# terms

id: GO:0032082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of type III restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032073"},{"relation_name":"is_a","term_name":"regulation of type III site-specific deoxyribonuclease activity","termid":"GO:0032086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type III site-specific deoxyribonuclease activity","synonyms":[{"name":"down regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type III restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type III restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type III restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032082"}


id: GO:0097196
data:
  {"annotated_genes":["SJAG_02181","SJAG_03051"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86333,98125],"is_not":false,"summary":null,"term":"GO:0097196"}]},"cv_name":"cellular_component","definition":"A protein complex involved in error-free DNA post-replication repair (PRR). In Saccharomyces cerevisiae the complex contains Csm2p, Psy3p, Shu1p, and Shu2p.","definition_xrefs":["GOC:jh","PMID:15654096","PMID:19496932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02181":null,"SJAG_03051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Shu complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097196","terms_by_termid":{"GO:0097196":null}}


id: PBO:0027548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_non-fermentable_carbon_source","termid":"PBO:0027548"}


id: GO:0004420
data:
  {"annotated_genes":["SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110966],"is_not":false,"summary":null,"term":"GO:0004420"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mevalonate + CoA + 2 NADP+ = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 H+ + 2 NADPH.","definition_xrefs":["PMID:29224355","RHEA:15989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03715":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042282","Reactome:R-HSA-191352","KEGG_REACTION:R02082","MetaCyc:1.1.1.34-RXN","EC:1.1.1.34"],"synonyms":[{"name":"3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"HMG-CoA reductase activity","type":"broad"},{"name":"hydroxymethylglutaryl-CoA reductase activity","type":"related"}],"termid":"GO:0004420","terms_by_termid":{"GO:0004420":null}}


id: PBO:0052020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction mediating and regulatory protein, p53 cofactor","termid":"PBO:0052020"}


id: PBO:0038774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T2","termid":"PBO:0038774"}


id: GO:0061582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an intestinal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell migration","termid":"GO:0061582"}


id: PBO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 15 receptor subunit alpha","termid":"PBO:0051570"}


id: PBO:0012843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-methionine (S)-S-oxide reductase MsrA","termid":"PBO:0012843"}


id: PBO:0064069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 103","termid":"PBO:0064069"}


id: PBO:0083551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verfied gene PMT5/YDL093W; YDL094C is not essential","termid":"PBO:0083551"}


id: PBO:0069835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1121, pseudogene","termid":"PBO:0069835"}


id: PBO:0060698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 6","termid":"PBO:0060698"}


id: GO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte progenitor proliferation","termid":"GO:0070445"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"negative regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070446"}


id: PBO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis and planar polarity effector complex subunit 2","termid":"PBO:0043800"}


id: PBO:0049579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone B","termid":"PBO:0049579"}


id: FYPO:0002600
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115520,115519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone modification is normal. All histone modification may be assayed, or modification of specific sites on specific histones may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal histone modification during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone modification during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002600","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0087088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L6A; N-terminally acetylated; binds 5.8S rRNA; homologous to mammalian ribosomal protein L6, no bacterial homolog; RPL6A has a paralog, RPL6B, that arose from the whole genome duplication","termid":"PBO:0087088"}


id: GO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of citric acid, 2-hydroxy-1,2,3-propanetricarboxylic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate transport","termid":"GO:0015746"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"citric acid secretion","synonyms":[{"name":"citrate secretion","type":"exact"}],"termid":"GO:0046720"}


id: PR:Q09676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.03 gene.","definition_xrefs":["UniProtKB:Q09676","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase SPAC5H10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.03","synonyms":[{"name":"Spom972h-SPAC5H10.03","type":"exact"}],"termid":"PR:Q09676"}


id: PBO:0043808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase N subunit 2","termid":"PBO:0043808"}


id: PBO:0041676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM2 antisense RNA 2","termid":"PBO:0041676"}


id: PBO:0089482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor for RhoGEF, Art1","termid":"PBO:0089482"}


id: PBO:0048577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 1","termid":"PBO:0048577"}


id: FYPO:0000177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the mitotic spindle is abnormal. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000054","FYPO:0000337","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic spindle assembly","secondary_identifiers":["FYPO:0001349"],"synonyms":[{"name":"abnormal bipolar spindle formation","type":"exact"},{"name":"abnormal mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"abnormal spindle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spindle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000177"}


id: PBO:0074012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 3","termid":"PBO:0074012"}


id: PBO:0017856
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of PNPG to glucose is 20.3(uM min-1 ml-2)","termid":"PBO:0017856"}


id: PBO:0034628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome-dependent_ATPase_activity","termid":"PBO:0034628"}


id: GO:0070893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a transposable element is incorporated into another DNA molecule such as a chromosome.","definition_xrefs":["GOC:jp","PMID:10882723"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration (obsolete GO:0070893)","termid":"GO:0070893"}


id: GO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand the binding to its receptor on the surface of a cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart","GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway involved in heart development","synonyms":[{"name":"cell surface receptor linked signaling pathway involved in heart development","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061311"}


id: PBO:0075334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORBS2 antisense RNA 1","termid":"PBO:0075334"}


id: GO:1905768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-stranded telomeric DNA binding.","definition_xrefs":["PMID:18812185","GOC:TermGenie","GOC:BHF_telomere","GO_REF:0000059","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomeric DNA binding","termid":"GO:1904743"},{"relation_name":"is_a","term_name":"regulation of double-stranded telomeric DNA binding","termid":"GO:1905767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of double-stranded telomeric DNA binding","synonyms":[{"name":"down regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"down-regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"downregulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"inhibition of double-stranded telomeric DNA binding","type":"narrow"}],"termid":"GO:1905768"}


id: GO:0061595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 6-deoxy-6-sulfofructose-1-phosphate = 3-sulfolactaldehyde + dihydroxyacetone phosphate.","definition_xrefs":["PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"6-deoxy-6-sulfofructose-1-phosphate aldolase activity","termid":"GO:0061595"}


id: PBO:0053504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 487","termid":"PBO:0053504"}


id: FYPO:0006152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of SUMO-specific protease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal SUMO-specific protease activity","termid":"FYPO:0006151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased SUMO-specific protease activity","synonyms":[{"name":"reduced SUMO-specific protease activity","type":"exact"}],"termid":"FYPO:0006152"}


id: PBO:0068942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 185, pseudogene","termid":"PBO:0068942"}


id: PBO:0087416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 6 of the ubiquinol cytochrome-c reductase complex; the complex, also known as the cytochrome bc(1) complex or Complex III, is a component of the mitochondrial inner membrane electron transport chain; highly acidic protein; required for maturation of cytochrome c1; may be loosely associated with the complex since it is easily released into the intermembrane space","termid":"PBO:0087416"}


id: GO:1903175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fatty alcohol.","definition_xrefs":["GO_REF:0000068","PMID:24036493","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fatty alcohol biosynthetic process","synonyms":[{"name":"fatty alcohol anabolism","type":"exact"},{"name":"fatty alcohol biosynthesis","type":"exact"},{"name":"fatty alcohol formation","type":"exact"},{"name":"fatty alcohol synthesis","type":"exact"}],"termid":"GO:1903175"}


id: PBO:0048388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0048388"}


id: GO:0070020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that consists of a dimeric transforming growth factor beta (TGF-beta) type II receptor bound to a TGF-beta1 dimer.","definition_xrefs":["Reactome:R-HSA-170865"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta1-type II receptor complex (obsolete GO:0070020)","synonyms":[{"name":"TGF-beta receptor II-TGF-beta1 complex","type":"exact"},{"name":"TGF-beta1-type II receptor complex","type":"exact"}],"termid":"GO:0070020"}


id: GO:0033460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033460"}


id: GO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cystine reductase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cystine reductase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cystine reductase","type":"exact"}],"termid":"GO:0019455"}


id: GO:0102434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 10-formyltetrahydrofolate-4a-carbinolamine = H2O + a 10-formyldihydrofolate.","definition_xrefs":["PMID:20959559","PMID:18245455","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"pterin-4alpha-carbinolamine dehydratase activity","secondary_identifiers":["MetaCyc:RXN-13908"],"termid":"GO:0102434"}


id: PBO:0082195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alkaline dihydroceramidase, involved in sphingolipid metabolism; preferentially hydrolyzes dihydroceramide to a free fatty acid and dihydrosphingosine; has a minor reverse activity; YDC1 has a paralog, YPC1, that arose from the whole genome duplication","termid":"PBO:0082195"}


id: FYPO:0007129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homoserine O-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal homoserine O-acetyltransferase activity","termid":"FYPO:0007129"}


id: PBO:0069771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1054, pseudogene","termid":"PBO:0069771"}


id: PBO:0080754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine ligand 2","termid":"PBO:0080754"}


id: FYPO:0006634
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115596,115608,115702],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115375],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length, i.e. the maximum distance between the cell ends, is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null,"SJAG_04332":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"increased vegetative cell length","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_00266","SJAG_02592","SJAG_04312"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta"],"synonyms":[{"name":"increased cell length during vegetative growth","type":"exact"},{"name":"increased vegetative cell length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006634","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO:0001122":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: GO:1904482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetrahydrofolate stimulus.","definition_xrefs":["PMID:24698160","GOC:TermGenie","GOC:BHF","GO_REF:0000071","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to tetrahydrofolate","termid":"GO:1904481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tetrahydrofolate","termid":"GO:1904482"}


id: GO:0080126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ovary septum over time, from its formation to the mature structure. The ovary septum is the thin partition that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s).","definition_xrefs":["PMID:17855426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant septum development","termid":"GO:1905328"},{"relation_name":"part_of","term_name":"plant-type ovary development","termid":"GO:0035670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovary septum development","termid":"GO:0080126"}


id: PATO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's not having undulating edges forming lobes.","definition_xrefs":["PATOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alobate","termid":"PATO:0002506"}


id: PR:O74991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof3 gene.","definition_xrefs":["UniProtKB:O74991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/TPR repeat protein pof3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.16","synonyms":[{"name":"Spom972h-pof3","type":"exact"}],"termid":"PR:O74991"}


id: GO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"}],"termid":"GO:0051940"}


id: PBO:0086169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for Stt4-containing PI kinase complex localization; required for Stt4-containing phosphoinositide (PI) kinase patch assembly at plasma membrane; recruited to plasma membrane via conserved basic patch near N-terminus; exhibits synthetic lethal genetic interactions with PHO85; mutations in human homolog EFR3A implicated in autism spectrum disorders","termid":"PBO:0086169"}


id: PBO:0076459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAL bHLH transcription factor 2","termid":"PBO:0076459"}


id: GO:0043802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamine + 2 ATP + 2 H2O + hydrogenobyrinate = 2 L-glutamate + 2 ADP + 4 H+ + hydrogenobyrinate a,c-diamide + 2 phosphate.","definition_xrefs":["EC:6.3.5.9","RHEA:12544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) activity","secondary_identifiers":["KEGG_REACTION:R05224","MetaCyc:R341-RXN"],"synonyms":[{"name":"CobB","type":"related"},{"name":"hydrogenobyrinic acid a,c diamide synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"hydrogenobyrinic-acid:L-glutamine amido-ligase (AMP-forming)","type":"exact"}],"termid":"GO:0043802"}


id: FYPO:0003891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PomBase:mah","PMID:11104907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intragenic meiotic recombination","synonyms":[{"name":"normal meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0003891"}


id: PBO:0069909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1200, pseudogene","termid":"PBO:0069909"}


id: PBO:0081115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 4","termid":"PBO:0081115"}


id: PBO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Vip1","termid":"PBO:0000846"}


id: GO:0030507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"spectrin binding","termid":"GO:0030507"}


id: GO:1905093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diosgenin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:25765596","GOC:BHF_miRNA","GO_REF:0000071","GOC:BHF","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to sterol","termid":"GO:0036315"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to diosgenin","termid":"GO:1905092"},{"relation_name":"is_a","term_name":"cellular response to triterpenoid","termid":"GO:1905837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diosgenin","termid":"GO:1905093"}


id: PBO:0028778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028778"}


id: PR:O74835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RRP5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23270:SF0","PRO:DNx","OMA:SCHPO04382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA biogenesis protein rrp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.07","secondary_identifiers":["UniProtKB:O74835"],"synonyms":[{"name":"Spom972h-PDCD11","type":"exact"},{"name":"U3 small nucleolar RNA-associated protein rrp5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein rrp5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosomal RNA-processing protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74835"}


id: PBO:0045342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 2","termid":"PBO:0045342"}


id: GO:0051222
data:
  {"annotated_genes":["SJAG_02592","SJAG_00906","SJAG_01805","SJAG_03453","SJAG_01245","SJAG_04464","SJAG_03048","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[89440,96205,97642,106962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86382,98180,90008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein transport","type":"narrow"},{"name":"stimulation of protein transport","type":"narrow"},{"name":"up regulation of protein transport","type":"exact"},{"name":"up-regulation of protein transport","type":"exact"},{"name":"upregulation of protein transport","type":"exact"}],"termid":"GO:0051222","terms_by_termid":{"GO:0042307":null,"GO:0046827":null,"GO:0070863":null}}


id: GO:1990608
data:
  {"annotated_genes":["SJAG_01460","SJAG_01422","SJAG_04558","SJAG_02332","SJAG_03200","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85651,99285],"is_not":false,"summary":null,"term":"GO:1990608"},{"annotations":[96364,107397,85650,99284,108842,98627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which a mitotic spindle pole body is transported to, or maintained in, a specific cellular location.","definition_xrefs":["PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body localization","termid":"GO:0070631"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070632","GO:0071789"],"synonyms":[{"name":"establishment and maintenance of spindle pole body localization","type":"exact"},{"name":"establishment of spindle pole body localisation","type":"narrow"},{"name":"establishment of spindle pole body localization","type":"narrow"},{"name":"mitotic spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body docking","type":"narrow"},{"name":"spindle pole body localisation in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body positioning","type":"narrow"}],"termid":"GO:1990608","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: GO:0009955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which differences in cell differentiation along the adaxial/abaxial are generated. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial pattern specification","synonyms":[{"name":"adaxial/abaxial pattern formation","type":"related"}],"termid":"GO:0009955"}


id: GO:0031465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4B subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by unknown subunits.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cul4-RING E3 ubiquitin ligase complex","termid":"GO:0080008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul4B-RING E3 ubiquitin ligase complex","synonyms":[{"name":"cullin-RING ligase 4B","type":"exact"}],"termid":"GO:0031465"}


id: GO:1903133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tube lumen cavitation.","definition_xrefs":["PMID:22898778","GO_REF:0000058","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of tube lumen cavitation","termid":"GO:1903132"},{"relation_name":"negatively_regulates","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tube lumen cavitation","synonyms":[{"name":"inhibition of tube lumen cavitation","type":"narrow"}],"termid":"GO:1903133"}


id: GO:0045321
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83811],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0050870"}]},"cv_name":"biological_process","definition":"A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte activation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Immunologic_activation"],"synonyms":[{"name":"immune cell activation","type":"exact"},{"name":"leucocyte activation","type":"exact"}],"termid":"GO:0045321","terms_by_termid":{"GO:0050870":null}}


id: GO:0050649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + donor-H2 + O2 = 6-beta-hydroxytestosterone + H2O.","definition_xrefs":["PMID:11726664","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"testosterone 6-beta-hydroxylase activity","synonyms":[{"name":"testosterone 6b-hydroxylase activity","type":"exact"}],"termid":"GO:0050649"}


id: PBO:0065177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROP paired-like homeobox 1","termid":"PBO:0065177"}


id: PATO:0000571
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000571 absolute length value (obsolete PATO:0000571)","termid":"PATO:0000571"}


id: PBO:0075254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 7","termid":"PBO:0075254"}


id: FYPO:0006248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is increased during mitosis. Normally, centromere-kinetochore complexes cluster near the old spindle pole body during interphase of the mitotic cell cycle, but are not as tightly clustered during mitosis.","definition_xrefs":["PMID:28825727","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere clustering at nuclear periphery","termid":"FYPO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased centromere clustering at nuclear periphery during mitosis","synonyms":[{"name":"increased centromere clustering at SPB during mitosis","type":"related"},{"name":"increased centromere clustering at nuclear periphery during M phase of mitotic cell cycle","type":"related"},{"name":"increased centromere clustering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased centromere clustering at old mitotic spindle pole body during mitosis","type":"related"},{"name":"increased centromere clustering at spindle pole body during mitosis","type":"related"},{"name":"increased centromere-SPB clustering during mitosis","type":"related"},{"name":"increased inter-centromere connection during mitosis","type":"exact"},{"name":"increased kinetochore clustering at SPB during mitosis","type":"related"},{"name":"increased kinetochore clustering at old mitotic spindle pole body during mitosis","type":"related"},{"name":"increased kinetochore clustering at spindle pole body during mitosis","type":"related"},{"name":"increased kinetochore localization at spindle pole body during mitosis","type":"related"},{"name":"increased kinetochores to spindle pole body clustering during mitosis","type":"related"},{"name":"increased mitotic centromere clustering at nuclear periphery during mitosis","type":"exact"}],"termid":"FYPO:0006248"}


id: PR:Q9P7E3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SAM decarboxylase proenzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase proenzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.05c","secondary_identifiers":["UniProtKB:Q9P7E3"],"synonyms":[{"name":"AdoMetDC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SAMDC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMD1","type":"exact"}],"termid":"PR:Q9P7E3"}


id: PBO:0058095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4311","termid":"PBO:0058095"}


id: GO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, compact region of heterochromatin located in the middle of the polytene chromosome chromocenter, which undergoes little or no replication during polytenization.","definition_xrefs":["PMID:8878678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha-heterochromatin","termid":"GO:0005723"}


id: GO:0016650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or similar compound, disulfide, NAD, NADP, oxygen or a flavin.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH group of donors, other acceptors (obsolete GO:0016650)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016650"}


id: PBO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 31","termid":"PBO:0070660"}


id: PBO:0016570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin, mitochondrial membrane organization protein (predicted)","termid":"PBO:0016570"}


id: PBO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase (predicted)","termid":"PBO:0002446"}


id: PBO:0005029
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.99.1.1","termid":"PBO:0005029"}


id: GO:1902869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amacrine cell differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","PMID:16872597","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"amacrine cell differentiation","termid":"GO:0035881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amacrine cell differentiation","synonyms":[{"name":"regulation of amacrine neuron differentiation","type":"exact"}],"termid":"GO:1902869"}


id: PBO:0085198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein and component of the Ctf19 complex; involved in the establishment of pericentromeric cohesion during mitosis; prevents non-disjunction of sister chromatids during meiosis II; forms a stable complex with Chl4p; required for localization of Sgo1p to pericentric sites during meiosis I; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-L and fission yeast fta1","termid":"PBO:0085198"}


id: GO:0035461
data:
  {"annotated_genes":["SJAG_02962","SJAG_05175","SJAG_00835","SJAG_03503","SJAG_03652","SJAG_03808","SJAG_04673","SJAG_02152","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[103465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904947"},{"annotations":[99475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[104205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[85658,85659,114837,113557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[114838,85660,113558,85661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[113559,85663,85662,114839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[96447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[85665,96448,85664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The process in which a vitamin is transported across a membrane. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02152":null,"SJAG_02779":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vitamin transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vitamin membrane transport","type":"exact"}],"termid":"GO:0035461","terms_by_termid":{"GO:0071934":null,"GO:0098717":null,"GO:0140125":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1904947":null,"GO:1905135":null,"GO:1990545":null}}


id: GO:0018127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + L-serine = nicotinamide + N2-(ADP-D-ribosyl)-L-serine.","definition_xrefs":["EC:2.4.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"NAD(P)-serine ADP-ribosyltransferase activity","termid":"GO:0018127"}


id: PBO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh repeats","termid":"PBO:0000054"}


id: GO:0043145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The endonucleolytic cleavage of snoRNA 3' ends, which is required for mature snoRNAs to be functional.","definition_xrefs":["PMID:12773397","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"sno(s)RNA 3'-end cleavage","synonyms":[{"name":"sRNA 3'-end cleavage","type":"narrow"},{"name":"sno(s)RNA 3' end cleavage","type":"exact"},{"name":"snoRNA 3'-end cleavage","type":"narrow"}],"termid":"GO:0043145"}


id: GO:0004602
data:
  {"annotated_genes":["SJAG_01216","SJAG_05181","SJAG_01292","SJAG_04632"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58610,84912,93671,95024],"is_not":false,"summary":null,"term":"GO:0004602"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + hydrogen peroxide = oxidized glutathione + 2 H2O.","definition_xrefs":["PMID:36771108","EC:1.11.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01216":null,"SJAG_01292":null,"SJAG_04632":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glutathione peroxidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3323013","Reactome:R-HSA-3341277","MetaCyc:GLUTATHIONE-PEROXIDASE-RXN","Reactome:R-HSA-2161946","Reactome:R-HSA-3341397","Reactome:R-HSA-71676","RHEA:16833","GO:0016224","Reactome:R-HSA-3343700","Reactome:R-HSA-2161999","Reactome:R-HSA-6799695","Reactome:R-HSA-2161791","Reactome:R-HSA-2161959"],"synonyms":[{"name":"GSH peroxidase activity","type":"related"},{"name":"glutathione:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"reduced glutathione peroxidase activity","type":"related"},{"name":"selenium-glutathione peroxidase activity","type":"related"}],"termid":"GO:0004602","terms_by_termid":{"GO:0004602":null}}


id: GO:0007419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral cord over time, from its formation to the mature structure. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms.","definition_xrefs":["GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral cord development","termid":"GO:0007419"}


id: GO:0102934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: germacra-1(10),4,11(13)-trien-12-oate + O2 + NADPH + 2 H+ = costunolide + 2 H2O + NADP.","definition_xrefs":["GOC:pz","RHEA:28230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"costunolide synthase activity","secondary_identifiers":["EC:1.14.14.150","MetaCyc:RXN-8971"],"termid":"GO:0102934"}


id: PBO:0060167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTSS I-BAR domain containing 1","termid":"PBO:0060167"}


id: PR:P04909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:19965387","PomBase:MAH","PMID:21516229","PMID:15226425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha","termid":"PR:000027558"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.08c","secondary_identifiers":["PR:000027559","UniProtKB:P04909"],"synonyms":[{"name":"SPCC622.08C","type":"related"},{"name":"Spom972h-hta1","type":"exact"}],"termid":"PR:P04909"}


id: PBO:0086293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in maintaining mitochondrial morphology; also involved in maintaining normal cardiolipin levels; mitochondrial inner membrane protein; proposed to be involved in N-acylethanolamine metabolism; related to mammalian N-acylPE-specific phospholipase D","termid":"PBO:0086293"}


id: GO:0032325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"}


id: GO:0180027
data:
  {"annotated_genes":["SJAG_03657","SJAG_03345","SJAG_04612","SJAG_05022"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83262,84763,99234,108999],"is_not":false,"summary":null,"term":"GO:0180027"}]},"cv_name":"biological_process","definition":"A protein quality control pathway that removes ubiquitinated proteins from the nuclear inner membrane before transferring them to the proteasome for degradation.","definition_xrefs":["PMID:37694715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein quality control by the ubiquitin-proteasome system","termid":"GO:0071630"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_03657":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"inner nuclear membrane-associated protein degradation pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"INMAD pathway","type":"exact"}],"termid":"GO:0180027","terms_by_termid":{"GO:0180027":null}}


id: GO:0033957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages in the backbone of lambda-carrageenan, resulting in the tetrasaccharide alpha-D-Galp2,6S2-(1->3)-beta-D-Galp2S-(1->4)-alpha-D-Galp2,6S2-(1->3)-D-Galp2S.","definition_xrefs":["EC:3.2.1.162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"lambda-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.162-RXN"],"synonyms":[{"name":"endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase activity","type":"related"}],"termid":"GO:0033957"}


id: GO:1904592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein refolding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11360998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein refolding","termid":"GO:0061083"},{"relation_name":"is_a","term_name":"positive regulation of protein folding","termid":"GO:1903334"},{"relation_name":"positively_regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein refolding","synonyms":[{"name":"activation of heat shock protein activity","type":"related"},{"name":"activation of protein refolding","type":"narrow"},{"name":"positive regulation of heat shock protein activity","type":"related"},{"name":"up regulation of heat shock protein activity","type":"related"},{"name":"up regulation of protein refolding","type":"exact"},{"name":"up-regulation of heat shock protein activity","type":"related"},{"name":"up-regulation of protein refolding","type":"exact"},{"name":"upregulation of heat shock protein activity","type":"related"},{"name":"upregulation of protein refolding","type":"exact"}],"termid":"GO:1904592"}


id: PBO:0073390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 5","termid":"PBO:0073390"}


id: PBO:0080322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 86 pseudogene","termid":"PBO:0080322"}


id: PBO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_location","termid":"PBO:0034277"}


id: GO:2001310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["PMID:17574915","PMID:16333108","PMID:29966253","GOC:di","PMID:18272357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"gliotoxin biosynthetic process","synonyms":[{"name":"gliotoxin anabolism","type":"exact"},{"name":"gliotoxin biosynthesis","type":"exact"},{"name":"gliotoxin formation","type":"exact"},{"name":"gliotoxin synthesis","type":"exact"}],"termid":"GO:2001310"}


id: FYPO:0006409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell is higher than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular nitric oxide level during stationary phase","synonyms":[{"name":"increased cellular NO level during stationary phase","type":"exact"},{"name":"increased cellular nitric oxide level in stationary phase","type":"exact"},{"name":"increased nitric oxide accumulation during stationary phase","type":"related"}],"termid":"FYPO:0006409"}


id: GO:0098628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphate residues from peptidyl-N-phospho-arginine to form peptidyl-arginine.","definition_xrefs":["PMID:23770242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-N-phospho-arginine dephosphorylation","termid":"GO:0098628"}


id: GO:1904113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["PMID:25717181","GOC:TermGenie","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of muscle filament sliding","synonyms":[{"name":"down regulation of muscle filament sliding","type":"exact"},{"name":"down-regulation of muscle filament sliding","type":"exact"},{"name":"downregulation of muscle filament sliding","type":"exact"},{"name":"inhibition of muscle filament sliding","type":"narrow"}],"termid":"GO:1904113"}


id: PBO:0002732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein involved in respiratory growth Cmc4","termid":"PBO:0002732"}


id: PBO:0087854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator; required for the vitamin H-responsive element (VHRE) mediated induction of VHT1 (Vitamin H transporter) and BIO5 (biotin biosynthesis intermediate transporter) in response to low biotin concentrations; VHR1 has a paralog, VHR2, that arose from the whole genome duplication","termid":"PBO:0087854"}


id: PBO:0017042
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PantoThenate Kinase","termid":"PBO:0017042"}


id: PBO:0017982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase II-associated deadenylation-dependent mRNA-decapping factor Pdc2 (predicted)","termid":"PBO:0017982"}


id: PBO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase Leu2 (predicted)","termid":"PBO:0002516"}


id: GO:0032006
data:
  {"annotated_genes":["SJAG_04235","SJAG_05030","SJAG_02231","SJAG_03089","SJAG_01184","SJAG_00209","SJAG_03720","SJAG_03799","SJAG_03928","SJAG_01032","SJAG_03678","SJAG_02605","SJAG_06588","SJAG_05346","SJAG_00991","SJAG_00169","SJAG_04249","SJAG_03355","SJAG_00824","SJAG_00143","SJAG_00457","SJAG_01187","SJAG_02765","SJAG_03405","SJAG_03486","SJAG_00688","SJAG_00561","SJAG_03371","SJAG_03501","SJAG_00289","SJAG_05184","SJAG_04496","SJAG_04206","SJAG_03907","SJAG_04910","SJAG_02424","SJAG_01142","SJAG_03072","SJAG_00875","SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[94618,106907,95308,88944,97236,110638,100977,89805,91786,105194,83490,109183,112323,112217,103294,105615,98822,110038,103040,113140,114310,112572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[112362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[102456,100978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[108861,83491,89955,103041,84927,114456,83789,91787,93728,105195,106487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[86722,93462,102885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"},{"annotations":[103757,113888,100979,111541,88504,89693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00289":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_03907":null,"SJAG_03928":null,"SJAG_04206":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_05346":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of TOR signaling cascade","type":"related"},{"name":"regulation of TOR signaling pathway","type":"exact"},{"name":"regulation of TOR signalling pathway","type":"exact"},{"name":"regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"regulation of target of rapamycin signalling pathway","type":"exact"}],"termid":"GO:0032006","terms_by_termid":{"GO:0032007":null,"GO:0032008":null,"GO:1903432":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null}}


id: PBO:0050259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 37","termid":"PBO:0050259"}


id: FYPO:0004142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["GO:0000978","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000653"],"is_obsolete":false,"name":"decreased RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"decreased transcription factor binding to promoter region","type":"related"},{"name":"reduced RNA polymerase II proximal promoter sequence-specific DNA binding","type":"exact"}],"termid":"FYPO:0004142"}


id: GO:0006064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucuronate, any salt or ester of glucuronic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"glucuronate catabolic process","synonyms":[{"name":"glucuronate breakdown","type":"exact"},{"name":"glucuronate catabolism","type":"exact"},{"name":"glucuronate degradation","type":"exact"}],"termid":"GO:0006064"}


id: PBO:0071555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 20","termid":"PBO:0071555"}


id: PBO:0058100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4315-2","termid":"PBO:0058100"}


id: PBO:0028931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028931"}


id: GO:0099590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the internalization of a neurotransmitter receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor internalization","termid":"GO:0099590"}


id: PBO:0055639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3078","termid":"PBO:0055639"}


id: GO:1900786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of naphtho-gamma-pyrone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone metabolic process","termid":"GO:1900785"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"naphtho-gamma-pyrone catabolic process","synonyms":[{"name":"naphtho-gamma-pyrone breakdown","type":"exact"},{"name":"naphtho-gamma-pyrone catabolism","type":"exact"},{"name":"naphtho-gamma-pyrone degradation","type":"exact"},{"name":"naphtho-gamma-pyrones breakdown","type":"related"},{"name":"naphtho-gamma-pyrones catabolic process","type":"related"},{"name":"naphtho-gamma-pyrones catabolism","type":"related"},{"name":"naphtho-gamma-pyrones degradation","type":"related"}],"termid":"GO:1900786"}


id: SO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat_region containing repeat_units of 1 bp that is repeated multiple times in tandem.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric_repeat","synonyms":[{"name":"monomeric repeat","type":"exact"}],"termid":"SO:0001934"}


id: PBO:0057852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3163","termid":"PBO:0057852"}


id: GO:0120026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host cell membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively.","definition_xrefs":["PMID:24965475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell projection","termid":"GO:0044157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell uropod","synonyms":[{"name":"host cell uropodium","type":"exact"}],"termid":"GO:0120026"}


id: GO:0007455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the eye-antennal disc are generated and organized. This includes the transformation of an eye-antennal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the eye, antenna, head capsule and maxillary palps.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye-antennal disc morphogenesis","synonyms":[{"name":"eye-antennal disc metamorphosis","type":"exact"}],"termid":"GO:0007455"}


id: PBO:0057251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 451b","termid":"PBO:0057251"}


id: PBO:0034623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow","termid":"PBO:0034623"}


id: PBO:0063654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 11","termid":"PBO:0063654"}


id: GO:1901586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of acid-sensing ion channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of acid-sensing ion channel activity (obsolete GO:1901586)","synonyms":[{"name":"down regulation of ASIC activity","type":"exact"},{"name":"down regulation of acid-sensing ion channel activity","type":"exact"},{"name":"down-regulation of ASIC activity","type":"exact"},{"name":"down-regulation of acid-sensing ion channel activity","type":"exact"},{"name":"downregulation of ASIC activity","type":"exact"},{"name":"downregulation of acid-sensing ion channel activity","type":"exact"},{"name":"inhibition of ASIC activity","type":"exact"},{"name":"inhibition of acid-sensing ion channel activity","type":"narrow"},{"name":"negative regulation of ASIC activity","type":"exact"}],"termid":"GO:1901586"}


id: PBO:0073148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog A pseudogene 1","termid":"PBO:0073148"}


id: FYPO:0003645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein serine phosphorylation during vegetative growth (obsolete FYPO:0003645)","synonyms":[{"name":"normal peptidyl-serine phosphorylation during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003645"}


id: PBO:0070110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 24 pseudogene","termid":"PBO:0070110"}


id: PATO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000005 absolute activity (obsolete PATO:0000005)","termid":"PATO:0000005"}


id: PBO:0030278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_population_growth_rate","termid":"PBO:0030278"}


id: FYPO:0004327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to sorbitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to sorbitol","synonyms":[{"name":"normal protein phosphorylation during cellular response to sorbitol during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to sorbitol during vegetative growth","type":"exact"}],"termid":"FYPO:0004327"}


id: PBO:0089330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain-containing protein Tlc4","termid":"PBO:0089330"}


id: PBO:0059411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 1","termid":"PBO:0059411"}


id: GO:1901871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecgonone methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"ecgonone methyl ester metabolic process","termid":"GO:1901870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ecgonone methyl ester catabolic process","synonyms":[{"name":"ecgonone methyl ester breakdown","type":"exact"},{"name":"ecgonone methyl ester catabolism","type":"exact"},{"name":"ecgonone methyl ester degradation","type":"exact"}],"termid":"GO:1901871"}


id: PBO:0028617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2_snRNP_binding","termid":"PBO:0028617"}


id: PBO:0066928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 230","termid":"PBO:0066928"}


id: PBO:0077128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulointerstitial nephritis antigen like 1","termid":"PBO:0077128"}


id: PBO:0069082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 329, pseudogene","termid":"PBO:0069082"}


id: PBO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 7","termid":"PBO:0072069"}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: PR:Q9USS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysophosphatidic acid phosphatase type 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase SPBC4.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.06","secondary_identifiers":["UniProtKB:Q9USS6"],"synonyms":[{"name":"Spom972h-ACP6","type":"exact"}],"termid":"PR:Q9USS6"}


id: PBO:0076094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 1A","termid":"PBO:0076094"}


id: GO:0034579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + n-hexane = (1-methylpentyl)succinate.","definition_xrefs":["UM-BBD_reactionID:r0920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(1-methylpentyl)succinate synthase activity","termid":"GO:0034579"}


id: PBO:0063853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol binding clathrin assembly protein","termid":"PBO:0063853"}


id: PBO:0078815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophinin associated protein","termid":"PBO:0078815"}


id: GO:1904706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell proliferation","termid":"GO:0048662"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"down regulation of VSMC proliferation","type":"exact"},{"name":"down regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of VSMC proliferation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of VSMC proliferation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of VSMC proliferation","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of VSMC proliferation","type":"exact"},{"name":"negative regulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904706"}


id: PBO:0069002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 246, pseudogene","termid":"PBO:0069002"}


id: GO:1904399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparan sulfate.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:8567685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heparan sulfate binding","termid":"GO:1904399"}


id: FYPO:0004495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, has more than one septum, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable branched, elongated, multiseptate vegetative cell","termid":"FYPO:0003413"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"},{"relation_name":"is_a","term_name":"inviable swollen elongated multiseptate vegetative cell","termid":"FYPO:0006946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000032","FYPO:0000002","FYPO:0000004","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"inviable branched, swollen, elongated, multiseptate vegetative cell","synonyms":[{"name":"inviable branched, elongated, swollen, multiseptate vegetative cell","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; branched, swollen, elongated, multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0004495"}


id: PBO:0060067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 14","termid":"PBO:0060067"}


id: GO:0002616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"}


id: FYPO:0005233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to an MCM complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the MCM complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PMID:12604790","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal MCM complex binding","termid":"FYPO:0005233"}


id: PBO:0048407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated kinase 1A","termid":"PBO:0048407"}


id: PBO:0060296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 4","termid":"PBO:0060296"}


id: PBO:0087364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific exo-1,3-beta-glucanase; contributes to ascospore thermoresistance; SPR1 has a paralog, EXG1, that arose from the whole genome duplication","termid":"PBO:0087364"}


id: GO:0004619
data:
  {"annotated_genes":["SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90678],"is_not":false,"summary":null,"term":"GO:0004619"},{"annotations":[90677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046538"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate.","definition_xrefs":["RHEA:15901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"phosphoglycerate mutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71654","Reactome:R-HSA-71445"],"synonyms":[{"name":"D-phosphoglycerate 2,3-phosphomutase activity","type":"related"},{"name":"PGA mutase activity","type":"related"},{"name":"PGAM activity","type":"related"},{"name":"PGM","type":"exact"},{"name":"phosphoglycerate phosphomutase activity","type":"related"},{"name":"phosphoglyceromutase activity","type":"related"}],"termid":"GO:0004619","terms_by_termid":{"GO:0004619":null,"GO:0046538":null}}


id: PBO:0086640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YDR476C is not an essential gene","termid":"PBO:0086640"}


id: FYPO:0003245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the daughter nuclei formed by mitosis cluster in the middle of the cell during telophase. Normally, daughter nuclei move away from the cell division site during mitotic telophase.","definition_xrefs":["PMID:23087209","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"},{"relation_name":"output_of","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"telophase nuclear clustering","synonyms":[{"name":"daughter nuclei clustered at cell division site during mitotic telophase","type":"exact"},{"name":"kissing nuclei","type":"exact"},{"name":"nuclear clustering during mitotic telophase","type":"exact"},{"name":"nuclei clustered at cell division site during mitotic telophase","type":"exact"},{"name":"telophase nuclear clustering during vegetative growth","type":"related"}],"termid":"FYPO:0003245"}


id: PBO:0074324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ArfGAP2","termid":"PBO:0074324"}


id: PBO:0076293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin binding cytoplasmic RNA interacting protein","termid":"PBO:0076293"}


id: PBO:0058444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5009","termid":"PBO:0058444"}


id: PBO:0081681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 602, pseudogene","termid":"PBO:0081681"}


id: GO:0102115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-gamma-D-isoglutaminyl-N-(beta-D-asparatyl)-L-lysyl-D-alanyl-D-alanine + ammonium + ATP = H+ + ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-gamma-D-isoglutaminyl-N-(beta-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"peptidoglycan asparagine synthase activity","secondary_identifiers":["MetaCyc:RXN-11338"],"termid":"GO:0102115"}


id: PBO:0076115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18 pseudogene 1","termid":"PBO:0076115"}


id: PBO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_nucleation","termid":"PBO:0035785"}


id: PBO:0039311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 5, RNA demethylase","termid":"PBO:0039311"}


id: GO:1905193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chloroplast fission.","definition_xrefs":["PMID:26862170","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of chloroplast fission","termid":"GO:1905192"},{"relation_name":"negatively_regulates","term_name":"chloroplast fission","termid":"GO:0010020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chloroplast fission","synonyms":[{"name":"down regulation of chloroplast division","type":"exact"},{"name":"down regulation of chloroplast fission","type":"exact"},{"name":"down-regulation of chloroplast division","type":"exact"},{"name":"down-regulation of chloroplast fission","type":"exact"},{"name":"downregulation of chloroplast division","type":"exact"},{"name":"downregulation of chloroplast fission","type":"exact"},{"name":"inhibition of chloroplast division","type":"narrow"},{"name":"inhibition of chloroplast fission","type":"narrow"},{"name":"negative regulation of chloroplast division","type":"exact"}],"termid":"GO:1905193"}


id: PBO:0075039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-2","termid":"PBO:0075039"}


id: PR:Q9USK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C4B3.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.13","synonyms":[{"name":"Spom972h-SPCC4B3.13","type":"exact"}],"termid":"PR:Q9USK3"}


id: PR:Q92356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle-associated membrane protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01364","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptobrevin homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.11","secondary_identifiers":["UniProtKB:Q92356"],"synonyms":[{"name":"Spom972h-VAMP4","type":"exact"}],"termid":"PR:Q92356"}


id: PBO:0076676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 1","termid":"PBO:0076676"}


id: GO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular fiber found in the flagella of mammalian sperm that surrounds the nine microtubule doublets. These dense fibers are stiff and noncontractile. In human, they consist of about 10 major and at least 15 minor proteins, where all major proteins are ODF1, ODF2 or ODF2-related proteins.","definition_xrefs":["PMID:21586547","PMID:25361759","GOC:cilia","ISBN:0824072820","GOC:krc","PMID:10381817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer dense fiber","synonyms":[{"name":"outer dense fibre","type":"exact"}],"termid":"GO:0001520"}


id: GO:0090348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular organohalogen metabolic process","termid":"GO:0090347"},{"relation_name":"regulates","term_name":"cellular organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular organofluorine metabolic process","termid":"GO:0090348"}


id: GO:0055082
data:
  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id: GO:0180019
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  {"annotated_genes":["SJAG_04259","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97113,109827],"is_not":false,"summary":null,"term":"GO:0180019"}]},"cv_name":"cellular_component","definition":"A kinetochore subcomplex that binds to centromeric chromatin and forms part of the outer kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans and yeast respectively, it consists of KNL1/Spc105p and ZWINT/Kre28p.","definition_xrefs":["PMID:27881301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0000776"],"is_obsolete":false,"name":"Knl1/Spc105 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180019","terms_by_termid":{"GO:0180019":null}}


id: PBO:0050161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 17","termid":"PBO:0050161"}


id: PBO:0055458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2890","termid":"PBO:0055458"}


id: PBO:0040221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATCAY kinesin light chain interacting caytaxin","termid":"PBO:0040221"}


id: FYPO:0004238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K4 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004238"}


id: GO:0008450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of O-sialoglycoproteins; cleaves the -Arg31-Asp32- bond in glycophorin A. Does not cleave unglycosylated proteins, desialylated glycoproteins or glycoproteins that are only N-glycosylated.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete O-sialoglycoprotein endopeptidase activity (obsolete GO:0008450)","synonyms":[{"name":"O-sialoglycoprotein endopeptidase activity","type":"exact"},{"name":"glycophorin A proteinase activity","type":"related"},{"name":"glycoprotease activity","type":"related"},{"name":"glycoproteinase activity","type":"related"},{"name":"sialoglycoprotease activity","type":"related"},{"name":"sialoglycoproteinase activity","type":"related"}],"termid":"GO:0008450"}


id: GO:2001253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K36 trimethylation.","definition_xrefs":["PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K36 trimethylation (obsolete GO:2001253)","termid":"GO:2001253"}


id: PBO:0050034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 2 (pseudogene)","termid":"PBO:0050034"}


id: GO:0097145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAK, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAK complex","termid":"GO:0097145"}


id: PR:Q9P7C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erj5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7C1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C2E1P5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.03","synonyms":[{"name":"Spom972h-erj5","type":"exact"}],"termid":"PR:Q9P7C1"}


id: PBO:0077147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase","termid":"PBO:0077147"}


id: PR:P17476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp101 gene.","definition_xrefs":["UniProtKB:P17476","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.15","synonyms":[{"name":"A1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp101","type":"exact"}],"termid":"PR:P17476"}


id: PBO:0068594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 45, pseudogene","termid":"PBO:0068594"}


id: PBO:0038559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abl interactor 1 pseudogene 1","termid":"PBO:0038559"}


id: GO:1902923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(3-hydroxyvalerate).","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie","PMID:21705209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"},{"relation_name":"is_a","term_name":"poly(3-hydroxyvalerate) metabolic process","termid":"GO:1902922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(3-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(3-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(3-hydroxyvalerate) formation","type":"exact"},{"name":"poly(3-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902923"}


id: GO:0050709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of protein secretion","synonyms":[{"name":"down regulation of protein secretion","type":"exact"},{"name":"down-regulation of protein secretion","type":"exact"},{"name":"downregulation of protein secretion","type":"exact"},{"name":"inhibition of protein secretion","type":"narrow"}],"termid":"GO:0050709"}


id: GO:0044695
data:
  {"annotated_genes":["SJAG_01657","SJAG_00552","SJAG_04151","SJAG_02703","SJAG_01585","SJAG_03302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84480,88200,93543,103914,108813,112479],"is_not":false,"summary":null,"term":"GO:0044695"}]},"cv_name":"cellular_component","definition":"An E3 ubiquitin ligase complex localized to the ER and Golgi membrane. In fission yeast comprises Dsc1, 2, 3 and 4. Involved in the processes of fission yeast sre1 (human SREBP) transcriptional activator proteolytic cleavage, the multivesicular body (MVB) pathway, and a post-endoplasmic reticulum pathway for protein catabolism.","definition_xrefs":["GOC:vw","PMID:21504829","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00552":null,"SJAG_01585":null,"SJAG_01657":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_04151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044695","terms_by_termid":{"GO:0044695":null}}


id: PBO:0085631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in fluoride export; nearly identical to FEX2, and deletion of both proteins results in a large increase in fluoride sensitivity compared with the single mutant; contains two FEX domains connected by a linker; part of a widespread family of conserved fluoride export proteins","termid":"PBO:0085631"}


id: PBO:0050059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, Z (pseudogene)","termid":"PBO:0050059"}


id: PBO:0005761
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.98","termid":"PBO:0005761"}


id: GO:1903897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the PERK-mediated unfolded protein response.","definition_xrefs":["PMID:22013210","GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"PERK-mediated unfolded protein response","termid":"GO:0036499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of PERK-mediated unfolded protein response","synonyms":[{"name":"regulation of EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"regulation of PERK branch of UPR","type":"exact"},{"name":"regulation of PERK signal transduction pathway","type":"broad"},{"name":"regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"}],"termid":"GO:1903897"}


id: GO:0007575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of nucleolar expansion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar size increase (obsolete GO:0007575)","synonyms":[{"name":"nucleolar size increase","type":"exact"}],"termid":"GO:0007575"}


id: GO:1990166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["GOC:mah","PMID:23080121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to site of double-strand break","synonyms":[{"name":"protein localisation to site of double-strand break","type":"exact"},{"name":"protein localization to double-strand break site","type":"exact"},{"name":"protein localization to site of DSB","type":"exact"}],"termid":"GO:1990166"}


id: PBO:0060265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYG1 antisense RNA 1","termid":"PBO:0060265"}


id: GO:0046621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organ growth","termid":"GO:0046621"}


id: GO:0030257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of approximately 20 proteins, most of which are located in the cytoplasmic membrane that carries out protein secretion in the bacterial type III secretion system; type III secretion also requires a cytoplasmic, probably membrane-associated ATPase.","definition_xrefs":["PMID:9618447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"type III protein secretion system complex","synonyms":[{"name":"T3SS complex","type":"exact"},{"name":"TTSS complex","type":"exact"}],"termid":"GO:0030257"}


id: PBO:0050741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 3","termid":"PBO:0050741"}


id: GO:0004495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mevalonate + acceptor = mevaldate + reduced acceptor.","definition_xrefs":["EC:1.1.1.32","EC:1.1.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mevaldate reductase activity","termid":"GO:0004495"}


id: GO:0097113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glutamate receptor clustering process in which alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate (AMPA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["GOC:pr","GOC:sjp","GOC:BHF","PMID:12796785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor clustering","termid":"GO:0097688"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"AMPA glutamate receptor clustering","synonyms":[{"name":"AMPA receptor clustering","type":"exact"},{"name":"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"}],"termid":"GO:0097113"}


id: PBO:0057123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 206","termid":"PBO:0057123"}


id: PBO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cadmium","termid":"PBO:0030380"}


id: PBO:0048954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 5","termid":"PBO:0048954"}


id: GO:1905570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["PMID:654321","GOC:TermGenie","GO_REF:0000058","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of siderophore biosynthetic process","termid":"GO:1900706"},{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"positively_regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of ferrichrome biosynthetic process","synonyms":[{"name":"activation of ferrichrome anabolism","type":"narrow"},{"name":"activation of ferrichrome biosynthesis","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferrichrome formation","type":"narrow"},{"name":"activation of ferrichrome synthesis","type":"narrow"},{"name":"positive regulation of ferrichrome anabolism","type":"exact"},{"name":"positive regulation of ferrichrome biosynthesis","type":"exact"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferrichrome formation","type":"exact"},{"name":"positive regulation of ferrichrome synthesis","type":"exact"},{"name":"up regulation of ferrichrome anabolism","type":"exact"},{"name":"up regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferrichrome formation","type":"exact"},{"name":"up regulation of ferrichrome synthesis","type":"exact"},{"name":"up-regulation of ferrichrome anabolism","type":"exact"},{"name":"up-regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferrichrome formation","type":"exact"},{"name":"up-regulation of ferrichrome synthesis","type":"exact"},{"name":"upregulation of ferrichrome anabolism","type":"exact"},{"name":"upregulation of ferrichrome biosynthesis","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferrichrome formation","type":"exact"},{"name":"upregulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905570"}


id: PBO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch protein (predicted)","termid":"PBO:0003680"}


id: PBO:0066494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 5","termid":"PBO:0066494"}


id: PBO:0041687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin related polypeptide beta","termid":"PBO:0041687"}


id: GO:0031646
data:
  {"annotated_genes":["SJAG_02415"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031643"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a neurophysiological process.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02415":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nervous system process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of neurological process","type":"narrow"},{"name":"positive regulation of neurological process","type":"exact"},{"name":"positive regulation of neurological system process","type":"exact"},{"name":"positive regulation of neurophysiological process","type":"exact"},{"name":"stimulation of neurological process","type":"narrow"},{"name":"up regulation of neurological process","type":"exact"},{"name":"up-regulation of neurological process","type":"exact"},{"name":"upregulation of neurological process","type":"exact"}],"termid":"GO:0031646","terms_by_termid":{"GO:0031643":null}}


id: PBO:0051472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-53 (pseudogene)","termid":"PBO:0051472"}


id: PBO:0031308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_maintenance","termid":"PBO:0031308"}


id: PBO:0028469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_interphase_microtubule_nucleation","termid":"PBO:0028469"}


id: PBO:0062858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 3","termid":"PBO:0062858"}


id: PR:Q10299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA cleavage complex II protein Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12755:SF0","PRO:DNx","OMA:SCHPO00989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation factor clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.05c","secondary_identifiers":["UniProtKB:Q10299"],"synonyms":[{"name":"Spom972h-CLP1","type":"exact"}],"termid":"PR:Q10299"}


id: PBO:0029242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_repression_of_transcription_during_cellular_response_to_zinc","termid":"PBO:0029242"}


id: GO:1903861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite extension.","definition_xrefs":["GO_REF:0000058","PMID:24898855","GOC:pad","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of dendrite extension","termid":"GO:1903859"},{"relation_name":"positively_regulates","term_name":"dendrite extension","termid":"GO:0097484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite extension","synonyms":[{"name":"activation of dendrite extension","type":"narrow"},{"name":"up regulation of dendrite extension","type":"exact"},{"name":"up-regulation of dendrite extension","type":"exact"},{"name":"upregulation of dendrite extension","type":"exact"}],"termid":"GO:1903861"}


id: GO:1900236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Kit signaling pathway.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of Kit signaling pathway","termid":"GO:1900234"},{"relation_name":"positively_regulates","term_name":"Kit signaling pathway","termid":"GO:0038109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Kit signaling pathway","synonyms":[{"name":"activation of Kit signaling pathway","type":"narrow"},{"name":"activation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"activation of stem cell factor signaling pathway","type":"exact"},{"name":"positive regulation of Kit signalling pathway","type":"exact"},{"name":"positive regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"positive regulation of stem cell factor signaling pathway","type":"exact"},{"name":"up regulation of Kit signaling pathway","type":"exact"},{"name":"up regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"up regulation of stem cell factor signaling pathway","type":"exact"},{"name":"up-regulation of Kit signaling pathway","type":"exact"},{"name":"up-regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of stem cell factor signaling pathway","type":"exact"},{"name":"upregulation of Kit signaling pathway","type":"exact"},{"name":"upregulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"upregulation of stem cell factor signaling pathway","type":"exact"}],"termid":"GO:1900236"}


id: PBO:0039179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 9","termid":"PBO:0039179"}


id: PBO:0031403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_cell","termid":"PBO:0031403"}


id: PBO:0070888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 20","termid":"PBO:0070888"}


id: MOD:00336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-aspartic acid residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-aspartato diiron disulfide.","definition_xrefs":["PubMed:7947772","RESID:AA0331","PubMed:1312028","PubMed:10968624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-aspartato diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(S-cysteinyl-O4-aspartatoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-aspartato diiron disulfide","type":"exact"}],"termid":"MOD:00336"}


id: PBO:0054537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1937","termid":"PBO:0054537"}


id: GO:0035975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["GOC:yaf","UniPathway:UPA00996"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamoyl phosphate catabolic process (obsolete GO:0035975)","synonyms":[{"name":"carbamoyl phosphate breakdown","type":"exact"},{"name":"carbamoyl phosphate catabolism","type":"exact"},{"name":"carbamoyl phosphate degradation","type":"exact"}],"termid":"GO:0035975"}


id: PBO:0036544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase Met1","termid":"PBO:0036544"}


id: PATO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's being capable of perceiving differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discriminate","termid":"PATO:0001319"}


id: GO:0005381
data:
  {"annotated_genes":["SJAG_04867","SJAG_04737","SJAG_04675","SJAG_02473","SJAG_04260","SJAG_02968"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93803,109242,109842],"is_not":false,"summary":null,"term":"GO:0005381"},{"annotations":[99637,96253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015093"},{"annotations":[88014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"}]},"cv_name":"molecular_function","definition":"Enables the transfer of iron (Fe) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02473":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"iron ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005382","Reactome:R-HSA-435349","Reactome:R-HSA-5623558","Reactome:R-HSA-904830","Reactome:R-HSA-917936","GO:0016033","Reactome:R-HSA-5655733","GO:0097689"],"synonyms":[{"name":"iron cation channel activity","type":"exact"},{"name":"iron channel activity","type":"exact"},{"name":"iron transporter activity","type":"exact"},{"name":"multicopper ferroxidase iron transport mediator activity","type":"related"},{"name":"transmembrane iron ion permease activity","type":"exact"},{"name":"transmembrane iron permease activity","type":"exact"},{"name":"zinc, iron permease activity","type":"related"}],"termid":"GO:0005381","terms_by_termid":{"GO:0005381":null,"GO:0015093":null,"GO:0061840":null}}


id: FYPO:0000189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mRNA splicing via the spliceosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"abnormal mRNA splicing, via spliceosome","synonyms":[{"name":"abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abnormal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0000189"}


id: PBO:0081783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 710","termid":"PBO:0081783"}


id: PBO:0030525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_during_premeiotic_DNA_replication","termid":"PBO:0030525"}


id: GO:1902365
data:
  {"annotated_genes":["SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140434"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localisation to spindle pole body","type":"narrow"},{"name":"activation of protein localization to spindle pole body","type":"narrow"},{"name":"positive regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localization to spindle pole body","type":"exact"},{"name":"up-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up-regulation of protein localization to spindle pole body","type":"exact"},{"name":"upregulation of protein localisation to spindle pole body","type":"exact"},{"name":"upregulation of protein localization to spindle pole body","type":"exact"}],"termid":"GO:1902365","terms_by_termid":{"GO:0140434":null}}


id: GO:0018528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: iminodiacetate + OH- = H+ + 2 e- + glyoxylate + glycine.","definition_xrefs":["UM-BBD_reactionID:r0589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"iminodiacetate dehydrogenase activity","termid":"GO:0018528"}


id: MOD:00415
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - OBSOLETE because Unimod entry 22 is now merged with entry 21 remap to MOD:00696 'phosphorylated residue'.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00415 phosphorylation without neutral loss (obsolete MOD:00415)","termid":"MOD:00415"}


id: PBO:0005783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit (predicted)","termid":"PBO:0005783"}


id: PATO:0000843
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000843 relative auditory threshold value (obsolete PATO:0000843)","termid":"PATO:0000843"}


id: GO:0010329
data:
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id: FYPO:0000357
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id: PBO:0061300
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id: GO:0043954
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id: PBO:0083372
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id: PR:O74536
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id: PBO:0056912
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id: PBO:0029042
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id: PBO:0028755
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id: PBO:0087138
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id: GO:0034308
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id: PBO:0071159
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id: PR:Q09873
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id: GO:0010948
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id: PBO:0039659
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id: PBO:0043210
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id: PBO:0034248
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id: GO:0047578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-glutamate + 2-oxoglutarate = 4-hydroxy-2-oxoglutarate + L-glutamate.","definition_xrefs":["MetaCyc:4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN","EC:2.6.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"4-hydroxyglutamate transaminase activity","secondary_identifiers":["RHEA:10480","Reactome:R-HSA-6784393"],"synonyms":[{"name":"4-hydroxy-L-glutamate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"4-hydroxyglutamate aminotransferase activity","type":"exact"}],"termid":"GO:0047578"}


id: GO:1902016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid.","definition_xrefs":["GOC:TermGenie","PMID:16735734","UniPathway:UPA00828","UniPathway:UPA00789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid metabolic process","termid":"GO:1902015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid biosynthetic process","synonyms":[{"name":"poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid anabolism","type":"exact"},{"name":"poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid biosynthesis","type":"exact"},{"name":"poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid formation","type":"exact"},{"name":"poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid synthesis","type":"exact"},{"name":"poly(glucosyl N-acetylgalactosamine 1-phosphate) teichoic acid biosynthesis","type":"exact"},{"name":"poly(glucosyl N-acetylgalactosamine 1-phosphate) teichoic acid biosynthetic process","type":"exact"}],"termid":"GO:1902016"}


id: PBO:0070176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 90 pseudogene","termid":"PBO:0070176"}


id: GO:1901675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 acetylation (obsolete GO:1901675)","synonyms":[{"name":"down regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down regulation of histone H3K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down-regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3K27 acetylation","type":"exact"},{"name":"downregulation of histone H3 acetylation at K27","type":"exact"},{"name":"downregulation of histone H3-K27 acetylation","type":"exact"},{"name":"downregulation of histone H3K27 acetylation","type":"exact"},{"name":"inhibition of histone H3 acetylation at K27","type":"exact"},{"name":"inhibition of histone H3-K27 acetylation","type":"narrow"},{"name":"inhibition of histone H3K27 acetylation","type":"exact"},{"name":"negative regulation of histone H3 acetylation at K27","type":"exact"},{"name":"negative regulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901675"}


id: GO:0102547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2-O-(alpha-D-glucopyranosyl)-D-glycerate = alpha-D-glucose + D-glycerate.","definition_xrefs":["EC:3.3.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucosylglycerate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-14901","RHEA:32059"],"termid":"GO:0102547"}


id: FYPO:0003467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA splice site specificity differs from normal. For example, different exons may be included or excluded, or introns in which the normally recognized 3' splice site AG nucleotides are mutated may be spliced.","definition_xrefs":["PMID:1617727","PMID:17130122","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"altered splice site specificity","synonyms":[{"name":"abnormal splice site specificity","type":"exact"},{"name":"altered splice site specificity during mitotic cell cycle","type":"related"},{"name":"altered splice site specificity during vegetative growth","type":"exact"}],"termid":"FYPO:0003467"}


id: PBO:0003801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp6 (predicted)","termid":"PBO:0003801"}


id: GO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules forming, or destined to form, part of a cell wall, involving more than one organism. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:tair_curators","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cell wall macromolecule metabolic process (obsolete GO:0044037)","synonyms":[{"name":"multi-organism cell wall macromolecule metabolism","type":"exact"}],"termid":"GO:0044037"}


id: PBO:0039503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 1","termid":"PBO:0039503"}


id: GO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH3 protein domain, present in Bcl-2 family members. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death.","definition_xrefs":["PMID:9704409","Prosite:PS01259","PMID:11048732","PMID:9020082","PMID:12133724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"},{"relation_name":"is_a","term_name":"death domain binding","termid":"GO:0070513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"BH3 domain binding","termid":"GO:0051434"}


id: MOD:01670
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-methyl-L-lysine.","definition_xrefs":["PubMed:16091367","PubMed:16195462","PubMed:17260957","RESID:AA0524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"halogenated lysine","termid":"MOD:01672"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-chloro-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(chloroamino)hexanoic acid","type":"exact"},{"name":"N(zeta)-chlorolysine","type":"exact"},{"name":"N6-chloro-L-lysine","type":"exact"},{"name":"N6ClLys","type":"exact"},{"name":"epsilon-chlorolysine","type":"exact"},{"name":"lysine chloramine","type":"exact"}],"termid":"MOD:01670"}


id: SO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, circular RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"double_stranded_RNA_chromosome","termid":"SO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_double_stranded_RNA_chromosome","synonyms":[{"name":"circular double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000967"}


id: PBO:0028180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cysteine_synthase_activity","termid":"PBO:0028180"}


id: GO:0005461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucuronic acid from one side of a membrane to the other. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"UDP-glucuronic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5603297","Reactome:R-HSA-174368"],"termid":"GO:0005461"}


id: PBO:0056117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 2","termid":"PBO:0056117"}


id: PBO:0080204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin, adherens junctions transmembrane protein","termid":"PBO:0080204"}


id: PBO:0090048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid11, terminal uridylyl transferase","termid":"PBO:0090048"}


id: PBO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 4 pseudogene","termid":"PBO:0050927"}


id: PBO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 173 pseudogene","termid":"PBO:0070235"}


id: GO:1990308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-I dockerin domain of a protein. Type-I dockerin domain is the binding partner of type-1 cohesin domain.","definition_xrefs":["PMID:23195689","GOC:mengo_curators","PMID:24080387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type-I dockerin domain binding","termid":"GO:1990308"}


id: GO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible reaction: (R,R)-butane-2,3-diol + NAD+ = (R)-acetoin + NADH + H+.","definition_xrefs":["EC:1.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(R,R)-butanediol dehydrogenase activity","secondary_identifiers":["RHEA:24340","MetaCyc:RR-BUTANEDIOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-2,3-butanediol dehydrogenase activity","type":"related"},{"name":"(R)-diacetyl reductase activity","type":"related"},{"name":"1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"1-amino-2-propanol oxidoreductase activity","type":"related"},{"name":"2,3-butanediol dehydrogenase activity","type":"related"},{"name":"D-(-)-butanediol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol:NAD(2) oxidoreductase activity","type":"related"},{"name":"D-aminopropanol dehydrogenase activity","type":"related"},{"name":"D-butanediol dehydrogenase activity","type":"related"},{"name":"aminopropanol oxidoreductase activity","type":"related"},{"name":"butylene glycol dehydrogenase activity","type":"related"},{"name":"butyleneglycol dehydrogenase activity","type":"related"},{"name":"diacetyl (acetoin) reductase activity","type":"related"}],"termid":"GO:0000721"}


id: GO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial humoral response","termid":"GO:0008348"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide production","synonyms":[{"name":"down regulation of antimicrobial peptide production","type":"exact"},{"name":"down-regulation of antimicrobial peptide production","type":"exact"},{"name":"downregulation of antimicrobial peptide production","type":"exact"},{"name":"inhibition of antimicrobial peptide production","type":"narrow"}],"termid":"GO:0002785"}


id: PBO:0027892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA_and_centromeric_DNA_associated_with_spindle","termid":"PBO:0027892"}


id: GO:0016783
data:
  {"annotated_genes":["SJAG_03896","SJAG_03932","SJAG_01302","SJAG_00358","SJAG_00186","SJAG_03553","SJAG_01239","SJAG_04113","SJAG_01935"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016784"},{"annotations":[110158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004076"},{"annotations":[102771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031071"},{"annotations":[108687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016992"},{"annotations":[91680,93986,113060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004792"},{"annotations":[89904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061708"},{"annotations":[101735,104334,89905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106054"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of sulfur atoms from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_01239":null,"SJAG_01302":null,"SJAG_01935":null,"SJAG_03553":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782264","Reactome:R-HSA-947538","EC:2.8.1.-","Reactome:R-HSA-1614618"],"synonyms":[{"name":"sulphurtransferase activity","type":"exact"}],"termid":"GO:0016783","terms_by_termid":{"GO:0004076":null,"GO:0004792":null,"GO:0016784":null,"GO:0016992":null,"GO:0031071":null,"GO:0061708":null,"GO:0106054":null}}


id: GO:1903520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GOC:TermGenie","PMID:23164222","GOC:dph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"negatively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary gland involution","synonyms":[{"name":"down regulation of mammary gland involution","type":"exact"},{"name":"down-regulation of mammary gland involution","type":"exact"},{"name":"downregulation of mammary gland involution","type":"exact"},{"name":"inhibition of mammary gland involution","type":"narrow"}],"termid":"GO:1903520"}


id: PBO:0045335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK9 antisense RNA 1","termid":"PBO:0045335"}


id: GO:0033464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GGG codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033464"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: FYPO:0007660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells, which then subsequently divide at an abnormal size. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions) upon each division.","definition_xrefs":["PomBase:jh","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variable cell size at division","termid":"FYPO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division with subsequent division at abnormal size","synonyms":[{"name":"increased variability of cell size in a vegetative population, with subsequent division at abnormal size","type":"exact"},{"name":"variable cell length at entry into mitosis followed by unequal cell division","type":"exact"},{"name":"variable cell size at division with abnormal cell size homeostasis","type":"exact"},{"name":"variable cell size at division with loss of cell size homeostasis","type":"exact"},{"name":"variable cell size at division with subsequent division at abnormal size during mitotic cell cycle","type":"related"},{"name":"variable cell size at division with subsequent division at abnormal size during vegetative growth","type":"exact"},{"name":"variable vegetative cell size at division with subsequent division at abnormal size","type":"exact"}],"termid":"FYPO:0007660"}


id: GO:0019534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a toxin from one side of a membrane to the other. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"toxin transmembrane transporter activity","termid":"GO:0019534"}


id: PBO:0056458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS1 proto-oncogene, G protein-coupled receptor","termid":"PBO:0056458"}


id: GO:0035185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first nine mitotic division cycles of the insect embryo, during which the dividing nuclei lie deep in the interior of the egg and divide nearly synchronously. This is the first phase of the syncytial period where nuclei divide in a common cytoplasm without cytokinesis.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"},{"relation_name":"is_a","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}


id: PBO:0001473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein DNAJB family (predicted)","termid":"PBO:0001473"}


id: GO:0015724
data:
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id: PBO:0056667
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id: PATO:0002148
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id: GO:0022607
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id: PBO:0064012
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id: PBO:0090403
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id: GO:0005594
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id: GO:0031549
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id: GO:0031739
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id: SO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL6 RNA leader sequence to the 5' end of an mRNA. SL6 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL6_acceptor_site","synonyms":[{"name":"SL6 acceptor site","type":"exact"}],"termid":"SO:0001751"}


id: PATO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000378 absolute frequency value (obsolete PATO:0000378)","termid":"PATO:0000378"}


id: PBO:0070995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 19","termid":"PBO:0070995"}


id: GO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol tetrakisphosphate 6-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855206","MetaCyc:RXN-7184"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 6-kinase activity","type":"exact"},{"name":"inositol 1,3,4,5-tetrakisphosphate 6-kinase activity","type":"exact"}],"termid":"GO:0000825"}


id: GO:0016688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ascorbate + hydrogen peroxide = dehydroascorbate + 2 H2O.","definition_xrefs":["EC:1.11.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-ascorbate peroxidase activity","secondary_identifiers":["MetaCyc:RXN-12440","RHEA:22996"],"synonyms":[{"name":"L-ascorbate:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"L-ascorbic acid peroxidase activity","type":"related"},{"name":"L-ascorbic acid-specific peroxidase activity","type":"related"},{"name":"ascorbate peroxidase activity","type":"related"},{"name":"ascorbic acid peroxidase activity","type":"related"}],"termid":"GO:0016688"}


id: PBO:0067636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 809, pseudogene","termid":"PBO:0067636"}


id: GO:0051134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["ISBN:0781735149","PMID:12154375","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of NK T cell activation","termid":"GO:0051133"},{"relation_name":"negatively_regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of NK T cell activation","synonyms":[{"name":"down regulation of NK T cell activation","type":"exact"},{"name":"down-regulation of NK T cell activation","type":"exact"},{"name":"downregulation of NK T cell activation","type":"exact"},{"name":"inhibition of NK T cell activation","type":"narrow"},{"name":"negative regulation of NK T lymphocyte activation","type":"exact"},{"name":"negative regulation of NK T-cell activation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte activation","type":"exact"},{"name":"negative regulation of NKT cell activation","type":"exact"},{"name":"negative regulation of NT cell activation","type":"exact"},{"name":"negative regulation of natural T cell activation","type":"exact"},{"name":"negative regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051134"}


id: FYPO:0001875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body","termid":"FYPO:0001874"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body","synonyms":[{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"decreased occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001875"}


id: GO:1902105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte differentiation.","definition_xrefs":["GOC:add","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"regulates","term_name":"leukocyte differentiation","termid":"GO:0002521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte differentiation","synonyms":[{"name":"regulation of immune cell differentiation","type":"exact"},{"name":"regulation of leucocyte differentiation","type":"exact"}],"termid":"GO:1902105"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: PBO:0074624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 22","termid":"PBO:0074624"}


id: GO:0047234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = sucrose + 1F-alpha-D-galactosylraffinose.","definition_xrefs":["MetaCyc:2.4.1.166-RXN","EC:2.4.1.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"raffinose-raffinose alpha-galactotransferase activity","secondary_identifiers":["MetaCyc:RXN-11490","RHEA:14125"],"synonyms":[{"name":"raffinose (raffinose donor) galactosyltransferase activity","type":"related"},{"name":"raffinose-raffinose a-galactosyltransferase activity","type":"exact"},{"name":"raffinose-raffinose alpha-galactosyltransferase activity","type":"exact"},{"name":"raffinose:raffinose alpha-D-galactosyltransferase activity","type":"related"},{"name":"raffinose:raffinose alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047234"}


id: GO:0052106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms living in intimate contact with a host organism monitors population density by detecting the concentration of small diffusible signal molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete quorum sensing involved in interaction with host (obsolete GO:0052106)","synonyms":[{"name":"quorum sensing during interaction with host","type":"related"}],"termid":"GO:0052106"}


id: PBO:0057191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 363","termid":"PBO:0057191"}


id: PBO:0004629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2,N2-dimethylguanosine tRNA methyltransferase","termid":"PBO:0004629"}


id: PBO:0040459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase cation transporting 13A2","termid":"PBO:0040459"}


id: PBO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding","termid":"PBO:0031561"}


id: SO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within the splice region (1-3 bases of the exon or 3-8 bases of the intron) of a non coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"},{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_splice_region_variant","synonyms":[{"name":"ANNOVAR:ncRNA_splicing","type":"narrow"}],"termid":"SO:0002088"}


id: SO:1001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"orphan","termid":"SO:0000910"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan_CDS","synonyms":[{"name":"orphan CDS","type":"exact"}],"termid":"SO:1001247"}


id: PBO:0090405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidyl transferase Rev1","termid":"PBO:0090405"}


id: FYPO:0003387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal catalase activity","termid":"FYPO:0001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000002","FYPO:0000652","FYPO:0000654","FYPO:0005447"],"is_obsolete":false,"name":"decreased catalase activity","synonyms":[{"name":"reduced catalase activity","type":"exact"}],"termid":"FYPO:0003387"}


id: PR:Q09783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.04","synonyms":[{"name":"Spom972h-tim8","type":"exact"}],"termid":"PR:Q09783"}


id: GO:0120249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lateral wall of an outer hair cell (OHC) is a unique trilaminate composite consisting of the plasma membrane, an underlying cytoskeletal network containing an actin-spectrin cortical lattice, and an adjacent system of circumferential lamellar organelles known as the subsurface cisternae.","definition_xrefs":["PMID:26352669","PMID:31920560","PMID:9412485","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral wall of outer hair cell","synonyms":[{"name":"OHC lateral wall","type":"related"},{"name":"lateral wall of OHC","type":"related"},{"name":"outer hair cell lateral wall","type":"exact"}],"termid":"GO:0120249"}


id: PBO:0090725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase","termid":"PBO:0090725"}


id: PBO:0064424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 2","termid":"PBO:0064424"}


id: PR:Q9UTF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small EDRK-rich factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF-like protein C1705.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.02","secondary_identifiers":["UniProtKB:Q9UTF0"],"synonyms":[{"name":"Spom972h-SERF1","type":"exact"}],"termid":"PR:Q9UTF0"}


id: GO:0004088
data:
  {"annotated_genes":["SJAG_00964","SJAG_00392","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89046,102406,107035],"is_not":false,"summary":null,"term":"GO:0004088"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.","definition_xrefs":["EC:6.3.5.5","RHEA:18633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73577","MetaCyc:CARBPSYN-RXN"],"synonyms":[{"name":"CPS activity","type":"related"},{"name":"GD-CPSase activity","type":"related"},{"name":"carbamoyl phosphate synthase (glutamine-hydrolyzing) activity","type":"exact"},{"name":"carbamoyl phosphate synthetase activity","type":"related"},{"name":"carbamoyl-phosphate synthase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolysing) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"carbamoylphosphate synthetase II activity","type":"related"},{"name":"carbamyl phosphate synthetase (glutamine) activity","type":"related"},{"name":"carbon-dioxide::L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"},{"name":"glutamine-dependent carbamoyl-phosphate synthase activity","type":"related"},{"name":"glutamine-dependent carbamyl phosphate synthetase activity","type":"related"},{"name":"hydrogen-carbonate:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) activity","type":"related"}],"termid":"GO:0004088","terms_by_termid":{"GO:0004088":null}}


id: GO:1901221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"positively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber morphogenesis","synonyms":[{"name":"activation of cardiac chamber morphogenesis","type":"narrow"},{"name":"activation of heart chamber morphogenesis","type":"narrow"},{"name":"positive regulation of heart chamber morphogenesis","type":"exact"},{"name":"up regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"up regulation of heart chamber morphogenesis","type":"exact"},{"name":"up-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"up-regulation of heart chamber morphogenesis","type":"exact"},{"name":"upregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"upregulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901221"}


id: PBO:0052471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 17","termid":"PBO:0052471"}


id: PBO:0072251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 26","termid":"PBO:0072251"}


id: PBO:0072155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 32","termid":"PBO:0072155"}


id: GO:0036207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:krc","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone gene expression (obsolete GO:0036207)","synonyms":[{"name":"activation of histone gene expression","type":"narrow"},{"name":"positive regulation of expression of histone-encoding gene","type":"exact"},{"name":"up-regulation of histone gene expression","type":"exact"},{"name":"upregulation of histone gene expression","type":"exact"}],"termid":"GO:0036207"}


id: FYECO:0000389
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with sulfate ions as the sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, sulfate sulfur source","synonyms":[{"name":"glucose MM, sulphate sulphur source","type":"exact"},{"name":"glucose minimal medium, sulfate sulfur source","type":"exact"},{"name":"glucose minimal medium, sulphate sulphur source","type":"exact"}],"termid":"FYECO:0000389"}


id: GO:0048577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces short-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["GOC:pj","ISBN:0709408862","ISBN:0582015952","GOC:jid","ISBN:0697037754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of short-day photoperiodism, flowering","termid":"GO:0048587"},{"relation_name":"negatively_regulates","term_name":"short-day photoperiodism, flowering","termid":"GO:0048575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of short-day photoperiodism, flowering","synonyms":[{"name":"down regulation of short-day photoperiodism, flowering","type":"exact"},{"name":"down-regulation of short-day photoperiodism, flowering","type":"exact"},{"name":"downregulation of short-day photoperiodism, flowering","type":"exact"},{"name":"inhibition of short-day photoperiodism, flowering","type":"narrow"}],"termid":"GO:0048577"}


id: FYPO:0000526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pexophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased peroxisome degradation","synonyms":[{"name":"decreased pexophagy","type":"exact"},{"name":"pexophagy: decreased","type":"related"},{"name":"reduced peroxisome degradation","type":"exact"}],"termid":"FYPO:0000526"}


id: PBO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromosomal_translocation","termid":"PBO:0030464"}


id: PBO:0025535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22 (predicted)","termid":"PBO:0025535"}


id: GO:0160058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a plant endodermal cell.","definition_xrefs":["PMID:21735349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant endodermal cell differentiation","termid":"GO:0160058"}


id: PR:O14039
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S rRNA (cytosine-C(5))-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01769","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase rcm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.06c","secondary_identifiers":["UniProtKB:O14039"],"synonyms":[{"name":"Spom972h-NSUN5","type":"exact"},{"name":"rRNA m(5)C methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14039"}


id: PBO:0076025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 24","termid":"PBO:0076025"}


id: GO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-threonine to form peptidyl-O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine sulfation","termid":"GO:0050985"}


id: GO:0097685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell surface furrow (or groove) found on a dinoflagellate apex. It typically loops around the apex.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","GOC:at","ISBN:0632009152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface furrow","termid":"GO:0097610"},{"relation_name":"part_of","term_name":"dinoflagellate epicone","termid":"GO:0097613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0009986"],"is_obsolete":false,"name":"dinoflagellate apical groove","synonyms":[{"name":"apical groove","type":"broad"}],"termid":"GO:0097685"}


id: PBO:0040674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31 pseudogene 2","termid":"PBO:0040674"}


id: PBO:0085890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in recovery from cell cycle arrest in response to pheromone, in a Far1p-independent pathway; interacts with Far7p, Far8p, Far9p, Far10p, and Far11p; localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0085890"}


id: PBO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf29","termid":"PBO:0004561"}


id: PBO:0071671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 3","termid":"PBO:0071671"}


id: PBO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 4","termid":"PBO:0070774"}


id: PBO:0004498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc1","termid":"PBO:0004498"}


id: FYPO:0001826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished sodium export","synonyms":[{"name":"abolished sodium export during mitotic cell cycle","type":"related"},{"name":"abolished sodium export from cell","type":"exact"},{"name":"abolished sodium ion export","type":"exact"},{"name":"sodium export abolished","type":"exact"},{"name":"sodium export abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001826"}


id: GO:0060146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional gene silencing of host genes that are homologous to viral genes after viral infection.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete host gene silencing in virus induced gene silencing (obsolete GO:0060146)","termid":"GO:0060146"}


id: PR:P79058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug134 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein mug134 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.16","synonyms":[{"name":"Spom972h-mug134","type":"exact"},{"name":"initiation of G zero protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79058"}


id: GO:0098615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl selenide => S-adenosyl-L-homocysteine + trimethylselenonium.","definition_xrefs":["PMID:17988700","PMID:3350800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"dimethyl selenide methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408554"],"termid":"GO:0098615"}


id: GO:1904085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of epiboly.","definition_xrefs":["PMID:24892953","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of epiboly (obsolete GO:1904085)","synonyms":[{"name":"activation of epiboly","type":"narrow"},{"name":"positive regulation of epiboly","type":"exact"},{"name":"up regulation of epiboly","type":"exact"},{"name":"up-regulation of epiboly","type":"exact"},{"name":"upregulation of epiboly","type":"exact"}],"termid":"GO:1904085"}


id: PBO:0013827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family Psl1 (predicted)","termid":"PBO:0013827"}


id: GO:1990486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty acid in the absence of oxygen. A fatty acid is any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.","definition_xrefs":["PMID:17329794","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"anaerobic fatty acid catabolic process","synonyms":[{"name":"anaerobic fatty acid degradation","type":"exact"}],"termid":"GO:1990486"}


id: GO:0021587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellum is generated and organized. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum morphogenesis","termid":"GO:0021587"}


id: GO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a mineralocorticoid and transmitting the signal to the transcriptional machinery by binding to a specific DNA sequence in order to modulate transcription by RNA polymerase II.","definition_xrefs":["GOC:signaling","PMID:20932876"],"gene_count":0,"genotype_count":0,"name":"obsolete mineralocorticoid receptor activity (obsolete GO:0017082)","synonyms":[{"name":"aldosterone receptor","type":"narrow"}],"termid":"GO:0017082"}


id: PBO:0045025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in renal carcinoma 3","termid":"PBO:0045025"}


id: GO:0042946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glucoside transport","termid":"GO:0042946"}


id: PBO:0003106
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator","termid":"PBO:0003106"}


id: GO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a host cell that contains the viral genome.","definition_xrefs":["GOC:bf","GOC:bm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell viral nucleoid","termid":"GO:0039643"}


id: PBO:0064527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G","termid":"PBO:0064527"}


id: PBO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 45","termid":"PBO:0080083"}


id: PBO:0070556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 22","termid":"PBO:0070556"}


id: MOD:00524
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2dHex2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)dHex(2)","type":"related"},{"name":"Hex1HexNAc2dHex2","type":"related"}],"termid":"MOD:00524"}


id: PBO:0054918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2332","termid":"PBO:0054918"}


id: GO:1990955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded DNA.","definition_xrefs":["PMID:8493094","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA binding","termid":"GO:0003697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"G-rich single-stranded DNA binding","termid":"GO:1990955"}


id: GO:0032892
data:
  {"annotated_genes":["SJAG_03591","SJAG_04920","SJAG_00991","SJAG_05346","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[88945,106486,87274,94620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[88946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[88947,94621,87275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organic acid transport","type":"narrow"},{"name":"stimulation of organic acid transport","type":"narrow"},{"name":"up regulation of organic acid transport","type":"exact"},{"name":"up-regulation of organic acid transport","type":"exact"},{"name":"upregulation of organic acid transport","type":"exact"}],"termid":"GO:0032892","terms_by_termid":{"GO:0035432":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: PBO:0060611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCCRP1, F-box associated domain containing","termid":"PBO:0060611"}


id: GO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that restore integrity to damaged tissue that contribute to an inflammatory response.","definition_xrefs":["ISBN:0721601871","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wound healing","termid":"GO:0042060"},{"relation_name":"part_of","term_name":"inflammatory response to wounding","termid":"GO:0090594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing involved in inflammatory response","synonyms":[{"name":"healing during inflammatory response","type":"related"},{"name":"inflammatory response wound healing","type":"related"}],"termid":"GO:0002246"}


id: GO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving purine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleobase metabolic process","termid":"GO:0006141"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleobase metabolic process","synonyms":[{"name":"down regulation of purine base metabolic process","type":"exact"},{"name":"down-regulation of purine base metabolic process","type":"exact"},{"name":"downregulation of purine base metabolic process","type":"exact"},{"name":"inhibition of purine base metabolic process","type":"narrow"},{"name":"negative regulation of purine base metabolic process","type":"exact"},{"name":"negative regulation of purine base metabolism","type":"exact"}],"termid":"GO:0045982"}


id: PBO:0025480
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a cup of GReen Tea wakes up the sleepy guy","termid":"PBO:0025480"}


id: PBO:0040096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 2, pseudogene","termid":"PBO:0040096"}


id: FYPO:0001337
data:
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id: GO:1905150
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id: PR:Q10349
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id: PBO:0045662
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id: PBO:0065949
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id: FYPO:0002983
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id: GO:0047110
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id: PBO:0081149
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id: PBO:0036034
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id: PBO:0091326
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id: PBO:0074846
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id: PBO:0044532
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id: PBO:0077013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin 2","termid":"PBO:0077013"}


id: PBO:0086402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative FAD transporter, similar to Flc1p and Flc2p; localized to the ER; FLC3 has a paralog, FLC1, that arose from the whole genome duplication","termid":"PBO:0086402"}


id: FYPO:0004313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to CENP-A containing chromatin","termid":"FYPO:0004311"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"decreased protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin","type":"exact"},{"name":"reduced protein localization to CENP-A containing chromatin","type":"exact"}],"termid":"FYPO:0004313"}


id: PBO:0063377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA associated protein 1","termid":"PBO:0063377"}


id: GO:1904338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","PMID:15522889","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"dopaminergic neuron differentiation","termid":"GO:0071542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"}


id: FYPO:0007243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is normal (i.e. indistinguishable from wild type) in one, and premature in the other, of the daughter cells formed as a result of the division of a mother cell in which NETO did not occurs. NETO is normal in the daughter cell that inherits the parent cell's old end, and begins earlier than normal in the daughter cell that inherits parent cell's new end. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PomBase:mah","PMID:31719163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO in daughter cells","termid":"FYPO:0007240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005568","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end","synonyms":[{"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end during mitotic cell cycle","type":"related"},{"name":"normal NETO in cell derived from growing end and premature NETO in cell derived from non-growing end during vegetative growth","type":"exact"},{"name":"normal activation of bipolar cell growth in cell derived from growing end and premature activation of bipolar cell growth in cell derived from non-growing end","type":"related"},{"name":"normal cell growth mode switching, monopolar to bipolar in cell derived from growing end and premature cell growth mode switching, monopolar to bipolar in cell derived from non-growing end","type":"exact"},{"name":"normal new end take-off in cell derived from growing end and premature NETO in cell derived from non-growing end","type":"exact"},{"name":"normal switch from monopolar to bipolar cell growth in cell derived from growing end and premature switch from monopolar to bipolar cell growth in cell derived from non-growing end","type":"exact"}],"termid":"FYPO:0007243"}


id: PBO:0061397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPPA antisense RNA 1","termid":"PBO:0061397"}


id: PR:Q9P7I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane emp24 domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04512","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal protein P24B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.17","secondary_identifiers":["UniProtKB:Q9P7I9"],"synonyms":[{"name":"Spom972h-TMED2","type":"exact"}],"termid":"PR:Q9P7I9"}


id: GO:0007049
data:
  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