


id: GO:1904458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substance P secretion.","definition_xrefs":["GOC:TermGenie","PMID:11278900","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of substance P secretion","termid":"GO:1904458"}


id: GO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add","PMID:15032583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell proliferation","termid":"GO:0001787"},{"relation_name":"is_a","term_name":"natural killer cell activation involved in immune response","termid":"GO:0002323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation involved in immune response","synonyms":[{"name":"NK cell proliferation during immune response","type":"related"},{"name":"natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0002324"}


id: PBO:0047476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 3","termid":"PBO:0047476"}


id: GO:0021763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the subthalamic nucleus over time from its initial formation until its mature state. The subthalamic nucleus is the lens-shaped nucleus located in the ventral part of the subthalamus on the inner aspect of the internal capsule that is concerned with the integration of somatic motor function.","definition_xrefs":["GOC:dgh","GOC:dph","ISBN:0878937420","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"subthalamus development","termid":"GO:0021539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subthalamic nucleus development","synonyms":[{"name":"corpus luysi development","type":"related"}],"termid":"GO:0021763"}


id: GO:0033067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving macrolides, any of a large group of polyketide compounds that contain a large lactone ring with few or no double bonds and no nitrogen atoms, linked glycosidically to one or more sugar groups. The macrolides include the carbomycins, the erythromycins, oleandomycin, oligomycins, and the spiramycins, and act as antibiotics, mainly against Gram-positive bacteria.","definition_xrefs":["PMID:17298179","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"macrolide metabolic process","synonyms":[{"name":"macrolide metabolism","type":"exact"}],"termid":"GO:0033067"}


id: GO:0010231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that maintains a seed in a dormant state.","definition_xrefs":["ISBN:9781405139830","PMID:9580097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed dormancy process","termid":"GO:0010162"},{"relation_name":"is_a","term_name":"maintenance of dormancy","termid":"GO:0097437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of seed dormancy","termid":"GO:0010231"}


id: PBO:0059163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercaptopyruvate sulfurtransferase","termid":"PBO:0059163"}


id: PBO:0034222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to_morphology_of","termid":"PBO:0034222"}


id: PBO:0089766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase","termid":"PBO:0089766"}


id: PBO:0072064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 2","termid":"PBO:0072064"}


id: GO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of ethylene in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of ethylene levels in host (obsolete GO:0052021)","synonyms":[{"name":"modulation by organism of ethylene levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052021"}


id: GO:0017118
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76867],"is_not":false,"summary":null,"term":"GO:0017118"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lipoyl-5'-AMP + L-lysyl-[lipoyl-carrier protein] = (R)-N6-lipoyl-L-lysyl-[lipoyl-carrier protein] + AMP + 2 H+.","definition_xrefs":["PMID:10103005","RHEA:20473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"lipoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0017118","terms_by_termid":{"GO:0017118":null}}


id: PBO:0068496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 80, pseudogene","termid":"PBO:0068496"}


id: GO:0004954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a prostanoid, any compound based on or derived from the prostanoate structure, to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid receptor activity","termid":"GO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostanoid receptor activity","termid":"GO:0004954"}


id: GO:0003222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the trabecular cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"is_a","term_name":"heart trabecula morphogenesis","termid":"GO:0061384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular trabecula myocardium morphogenesis","synonyms":[{"name":"trabecula carnea morphogenesis","type":"related"}],"termid":"GO:0003222"}


id: GO:1990592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ufmylation process in which a polymer of the ubiquitin-like protein UFM1 is formed by linkages between lysine residues at position 69 of the UFM1 monomers, is added to a protein.","definition_xrefs":["PMID:25219498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyufmylation","termid":"GO:1990564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K69-linked ufmylation","termid":"GO:1990592"}


id: FYPO:0003205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a primary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased primary cell septum thickness","synonyms":[{"name":"decreased primary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased primary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased primary septum thickness","type":"exact"},{"name":"reduced primary cell septum thickness","type":"exact"},{"name":"thin primary septum","type":"exact"}],"termid":"FYPO:0003205"}


id: PBO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 2","termid":"PBO:0060986"}


id: PBO:0068393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 213","termid":"PBO:0068393"}


id: PBO:0080497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor","termid":"PBO:0080497"}


id: GO:0070617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of thiamine diphosphate biosynthetic process","termid":"GO:0070616"},{"relation_name":"negatively_regulates","term_name":"thiamine diphosphate biosynthetic process","termid":"GO:0009229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of thiamine diphosphate biosynthetic process","synonyms":[{"name":"down regulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"down-regulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"downregulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"inhibition of thiamine diphosphate biosynthetic process","type":"narrow"},{"name":"negative regulation of thiamin diphosphate biosynthetic process","type":"exact"},{"name":"negative regulation of thiamine diphosphate anabolism","type":"exact"},{"name":"negative regulation of thiamine diphosphate biosynthesis","type":"exact"},{"name":"negative regulation of thiamine diphosphate formation","type":"exact"},{"name":"negative regulation of thiamine diphosphate synthesis","type":"exact"}],"termid":"GO:0070617"}


id: GO:0036395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of amylase from a cell of the pancreas.","definition_xrefs":["PMID:19028687","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylase secretion","termid":"GO:0036394"},{"relation_name":"part_of","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pancreatic amylase secretion","termid":"GO:0036395"}


id: PBO:0027297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_septum","termid":"PBO:0027297"}


id: GO:0050685
data:
  {"annotated_genes":["SJAG_02018","SJAG_02058","SJAG_01919","SJAG_00996","SJAG_01040","SJAG_00504"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[74463,106042,74390,87593,73295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"positive regulation of mRNA metabolic process","termid":"GO:1903313"},{"relation_name":"positively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00504":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mRNA processing","type":"narrow"},{"name":"stimulation of mRNA processing","type":"narrow"},{"name":"up regulation of mRNA processing","type":"exact"},{"name":"up-regulation of mRNA processing","type":"exact"},{"name":"upregulation of mRNA processing","type":"exact"}],"termid":"GO:0050685","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: PBO:0058817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7974","termid":"PBO:0058817"}


id: PBO:0081581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 510","termid":"PBO:0081581"}


id: PBO:0049105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR160 pseudogene 2","termid":"PBO:0049105"}


id: GO:0018365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (protein)-L-serine = (protein)-D-serine.","definition_xrefs":["EC:5.1.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"protein-serine epimerase activity","secondary_identifiers":["MetaCyc:5.1.1.16-RXN","RHEA:10660"],"synonyms":[{"name":"protein-serine racemase activity","type":"related"}],"termid":"GO:0018365"}


id: MOD:01616
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues and adds three sulfur atoms to form trithiocystine.","definition_xrefs":["RESID:AA0513","PubMed:19438211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysulfide crosslinked residues","termid":"MOD:01620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trithiocystine","synonyms":[{"name":"(2R,2'R)-3,3'-pentasulfane-1,5-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-pentathiobisalanine","type":"exact"},{"name":"bis(2-amino-2-carboxyethyl)pentasulfide","type":"exact"},{"name":"trithiocystine","type":"exact"}],"termid":"MOD:01616"}


id: SO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA_gene","termid":"SO:0002366"}


id: GO:0052716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 hydroquinone + O2 = 4 benzosemiquinone + 4 H2O.","definition_xrefs":["EC:1.10.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroquinone:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:LACCASE-RXN","RHEA:11276","KEGG_REACTION:R00083"],"synonyms":[{"name":"benzenediol:oxygen oxidoreductase activity","type":"broad"},{"name":"laccase reaction","type":"broad"},{"name":"p-diphenol:oxygen oxidoreductase activity","type":"exact"}],"termid":"GO:0052716"}


id: PBO:0034680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_meiosis_I","termid":"PBO:0034680"}


id: GO:0070298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorelay signal transduction system","termid":"GO:0070297"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of phosphorelay signal transduction system","synonyms":[{"name":"down regulation of two-component signal transduction","type":"exact"},{"name":"down-regulation of two-component signal transduction","type":"exact"},{"name":"downregulation of two-component signal transduction","type":"exact"},{"name":"inhibition of two-component signal transduction","type":"narrow"},{"name":"negative regulation of histidyl-aspartyl phosphorelay","type":"exact"},{"name":"negative regulation of two-component signal transduction system (phosphorelay)","type":"narrow"}],"termid":"GO:0070298"}


id: GO:0034610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of oligodeoxyribonucleotides to yield deoxyribonucleoside 5'-phosphates.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA nuclease activity","termid":"GO:0004536"},{"relation_name":"is_a","term_name":"oligonucleotidase activity","termid":"GO:0008946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"oligodeoxyribonucleotidase activity","synonyms":[{"name":"DNA oligonucleotidase activity","type":"exact"}],"termid":"GO:0034610"}


id: GO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"dopamine catabolic process","synonyms":[{"name":"dopamine breakdown","type":"exact"},{"name":"dopamine catabolism","type":"exact"},{"name":"dopamine degradation","type":"exact"}],"termid":"GO:0042420"}


id: GO:0034664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located in the endoplasmic reticulum (ER) and is formed by the association of an immunoglobulin heavy chain with the proteins of the ER chaperone complex; the latter include BiP, GRP94; CaBP1, protein disulfide isomerase (PDI), ERdj3, cyclophilin B, ERp72, GRP170, UDP-glucosyltransferase, and SDF2-L1.","definition_xrefs":["PMID:12475965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Ig heavy chain-bound endoplasmic reticulum chaperone complex","synonyms":[{"name":"Ig heavy chain-bound ER chaperone complex","type":"exact"},{"name":"immunoglobulin heavy chain-bound endoplasmic reticulum chaperone complex","type":"exact"}],"termid":"GO:0034664"}


id: PBO:0056312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 6","termid":"PBO:0056312"}


id: GO:0008519
data:
  {"annotated_genes":["SJAG_04136","SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74491],"is_not":false,"summary":null,"term":"GO:0008519"},{"annotations":[113932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015398"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.","definition_xrefs":["PMID:17710640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04136":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446278","Reactome:R-HSA-446277","Reactome:R-HSA-444419","RHEA:28747","Reactome:R-HSA-444393","GO:0051739","GO:0015251","Reactome:R-HSA-444416","Reactome:R-HSA-5623051","TC:1.A.11"],"synonyms":[{"name":"ammonia transmembrane transporter activity","type":"related"},{"name":"ammonium channel activity","type":"related"}],"termid":"GO:0008519","terms_by_termid":{"GO:0008519":null,"GO:0015398":null}}


id: PBO:0047262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member E","termid":"PBO:0047262"}


id: PBO:0030858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_calcium_level_during_cellular_response_to_salt_stress","termid":"PBO:0030858"}


id: PBO:0028447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_substrate_specificity,_glutathione_synthetase_to_homoglutathione_synthetase_activity","termid":"PBO:0028447"}


id: GO:0180011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which dormant, translationally inactive mRNAs become activated via the elongation of their poly(A) tails in the cytosol.","definition_xrefs":["PMID:21536428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"cytoplasmic polyadenylation","termid":"GO:0180011"}


id: FYPO:0001259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hypoxia","synonyms":[{"name":"decreased RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"decreased RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"decreased RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"decreased transcript level during cellular response to hypoxia","type":"exact"},{"name":"reduced RNA level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001259"}


id: PBO:0058546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6125","termid":"PBO:0058546"}


id: PBO:0053054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00240 antisense RNA regulating promoter methylation","termid":"PBO:0053054"}


id: GO:0010088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the principal food-conducting tissue of a vascular plant.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem or xylem histogenesis","termid":"GO:0010087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phloem development","synonyms":[{"name":"phloem histogenesis","type":"exact"}],"termid":"GO:0010088"}


id: PBO:0016891
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longer transcript expressed during cold shock due to altered 3'-end processing","termid":"PBO:0016891"}


id: PBO:0052037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumping translocation breakpoint pseudogene 1","termid":"PBO:0052037"}


id: FYPO:0000700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000700"}


id: PBO:0068948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 192, pseudogene","termid":"PBO:0068948"}


id: FYPO:0007442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0006378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum membrane","synonyms":[{"name":"normal protein localization to ER membrane","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endoplasmic reticulum membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0007442"}


id: PBO:0087285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence-binding activity of SRP, interacts with the SRP RNA, and mediates binding of SRP to signal receptor; contains GTPase domain","termid":"PBO:0087285"}


id: PR:O13872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12937:SF0","PRO:DNx","OMA:SCHPO02052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 28 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.07c","secondary_identifiers":["UniProtKB:O13872"],"synonyms":[{"name":"ESCRT-I complex subunit vps28 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-VPS28","type":"exact"}],"termid":"PR:O13872"}


id: PBO:0073565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing E","termid":"PBO:0073565"}


id: GO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of butyrate, the anion of butyric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"},{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"butyrate catabolic process","secondary_identifiers":["GO:0043440"],"synonyms":[{"name":"butanoic acid breakdown","type":"exact"},{"name":"butanoic acid catabolic process","type":"exact"},{"name":"butanoic acid catabolism","type":"exact"},{"name":"butanoic acid degradation","type":"exact"},{"name":"butyrate breakdown","type":"exact"},{"name":"butyrate catabolism","type":"exact"},{"name":"butyrate degradation","type":"exact"}],"termid":"GO:0046359"}


id: PBO:0057710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1296","termid":"PBO:0057710"}


id: GO:0031700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adrenomedullin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"adrenomedullin receptor binding","synonyms":[{"name":"adrenomedullin receptor ligand","type":"narrow"}],"termid":"GO:0031700"}


id: GO:1901484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["GOC:vw","GOC:al","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription factor catabolic process (obsolete GO:1901484)","synonyms":[{"name":"down regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor breakdown","type":"exact"},{"name":"down regulation of transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor catabolism","type":"exact"},{"name":"down regulation of transcription factor degradation","type":"exact"},{"name":"down-regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down-regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor breakdown","type":"exact"},{"name":"down-regulation of transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor catabolism","type":"exact"},{"name":"down-regulation of transcription factor degradation","type":"exact"},{"name":"downregulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"downregulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor breakdown","type":"exact"},{"name":"downregulation of transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor catabolism","type":"exact"},{"name":"downregulation of transcription factor degradation","type":"exact"},{"name":"inhibition of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"inhibition of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"inhibition of transcription factor breakdown","type":"exact"},{"name":"inhibition of transcription factor catabolic process","type":"narrow"},{"name":"inhibition of transcription factor catabolism","type":"exact"},{"name":"inhibition of transcription factor degradation","type":"exact"},{"name":"negative regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"negative regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"negative regulation of transcription factor breakdown","type":"exact"},{"name":"negative regulation of transcription factor catabolism","type":"exact"},{"name":"negative regulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901484"}


id: GO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-3-D-galactosyl-sn-2-acylglycerol + acyl-[acyl-carrier protein] = D-galactosyldiacylglycerol + [acyl-carrier protein].","definition_xrefs":["EC:2.3.1.141","MetaCyc:2.3.1.141-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactosylacylglycerol O-acyltransferase activity","secondary_identifiers":["RHEA:17057"],"synonyms":[{"name":"acyl-ACP:lyso-MGDG acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier protein: lysomonogalactosyldiacylglycerol acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:D-galactosylacylglycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0047175"}


id: PBO:0062914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 6","termid":"PBO:0062914"}


id: GO:0061272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric connecting tubule over time, from its formation to the mature structure. The mesonephric connecting tubule is a tubular segment of the mesonephric nephron; it connects the distal tubule to the collecting duct in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric connecting tubule development","synonyms":[{"name":"mesonephric collecting tubule development","type":"exact"},{"name":"mesonephric connecting duct development","type":"related"}],"termid":"GO:0061272"}


id: PR:O94389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 124 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain-containing protein 124 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.12","secondary_identifiers":["UniProtKB:O94389"],"synonyms":[{"name":"Spom972h-CCDC124","type":"exact"}],"termid":"PR:O94389"}


id: GO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming capable of differentiating autonomously into an ectoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["ISBN:0878932437","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"ectodermal cell fate commitment","termid":"GO:0001712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate determination","synonyms":[{"name":"ectoderm cell fate determination","type":"exact"}],"termid":"GO:0001713"}


