# terms

id: PBO:0043566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 4 pseudogene 1","termid":"PBO:0043566"}


id: GO:1900400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of iron ion import.","definition_xrefs":["GOC:TermGenie","GOC:mah","PMID:18622392"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900400)","synonyms":[{"name":"regulation of iron import by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of iron ion import by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:1900400"}


id: GO:1902501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any HOPS complex that is part of a lysosomal membrane.","definition_xrefs":["PMID:23645161","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar HOPS complex","termid":"GO:1902500"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"lysosomal HOPS complex","synonyms":[{"name":"lysosomal membrane HOPS complex","type":"exact"}],"termid":"GO:1902501"}


id: PBO:0070636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 7","termid":"PBO:0070636"}


id: GO:0061193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the taste bud over time, from its formation to the mature state. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"tongue development","termid":"GO:0043586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud development","termid":"GO:0061193"}


id: SO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequences that decrease interactions between biological regions, such as between a promoter, its 5' context and/or the translational unit(s) it regulates. Spacers can affect regulation of translation, transcription, and other biological processes.","definition_xrefs":["PMID:27034378","PMID:20843779","PMID:28422998","PMID:24933158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inert_DNA_spacer","secondary_identifiers":["doi:10.1101/584664"],"synonyms":[{"name":"Inert DNA Spacer","type":"related"}],"termid":"SO:0002223"}


id: GO:0097345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of the apoptotic signaling pathway.","definition_xrefs":["PMID:21041309","GOC:BHF","GOC:mtg_apoptosis","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902110"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0061024","GO:0007005","GO:0006810"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization","synonyms":[{"name":"MOMP","type":"exact"},{"name":"mitochondrial outer membrane permeabilization during apoptotic cell death","type":"broad"},{"name":"mitochondrion outer membrane permeabilization","type":"exact"}],"termid":"GO:0097345"}


id: FYPO:0003005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that has a larger diameter and volume than normal and forms branches, and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with branched, elongated germ tube","termid":"FYPO:0002515"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with swollen elongated germ tube","termid":"FYPO:0002911"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with swollen, branched, elongated germ tube","synonyms":[{"name":"inviable after spore germination with elongated swollen branched germ tube","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen, branched, elongated cell","type":"exact"},{"name":"inviable following spore germination with swollen, branched, elongated germ tube","type":"exact"},{"name":"inviable germinated spore with swollen, branched, elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with swollen, branched, elongated germ tube","type":"exact"}],"termid":"FYPO:0003005"}


id: PBO:0052616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kringle containing transmembrane protein 1","termid":"PBO:0052616"}


id: GO:0008251
data:
  {"annotated_genes":["SJAG_04380","SJAG_04189","SJAG_00352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96402,99492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[71412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine deaminase activity","termid":"GO:0004000"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"tRNA-specific adenosine deaminase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782336","Reactome:R-HSA-6782311"],"synonyms":[{"name":"tRNA-adenosine deaminase activity","type":"exact"}],"termid":"GO:0008251","terms_by_termid":{"GO:0043829":null,"GO:0052717":null}}


id: PBO:0018116
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukarotes only","termid":"PBO:0018116"}


id: PBO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 1","termid":"PBO:0051978"}


id: PBO:0054599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2003","termid":"PBO:0054599"}


id: PBO:0055262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2689","termid":"PBO:0055262"}


id: PATO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of not being clearly visible.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conspicuousness","termid":"PATO:0001998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inconspicuous","synonyms":[{"name":"faint","type":"related"}],"termid":"PATO:0000464"}


id: PBO:0072008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 10","termid":"PBO:0072008"}


id: GO:0048525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"negatively_regulates","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral process","synonyms":[{"name":"down regulation of viral life cycle","type":"narrow"},{"name":"down-regulation of viral life cycle","type":"narrow"},{"name":"downregulation of viral life cycle","type":"narrow"},{"name":"inhibition of viral life cycle","type":"narrow"},{"name":"negative regulation of viral life cycle","type":"narrow"},{"name":"negative regulation of viral reproduction","type":"narrow"}],"termid":"GO:0048525"}


id: GO:0106322
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98728],"is_not":false,"summary":null,"term":"GO:0106322"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["RHEA:19985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(hydroxymethyl)glutathione dehydrogenase activity","termid":"GO:0051903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase NAD activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.1.284"],"termid":"GO:0106322","terms_by_termid":{"GO:0106322":null}}


id: GO:0002344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which B cells produce antibodies with increased antigen affinity. This is accomplished by somatic hypermutation and selection for B cells which produce higher affinity antibodies to antigen.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral B cell selection","termid":"GO:0002343"},{"relation_name":"part_of","term_name":"immunoglobulin production involved in immunoglobulin-mediated immune response","termid":"GO:0002381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"B cell affinity maturation","synonyms":[{"name":"B lymphocyte affinity maturation","type":"exact"},{"name":"B-cell affinity maturation","type":"exact"},{"name":"B-lymphocyte affinity maturation","type":"exact"}],"termid":"GO:0002344"}


id: PBO:0017818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Prp19","termid":"PBO:0017818"}


id: PBO:0045745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 2","termid":"PBO:0045745"}


id: FYPO:0001368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"},{"relation_name":"is_a","term_name":"normal cytokinesis","termid":"FYPO:0001367"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal actomyosin contractile ring assembly","synonyms":[{"name":"normal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"normal actomyosin contractile ring formation","type":"related"},{"name":"normal contractile ring assembly","type":"exact"},{"name":"normal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"normal cytokinetic contractile ring assembly","type":"exact"},{"name":"normal cytokinetic ring assembly","type":"related"},{"name":"normal cytokinetic ring formation","type":"related"},{"name":"normal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0001368"}


id: PBO:0082372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication","termid":"PBO:0082372"}


id: GO:1900465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular arginine catabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:19233144","GOC:TermGenie","PMID:8455631"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900465)","synonyms":[{"name":"negative regulation of arginine breakdown by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of arginine catabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of arginine degradation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900465"}


id: PBO:0057018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 106a","termid":"PBO:0057018"}


id: PBO:0047246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member B","termid":"PBO:0047246"}


id: GO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allose metabolic process","termid":"GO:0019313"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"allose biosynthetic process","synonyms":[{"name":"allose anabolism","type":"exact"},{"name":"allose biosynthesis","type":"exact"},{"name":"allose formation","type":"exact"},{"name":"allose synthesis","type":"exact"}],"termid":"GO:0046366"}


id: SO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002198"}


id: GO:0007117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bud portion of a cell that reproduces by budding irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"},{"relation_name":"part_of","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell bud growth","synonyms":[{"name":"bud growth","type":"broad"}],"termid":"GO:0007117"}


id: GO:0062154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + H2O + N6-methyl-AMP = IMP + methylamine. Can also use N6-methyl-dAMP as a substrate.","definition_xrefs":["PMID:29884623","RHEA:16001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N6-methyl-AMP deaminase activity","secondary_identifiers":["Reactome:R-HSA-9731661","Reactome:R-HSA-2161187","Reactome:R-HSA-2161195"],"synonyms":[{"name":"MAPDA","type":"exact"},{"name":"N6-mAMP deaminase activity","type":"exact"},{"name":"N6-methyl-AMP/dAMP aminohydrolase","type":"exact"}],"termid":"GO:0062154"}


id: GO:1905559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic nuclear envelope disassembly","termid":"GO:1905557"},{"relation_name":"positively_regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic nuclear envelope disassembly","synonyms":[{"name":"activation of mitotic nuclear envelope breakdown","type":"narrow"},{"name":"activation of mitotic nuclear envelope catabolism","type":"narrow"},{"name":"activation of mitotic nuclear envelope degradation","type":"narrow"},{"name":"activation of mitotic nuclear envelope disassembly","type":"narrow"},{"name":"positive regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"positive regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"positive regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"up regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"up regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"upregulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"upregulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"upregulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"upregulation of mitotic nuclear envelope disassembly","type":"exact"}],"termid":"GO:1905559"}


id: PBO:0004462
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accumulation of Condensin at RDNA","termid":"PBO:0004462"}


id: PBO:0005716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase Fmn1","termid":"PBO:0005716"}


id: PBO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 77","termid":"PBO:0042020"}


id: PBO:0090909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc transferase associated protein Alg14","termid":"PBO:0090909"}


id: GO:0060155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet dense granule. A platelet dense granule is an electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins.","definition_xrefs":["GOC:dph","PMID:11487378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet dense granule organization","synonyms":[{"name":"bull's eye body organization and biogenesis","type":"related"},{"name":"platelet dense body organization and biogenesis","type":"related"},{"name":"platelet dense granule organisation","type":"exact"},{"name":"platelet dense granule organization and biogenesis","type":"related"}],"termid":"GO:0060155"}


id: GO:0050581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mannitol + O2 = mannose + H2O2.","definition_xrefs":["MetaCyc:1.1.3.40-RXN","EC:1.1.3.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-mannitol oxidase activity","secondary_identifiers":["RHEA:18513"],"synonyms":[{"name":"D-arabinitol oxidase activity","type":"related"},{"name":"D-arabitol oxidase activity","type":"related"},{"name":"mannitol oxidase activity","type":"related"},{"name":"mannitol:oxygen oxidoreductase (cyclizing)","type":"related"}],"termid":"GO:0050581"}


id: PR:Q9UT86
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.03","secondary_identifiers":["UniProtKB:Q9UT86"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC343.03","type":"related"},{"name":"Spom972h-ANAPC11","type":"exact"}],"termid":"PR:Q9UT86"}


id: GO:2000260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation, common pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"blood coagulation, common pathway","termid":"GO:0072377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"regulation of blood coagulation, common pathway","termid":"GO:2000260"}


id: PBO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin, GTPase activator Tsc2","termid":"PBO:0036236"}


id: PBO:0047488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin-fold anticodon binding domain containing 1","termid":"PBO:0047488"}


id: GO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-mediated vasodilation","secondary_identifiers":["GO:0003125","GO:0003126"],"synonyms":[{"name":"regulation of vasodilation by circulating noradrenaline","type":"related"},{"name":"regulation of vasodilation by circulating norepinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal noradrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal norepinephrine","type":"related"},{"name":"regulation of vasodilation by noradrenaline","type":"related"},{"name":"regulation of vasodilation by norepinephrine","type":"related"}],"termid":"GO:0003122"}


id: PBO:0040647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 2A","termid":"PBO:0040647"}


id: PBO:0071427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 33","termid":"PBO:0071427"}


id: PBO:0056401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPT antisense RNA 1","termid":"PBO:0056401"}


id: GO:0102787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin 3-O-beta-D-caffeoylglucoside + coenzyme A.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"caffeoyl-CoA:pelargonidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7997"],"termid":"GO:0102787"}


id: PBO:0058997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX pseudogene 1","termid":"PBO:0058997"}


id: GO:0090417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-methylnicotinate from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"N-methylnicotinate transmembrane transporter activity","synonyms":[{"name":"N-methylnicotinate transporter activity","type":"related"}],"termid":"GO:0090417"}


id: GO:0018444
data:
  {"annotated_genes":["SJAG_01696","SJAG_00338"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71829,73162],"is_not":false,"summary":null,"term":"GO:0018444"}]},"cv_name":"cellular_component","definition":"A heterodimeric complex involved in the release of a nascent polypeptide chain from a ribosome.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00338":null,"SJAG_01696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"translation release factor complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"eukaryotic peptide chain release factor","type":"exact"},{"name":"peptide chain release factor","type":"broad"}],"termid":"GO:0018444","terms_by_termid":{"GO:0018444":null}}


id: PBO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome","termid":"PBO:0000327"}


id: GO:0042562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an hormone, a naturally occurring substance secreted by specialized cells that affect the metabolism or behavior of cells possessing functional receptors for the hormone. Hormones may be produced by the same, or different, cell as express the receptor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hormone binding","termid":"GO:0042562"}


id: GO:0030759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,6-tetrahydroxy-3,7-dimethoxyflavone + S-adenosyl-L-methionine(1+) = 3',4',5-trihydroxy-3,6,7-trimethoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.84","RHEA:18717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"methylquercetagetin 6-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04505","MetaCyc:2.1.1.84-RXN"],"synonyms":[{"name":"6-OMT","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5,6-tetrahydroxy-3,7-dimethoxyflavone 6-O-methyltransferase activity","type":"related"},{"name":"flavonol 6-O-methyltransferase activity","type":"related"},{"name":"flavonol 6-methyltransferase activity","type":"related"}],"termid":"GO:0030759"}


id: GO:0080132
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71706],"is_not":false,"summary":null,"term":"GO:0080132"}]},"cv_name":"molecular_function","definition":"Catalysis of the conversion of a fatty acid to an alpha-hydroxylated fatty acid. A hydroxyl group is added to the second carbon, counted from the carboxyl end, of a fatty acid chain.","definition_xrefs":["PMID:19054355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fatty acid alpha-hydroxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5693761"],"synonyms":[{"name":"fatty acid 2-hydroxylase","type":"exact"}],"termid":"GO:0080132","terms_by_termid":{"GO:0080132":null}}


id: PBO:0077377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 119","termid":"PBO:0077377"}


id: PBO:0016113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin involved in G1","termid":"PBO:0016113"}


id: PBO:0075959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein","termid":"PBO:0075959"}


id: GO:0010062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that suppresses trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"negative regulation of plant epidermal cell differentiation","termid":"GO:1903889"},{"relation_name":"negatively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trichoblast fate specification","synonyms":[{"name":"down regulation of trichoblast fate","type":"exact"},{"name":"down-regulation of trichoblast fate","type":"exact"},{"name":"downregulation of trichoblast fate","type":"exact"},{"name":"inhibition of trichoblast fate","type":"narrow"}],"termid":"GO:0010062"}


id: PR:Q09882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNW domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12096:SF0","PRO:DNx","OMA:SCHPO04706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.11","secondary_identifiers":["UniProtKB:Q09882"],"synonyms":[{"name":"Spom972h-SNW1","type":"exact"},{"name":"complexed with cdc5 protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcriptional coregulator snw1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09882"}


id: MOD:01770
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-palmitoyl-L-threonine amide.","definition_xrefs":["PubMed:8413602","RESID:AA0079#var","RESID:AA0097#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"O-palmitoyl-L-threonine","termid":"MOD:00088"},{"relation_name":"has_functional_parent","term_name":"L-threonine amide","termid":"MOD:00106"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoyl-L-threonine amide","synonyms":[{"name":"(2S,3R)-2-amino-3-(hexadecanoyloxy)butanamide","type":"exact"},{"name":"OPamThrN","type":"exact"}],"termid":"MOD:01770"}


id: RO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a branching part of y if and only if x is part of y and x is connected directly or indirectly to the main stem of y","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branching_part_of","termid":"RO:0002380"}


id: GO:0003384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell, contributing to the process of gastrulation.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical constriction","termid":"GO:0003383"},{"relation_name":"part_of","term_name":"epithelial cell morphogenesis involved in gastrulation","termid":"GO:0003381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction involved in gastrulation","termid":"GO:0003384"}


id: FYPO:0005296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:18045993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during mitotic S phase","synonyms":[{"name":"increased number of Rad22 foci during mitotic S phase","type":"exact"},{"name":"increased number of Rad52 foci during S phase of mitotic cell cycle","type":"exact"},{"name":"increased number of Rad52 foci during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005296"}


id: PBO:0069828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1114, pseudogene","termid":"PBO:0069828"}


id: GO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of floral organs. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["PO:0025395","GOC:PO_curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"flower structural organization","termid":"GO:0048461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ structural organization","secondary_identifiers":["GO:0048435"],"synonyms":[{"name":"floral organ structural organisation","type":"exact"}],"termid":"GO:0048450"}


id: GO:1903018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycoprotein metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:23544079","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glycoprotein metabolic process","synonyms":[{"name":"regulation of glycoprotein metabolism","type":"exact"}],"termid":"GO:1903018"}


id: PR:Q9HDZ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C589.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.06c","synonyms":[{"name":"Spom972h-SPAC589.06c","type":"exact"}],"termid":"PR:Q9HDZ8"}


id: FYECO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature, transferred to standard, and then to high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-step temperature shift, low to standard, standard to high","termid":"FYECO:0000295"}


id: PBO:0004145
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during nucleotide depletion","termid":"PBO:0004145"}


id: PBO:0074921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 90","termid":"PBO:0074921"}


id: PBO:0074045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 27","termid":"PBO:0074045"}


id: GO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via macropinocytosis.","definition_xrefs":["PMID:16556257","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following macropinocytosis","termid":"GO:0002750"}


id: GO:0018873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide.","definition_xrefs":["UM-BBD_pathwayID:atr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine metabolic process","synonyms":[{"name":"atrazine metabolism","type":"exact"}],"termid":"GO:0018873"}


id: GO:0019122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of peptidyl-D-alanine, by either racemization or from peptidyl-L-serine.","definition_xrefs":["RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-D-alanine racemization","synonyms":[{"name":"alanine racemization","type":"broad"}],"termid":"GO:0019122"}


id: PBO:0030521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030521"}


id: GO:0046715
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106080],"is_not":false,"summary":null,"term":"GO:0046715"}]},"cv_name":"molecular_function","definition":"Enables the transport of borate across a membrane against the concentration gradient.","definition_xrefs":["PMID:12447444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"active borate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0080138"],"synonyms":[{"name":"borate transmembrane transporter activity","type":"broad"},{"name":"borate uptake transmembrane transporter activity","type":"related"},{"name":"boron transmembrane transporter activity","type":"related"},{"name":"boron uptake transmembrane transporter activity","type":"related"},{"name":"efflux-type borate transporter","type":"narrow"},{"name":"efflux-type boron transporter","type":"related"}],"termid":"GO:0046715","terms_by_termid":{"GO:0046715":null}}


id: FYECO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which doxorubicin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ doxorubicin","synonyms":[{"name":"+ 14-hydroxydaunomycin ","type":"related"},{"name":"+ 14-hydroxydaunorubicine ","type":"related"},{"name":"+ adriamycin","type":"related"}],"termid":"FYECO:0000308"}


id: PBO:0029588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_binding","termid":"PBO:0029588"}


id: FYPO:0006937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which lipid binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"abnormal lipid binding","termid":"FYPO:0007250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished lipid binding","synonyms":[{"name":"lipid binding abolished","type":"exact"}],"termid":"FYPO:0006937"}


id: FYPO:0000776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"},{"relation_name":"is_a","term_name":"normal protein phosphorylation","termid":"FYPO:0004422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during vegetative growth","synonyms":[{"name":"normal protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000776"}


id: GO:1904320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle contraction involved in micturition.","definition_xrefs":["PMID:18562635","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction involved in micturition","termid":"GO:1904318"},{"relation_name":"positively_regulates","term_name":"smooth muscle contraction involved in micturition","termid":"GO:0060083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of smooth muscle contraction involved in micturition","synonyms":[{"name":"activation of smooth muscle contraction involved in micturition","type":"narrow"},{"name":"activation of smooth muscle contraction involved in urination","type":"related"},{"name":"activation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"positive regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"positive regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"up regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"up regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"up regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"up-regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"up-regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"up-regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"upregulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"upregulation of smooth muscle contraction involved in urination","type":"related"},{"name":"upregulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"}],"termid":"GO:1904320"}


id: PBO:0052122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 intronic transcript 1","termid":"PBO:0052122"}


id: PBO:0035712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_methyltransferase_activity","termid":"PBO:0035712"}


id: PBO:0004372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Sep1","termid":"PBO:0004372"}


id: GO:0032934
data:
  {"annotated_genes":["SJAG_01590","SJAG_04018","SJAG_02323","SJAG_00054","SJAG_03718","SJAG_01722","SJAG_02375","SJAG_00355","SJAG_01329","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75776,85917,96953,104998],"is_not":false,"summary":null,"term":"GO:0032934"},{"annotations":[111255,103386,70820,89647,71822,106438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"}]},"cv_name":"molecular_function","definition":"Binding to a sterol, a steroid containing a hydroxy group in the 3 position, closely related to cholestan-3-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"sterol binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005498"],"synonyms":[{"name":"sterol carrier activity","type":"related"}],"termid":"GO:0032934","terms_by_termid":{"GO:0008142":null,"GO:0032934":null}}


id: GO:0071755
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgM immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","PMID:20176268","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgM immunoglobulin complex","termid":"GO:0071753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"IgM B cell receptor complex","synonyms":[{"name":"membrane-bound IgM","type":"narrow"},{"name":"surface IgM","type":"narrow"}],"termid":"GO:0071755"}


id: PBO:0067310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 396, pseudogene","termid":"PBO:0067310"}


id: PBO:0082825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved peptide N-glycanase; deglycosylating enzyme that cleaves N-glycans that are attached to misfolded ERAD substrate glycoproteins prior to proteasome-dependent degradation; localizes to the cytoplasm and nucleus; activity is enhanced by interaction with Rad23p; human ortholog NGLY1 is associated with a syndrome characterized by developmental delays, epilepsy, absence of tears and liver disease","termid":"PBO:0082825"}


id: PBO:0074610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14B","termid":"PBO:0074610"}


id: PBO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: GO:0048927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast support cell differentiation","termid":"GO:0048927"}


id: PBO:0040812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like cargo adaptor 1","termid":"PBO:0040812"}


id: PBO:0033764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_eukaryotic_translation_initiation_factor_2B_complex_assembly","termid":"PBO:0033764"}


id: GO:0090158
data:
  {"annotated_genes":["SJAG_03812","SJAG_03795","SJAG_05289","SJAG_00906","SJAG_02595","SJAG_03558","SJAG_02763","SJAG_00053","SJAG_01460","SJAG_03170","SJAG_02683","SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71505,85905,89086,103898,107804,114293],"is_not":false,"summary":null,"term":"GO:0090158"},{"annotations":[76975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[110022,113534,98704,103734,103811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990809"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an endoplasmic reticulum membrane.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00906":null,"SJAG_01460":null,"SJAG_01848":null,"SJAG_02595":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_03170":null,"SJAG_03558":null,"SJAG_03795":null,"SJAG_03812":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum membrane organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26774782":null},"synonyms":[{"name":"endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090158","terms_by_termid":{"GO:0016320":null,"GO:0090158":null,"GO:1990809":null}}


id: FYPO:0007651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abolished during mitosis.","definition_xrefs":["PMID:14730319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during mitosis","synonyms":[{"name":"abolished protein localization to centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to nuclear centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic M phase","type":"related"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007651"}


id: GO:0002657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction dependent upon immune response","termid":"GO:0002654"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"},{"relation_name":"positively_regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction to nonself antigen","synonyms":[{"name":"activation of tolerance induction to nonself antigen","type":"narrow"},{"name":"stimulation of tolerance induction to nonself antigen","type":"narrow"},{"name":"up regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"up-regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"upregulation of tolerance induction to nonself antigen","type":"exact"}],"termid":"GO:0002657"}


id: PBO:0004305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family 6","termid":"PBO:0004305"}


id: PBO:0083834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); non-essential gene; interacts with Rpn4p; protein abundance increases in response to DNA replication stress; ortholog of human p27","termid":"PBO:0083834"}


id: GO:0097118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process involved in assembly of the postsynaptic membrane in which neuroligins are localized to distinct domains in the cell membrane. Neuroligins are neuronal cell surface proteins on the postsynaptic membrane that mediate synapse formation between neurons.","definition_xrefs":["PMID:12796785","GOC:BHF","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"postsynaptic membrane assembly","termid":"GO:0097104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"neuroligin clustering involved in postsynaptic membrane assembly","synonyms":[{"name":"Nlgn clustering","type":"broad"},{"name":"neuroligin clustering","type":"broad"},{"name":"postsynaptic neuroligin clustering","type":"exact"}],"termid":"GO:0097118"}


id: GO:1904881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen sulfide stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24012591","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to hydrogen sulfide","termid":"GO:1904880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydrogen sulfide","synonyms":[{"name":"cellular response to dihydridosulfur","type":"exact"},{"name":"cellular response to sulfane","type":"exact"}],"termid":"GO:1904881"}


id: GO:1902086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumagillin.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fumagillin biosynthetic process","synonyms":[{"name":"fumagillin anabolism","type":"exact"},{"name":"fumagillin biosynthesis","type":"exact"},{"name":"fumagillin formation","type":"exact"},{"name":"fumagillin synthesis","type":"exact"}],"termid":"GO:1902086"}


id: FYPO:0002500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein palmitoylation","synonyms":[{"name":"normal protein/peptide palmitoylation","type":"exact"}],"termid":"FYPO:0002500"}


id: PBO:0090725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase","termid":"PBO:0090725"}


id: PBO:0072681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 2","termid":"PBO:0072681"}


id: PR:C6Y4A3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit K, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.10c","synonyms":[{"name":"Spom972h-atp19","type":"exact"}],"termid":"PR:C6Y4A3"}


id: PBO:0087528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4, an essential histone acetyltransferase complex; positions Piccolo NuA4 for efficient acetylation of histone H4 or histone H2A; relocalizes to the cytosol in response to hypoxia; similar to human tumor suppressor ING1 and its isoforms ING4 and ING5","termid":"PBO:0087528"}


id: PBO:0068191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 498","termid":"PBO:0068191"}


id: GO:0042641
data:
  {"annotated_genes":["SJAG_01739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"Any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actomyosin","references_by_uniquename":{"GO_REF:0000044":null},"synonyms":[{"name":"actomyosin complex","type":"exact"},{"name":"actomyosin structure","type":"exact"}],"termid":"GO:0042641","terms_by_termid":{"GO:0001725":null}}


id: PBO:0031139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_myosin_filament_organization","termid":"PBO:0031139"}


id: FYPO:0006919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitotic interphase","synonyms":[{"name":"normal protein localisation to nucleus during mitotic interphase","type":"exact"},{"name":"normal protein localization to nucleus during interphase of mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006919"}


id: PBO:0045175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A3","termid":"PBO:0045175"}


id: GO:1901347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell wall organization or biogenesis","termid":"GO:1903339"},{"relation_name":"is_a","term_name":"regulation of secondary cell wall biogenesis","termid":"GO:2000652"},{"relation_name":"negatively_regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"negative regulation of secondary cell wall biogenesis","synonyms":[{"name":"down regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of secondary cell wall anabolism","type":"broad"},{"name":"down regulation of secondary cell wall biogenesis","type":"exact"},{"name":"down regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"down regulation of secondary cell wall formation","type":"broad"},{"name":"down regulation of secondary cell wall synthesis","type":"broad"},{"name":"down-regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of secondary cell wall anabolism","type":"broad"},{"name":"down-regulation of secondary cell wall biogenesis","type":"exact"},{"name":"down-regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"down-regulation of secondary cell wall formation","type":"broad"},{"name":"down-regulation of secondary cell wall synthesis","type":"broad"},{"name":"downregulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of secondary cell wall anabolism","type":"broad"},{"name":"downregulation of secondary cell wall biogenesis","type":"exact"},{"name":"downregulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"downregulation of secondary cell wall formation","type":"broad"},{"name":"downregulation of secondary cell wall synthesis","type":"broad"},{"name":"inhibition of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"inhibition of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"inhibition of secondary cell wall anabolism","type":"broad"},{"name":"inhibition of secondary cell wall biogenesis","type":"narrow"},{"name":"inhibition of secondary cell wall biosynthetic process","type":"broad"},{"name":"inhibition of secondary cell wall formation","type":"broad"},{"name":"inhibition of secondary cell wall synthesis","type":"broad"},{"name":"negative regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"negative regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"negative regulation of secondary cell wall anabolism","type":"broad"},{"name":"negative regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"negative regulation of secondary cell wall formation","type":"broad"},{"name":"negative regulation of secondary cell wall synthesis","type":"broad"}],"termid":"GO:1901347"}


id: PBO:0091162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ReqQ-type subtelomeric helicase fragment","termid":"PBO:0091162"}


id: PBO:0083167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF PAD1/YDR538W","termid":"PBO:0083167"}


id: GO:0042904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 9-cis-retinoic acid, a metabolically active vitamin A derivative.","definition_xrefs":["PMID:11279029","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid biosynthetic process","termid":"GO:0002138"},{"relation_name":"is_a","term_name":"9-cis-retinoic acid metabolic process","termid":"GO:0042905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"9-cis-retinoic acid biosynthetic process","synonyms":[{"name":"9-cis-retinoic acid anabolism","type":"exact"},{"name":"9-cis-retinoic acid biosynthesis","type":"exact"},{"name":"9-cis-retinoic acid formation","type":"exact"},{"name":"9-cis-retinoic acid synthesis","type":"exact"}],"termid":"GO:0042904"}


id: PBO:0091023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type homeobox protein Pi","termid":"PBO:0091023"}


id: PBO:0029319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat","termid":"PBO:0029319"}


id: PBO:0060695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 3","termid":"PBO:0060695"}


id: GO:0009293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of horizontal gene transfer in which genetic material is introduced into a cell mediated by a virus.","definition_xrefs":["PMID:18265289","PMID:33597173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transduction","secondary_identifiers":["Wikipedia:Transduction_(genetics)"],"termid":"GO:0009293"}


id: PBO:0003347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI domain","termid":"PBO:0003347"}


id: FYPO:0001973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear division, cytokinesis and subsequent cell separation are abnormal, resulting in the formation of a cell in which an undivided mass of DNA is located on one side of the septum. The septum does not degrade.","definition_xrefs":["PMID:3283148","PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell separation after cytokinesis, with abnormal nuclear division (obsolete FYPO:0001973)","synonyms":[{"name":"abnormal cell separation after cytokinesis, with abnormal nuclear division during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis, with abnormal nuclear division during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation, with abnormal nuclear division","type":"exact"}],"termid":"FYPO:0001973"}


id: PBO:0040942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 13","termid":"PBO:0040942"}


id: GO:1904734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of electron transfer activity.","definition_xrefs":["GOC:TermGenie","PMID:25416781","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of electron transfer activity","termid":"GO:1904732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of electron transfer activity","synonyms":[{"name":"activation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"activation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"activation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"activation of amicyanin","type":"narrow"},{"name":"activation of azurin","type":"narrow"},{"name":"activation of bacterial-type ferredoxin","type":"narrow"},{"name":"activation of chloroplast-type ferredoxin","type":"narrow"},{"name":"activation of copper electron carrier","type":"narrow"},{"name":"activation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of electron acceptor activity","type":"narrow"},{"name":"activation of electron carrier activity","type":"narrow"},{"name":"activation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"activation of electron donor activity","type":"narrow"},{"name":"activation of electron transfer flavoprotein","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"activation of electron transporter activity","type":"narrow"},{"name":"activation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"activation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"activation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of mononuclear iron electron carrier","type":"narrow"},{"name":"activation of polyferredoxin","type":"narrow"},{"name":"activation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"activation of rubredoxin","type":"narrow"},{"name":"activation of small blue copper electron carrier","type":"narrow"},{"name":"activation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"positive regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"positive regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"positive regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"positive regulation of amicyanin","type":"narrow"},{"name":"positive regulation of azurin","type":"narrow"},{"name":"positive regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"positive regulation of copper electron carrier","type":"narrow"},{"name":"positive regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of electron acceptor activity","type":"narrow"},{"name":"positive regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"positive regulation of electron donor activity","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"positive regulation of electron transporter activity","type":"related"},{"name":"positive regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"positive regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"positive regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"positive regulation of polyferredoxin","type":"narrow"},{"name":"positive regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"positive regulation of rubredoxin","type":"narrow"},{"name":"positive regulation of small blue copper electron carrier","type":"narrow"},{"name":"positive regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up regulation of amicyanin","type":"narrow"},{"name":"up regulation of azurin","type":"narrow"},{"name":"up regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up regulation of copper electron carrier","type":"narrow"},{"name":"up regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of electron acceptor activity","type":"narrow"},{"name":"up regulation of electron carrier activity","type":"related"},{"name":"up regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up regulation of electron donor activity","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up regulation of electron transporter activity","type":"related"},{"name":"up regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up regulation of polyferredoxin","type":"narrow"},{"name":"up regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up regulation of rubredoxin","type":"narrow"},{"name":"up regulation of small blue copper electron carrier","type":"narrow"},{"name":"up regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up-regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up-regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up-regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up-regulation of amicyanin","type":"narrow"},{"name":"up-regulation of azurin","type":"narrow"},{"name":"up-regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up-regulation of copper electron carrier","type":"narrow"},{"name":"up-regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of electron acceptor activity","type":"narrow"},{"name":"up-regulation of electron carrier activity","type":"related"},{"name":"up-regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up-regulation of electron donor activity","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up-regulation of electron transporter activity","type":"related"},{"name":"up-regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up-regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up-regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up-regulation of polyferredoxin","type":"narrow"},{"name":"up-regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up-regulation of rubredoxin","type":"narrow"},{"name":"up-regulation of small blue copper electron carrier","type":"narrow"},{"name":"up-regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"upregulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"upregulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"upregulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"upregulation of amicyanin","type":"narrow"},{"name":"upregulation of azurin","type":"narrow"},{"name":"upregulation of bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"upregulation of copper electron carrier","type":"narrow"},{"name":"upregulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of electron acceptor activity","type":"narrow"},{"name":"upregulation of electron carrier activity","type":"related"},{"name":"upregulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"upregulation of electron donor activity","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"upregulation of electron transporter activity","type":"related"},{"name":"upregulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"upregulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"upregulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of mononuclear iron electron carrier","type":"narrow"},{"name":"upregulation of polyferredoxin","type":"narrow"},{"name":"upregulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"upregulation of rubredoxin","type":"narrow"},{"name":"upregulation of small blue copper electron carrier","type":"narrow"},{"name":"upregulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904734"}


id: GO:2000992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of galactomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of galactomannan catabolic process","termid":"GO:2000991"},{"relation_name":"negatively_regulates","term_name":"galactomannan catabolic process","termid":"GO:0051682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of galactomannan catabolic process","termid":"GO:2000992"}


id: PBO:0002596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rhp41","termid":"PBO:0002596"}


id: GO:0098670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface that mediates/triggers viral entry by endocytosis/pinocytosis or by inducing fusion/penetration.","definition_xrefs":["PMID:18351291","VZ:3942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry receptor-mediated virion attachment to host cell","synonyms":[{"name":"viral attachment to host entry receptor","type":"exact"}],"termid":"GO:0098670"}


id: PBO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation","termid":"PBO:0036126"}


id: PBO:0016584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in chromatin silencing by small RNA, Snd1","termid":"PBO:0016584"}


id: PBO:0070266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 1","termid":"PBO:0070266"}


id: GO:1903726
data:
  {"annotated_genes":["SJAG_01187","SJAG_03940","SJAG_02380","SJAG_01906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110504,106480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[107833,104879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10657240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"negatively_regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of phospholipid metabolic process","type":"exact"},{"name":"down regulation of phospholipid metabolism","type":"exact"},{"name":"down-regulation of phospholipid metabolic process","type":"exact"},{"name":"down-regulation of phospholipid metabolism","type":"exact"},{"name":"downregulation of phospholipid metabolic process","type":"exact"},{"name":"downregulation of phospholipid metabolism","type":"exact"},{"name":"inhibition of phospholipid metabolic process","type":"narrow"},{"name":"inhibition of phospholipid metabolism","type":"narrow"},{"name":"negative regulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903726","terms_by_termid":{"GO:0071072":null,"GO:2001211":null}}


id: PBO:0088839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog4","termid":"PBO:0088839"}


id: PBO:0036340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase Dal2","termid":"PBO:0036340"}


id: GO:0010012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-campestanaol + O2 = 6-deoxocathasterone + H2O.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"steroid 22-alpha hydroxylase activity","termid":"GO:0010012"}


id: PBO:0002800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Ytm1 (predicted)","termid":"PBO:0002800"}


id: PBO:0026693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caesium","termid":"PBO:0026693"}


id: PBO:0013446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4","termid":"PBO:0013446"}


id: PBO:0053577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 598","termid":"PBO:0053577"}


id: PBO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulphur cluster biogenesis protein (predicted)","termid":"PBO:0002440"}


id: GO:0032722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"positively_regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine production","secondary_identifiers":["GO:0045080","GO:0090197"],"synonyms":[{"name":"activation of chemokine production","type":"narrow"},{"name":"positive regulation of chemokine biosynthetic process","type":"narrow"},{"name":"positive regulation of chemokine secretion","type":"narrow"},{"name":"stimulation of chemokine production","type":"narrow"},{"name":"up regulation of chemokine production","type":"exact"},{"name":"up-regulation of chemokine production","type":"exact"},{"name":"upregulation of chemokine production","type":"exact"}],"termid":"GO:0032722"}


id: GO:0160147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(38/39/40) in tRNA = pseudouridine(38/39/40) in tRNA.","definition_xrefs":["EC:5.4.99.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0140101","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA pseudouridine(38-40) synthase activity","secondary_identifiers":["MetaCyc:TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN","RHEA:22376"],"synonyms":[{"name":"PSUI activity","type":"exact"},{"name":"tRNA pseudouridylate synthase","type":"exact"}],"termid":"GO:0160147"}


id: GO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.","definition_xrefs":["PMID:11238902","GOC:pde","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0140097","GO:0016788"],"is_obsolete":false,"name":"phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:0090580"}


id: PBO:0049232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 5","termid":"PBO:0049232"}


id: FYPO:0004987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sunitinib. Cells stop growing (and may die) at a concentration of sunitinib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sunitinib","synonyms":[{"name":"hypersensitive to sunitinib","type":"exact"},{"name":"sensitive to sunitinib during mitotic cell cycle","type":"related"},{"name":"sensitive to sunitinib during vegetative growth","type":"exact"}],"termid":"FYPO:0004987"}


id: PBO:0050273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 3 pseudogene 1","termid":"PBO:0050273"}


id: PBO:0072901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cancer cell invasion","termid":"PBO:0072901"}


id: PR:O94534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp14 gene.","definition_xrefs":["UniProtKB:O94534","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.07","synonyms":[{"name":"Spom972h-alp14","type":"exact"},{"name":"altered polarity protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94534"}


id: PBO:0055004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2419","termid":"PBO:0055004"}


id: GO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming capable of differentiating autonomously into an endoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"endodermal cell fate commitment","termid":"GO:0001711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell fate specification","synonyms":[{"name":"endoderm cell fate specification","type":"exact"}],"termid":"GO:0001714"}


id: FYECO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000164 anti-tubulin antibodies added (obsolete FYECO:0000164)","synonyms":[{"name":"anti-tubulin antibody added","type":"exact"}],"termid":"FYECO:0000164"}


id: FYPO:0004679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated 25S rRNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"polyadenylated 25S rRNA absent from cell","synonyms":[{"name":"polyadenylated 25S rRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"polyadenylated 25S rRNA absent from cell during vegetative growth","type":"exact"},{"name":"polyadenylated 25S rRNA transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable polyadenylated 25S rRNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004679"}


id: GO:1900682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octadecene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"octadecene metabolic process","termid":"GO:1900681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"octadecene biosynthetic process","synonyms":[{"name":"1-octadecene biosynthetic process","type":"exact"},{"name":"octadecene anabolism","type":"exact"},{"name":"octadecene biosynthesis","type":"exact"},{"name":"octadecene formation","type":"exact"},{"name":"octadecene synthesis","type":"exact"}],"termid":"GO:1900682"}


id: PBO:0029873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4_acetylation","termid":"PBO:0029873"}


id: FYPO:0006556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is elongated, has four nuclei and three septa, and the septa are not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei","termid":"FYPO:0001253"},{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"elongated tetranucleate vegetative cell","termid":"FYPO:0004044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated tetranucleate triseptate vegetative cell, single septa between nuclei","synonyms":[{"name":"inviable elongated multiseptate vegetative cell, with four nuclei and single septa between nuclei","type":"exact"},{"name":"inviable elongated tetranucleate triseptate cell, single septa between nuclei during vegetative growth","type":"exact"},{"name":"inviable elongated tetranucleate triseptate vegetative cell, single septa between nuclei during mitotic cell cycle","type":"related"},{"name":"lethal; elongated tetranucleate triseptate vegetative cell, single septa between nuclei","type":"exact"}],"termid":"FYPO:0006556"}


id: PBO:0017921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD transmembrane transporter (predicted)","termid":"PBO:0017921"}


id: GO:0097563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["ISBN:9780124260207","PMID:16607022","GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left middle basal body pair","termid":"GO:0097563"}


id: PBO:0087209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which dimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 613 and methylates EF3 (Yef3p) at lysine 187; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; involved in regulation of translational termination; predicted involvement in ribosome biogenesis","termid":"PBO:0087209"}


id: PBO:0074982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-24","termid":"PBO:0074982"}


id: PBO:0065584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha","termid":"PBO:0065584"}


id: GO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bacteriocin, any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"bacteriocin metabolic process","termid":"GO:0046224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"bacteriocin biosynthetic process","synonyms":[{"name":"bacteriocin anabolism","type":"exact"},{"name":"bacteriocin biosynthesis","type":"exact"},{"name":"bacteriocin formation","type":"exact"},{"name":"bacteriocin synthesis","type":"exact"}],"termid":"GO:0030152"}


id: PBO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase Sry1","termid":"PBO:0015701"}


id: PBO:0071660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 1","termid":"PBO:0071660"}


id: PBO:0072160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 37","termid":"PBO:0072160"}


id: PBO:0041578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C21orf91 overlapping transcript 1","termid":"PBO:0041578"}


id: PBO:0069837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1123, pseudogene","termid":"PBO:0069837"}


id: FYPO:0000642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:mah","GO:0006325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromatin organization","synonyms":[{"name":"abnormal chromatin organisation","type":"exact"}],"termid":"FYPO:0000642"}


id: PBO:0049036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 25","termid":"PBO:0049036"}


id: GO:0035916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["PMID:20920515","GOC:fj","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of ion channel activity in another organism","termid":"GO:0044561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of calcium channel activity in another organism","synonyms":[{"name":"modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035916"}


id: GO:0097137
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAD-BCL-xl complex","termid":"GO:0097137"}


id: PBO:0070067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 24, pseudogene","termid":"PBO:0070067"}


id: GO:0019596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandelate metabolic process","termid":"GO:0018924"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"mandelate catabolic process","synonyms":[{"name":"mandelate breakdown","type":"exact"},{"name":"mandelate catabolism","type":"exact"},{"name":"mandelate degradation","type":"exact"}],"termid":"GO:0019596"}


id: PBO:0055638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3077","termid":"PBO:0055638"}


id: GO:0045898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"regulates","term_name":"RNA polymerase II preinitiation complex assembly","termid":"GO:0051123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0065003","GO:0008150","GO:0006355","GO:0044085"],"is_obsolete":false,"name":"regulation of RNA polymerase II transcription preinitiation complex assembly","synonyms":[{"name":"regulation of RNA polymerase II transcriptional pre-initiation complex assembly","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional pre-initiation complex biosynthesis","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional preinitiation complex formation","type":"related"}],"termid":"GO:0045898"}


id: PBO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (predicted)","termid":"PBO:0004492"}


id: FYPO:0007027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to medial cortex, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007027"}


id: GO:1902330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any synthesis of RNA primer that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synthesis of RNA primer involved in cell cycle DNA replication","termid":"GO:1902295"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"synthesis of RNA primer involved in bacterial-type DNA replication","synonyms":[{"name":"replication priming involved in bacterial-type DNA replication","type":"related"}],"termid":"GO:1902330"}


id: PR:O13970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01278","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.10c","secondary_identifiers":["UniProtKB:O13970"],"synonyms":[{"name":"Spom972h-rpsB","type":"exact"}],"termid":"PR:O13970"}


id: PBO:0085680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in prospore membrane morphogenesis; peripheral membrane protein that localizes to the prospore membrane and at numerous membrane contact sites; involved in sporulation, vacuolar protein sorting, prospore membrane formation during sporulation, and protein-Golgi retention; required for mitochondrial integrity; contains a PH-like domain; homologous to human CHAC and COH1 which are involved in Chorea-acanthocytosis and Cohen syndrome, respectively","termid":"PBO:0085680"}


id: PBO:0034164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_active_participant","termid":"PBO:0034164"}


id: PBO:0079954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP6 N-terminal like","termid":"PBO:0079954"}


id: PATO:0005001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in the bearer by virtue of the bearer having a variable number or count of an entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"amount","termid":"PATO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of count","synonyms":[{"name":"variable number","type":"related"}],"termid":"PATO:0005001"}


id: PBO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 19","termid":"PBO:0050202"}


id: GO:0000400
data:
  {"annotated_genes":["SJAG_02226","SJAG_02690","SJAG_04752","SJAG_02294","SJAG_02708","SJAG_02262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76690,77150,77914,90264,101278],"is_not":false,"summary":null,"term":"GO:0000400"},{"annotations":[74515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.","definition_xrefs":["GOC:krc","ISBN:0815332181","PMID:15563464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"four-way junction DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Holliday junction binding","type":"exact"},{"name":"forked DNA binding","type":"broad"}],"termid":"GO:0000400","terms_by_termid":{"GO:0000400":null,"GO:0000402":null}}


id: GO:0052553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism effects a change that affects the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"},{"relation_name":"is_a","term_name":"response to host immune response","termid":"GO:0052572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host immune response","secondary_identifiers":["GO:0052552"],"synonyms":[{"name":"modulation by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host immune response","type":"exact"},{"name":"perturbation of host immune response","type":"exact"}],"termid":"GO:0052553"}


id: PBO:0072109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 7","termid":"PBO:0072109"}


id: PBO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, Prp19 complex subunit Cdc5","termid":"PBO:0016053"}


id: PBO:0011525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis","termid":"PBO:0011525"}


id: GO:0033628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell adhesion mediated by integrin","synonyms":[{"name":"regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033628"}


id: PBO:0033820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic G1 APC coactivator Srw1/Ste9","termid":"PBO:0033820"}


id: PBO:0038775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T3","termid":"PBO:0038775"}


id: PBO:0049652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 6","termid":"PBO:0049652"}


id: PBO:0060422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 1","termid":"PBO:0060422"}


id: PBO:0077146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triokinase and FMN cyclase","termid":"PBO:0077146"}


id: GO:0046391
data:
  {"annotated_genes":["SJAG_03811","SJAG_04882","SJAG_04970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72035,73184,93053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006015"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5-phosphoribose 1-diphosphate, also known as 5-phosphoribosyl-1-pyrophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate metabolic process","termid":"GO:0019693"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-phosphoribose 1-diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PRPP-PWY"],"synonyms":[{"name":"5-phosphoribose 1-diphosphate metabolism","type":"exact"},{"name":"PRPP metabolic process","type":"exact"}],"termid":"GO:0046391","terms_by_termid":{"GO:0006015":null}}


id: PBO:0052497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 9","termid":"PBO:0052497"}


id: GO:0043814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phospho-(S)-lactate + GTP = lactyl-2-diphospho-5'-guanosine + diphosphate.","definition_xrefs":["RHEA:63424","PMID:18260642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phospholactate guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.68"],"termid":"GO:0043814"}


id: PBO:0065243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR15 divergent transcript","termid":"PBO:0065243"}


id: PBO:0039321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase, 12S type","termid":"PBO:0039321"}


id: GO:1904465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of matrix metallopeptidase secretion","termid":"GO:1904464"},{"relation_name":"negatively_regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of matrix metallopeptidase secretion","synonyms":[{"name":"down regulation of MMP secretion","type":"exact"},{"name":"down regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"down regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"down-regulation of MMP secretion","type":"exact"},{"name":"down-regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"down-regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"downregulation of MMP secretion","type":"exact"},{"name":"downregulation of matrix metallopeptidase secretion","type":"exact"},{"name":"downregulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"inhibition of MMP secretion","type":"narrow"},{"name":"inhibition of matrix metallopeptidase secretion","type":"narrow"},{"name":"inhibition of matrix metalloproteinase secretion","type":"narrow"},{"name":"negative regulation of MMP secretion","type":"exact"},{"name":"negative regulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904465"}


id: PBO:0073785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 5","termid":"PBO:0073785"}


id: PBO:0056693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis/spermiogenesis associated 1","termid":"PBO:0056693"}


id: PBO:0083078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dipeptidyl-peptidase III; cleaves dipeptides from the amino terminus of target proteins; highly active on synthetic substrate Arg-Arg-2-naphthylamide; mammalian ortholog may be a biomarker for some cancers","termid":"PBO:0083078"}


id: PBO:0025424
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair-deficiency disorders","termid":"PBO:0025424"}


id: PBO:0087567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein via interaction with TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair; colocalizes with quiescent cell telomere hyperclusters","termid":"PBO:0087567"}


id: GO:0046136
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108765,84567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"positive regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of vitamin metabolic process","type":"narrow"},{"name":"positive regulation of vitamin metabolism","type":"exact"},{"name":"stimulation of vitamin metabolic process","type":"narrow"},{"name":"up regulation of vitamin metabolic process","type":"exact"},{"name":"up-regulation of vitamin metabolic process","type":"exact"},{"name":"upregulation of vitamin metabolic process","type":"exact"}],"termid":"GO:0046136","terms_by_termid":{"GO:0090180":null}}


id: GO:0140372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of one or more ubiquitin groups.","definition_xrefs":["GOC:mah","PMID:31468675"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 ubiquitination (obsolete GO:0140372)","synonyms":[{"name":"histone H3 ubiquitylation","type":"exact"}],"termid":"GO:0140372"}


id: PBO:0072845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2","termid":"PBO:0072845"}


id: PBO:0030882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_vegetative_growth","termid":"PBO:0030882"}


id: PBO:0085947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; N-terminally propionylated in vivo; deletion mutant is viable","termid":"PBO:0085947"}


id: GO:0010618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to aerenchyma, parenchyma tissue containing particularly large intercellular spaces of schizogenous or lysigenous origin. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PO:0005702","PMID:18055613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerenchyma formation","termid":"GO:0010618"}


id: CHEBI:15361
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A 2-oxo monocarboxylic acid anion that is the conjugate base of pyruvic acid, arising from deprotonation of the carboxy group.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate","termid":"CHEBI:15361"}


id: GO:0035669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor 4 where the TRAM adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18297073","GOC:BHF","PMID:14556004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRAM-dependent toll-like receptor signaling pathway","termid":"GO:0035668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAM-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRAM-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRAM-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035669"}


id: GO:0043061
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89244,83440],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during meiosis II chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["PMID:10809666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic metaphase II chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043061","terms_by_termid":{"GO:0051456":null}}


id: FYPO:0007771
data:
  {"alleles_by_uniquename":{"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114238],"is_not":false,"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[114213,114214,114220,114221,114223,114224,114237,114239,114240,114241,114242,114243,114244],"is_not":false,"summary":null,"term":"FYPO:0007771"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is abnormally localized to one or more large clusters in the nuclear envelope. The protein may normally be distributed evenly in the nuclear envelope.","definition_xrefs":["PMID:32109380","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear envelope during vegetative growth","termid":"FYPO:0004885"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":7,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_05207"],"name":"abnormally clustered protein localization to nuclear envelope","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_03892","SJAG_04489","SJAG_03783"],"single_locus_genotype_uniquenames":["cmp7delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","did4delta","vps24delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta"],"synonyms":[{"name":"abnormal protein localization to nuclear envelope, with protein in large clusters","type":"exact"},{"name":"abnormally clustered protein localisation to nuclear envelope","type":"exact"},{"name":"abnormally clustered protein localization to nuclear envelope during mitotic cell cycle","type":"related"},{"name":"abnormally clustered protein localization to nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormally clustered protein localization to nuclear membrane","type":"related"}],"termid":"FYPO:0007771","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0049421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gulonolactone (L-) oxidase, pseudogene","termid":"PBO:0049421"}


id: GO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of norepinephrine secretion","termid":"GO:0014061"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of norepinephrine secretion","termid":"GO:0010701"}


id: GO:0035808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that initiates the formation of double-strand breaks (DSBs) required for meiotic recombination. Consists of a protein that catalyses formation of the double-strand breaks (Spo11 in S. cerevisiae and Rec12 in S. pombe), and a number of accessory proteins.","definition_xrefs":["PMID:12897161","PMID:20364342","GOC:vw","PMID:21429938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"meiotic recombination initiation complex","termid":"GO:0035808"}


id: PBO:0044275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 16","termid":"PBO:0044275"}


id: PR:U3H0P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:U3H0P2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.06c","synonyms":[{"name":"Spom972h-wtf25","type":"exact"}],"termid":"PR:U3H0P2"}


id: PBO:0066600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q pseudogene 3","termid":"PBO:0066600"}


id: PBO:0044955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 2","termid":"PBO:0044955"}


id: GO:1903714
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98057,105163],"is_not":false,"summary":null,"term":"GO:1903714"}]},"cv_name":"biological_process","definition":"The directed movement of isoleucine across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:18503766","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"isoleucine transport","termid":"GO:0015818"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"isoleucine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903714","terms_by_termid":{"GO:1903714":null}}


id: PBO:0004996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UCS-domain protein Rng3","termid":"PBO:0004996"}


id: GO:0004470
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"malic enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyruvic-malic carboxylase activity","type":"related"}],"termid":"GO:0004470","terms_by_termid":{"GO:0004471":null}}


id: GO:0061251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"}


id: GO:0070072
data:
  {"annotated_genes":["SJAG_04454","SJAG_06514","SJAG_05306","SJAG_01939","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97254,105302,108205,109262,113273],"is_not":false,"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a vacuolar proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across the vacuolar membrane.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex assembly","termid":"GO:0070070"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_01939":null,"SJAG_04454":null,"SJAG_05306":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"V-ATPase assembly","type":"broad"},{"name":"V-ATPase complex assembly","type":"broad"}],"termid":"GO:0070072","terms_by_termid":{"GO:0070072":null}}


id: PBO:0029570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore","termid":"PBO:0029570"}


id: PBO:0033766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rqh1_foci_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033766"}


id: PBO:0045632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 44 (pseudogene)","termid":"PBO:0045632"}


id: GO:0019483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"beta-alanine metabolic process","termid":"GO:0019482"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"beta-alanine biosynthetic process","synonyms":[{"name":"beta-alanine anabolism","type":"exact"},{"name":"beta-alanine biosynthesis","type":"exact"},{"name":"beta-alanine formation","type":"exact"},{"name":"beta-alanine synthesis","type":"exact"}],"termid":"GO:0019483"}


id: GO:0033274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B2","synonyms":[{"name":"response to riboflavin","type":"exact"}],"termid":"GO:0033274"}


id: GO:0036341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of hardening of a chitin-based cuticle by protein cross-linking, and the incorporation of phenolic precursors. This mechanism of cuticle hardening occurs in insects and is usually accompanied by darkening of the cuticle.","definition_xrefs":["GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle sclerotization by protein cross-linking","synonyms":[{"name":"chitin-based cuticle sclerotization by protein cross-linking and cuticle tanning","type":"narrow"}],"termid":"GO:0036341"}


id: GO:1990785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of water immersion while being held immobile.","definition_xrefs":["PMID:10882227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to immobilization stress","termid":"GO:0035902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water-immersion restraint stress","synonyms":[{"name":"response to immobilization stress combined with water immersion","type":"exact"}],"termid":"GO:1990785"}


id: GO:0062086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"}


id: PBO:0076107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 12","termid":"PBO:0076107"}


id: GO:0018259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between RNA and a peptidyl-serine residue by the formation of O-(phospho-5'-5NA)-L-serine.","definition_xrefs":["RESID:AA0213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-protein covalent cross-linking","termid":"GO:0018144"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-protein covalent cross-linking via peptidyl-serine","termid":"GO:0018259"}


id: PBO:0063108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 1","termid":"PBO:0063108"}


id: PBO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1 pseudogene 1","termid":"PBO:0050771"}


id: PR:O74748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs8502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs85-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.07c","synonyms":[{"name":"Spom972h-trs8502","type":"exact"},{"name":"TRAPP subunit trs85-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74748"}


id: PBO:0042175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 5","termid":"PBO:0042175"}


id: GO:0001112
data:
  {"annotated_genes":["SJAG_00116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001113"}]},"cv_name":"biological_process","definition":"Any process involved in the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble.","definition_xrefs":["PMID:18280161","GOC:txnOH","PMID:15020047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex remodeling","termid":"GO:0001120"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"DNA-templated transcription open complex formation","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001127"],"synonyms":[{"name":"DNA-dependent transcriptional open complex formation","type":"exact"},{"name":"DNA-templated transcriptional open complex formation","type":"exact"},{"name":"promoter melting","type":"broad"},{"name":"transcription open complex formation at bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcriptional open complex formation at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001112","terms_by_termid":{"GO:0001113":null}}


id: PBO:0041292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C2","termid":"PBO:0041292"}


id: PBO:0074841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 34","termid":"PBO:0074841"}


id: PBO:0042608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 8","termid":"PBO:0042608"}


id: GO:0004128
data:
  {"annotated_genes":["SJAG_00235","SJAG_02395","SJAG_02794"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76541,76832,113714],"is_not":false,"summary":null,"term":"GO:0004128"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + 2 ferricytochrome b(5) = NAD(P)+ + 2 ferrocytochrome b(5).","definition_xrefs":["ISBN:0198547684","EC:1.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_02395":null,"SJAG_02794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NAD(P)H","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CYTOCHROME-B5-REDUCTASE-RXN","Reactome:R-HSA-198824","Reactome:R-HSA-6806831","RHEA:46680"],"synonyms":[{"name":"NADH 5alpha-reductase activity","type":"related"},{"name":"NADH-cytochrome b5 reductase activity","type":"related"},{"name":"NADH-cytochrome-b5 reductase activity","type":"related"},{"name":"NADH-ferricytochrome b5 oxidoreductase activity","type":"related"},{"name":"NADH:ferricytochrome-b5 oxidoreductase activity","type":"related"},{"name":"cytochrome b5 reductase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide-cytochrome b5 reductase activity","type":"related"},{"name":"reduced nicotinamide adeninedinucleotide-cytochrome b5 reductase activity","type":"related"}],"termid":"GO:0004128","terms_by_termid":{"GO:0004128":null}}


id: PBO:0075560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG11 vesicle trafficking associated, spatacsin","termid":"PBO:0075560"}


id: PBO:0017726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7, Rsm7(predicted)","termid":"PBO:0017726"}


id: GO:0008605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of the enzyme protein kinase CK2.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase CK2 regulator activity (obsolete GO:0008605)","synonyms":[{"name":"casein kinase II, regulator","type":"exact"},{"name":"protein kinase CK2 regulator activity","type":"exact"},{"name":"protein kinase CK2, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008605"}


id: PBO:0082263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminolevulinate dehydratase; a homo-octameric enzyme, catalyzes the conversion of 5-aminolevulinate to porphobilinogen, the second step in heme biosynthesis; enzymatic activity is zinc-dependent; localizes to the cytoplasm and nucleus; human homolog ALAD can complement yeast hem2 mutant","termid":"PBO:0082263"}


id: PR:P0CY14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat3-Mm gene.","definition_xrefs":["UniProtKB:P0CY14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type M-specific polypeptide Mi (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.01c","synonyms":[{"name":"Spom972h-mat3-Mm","type":"exact"}],"termid":"PR:P0CY14"}


id: PR:O59741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prt1 gene.","definition_xrefs":["UniProtKB:O59741","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.05","synonyms":[{"name":"Spom972h-prt1","type":"exact"}],"termid":"PR:O59741"}


id: PBO:0086460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metalloprotease; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P","termid":"PBO:0086460"}


id: GO:0042537
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097052"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation, or any of its derivatives.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"benzene and derivative metabolic process","type":"exact"},{"name":"benzene and derivative metabolism","type":"exact"},{"name":"benzene-containing compound metabolism","type":"exact"}],"termid":"GO:0042537","terms_by_termid":{"GO:0097052":null}}


id: PBO:0081337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 136","termid":"PBO:0081337"}


id: GO:0018320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient methylation of peptidyl-cysteine to form S-methyl-L-cysteine.","definition_xrefs":["RESID:AA0234"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-methyl-L-cysteine (obsolete GO:0018320)","termid":"GO:0018320"}


id: PBO:0047216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 223 member B","termid":"PBO:0047216"}


id: PBO:0034754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome co-factor Txc1","termid":"PBO:0034754"}


id: GO:0090401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular senescence process associated with the dismantling of a cell as a response to viral infection.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete viral-induced premature senescence (obsolete GO:0090401)","termid":"GO:0090401"}


id: PBO:0062423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 84 pseudogene","termid":"PBO:0062423"}


id: GO:0098989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to an NMDA-selective glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor signaling pathway","termid":"GO:0035235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"NMDA selective glutamate receptor signaling pathway","termid":"GO:0098989"}


id: PBO:0043836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1A","termid":"PBO:0043836"}


id: SO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A piece of sequence that makes up a tiling_path (SO:0000472).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"tiling_path","termid":"SO:0000472"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path_fragment","synonyms":[{"name":"tiling path fragment","type":"exact"}],"termid":"SO:0000474"}


id: SO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL8 RNA leader sequence to the 5' end of an mRNA. SL8 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL8_acceptor_site","synonyms":[{"name":"SL8 acceptor site","type":"exact"}],"termid":"SO:0001753"}


id: FYPO:0007624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial cytochrome c oxidase (respiratory chain complex IV) assembly is decreased.","definition_xrefs":["GO:0033617","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitochondrial respiratory chain complex assembly","termid":"FYPO:0007122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex IV assembly","synonyms":[{"name":"decreased mitochondrial cytochrome c oxidase assembly","type":"exact"},{"name":"decreased mitochondrial respiratory chain complex IV assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex IV assembly during vegetative growth","type":"exact"},{"name":"decreased respiratory chain complex IV assembly","type":"exact"}],"termid":"FYPO:0007624"}


id: PR:Q92370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional tryptophan biosynthesis protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.09c","synonyms":[{"name":"Spom972h-trp1","type":"exact"}],"termid":"PR:Q92370"}


id: GO:0018723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenanthrol + X-SO3(-) = HX + 3-phenanthrylsulfate.","definition_xrefs":["UM-BBD_reactionID:r0561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrol sulfotransferase activity","termid":"GO:0019111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3-phenanthrol sulfotransferase activity","synonyms":[{"name":"3-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018723"}


id: FYPO:0006265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are larger than normal after a cell has been subjected to hypotonic osmotic stress. Normally, vacuoles enlarge during hypotonic stress, and return to the original smaller size when the stress is relieved, either due to shrinking or fission.","definition_xrefs":["PomBase:mah","PMID:28944093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles during vegetative growth","termid":"FYPO:0000123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"large vacuoles present following cellular hypotonic response","synonyms":[{"name":"enlarged vacuoles present following cellular hypotonic response","type":"exact"},{"name":"large vacuoles large vacuoles present following cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"large vacuoles present during recovery from cellular hypotonic response","type":"exact"},{"name":"large vacuoles present following cellular hypotonic response during vegetative growth","type":"exact"},{"name":"large vacuoles present following hypotonic stress","type":"exact"}],"termid":"FYPO:0006265"}


id: PR:Q10192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.07","secondary_identifiers":["UniProtKB:Q10192"],"synonyms":[{"name":"Spom972h-RPL18","type":"exact"}],"termid":"PR:Q10192"}


id: GO:0099044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial, indirect interaction between a transport vesicle membrane and the membrane of the endoplasmic reticulum. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior fusion.","definition_xrefs":["PMID:27243008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering","termid":"GO:0099022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle tethering to endoplasmic reticulum","termid":"GO:0099044"}


id: GO:0044528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of mitochondrial mRNA molecules to degradation. Includes processes that both stabilize and destabilize mitochondrial mRNAs.","definition_xrefs":["GOC:al","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0044248","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial mRNA stability","termid":"GO:0044528"}


id: GO:0102954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dalcochinin-8'-O-beta-glucoside + H2O = dalcochinin + D-glucopyranose.","definition_xrefs":["PMID:16814564","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"dalcochinase activity","secondary_identifiers":["MetaCyc:RXN-9162"],"termid":"GO:0102954"}


id: PBO:0076911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 alpha","termid":"PBO:0076911"}


id: PBO:0079360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3f pseudogene","termid":"PBO:0079360"}


id: PBO:0109939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, splicosomal Prp16","termid":"PBO:0109939"}


id: GO:0005665
data:
  {"annotated_genes":["SJAG_04261","SJAG_01713","SJAG_01765","SJAG_02101","SJAG_01313","SJAG_01436","SJAG_04030","SJAG_04894","SJAG_00119","SJAG_02506","SJAG_04559","SJAG_00458","SJAG_02070"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70828,72295,72907,73686,74293,74727,74796,75361,75869,76709,77495,104425,107936],"is_not":false,"summary":null,"term":"GO:0005665"}]},"cv_name":"cellular_component","definition":"RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_04030":null,"SJAG_04261":null,"SJAG_04559":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005654","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase II, core complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, core complex","type":"exact"},{"name":"RNA polymerase II complex","type":"broad"},{"name":"RNAP II complex","type":"broad"}],"termid":"GO:0005665","terms_by_termid":{"GO:0005665":null}}


id: GO:0090448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucosinolate(out) + H+(out) = glucosinolate(in) + H+(in).","definition_xrefs":["PMID:22864417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glucosinolate:proton symporter activity","synonyms":[{"name":"glucosinolate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0090448"}


id: GO:0002656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction dependent upon immune response","termid":"GO:0002653"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to nonself antigen","synonyms":[{"name":"down regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"down-regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"downregulation of tolerance induction to nonself antigen","type":"exact"},{"name":"inhibition of tolerance induction to nonself antigen","type":"narrow"}],"termid":"GO:0002656"}


id: PBO:0087810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere end-binding and capping protein; plays a key role with Pol12p in linking telomerase action with completion of lagging strand synthesis, and in a regulatory step required for telomere capping; similar to human Stn1","termid":"PBO:0087810"}


id: PBO:0041283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 8","termid":"PBO:0041283"}


id: PBO:0036088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity_during_nitrogen_starvation","termid":"PBO:0036088"}


id: PBO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030338"}


id: GO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing a cleistothecium, a closed sexual fruiting body that contains ascospores in linear asci. Cleistothecia are present in some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["PMID:28889020","PMID:30410052","PMID:20348388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium formation","termid":"GO:0062248"}


id: GO:0097529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a myeloid leukocyte within or between different tissues and organs of the body.","definition_xrefs":["PMID:24157461","GOC:cvs","PMID:22342843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte migration","termid":"GO:0097529"}


id: GO:0007138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of meiosis II.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"},{"relation_name":"part_of","term_name":"anaphase","termid":"GO:0051322"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051327"}],"interesting_parent_ids":["GO:0008150","GO:0051327"],"is_obsolete":false,"name":"meiotic anaphase II","termid":"GO:0007138"}


id: GO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a lipopolysaccharide (LPS) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Lipopolysaccharides are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:15379975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"LPS-mediated signaling pathway","type":"exact"},{"name":"lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031663"}


id: PBO:0004591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18 (predicted)","termid":"PBO:0004591"}


id: PBO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounded_by","termid":"PBO:0034107"}


id: PBO:0027267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_pheromone","termid":"PBO:0027267"}


id: GO:0160103
data:
  {"annotated_genes":["SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102459],"is_not":false,"summary":null,"term":"GO:0160103"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(26)/guanosine(27) in tRNA + 4 S-adenosyl-L-methionine = 4 H(+) + N(2)-dimethylguanosine(26)/N(2)-dimethylguanosine(27) in tRNA + 4 S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00886":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA (guanine(26)-N2/guanine(27)-N2)-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:43136"],"synonyms":[{"name":"tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(26)-N(2)/guanosine(27)-N(2))-dimethyltransferase activity","type":"exact"}],"termid":"GO:0160103","terms_by_termid":{"GO:0160103":null}}


id: GO:0055002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.","definition_xrefs":["CL:0000737","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell development","termid":"GO:0055001"},{"relation_name":"part_of","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell development","termid":"GO:0055002"}


id: GO:0110025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of DNA at the site of a stalled replication fork that contributes to replication fork processing.","definition_xrefs":["PMID:28475874","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"replication fork processing","termid":"GO:0031297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA strand resection involved in replication fork processing","termid":"GO:0110025"}


id: FYPO:0006493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of chitin synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased chitin synthase activity","termid":"FYPO:0006493"}


id: PBO:0089254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme synthase Met8","termid":"PBO:0089254"}


id: PBO:0073543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 1","termid":"PBO:0073543"}


id: GO:0098511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect low environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of low humidity","termid":"GO:0098511"}


id: PATO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000127 relative mass (obsolete PATO:0000127)","termid":"PATO:0000127"}


id: PBO:0082419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional inositol pyrophosphate kinase and phosphatase; contains an N-terminal PP-InsP kinase domain that phosphorylates inositol hexakisphosphate and heptakisphosphate, and a C-terminal phosphatase domain that hydrolyzes both 1PP-InsP5 and 5PP-InsP5; IP7 levels decrease during starvation, suggesting a role for PP-InsP enzymes in Pi homeostasis; may regulate the dimorphic switch and the function of the cortical actin cytoskeleton","termid":"PBO:0082419"}


id: FYPO:0000290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects DNA-dependent transcription.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"transcription phenotype during vegetative growth","synonyms":[{"name":"transcription phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000290"}


id: PBO:0005307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp13 (predicted)","termid":"PBO:0005307"}


id: FYPO:0001210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Glc2Man9GlcNAc2 measured in a cell is too low to detect. Glc2Man9GlcNAc2 is an N-glycan that is involved in post-translational modification of proteins, and consists of a branched ten-membered mannooligosaccharide containing two D-glucose residues, nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PomBase:mah","PMID:9813085","CHEBI:59082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"Glc2Man9GlcNAc absent from cell","synonyms":[{"name":"Glc2Man9GlcNAc absent from cell during mitotic cell cycle","type":"related"},{"name":"Glc2Man9GlcNAc absent from cell during vegetative growth","type":"exact"},{"name":"Glc2Man9GlcNAc2 absent from cell","type":"exact"},{"name":"absent Glc2Man9GlcNAc","type":"exact"}],"termid":"FYPO:0001210"}


id: SO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from cyanelle sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_gene","synonyms":[{"name":"cyanelle gene","type":"exact"}],"termid":"SO:0000094"}


id: GO:0034151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"regulation of TLR6 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034151"}


id: GO:0031822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1B receptor binding","type":"exact"},{"name":"type 1B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031822"}


id: PBO:0064673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 8","termid":"PBO:0064673"}


id: GO:0071305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin D","termid":"GO:0033280"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin D","synonyms":[{"name":"cellular response to calciferol","type":"exact"},{"name":"cellular response to cholecalciferol","type":"narrow"},{"name":"cellular response to ergocalciferol","type":"narrow"}],"termid":"GO:0071305"}


id: PBO:0040823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2 pseudogene 1","termid":"PBO:0040823"}


id: PBO:0046943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member E","termid":"PBO:0046943"}


id: PBO:0059420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 6","termid":"PBO:0059420"}


id: FYECO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amorolfine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amorolfine","synonyms":[{"name":"+ amorolfine","type":"exact"}],"termid":"FYECO:0000424"}


id: PBO:0062725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 4 pseudogene","termid":"PBO:0062725"}


id: GO:0097263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin D4 + H20 = eoxin E4 + glycine.","definition_xrefs":["PMID:18184802","PMID:18647347","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0008233","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"eoxin E4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161868"],"termid":"GO:0097263"}


id: FYPO:0003136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more plasma membrane than normal. Excess plasma membrane may appear as bubble-like structures inside the cell, and may be concentrated in the mating projection during conjugation.","definition_xrefs":["PMID:19627505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"excess plasma membrane present","synonyms":[{"name":"excess mating projection membrane present","type":"narrow"},{"name":"excess plasma membrane present during mitotic cell cycle","type":"related"},{"name":"excess plasma membrane present during vegetative growth","type":"exact"},{"name":"internal membrane bubbles present","type":"related"}],"termid":"FYPO:0003136"}


id: PBO:0055521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2955","termid":"PBO:0055521"}


id: _global:immediately_causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"immediately_precedes","termid":"_global:immediately_precedes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_upstream_of","secondary_identifiers":["RO:0002412"],"termid":"_global:immediately_causally_upstream_of"}


id: GO:0019988
data:
  {"annotated_genes":["SJAG_05228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70983],"is_not":false,"summary":null,"term":"GO:0019988"}]},"cv_name":"biological_process","definition":"The covalent alteration of an amino acid charged on a tRNA before it is incorporated into a protein, as in N-formylmethionine, selenocysteine or pyrrolysine.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"charged-tRNA amino acid modification","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0030630"],"synonyms":[{"name":"charged tRNA amino acid modification","type":"exact"},{"name":"charged tRNA modification","type":"exact"},{"name":"charged-tRNA modification","type":"related"},{"name":"pre-translational amino acid modification","type":"exact"},{"name":"pre-translational protein modification","type":"exact"},{"name":"pretranslation protein modification","type":"exact"},{"name":"pretranslational amino acid modification","type":"exact"}],"termid":"GO:0019988","terms_by_termid":{"GO:0019988":null}}


id: GO:0071474
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87836],"is_not":false,"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular HOG response","type":"exact"},{"name":"cellular hypertonic response","type":"exact"},{"name":"cellular response to hypertonicity","type":"exact"}],"termid":"GO:0071474","terms_by_termid":{"GO:0071474":null}}


id: PBO:0058862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9500","termid":"PBO:0058862"}


id: PBO:0038371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_application_role","termid":"PBO:0038371"}


id: PBO:0046742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 1 like","termid":"PBO:0046742"}


id: GO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of non-rapid eye movement (NREM) sleep.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, non-REM sleep","termid":"GO:0045188"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, non-REM sleep","type":"narrow"},{"name":"negative regulation of non-REM sleep","type":"exact"}],"termid":"GO:0042323"}


id: PBO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc20/Fizzy subfamily","termid":"PBO:0000189"}


id: PBO:0079427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 10","termid":"PBO:0079427"}


id: FYPO:0001986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 5-fluorouracil than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to 5-fluorouracil","synonyms":[{"name":"resistance to 5-FU","type":"exact"},{"name":"resistance to 5-fluorouracil during mitotic cell cycle","type":"related"},{"name":"resistance to 5-fluorouracil during vegetative growth","type":"exact"},{"name":"resistant to 5-fluorouracil","type":"exact"}],"termid":"FYPO:0001986"}


id: PBO:0045802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDNRB antisense RNA 1","termid":"PBO:0045802"}


id: FYPO:0004050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is decreased in a cell culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased glutathione transferase activity","termid":"FYPO:0004034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased glutathione transferase activity during stationary phase","synonyms":[{"name":"decreased glutathione transferase activity in stationary phase","type":"exact"},{"name":"reduced glutathione transferase activity during stationary phase","type":"exact"}],"termid":"FYPO:0004050"}


id: PBO:0085094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor for the ribosomal pre-60S subunit; shuttling factor which directly binds FG rich nucleoporins and facilities translocation through the nuclear pore complex; interacts directly with Alb1p; responsible for Tif6p recycling defects in the absence of Rei1; associated with the ribosomal export complex","termid":"PBO:0085094"}


id: GO:0048719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the epistomal sclerite are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"epistomal sclerite development","termid":"GO:0048724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epistomal sclerite morphogenesis","termid":"GO:0048719"}


id: PBO:0088262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein","termid":"PBO:0088262"}


id: PBO:0082230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha catalytic subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082230"}


id: PBO:0003060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, transcription factor Zas1 (predicted)","termid":"PBO:0003060"}


id: PBO:0040144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-silencing function 1A histone chaperone","termid":"PBO:0040144"}


id: PBO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_at_hotspot","termid":"PBO:0034571"}


id: PBO:0071247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 88","termid":"PBO:0071247"}


id: PBO:0078479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 3-1","termid":"PBO:0078479"}


id: PBO:0080767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xin actin binding repeat containing 2","termid":"PBO:0080767"}


id: GO:0098828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inhibitory postsynaptic potential (IPSP). IPSP is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"regulates","term_name":"inhibitory postsynaptic potential","termid":"GO:0060080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation of inhibitory postsynaptic potential","synonyms":[{"name":"regulation of inhibitory postsynaptic potential","type":"exact"}],"termid":"GO:0098828"}


id: PBO:0085723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the control of meiotic nuclear division; involved in the coordination of meiosis with spore formation; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane during meiosis II; required for assembly of the leading edge coat and both prospore membrane shaping and organization; transcription is induced midway through meiosis","termid":"PBO:0085723"}


id: GO:0098833
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the plasma membrane and underlying cytoplasm which surround the the active zone, into which synaptic vesicle membranes are recycled following exocytosis. It is especially enriched in endocytic proteins following intense activity.","definition_xrefs":["PMID:17455288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic endocytic zone","termid":"GO:0098833"}


id: MOD:00901
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-alanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-alanine residue","synonyms":[{"name":"ModAla","type":"exact"}],"termid":"MOD:00901"}


id: PBO:0076146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate receptor 1","termid":"PBO:0076146"}


id: PBO:0054369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1763","termid":"PBO:0054369"}


id: PBO:0052664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 32","termid":"PBO:0052664"}


id: FYPO:0004804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly does not occur. An actin fusion focus normally forms during mating at the site where the two cells will fuse.","definition_xrefs":["PomBase:mah","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000301","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"abolished actin fusion focus assembly","synonyms":[{"name":"abolished actin fusion focus formation","type":"exact"},{"name":"actin fusion focus assembly abolished","type":"exact"}],"termid":"FYPO:0004804"}


id: GO:0030660
data:
  {"annotated_genes":["SJAG_02482","SJAG_04565","SJAG_04609","SJAG_04002","SJAG_00379","SJAG_02282","SJAG_01809","SJAG_01508","SJAG_04070","SJAG_00192","SJAG_04517","SJAG_04474","SJAG_04391","SJAG_04569","SJAG_02234"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76441,107870,96414,108085],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[107991,90278],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[93783,88635,76661,70815,72918,78274,102310,111402,76967],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00379":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Golgi-associated vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle membrane","type":"related"}],"termid":"GO:0030660","terms_by_termid":{"GO:0030121":null,"GO:0030126":null,"GO:0030130":null}}


id: GO:0009702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose + ATP = beta-L-arabinose 1-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.46","RHEA:20153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-arabinokinase activity","secondary_identifiers":["KEGG_REACTION:R01754","MetaCyc:L-ARABINOKINASE-RXN"],"synonyms":[{"name":"ATP:L-arabinose 1-phosphotransferase activity","type":"exact"},{"name":"L-arabinokinase (phosphorylating)","type":"related"}],"termid":"GO:0009702"}


id: PBO:0031668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_transport","termid":"PBO:0031668"}


id: FYECO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which alpha-tocopherol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ alpha-tocopherol","synonyms":[{"name":"vitamin E added","type":"related"}],"termid":"FYECO:0000183"}


id: PBO:0086431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086431"}


id: GO:0045178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a cell situated near the base. For example, in a polarized epithelial cell, the basal surface rests on the basal lamina that separates the epithelium from other tissue.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal part of cell","termid":"GO:0045178"}


id: PBO:0003498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transporter (predicted)","termid":"PBO:0003498"}


id: PBO:0082079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-deoxynucleotidase involved in deoxyribonucleoside monophosphate degradation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; non-essential gene; YBR242W has a paralog, YGL101W, that arose from the whole genome duplication","termid":"PBO:0082079"}


id: PBO:0060731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 2","termid":"PBO:0060731"}


id: PBO:0027016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_catalytic_activity","termid":"PBO:0027016"}


id: GO:0010854
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of adenylate cyclase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"adenylate cyclase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010854","terms_by_termid":{"GO:0010856":null}}


id: PBO:0049633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 36","termid":"PBO:0049633"}


id: GO:0052454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052454)","synonyms":[{"name":"modulation by organism of symbiont JA-mediated defense response","type":"exact"},{"name":"modulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"}],"termid":"GO:0052454"}


id: PR:O13965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug70 gene.","definition_xrefs":["UniProtKB:O13965","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 70 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.05c","synonyms":[{"name":"Spom972h-mug70","type":"exact"}],"termid":"PR:O13965"}


id: PBO:0017443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulated_by","termid":"PBO:0017443"}


id: GO:2000918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucuronoarabinoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"regulates","term_name":"glucuronoarabinoxylan catabolic process","termid":"GO:2000887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucuronoarabinoxylan catabolic process","synonyms":[{"name":"regulation of glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000918"}


id: PBO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary spastic paraplegia","termid":"PBO:0003297"}


id: GO:0061917
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the dendritic growth cone which represents the distal part of the structure.","definition_xrefs":["PMID:16098134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth cone leading edge","termid":"GO:0061850"},{"relation_name":"part_of","term_name":"dendritic growth cone","termid":"GO:0044294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"leading edge of dendritic growth cone","synonyms":[{"name":"dendritic growth cone leading edge","type":"exact"},{"name":"distal tip of dendritic growth cone","type":"exact"}],"termid":"GO:0061917"}


id: GO:0015436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + capsular polysaccharide(in) = ADP + phosphate + capsular polysaccharide(out).","definition_xrefs":["EC:7.6.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type capsular-polysaccharide transporter activity","secondary_identifiers":["MetaCyc:3.6.3.38-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (capsular-polysaccharide-exporting)","type":"related"},{"name":"ATP-dependent capsular-polysaccharide transporter activity","type":"exact"},{"name":"ATPase-coupled capsular-polysaccharide transporter activity","type":"related"},{"name":"capsular-polysaccharide ABC transporter","type":"narrow"},{"name":"capsular-polysaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015436"}


id: GO:0010106
data:
  {"annotated_genes":["SJAG_04743","SJAG_04031","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89508,89516,99040],"is_not":false,"summary":null,"term":"GO:0010106"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of iron ions.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"part_of","term_name":"intracellular iron ion homeostasis","termid":"GO:0006879"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04031":null,"SJAG_04032":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"cellular response to iron ion starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010106","terms_by_termid":{"GO:0010106":null}}


id: PBO:0053471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 437","termid":"PBO:0053471"}


id: MOD:02057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tryptophan residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-tryptophan residue","synonyms":[{"name":"XlnkTrp","type":"exact"}],"termid":"MOD:02057"}


id: FYPO:0001189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cilofungin. Cells stop growing (and may die) at a concentration of cilofungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cilofungin","synonyms":[{"name":"hypersensitive to cilofungin","type":"exact"},{"name":"sensitive to cilofungin during mitotic cell cycle","type":"related"},{"name":"sensitive to cilofungin during vegetative growth","type":"exact"}],"termid":"FYPO:0001189"}


id: PBO:0058545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6124","termid":"PBO:0058545"}


id: GO:0045332
data:
  {"annotated_genes":["SJAG_00587","SJAG_05209","SJAG_02114","SJAG_02943","SJAG_06440","SJAG_02957","SJAG_03050","SJAG_01945","SJAG_00589","SJAG_00018","SJAG_00669","SJAG_01095","SJAG_02132","SJAG_02516","SJAG_02897","SJAG_01731","SJAG_01470","SJAG_00230","SJAG_02581","SJAG_00576"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72367,73784,74036,86008,86009,86010,86011,86012,86013,86014,86015,86016,94774,96570,97482,97601,100294,104664],"is_not":false,"summary":null,"term":"GO:0045332"},{"annotations":[68598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[72633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The movement of a phospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["PMID:20302864","ISBN:0815316194","PMID:20043909","PMID:16452632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_05209":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"phospholipid translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"flippase","type":"related"},{"name":"phospholipid scrambling","type":"related"}],"termid":"GO:0045332","terms_by_termid":{"GO:0017121":null,"GO:0045332":null,"GO:0140331":null}}


id: PBO:0004938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Uap2","termid":"PBO:0004938"}


id: PBO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, spliceosomal (predicted)","termid":"PBO:0001354"}


id: GO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of a ganglion. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"ganglion morphogenesis","termid":"GO:0061552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion structural organization","synonyms":[{"name":"ganglia structural organization","type":"related"}],"termid":"GO:0061555"}


id: FYPO:0002912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, is elongated, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated multinucleate cell","synonyms":[{"name":"inviable after spore germination, multinucleate elongated cell","type":"exact"},{"name":"inviable after spore germination, undivided elongated multinucleate cell","type":"exact"},{"name":"inviable following spore germination, without cell division, elongated multinucleate cell","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated multinucleate cell","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated multinucleate cell","type":"exact"}],"termid":"FYPO:0002912"}


id: PBO:0081036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12D","termid":"PBO:0081036"}


id: GO:0005687
data:
  {"annotated_genes":["SJAG_03469","SJAG_02279","SJAG_00147","SJAG_04529","SJAG_01301"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70364,72243,74172,75896,77791],"is_not":false,"summary":null,"term":"GO:0005687"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U4, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U4 snRNP, most of which remain associated with the U4 snRNA both while the U4 snRNP is free or assembled into the U4/U6 snRNP or into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_01301":null,"SJAG_02279":null,"SJAG_03469":null,"SJAG_04529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U4 snRNP","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"snRNP U4","type":"exact"}],"termid":"GO:0005687","terms_by_termid":{"GO:0005687":null}}


id: PBO:0084874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP1 exhibits genetic interactions with PET122, encoding a COX3-specific translational activator, and with PET123, encoding a small subunit mitochondrial ribosomal protein","termid":"PBO:0084874"}


id: PBO:0075744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 3","termid":"PBO:0075744"}


id: GO:2000971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of detection of glucose","termid":"GO:2000970"},{"relation_name":"negatively_regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of detection of glucose","synonyms":[{"name":"negative regulation of glucose detection","type":"exact"},{"name":"negative regulation of glucose perception","type":"related"},{"name":"negative regulation of glucose sensing","type":"related"}],"termid":"GO:2000971"}


id: SO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding asparaginyl tRNA (SO:0000256).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine_tRNA_primary_transcript","synonyms":[{"name":"asparagine tRNA primary transcript","type":"exact"}],"termid":"SO:0000213"}


id: PBO:0043012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKA divergent transcript","termid":"PBO:0043012"}


id: GO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines.","definition_xrefs":["PMID:10915863","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"photoreactive repair","synonyms":[{"name":"pyrimidine-dimer repair by photolyase","type":"narrow"}],"termid":"GO:0000719"}


id: PBO:0077449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 182","termid":"PBO:0077449"}


id: PBO:0069410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 670, pseudogene","termid":"PBO:0069410"}


id: GO:0033847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + hydrogen sulfide = L-cysteine + phosphate.","definition_xrefs":["EC:2.5.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O-phosphoserine sulfhydrylase activity","secondary_identifiers":["RHEA:10252","MetaCyc:2.5.1.65-RXN"],"synonyms":[{"name":"O-phospho-L-serine:hydrogen-sulfide 2-amino-2-carboxyethyltransferase activity","type":"related"},{"name":"O-phosphoserine(thiol)-lyase activity","type":"related"}],"termid":"GO:0033847"}


id: PBO:0074141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B1","termid":"PBO:0074141"}


id: GO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a component of the complement pathway binding to a complement receptor. Such components include both whole complement proteins and fragments of complement proteins generated through the activity of the complement pathway.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"complement receptor mediated signaling pathway","synonyms":[{"name":"complement receptor mediated signalling pathway","type":"exact"},{"name":"immune response-regulating cell surface receptor signalling pathway","type":"broad"}],"termid":"GO:0002430"}


id: PBO:0071407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 13","termid":"PBO:0071407"}


id: PBO:0064315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 4","termid":"PBO:0064315"}


id: PBO:0088017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments","termid":"PBO:0088017"}


id: GO:0000461
data:
  {"annotated_genes":["SJAG_04174"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73773],"is_not":false,"summary":null,"term":"GO:0000461"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage at the 3'-end of the SSU-rRNA from an originally tricistronic rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endonucleolytic cleavage at site D","type":"narrow"}],"termid":"GO:0000461","terms_by_termid":{"GO:0000461":null}}


id: GO:0070770
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface antigen CD47 and the kinase FAK.","definition_xrefs":["PMID:9169439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD47-FAK complex","synonyms":[{"name":"ITGA2b-ITGB3-CD47-FAK complex","type":"narrow"}],"termid":"GO:0070770"}


id: GO:0019253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthesis, dark reaction","termid":"GO:0019685"},{"relation_name":"part_of","term_name":"carbon fixation","termid":"GO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"reductive pentose-phosphate cycle","secondary_identifiers":["MetaCyc:CALVIN-PWY"],"synonyms":[{"name":"C3 photosynthesis","type":"narrow"},{"name":"Calvin cycle","type":"narrow"}],"termid":"GO:0019253"}


id: GO:0038060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which the signal is passed on within the cell by nitric oxide (NO) activating soluble guanylyl cyclase (sGC). Includes synthesis of nitric oxide, guanylyl cyclase activity, and downstream effectors that further transmit the signal within the cell following activation by cGMP.","definition_xrefs":["GOC:signaling","PMID:21549190","PMID:22019632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"},{"relation_name":"is_a","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nitric oxide-cGMP-mediated signaling pathway","synonyms":[{"name":"NO-cGMP signaling pathway","type":"exact"},{"name":"canonical nitric oxide signaling","type":"exact"},{"name":"classical nitric oxide signaling","type":"exact"},{"name":"nitric oxide-cGMP-mediated signalling pathway","type":"exact"}],"termid":"GO:0038060"}


id: GO:0000701
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72829],"is_not":false,"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of purines present in mismatches, especially opposite oxidized purines, by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"purine-specific mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.2.2.31"],"synonyms":[{"name":"A/G-specific adenine DNA glycosylase activity","type":"narrow"}],"termid":"GO:0000701","terms_by_termid":{"GO:0000701":null}}


id: PBO:0030616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cilofungin","termid":"PBO:0030616"}


id: MOD:01879
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-arginine residue, an L-threonine residue and a copper atom to the methanobactin SB2 copper complex.","definition_xrefs":["RESID:AA0555","PubMed:20961038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methanobactin SB2 copper complex","synonyms":[{"name":"METAL copper [Cu-methanobactin SB2 complex]","type":"exact"},{"name":"[5-(hydroxy[sulfanyl-kappaS]methylene)-3,5-dihydro-4H-imidazol-4-onato-kappaN1][4-(hydroxy[sulfanyl-kappaS]methylene)-1,3-oxazol-5(4H)-onato-kappaN]copper","type":"exact"},{"name":"methanobactin SB2 copper complex","type":"exact"}],"termid":"MOD:01879"}


id: PBO:0062473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 1","termid":"PBO:0062473"}


id: PBO:0110325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR2 pseudogene 1","termid":"PBO:0110325"}


id: PBO:0027192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_equatorial_microtubule_organizing_center_present_in_decreased_numbers","termid":"PBO:0027192"}


id: GO:0033908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-L-rhamnose residues in beta-L-rhamnosides.","definition_xrefs":["EC:3.2.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"beta-L-rhamnosidase activity","secondary_identifiers":["MetaCyc:3.2.1.43-RXN"],"synonyms":[{"name":"beta-L-rhamnoside rhamnohydrolase activity","type":"related"}],"termid":"GO:0033908"}


id: PBO:0079862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC homeobox","termid":"PBO:0079862"}


id: PBO:0030059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0030059"}


id: PBO:0074480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD specific E3 ubiquitin protein ligase 2","termid":"PBO:0074480"}


id: PBO:0084100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanosine diphosphatase located in the Golgi; involved in the transport of GDP-mannose into the Golgi lumen, converting GDP to GMP after mannose is transferred to substrates; null mutants are defective in sporulation and pre-meiotic S phase entry; orthologous to human ENTPD6, a meiosis-associated non-obstructive azoospermia (NOA) related gene identified in GWAS studies","termid":"PBO:0084100"}


id: GO:0009869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction between a pollen grain and pistil that results in inhibition of pollen germination/growth.","definition_xrefs":["PMID:10375566"],"gene_count":0,"genotype_count":0,"name":"obsolete incompatible pollen-pistil interaction (obsolete GO:0009869)","synonyms":[{"name":"incompatible pollen-pistil interaction","type":"exact"}],"termid":"GO:0009869"}


id: PATO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000896 f2 fertility value (obsolete PATO:0000896)","termid":"PATO:0000896"}


id: PBO:0071767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2","termid":"PBO:0071767"}


id: GO:0019404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactitol metabolic process","termid":"GO:0019402"},{"relation_name":"is_a","term_name":"hexitol catabolic process","termid":"GO:0019407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"galactitol catabolic process","secondary_identifiers":["MetaCyc:GALACTITOLCAT-PWY"],"synonyms":[{"name":"galactitol breakdown","type":"exact"},{"name":"galactitol catabolism","type":"exact"},{"name":"galactitol degradation","type":"exact"}],"termid":"GO:0019404"}


id: FYPO:0006782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in a complex that is a precursor of the large ribosomal subunit is lower than normal.","definition_xrefs":["PomBase:mah","PMID:27667686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level in large ribosomal subunit precursor","synonyms":[{"name":"decreased large ribosomal subunit precursor complex protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in large ribosomal subunit precursor during mitotic cell cycle","type":"related"},{"name":"decreased protein level in large ribosomal subunit precursor during vegetative growth","type":"exact"},{"name":"decreased protein level in preribosome, large subunit precursor","type":"exact"},{"name":"reduced protein level in large ribosomal subunit precursor","type":"exact"}],"termid":"FYPO:0006782"}


id: PBO:0109466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDAH family member 2, ADMA-independent","termid":"PBO:0109466"}


id: PBO:0046666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial splicing regulatory protein 1","termid":"PBO:0046666"}


id: PBO:0074334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAL1 antisense RNA 1","termid":"PBO:0074334"}


id: PBO:0061541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSUN5 pseudogene 1","termid":"PBO:0061541"}


id: GO:2000056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in digestive tract morphogenesis.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway involved in digestive tract morphogenesis (obsolete GO:2000056)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in digestive tract morphogenesis","type":"related"}],"termid":"GO:2000056"}


id: PBO:0078157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 35","termid":"PBO:0078157"}


id: GO:0106393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"}


id: PBO:0042520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 1","termid":"PBO:0042520"}


id: PBO:0038325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immersed_in","termid":"PBO:0038325"}


id: PBO:0062862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase, ubiquitin aldehyde binding 1","termid":"PBO:0062862"}


id: PBO:0084608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YBL103C-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBL104C","termid":"PBO:0084608"}


id: PBO:0062520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily L member 1 pseudogene","termid":"PBO:0062520"}


id: FYPO:0006962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UDP-N-acetylglucosamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular UDP-N-acetylglucosamine level","synonyms":[{"name":"increased UDP-N-acetylglucosamine accumulation","type":"related"},{"name":"increased cellular UDP-N-acetyl-alpha-D-glucosamine level","type":"exact"},{"name":"increased cellular UDP-N-acetylglucosamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular UDP-N-acetylglucosamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006962"}


id: PBO:0055437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2868","termid":"PBO:0055437"}


id: GO:0004342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = beta-D-fructose 6-phosphate + NH4.","definition_xrefs":["RHEA:12172","EC:3.5.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"glucosamine-6-phosphate deaminase activity","secondary_identifiers":["KEGG_REACTION:R00765","MetaCyc:GLUCOSAMINE-6-P-DEAMIN-RXN","Reactome:R-HSA-6799604"],"synonyms":[{"name":"2-amino-2-deoxy-D-glucose-6-phosphate aminohydrolase (ketol isomerizing)","type":"related"},{"name":"GlcN6P deaminase activity","type":"related"},{"name":"aminodeoxyglucosephosphate isomerase activity","type":"related"},{"name":"glucosamine phosphate deaminase activity","type":"related"},{"name":"glucosamine-6-phosphate isomerase activity","type":"related"},{"name":"glucosaminephosphate isomerase","type":"broad"},{"name":"phosphoglucosamine isomerase activity","type":"related"},{"name":"phosphoglucosaminisomerase activity","type":"related"}],"termid":"GO:0004342"}


id: GO:0097351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a toxin to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:22545240","PMID:24806488","Wikipedia:Toxin-antitoxin_system#Type_II","PMID:19325885","GOC:rs","PMID:19143615","PMID:21819231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"toxin sequestering activity","synonyms":[{"name":"toxin-antitoxin pair type I binding","type":"narrow"},{"name":"toxin-antitoxin pair type II binding","type":"narrow"}],"termid":"GO:0097351"}


id: PBO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1688 family protein","termid":"PBO:0001209"}


id: PBO:0053523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 518","termid":"PBO:0053523"}


id: MOD:00250
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-lysine residue to form L-lysine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,5-diaminopentyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,5-bis(azanyl)pentyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"L-lysine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00250"}


id: GO:0035811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of urine volume","synonyms":[{"name":"antidiuresis","type":"broad"},{"name":"decrease in urine flow","type":"exact"},{"name":"reduction of urinary volume","type":"exact"}],"termid":"GO:0035811"}


id: GO:1901640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to XTP.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"XTP binding","termid":"GO:1901640"}


id: GO:0045960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation by the classical pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002925"},{"relation_name":"is_a","term_name":"regulation of complement activation, classical pathway","termid":"GO:0030450"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation, classical pathway","synonyms":[{"name":"activation of complement activation, classical pathway","type":"narrow"},{"name":"positive regulation of complement cascade, classical pathway","type":"exact"},{"name":"stimulation of complement activation, classical pathway","type":"narrow"},{"name":"up regulation of complement activation, classical pathway","type":"exact"},{"name":"up-regulation of complement activation, classical pathway","type":"exact"},{"name":"upregulation of complement activation, classical pathway","type":"exact"}],"termid":"GO:0045960"}


id: GO:0141147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when calcium ions bind on the intracellular side of the channel complex or one of its constituent parts.","definition_xrefs":["PMID:23021213","PMID:20929730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intracellularly calcium-gated channel activity","termid":"GO:0141147"}


id: GO:0010422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of brassinosteroids.","definition_xrefs":["PMID:16857903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"}


id: GO:0045711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of adult salivary gland boundary specification","termid":"GO:0045707"},{"relation_name":"positively_regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult salivary gland boundary specification","synonyms":[{"name":"activation of adult salivary gland determination","type":"narrow"},{"name":"positive regulation of adult salivary gland determination","type":"exact"},{"name":"stimulation of adult salivary gland determination","type":"narrow"},{"name":"up regulation of adult salivary gland determination","type":"exact"},{"name":"up-regulation of adult salivary gland determination","type":"exact"},{"name":"upregulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045711"}


id: PR:Q9UUA8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saw1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUA8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C409.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.16c","synonyms":[{"name":"Spom972h-saw1","type":"exact"}],"termid":"PR:Q9UUA8"}


id: GO:1901192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"positively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of translation initiation ternary complex","synonyms":[{"name":"activation of formation of translation initiation ternary complex","type":"narrow"},{"name":"activation of translation initiation ternary complex assembly","type":"exact"},{"name":"positive regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"up regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"up regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"up-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"up-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"upregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"upregulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901192"}


id: PBO:0076777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis development related protein","termid":"PBO:0076777"}


id: GO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of iron ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete iron ion homeostasis (obsolete GO:0055072)","synonyms":[{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0055072"}


id: PBO:0017939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cactin, spliceosome complex subunit","termid":"PBO:0017939"}


id: PBO:0017714
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF1","termid":"PBO:0017714"}


id: PBO:0056311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP2K5 divergent transcript","termid":"PBO:0056311"}


id: PATO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of entities of this type that are part of the whole organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"},{"relation_name":"reciprocal_of","term_name":"has number of","termid":"PATO:0001555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amount","secondary_identifiers":["PATO:0001226","PATO:0000053","PATO:0001169","PATO:0000071"],"synonyms":[{"name":"count","type":"exact"},{"name":"count in organism","type":"related"},{"name":"number","type":"related"},{"name":"presence","type":"related"},{"name":"presence or absence in organism","type":"exact"},{"name":"quantitative","type":"exact"}],"termid":"PATO:0000070"}


id: GO:0035307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of removal of phosphate groups from a protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein dephosphorylation","termid":"GO:0035304"},{"relation_name":"is_a","term_name":"positive regulation of dephosphorylation","termid":"GO:0035306"},{"relation_name":"positively_regulates","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein dephosphorylation","synonyms":[{"name":"activation of protein amino acid dephosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"stimulation of protein amino acid dephosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"upregulation of protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0035307"}


id: PBO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity Imt1","termid":"PBO:0090437"}


id: PBO:0063390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6-AHRR readthrough (NMD candidate)","termid":"PBO:0063390"}


id: PBO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal fragment of Rec8 generated by separase-mediated cleavage is an endogenous substrate of the N-end rule pathway","termid":"PBO:0015687"}


id: FYPO:0005405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA recombination is increased in telomeric regions.","definition_xrefs":["PMID:12930956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA recombination at telomere during vegetative growth","synonyms":[{"name":"increased DNA recombination at telomere during mitotic cell cycle","type":"related"},{"name":"increased DNA recombination frequency at telomere during vegetative growth","type":"related"},{"name":"increased DNA recombination rate at telomere during vegetative growth","type":"related"},{"name":"increased recombination at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0005405"}


id: PBO:0059406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 3","termid":"PBO:0059406"}


id: PBO:0086912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Y' element ATP-dependent helicase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YML133C contains an intron","termid":"PBO:0086912"}


id: PBO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic adaptor Any2 (predicted)","termid":"PBO:0016065"}


id: PBO:0064471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 2, accessory subunit","termid":"PBO:0064471"}


id: GO:0030519
data:
  {"annotated_genes":["SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062064"}]},"cv_name":"molecular_function","definition":"Binding to a small nucleolar ribonucleoprotein particle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"snoRNP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030519","terms_by_termid":{"GO:0062064":null}}


id: PBO:0077078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor molecule 1","termid":"PBO:0077078"}


id: PBO:0049854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECTD2 antisense RNA 1","termid":"PBO:0049854"}


id: PBO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036145"}


id: PBO:0027062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0027062"}


id: GO:2000846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of corticosteroid hormone secretion","synonyms":[{"name":"regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000846"}


id: GO:1901811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-carotene.","definition_xrefs":["PMID:11387982","GOC:yaf","MetaCyc:PWY-5943","UniPathway:UPA00802","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-carotene catabolic process","synonyms":[{"name":"beta-carotene breakdown","type":"exact"},{"name":"beta-carotene catabolism","type":"exact"},{"name":"beta-carotene degradation","type":"exact"}],"termid":"GO:1901811"}


id: GO:1903854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stress response to copper ion.","definition_xrefs":["GO_REF:0000058","PMID:23437011","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of stress response to copper ion","termid":"GO:1903853"},{"relation_name":"negatively_regulates","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stress response to copper ion","synonyms":[{"name":"down regulation of response to copper ion stress","type":"exact"},{"name":"down regulation of response to copper toxicity","type":"related"},{"name":"down regulation of stress response to copper ion","type":"exact"},{"name":"down-regulation of response to copper ion stress","type":"exact"},{"name":"down-regulation of response to copper toxicity","type":"related"},{"name":"down-regulation of stress response to copper ion","type":"exact"},{"name":"downregulation of response to copper ion stress","type":"exact"},{"name":"downregulation of response to copper toxicity","type":"related"},{"name":"downregulation of stress response to copper ion","type":"exact"},{"name":"inhibition of response to copper ion stress","type":"narrow"},{"name":"inhibition of response to copper toxicity","type":"related"},{"name":"inhibition of stress response to copper ion","type":"narrow"},{"name":"negative regulation of response to copper ion stress","type":"exact"},{"name":"negative regulation of response to copper toxicity","type":"related"}],"termid":"GO:1903854"}


id: PATO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsolateral orientation","synonyms":[{"name":"dorsolaterally directed","type":"exact"}],"termid":"PATO:0002496"}


id: PBO:0062280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily I member 1","termid":"PBO:0062280"}


id: GO:0043576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory gaseous exchange","termid":"GO:0043576"}


id: GO:0102545
data:
  {"annotated_genes":["SJAG_04110","SJAG_02091","SJAG_03204","SJAG_02093"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85625,87338,109814,111982],"is_not":false,"summary":null,"term":"GO:0102545"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + a phosphatidylcholine = sn-glycero-3-phosphocholine + 2 H+ + 2 a carboxylate.","definition_xrefs":["EC:3.1.1.5","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidyl phospholipase B activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14899"],"termid":"GO:0102545","terms_by_termid":{"GO:0102545":null}}


id: PBO:0043647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 7A","termid":"PBO:0043647"}


id: FYPO:0002134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein-RNA interaction","synonyms":[{"name":"decreased RNA binding","type":"exact"},{"name":"decreased RNA-protein interaction","type":"exact"},{"name":"reduced RNA binding","type":"exact"}],"termid":"FYPO:0002134"}


id: GO:0061263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular mesangial cell in the mesonephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell development","termid":"GO:0072144"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell development","termid":"GO:0061263"}


id: PBO:0065443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 2","termid":"PBO:0065443"}


id: GO:0034577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylacetanilide + 1/2 O2 = acetanilide + acetone.","definition_xrefs":["UM-BBD_reactionID:r0914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"N-isopropylacetaniline monooxygenase activity","secondary_identifiers":["EC:1.14.15.-"],"termid":"GO:0034577"}


id: PBO:0062173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 16 pseudogene","termid":"PBO:0062173"}


id: GO:1902279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cholecystokinin signaling pathway that results in positive regulation of pancreatic amylase secretion.","definition_xrefs":["GOC:jc","GOC:TermGenie","PMID:19028687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystokinin signaling pathway","termid":"GO:0038188"},{"relation_name":"is_a","term_name":"positive regulation of pancreatic amylase secretion","termid":"GO:1902278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","synonyms":[{"name":"CCK-induced amylase release in pancreatic cell","type":"exact"},{"name":"CCK-mediated pancreatic amylase secretion","type":"exact"},{"name":"CCK-stimulated pancreatic amylase release","type":"exact"},{"name":"activation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"narrow"},{"name":"cholecystokinin-mediated pancreatic amylase secretion","type":"exact"},{"name":"up regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"up-regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"upregulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"}],"termid":"GO:1902279"}


id: PBO:0078359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-2","termid":"PBO:0078359"}


id: GO:1905625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-methionine import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17556368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-methionine import across plasma membrane","termid":"GO:1905624"},{"relation_name":"negatively_regulates","term_name":"L-methionine import across plasma membrane","termid":"GO:1905544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-methionine import across plasma membrane","termid":"GO:1905625"}


id: GO:0110159
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["PMID:27697865","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle assembly","termid":"GO:1901673"},{"relation_name":"part_of","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110159","terms_by_termid":{"GO:0110161":null}}


id: FYPO:0005314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is decreased.","definition_xrefs":["PMID:26912660","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at promoter","termid":"FYPO:0007505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at MCB promoters during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at MCB target genes during vegetative growth","type":"related"},{"name":"decreased protein localization to chromatin at MCB-containing promoters during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at MCB promoters during vegetative growth","type":"exact"}],"termid":"FYPO:0005314"}


id: GO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a mitochondrion by microautophagy.","definition_xrefs":["PMID:27003723","PMID:15798367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"},{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0007005","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"micromitophagy","termid":"GO:0000424"}


id: PBO:0079425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 8","termid":"PBO:0079425"}


id: PBO:0089421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex WD repeat subunit Sop2","termid":"PBO:0089421"}


id: PBO:0042047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 103","termid":"PBO:0042047"}


id: PBO:0079743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 10","termid":"PBO:0079743"}


id: PBO:0027849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027849"}


id: PBO:0066082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 10","termid":"PBO:0066082"}


id: GO:0010600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["PMID:18287041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of auxin metabolic process","termid":"GO:0090354"},{"relation_name":"regulates","term_name":"auxin biosynthetic process","termid":"GO:0009851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of auxin biosynthetic process","termid":"GO:0010600"}


id: PBO:0091726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, expressed in late meiosis and quiescence","termid":"PBO:0091726"}


id: PBO:0070749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 5","termid":"PBO:0070749"}


id: PBO:0070628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 12","termid":"PBO:0070628"}


id: FYPO:0003072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of primary amine oxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal primary amine oxidase activity","synonyms":[{"name":"decreased copper amine oxidase activity","type":"narrow"}],"termid":"FYPO:0003072"}


id: FYPO:0007907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal when a cell is subject to amino acid starvation.","definition_xrefs":["PMID:34805795nPomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased protein phosphorylation during amino acid starvation","termid":"FYPO:0007907"}


id: PBO:0053893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1177","termid":"PBO:0053893"}


id: GO:0019311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sorbose metabolic process","synonyms":[{"name":"sorbose metabolism","type":"exact"}],"termid":"GO:0019311"}


id: RO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"RO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","termid":"RO:0002430"}


id: PBO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase pseudogene","termid":"PBO:0002480"}


id: GO:0140056
data:
  {"annotated_genes":["SJAG_01116","SJAG_03710","SJAG_03552","SJAG_03848","SJAG_00430","SJAG_01564","SJAG_00053","SJAG_03536","SJAG_00380","SJAG_01697","SJAG_03170","SJAG_04966","SJAG_03416","SJAG_01929","SJAG_02626","SJAG_05184","SJAG_00280","SJAG_04417","SJAG_04221","SJAG_04978","SJAG_01305","SJAG_01772","SJAG_01168","SJAG_03247","SJAG_02320","SJAG_04023","SJAG_03347","SJAG_04370","SJAG_00029","SJAG_02587","SJAG_01633","SJAG_00171","SJAG_03499","SJAG_01437","SJAG_01598","SJAG_04413","SJAG_01324","SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016240"},{"annotations":[92804,71501,97061,113878,106771,85906,86936,113114,113620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[70308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[78306,102711,69949,102842,111632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990456"},{"annotations":[78625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071562"},{"annotations":[102219,110247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"},{"annotations":[89721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140057"},{"annotations":[71572,76498,104806,104955,85226,112535,95603,94816,96413,107773,103853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048278"},{"annotations":[87767,71192,113168,95544,69775,113772,86070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The process by which an organelle membrane interacts with another membrane via molecular tethers that physically bridge the two membranes and attach them to each other.","definition_xrefs":["PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane docking","termid":"GO:0022406"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01929":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02699":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03347":null,"SJAG_03416":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03710":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"organelle localization by membrane tethering","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140056","terms_by_termid":{"GO:0006904":null,"GO:0016240":null,"GO:0048211":null,"GO:0048278":null,"GO:0061817":null,"GO:0071562":null,"GO:0140057":null,"GO:1990456":null,"GO:1990854":null}}


id: GO:0019847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to inhibit neural function in another living organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotoxin activity (obsolete GO:0019847)","synonyms":[{"name":"neurotoxin activity","type":"exact"}],"termid":"GO:0019847"}


id: PBO:0018022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic septin Spn7","termid":"PBO:0018022"}


id: GO:0033206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that results in the division of the cytoplasm of a cell after meiosis, resulting in the separation of the original cell into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cytokinesis","synonyms":[{"name":"cytokinesis after meiosis","type":"exact"}],"termid":"GO:0033206"}


id: PBO:0065883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33A, member RAS oncogene family","termid":"PBO:0065883"}


id: PBO:0005461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex, non-SMC subunit Rad21 (kleisin)","termid":"PBO:0005461"}


id: GO:0004930
data:
  {"annotated_genes":["SJAG_01978","SJAG_01345","SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[92406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[83709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","Wikipedia:GPCR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001622","GO:0001624","GO:0001625","Reactome:R-HSA-114552","Reactome:R-HSA-114558","GO:0001623","GO:0016526","Reactome:R-HSA-167408"],"synonyms":[{"name":"EBV-induced receptor","type":"narrow"},{"name":"Epstein-Barr Virus-induced receptor activity","type":"narrow"},{"name":"G protein coupled receptor activity","type":"exact"},{"name":"G protein linked receptor activity","type":"exact"},{"name":"G-protein coupled receptor activity","type":"exact"},{"name":"G-protein coupled receptor activity, unknown ligand","type":"narrow"},{"name":"G-protein linked receptor activity","type":"exact"},{"name":"GPCR activity","type":"exact"},{"name":"Mas proto-oncogene receptor activity","type":"narrow"},{"name":"RDC1 receptor activity","type":"narrow"},{"name":"SREB receptor","type":"narrow"},{"name":"ligand-dependent GPCR activity","type":"exact"},{"name":"orphan G protein coupled receptor activity","type":"narrow"},{"name":"orphan G-protein coupled receptor activity","type":"narrow"},{"name":"orphan GPCR activity","type":"narrow"},{"name":"receptor activity, G-protein coupled","type":"exact"},{"name":"super conserved receptor expressed in brain receptor activity","type":"narrow"}],"termid":"GO:0004930","terms_by_termid":{"GO:0004932":null,"GO:0036320":null,"GO:1990576":null}}


id: GO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-CoA = acryloyl-CoA + NH3.","definition_xrefs":["MetaCyc:BETA-ALANYL-COA-AMMONIA-LYASE-RXN","EC:4.3.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-alanyl-CoA ammonia-lyase activity","secondary_identifiers":["RHEA:12416"],"synonyms":[{"name":"b-alanyl-CoA ammonia-lyase activity","type":"exact"},{"name":"beta-alanyl coenzyme A ammonia-lyase activity","type":"related"},{"name":"beta-alanyl-CoA ammonia-lyase (acryloyl-CoA-forming)","type":"related"}],"termid":"GO:0047698"}


id: GO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH > 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:mah","GOC:go_curators","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaline pH","termid":"GO:0010446"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkaline pH","synonyms":[{"name":"cellular response to alkalinity","type":"broad"},{"name":"cellular response to basic pH","type":"exact"}],"termid":"GO:0071469"}


id: GO:0035429
data:
  {"annotated_genes":["SJAG_04920","SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[85433],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"The process in which gluconate is transported across a membrane. Gluconate is the aldonic acid derived from glucose.","definition_xrefs":["GOC:vw","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04905":null,"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gluconate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015725"],"synonyms":[{"name":"gluconate membrane transport","type":"exact"},{"name":"gluconate transport","type":"related"}],"termid":"GO:0035429","terms_by_termid":{"GO:0035432":null,"GO:0140270":null}}


id: GO:0102907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + sesquisabinene.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"sesquisabinene synthase activity","secondary_identifiers":["MetaCyc:RXN-8622"],"termid":"GO:0102907"}


id: GO:1905865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Atg1/ULK1 kinase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:mf","GOC:autophagy","GOC:TermGenie","PMID:26567215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of Atg1/ULK1 kinase complex assembly","termid":"GO:1905864"},{"relation_name":"negatively_regulates","term_name":"Atg1/ULK1 kinase complex assembly","termid":"GO:1904745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"down regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"down regulation of ATG1 kinase complex formation","type":"exact"},{"name":"down regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"down regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"down regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"down regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"down regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"down regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"down regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"down regulation of Atg1p signalling complex formation","type":"exact"},{"name":"down regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"down regulation of ULK1 signaling complex formation","type":"exact"},{"name":"down regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"down regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"down regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"down regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"down-regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"down-regulation of ATG1 kinase complex formation","type":"exact"},{"name":"down-regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"down-regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"down-regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"down-regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"down-regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"down-regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"down-regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"down-regulation of Atg1p signalling complex formation","type":"exact"},{"name":"down-regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"down-regulation of ULK1 signaling complex formation","type":"exact"},{"name":"down-regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"down-regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"down-regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"down-regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"downregulation of ATG1 kinase complex assembly","type":"exact"},{"name":"downregulation of ATG1 kinase complex formation","type":"exact"},{"name":"downregulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"downregulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"downregulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"downregulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"downregulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"downregulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"downregulation of Atg1p signalling complex assembly","type":"exact"},{"name":"downregulation of Atg1p signalling complex formation","type":"exact"},{"name":"downregulation of ULK1 signaling complex assembly","type":"exact"},{"name":"downregulation of ULK1 signaling complex formation","type":"exact"},{"name":"downregulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"downregulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"downregulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"downregulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"inhibition of ATG1 kinase complex assembly","type":"narrow"},{"name":"inhibition of ATG1 kinase complex formation","type":"narrow"},{"name":"inhibition of ATG1-ATG13 complex assembly","type":"narrow"},{"name":"inhibition of ATG1-ATG13 complex formation","type":"narrow"},{"name":"inhibition of ATG1/ULK1 kinase complex assembly","type":"narrow"},{"name":"inhibition of ATG1/ULK1 kinase complex formation","type":"narrow"},{"name":"inhibition of ATG1/ULK1 signaling complex assembly","type":"narrow"},{"name":"inhibition of ATG1/ULK1 signaling complex formation","type":"narrow"},{"name":"inhibition of Atg1p signalling complex assembly","type":"narrow"},{"name":"inhibition of Atg1p signalling complex formation","type":"narrow"},{"name":"inhibition of ULK1 signaling complex assembly","type":"narrow"},{"name":"inhibition of ULK1 signaling complex formation","type":"narrow"},{"name":"inhibition of ULK1-ATG13-FIP200 complex assembly","type":"narrow"},{"name":"inhibition of ULK1-ATG13-FIP200 complex formation","type":"narrow"},{"name":"inhibition of ULK1-ATG13-RB1CC1 complex assembly","type":"narrow"},{"name":"inhibition of ULK1-ATG13-RB1CC1 complex formation","type":"narrow"},{"name":"negative regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"negative regulation of ATG1 kinase complex formation","type":"exact"},{"name":"negative regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"negative regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"negative regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"negative regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"negative regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"negative regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"negative regulation of Atg1p signalling complex formation","type":"exact"},{"name":"negative regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"negative regulation of ULK1 signaling complex formation","type":"exact"},{"name":"negative regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"negative regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"negative regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"negative regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1905865"}


id: MOD:01853
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine either by forming a cross-link with peptidyl-cysteine or peptidyl-serine, or by condensation with free serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine","termid":"MOD:01853"}


id: PBO:0076464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAMALIN antisense RNA 1","termid":"PBO:0076464"}


id: FYECO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which clotrimazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ clotrimazole","termid":"FYECO:0000359"}


id: GO:0050060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain alcohol + 2 NAD+ + H2O = a long-chain carboxylate + 2 NADH.","definition_xrefs":["MetaCyc:LONG-CHAIN-ALCOHOL-DEHYDROGENASE-RXN","EC:1.1.1.192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"long-chain-alcohol dehydrogenase activity","secondary_identifiers":["RHEA:17977"],"synonyms":[{"name":"fatty alcohol oxidoreductase activity","type":"related"},{"name":"long-chain alcohol dehydrogenase activity","type":"related"},{"name":"long-chain-alcohol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050060"}


id: PBO:0043102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 14","termid":"PBO:0043102"}


id: PBO:0080518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 4, pseudogene","termid":"PBO:0080518"}


id: CHEBI:17858
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione disulfide","termid":"CHEBI:17858"}


id: PBO:0003459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85 (predicted)","termid":"PBO:0003459"}


id: GO:2000312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kainate selective glutamate receptor activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0023052"],"is_obsolete":false,"name":"regulation of kainate selective glutamate receptor activity","termid":"GO:2000312"}


id: PBO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 14","termid":"PBO:0042152"}


id: PBO:0035751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tryptophan","termid":"PBO:0035751"}


id: PBO:0083365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene TRM5/YHR070W","termid":"PBO:0083365"}


id: PBO:0050033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 1","termid":"PBO:0050033"}


id: GO:0034847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: naphthyl-2-hydroxymethyl-succinyl-CoA = naphthyl-2-oxomethyl-succinyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"naphthyl-2-hydroxymethyl-succinyl-CoA dehydrogenase activity","termid":"GO:0034847"}


id: PBO:0083842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0083842"}


id: PBO:0078349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 15-1","termid":"PBO:0078349"}


id: FYPO:0002163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall thickness during vegetative growth","termid":"FYPO:0006745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002946","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell wall thickness during vegetative growth","synonyms":[{"name":"decreased cell wall thickness during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness during vegetative growth","type":"exact"},{"name":"thin cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002163"}


id: GO:0006590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones.","definition_xrefs":["GOC:jl","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone metabolic process","termid":"GO:0042403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid hormone generation","termid":"GO:0006590"}


id: PR:O74470
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C1739.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.08c","synonyms":[{"name":"Spom972h-SPCC1739.08c","type":"exact"}],"termid":"PR:O74470"}


id: PBO:0043529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordon-bleu WH2 repeat protein","termid":"PBO:0043529"}


id: GO:0047332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + diphosphate = O-phospho-L-serine + H+ + phosphate.","definition_xrefs":["EC:2.7.1.80","RHEA:23764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diphosphate-serine phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R00584","MetaCyc:2.7.1.80-RXN"],"synonyms":[{"name":"diphosphate:L-serine O-phosphotransferase activity","type":"related"},{"name":"pyrophosphate--serine phosphotransferase activity","type":"related"},{"name":"pyrophosphate-L-serine phosphotransferase activity","type":"related"}],"termid":"GO:0047332"}


id: PBO:0030591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_lysine_level","termid":"PBO:0030591"}


id: PATO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A turgor which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"turgor","termid":"PATO:0001620"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased turgor","synonyms":[{"name":"low turgor","type":"exact"}],"termid":"PATO:0001621"}


id: GO:2001080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chitosan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chitosan binding","termid":"GO:2001080"}


id: PBO:0061836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor","termid":"PBO:0061836"}


id: GO:0015099
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nickel (Ni) cations from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29831"],"synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015099","terms_by_termid":{"GO:0044750":null}}


id: PBO:0003702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II large subunit Rpb1","termid":"PBO:0003702"}


id: GO:0099077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA-binding activity that is dependent on binding to a histone.","definition_xrefs":["PMID:11691835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"histone-dependent DNA binding","termid":"GO:0099077"}


id: GO:0060006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vestibular reflex by which a response to an angular acceleration stimulus begins with an afferent nerve impulse from a receptor in the semi-circular canal and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["PMID:11784757","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular reflex","termid":"GO:0060005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angular vestibuloocular reflex","termid":"GO:0060006"}


id: PBO:0050123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 33","termid":"PBO:0050123"}


id: GO:0097316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["GOC:di","PMID:21700702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"},{"relation_name":"is_a","term_name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-acetyl-D-glucosamine","termid":"GO:0097316"}


id: FYPO:0002671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of one or more proteins released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of protein in growth medium","synonyms":[{"name":"increased concentration of proteins in growth medium","type":"exact"},{"name":"increased level of protein in growth medium","type":"exact"},{"name":"increased release of protein into growth medium","type":"related"}],"termid":"FYPO:0002671"}


id: GO:1903798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microRNA processing.","definition_xrefs":["GOC:BHF_miRNA","PMID:22269326","GOC:rph","GOC:BHF","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA processing","synonyms":[{"name":"regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"regulation of miRNA biogenesis","type":"related"},{"name":"regulation of miRNA maturation","type":"narrow"},{"name":"regulation of microRNA biogenesis","type":"related"},{"name":"regulation of microRNA biosynthesis","type":"related"},{"name":"regulation of microRNA biosynthetic process","type":"related"},{"name":"regulation of microRNA metabolic process","type":"related"},{"name":"regulation of microRNA metabolism","type":"related"},{"name":"regulation of microRNA processing","type":"broad"},{"name":"regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"}],"termid":"GO:1903798"}


id: PBO:0045361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 1","termid":"PBO:0045361"}


id: GO:1905284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:bc","GOC:BHF_miRNA","PMID:23069713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0045742"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905282"},{"relation_name":"positively_regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"activation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"activation of EGF receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"activation of EGF receptor signalling pathway involved in heart process","type":"narrow"},{"name":"activation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"activation of EGFR signaling pathway involved in heart process","type":"narrow"},{"name":"activation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"activation of ERBB1 signaling pathway involved in heart process","type":"narrow"},{"name":"activation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"activation of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"activation of epidermal growth factor receptor signalling pathway involved in heart process","type":"narrow"},{"name":"activation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"activation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"upregulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905284"}


id: PBO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 11","termid":"PBO:0062131"}


id: GO:0022613
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