# terms

id: GO:1902213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prolactin signaling pathway.","definition_xrefs":["PMID:11773439","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of prolactin signaling pathway","termid":"GO:1902211"},{"relation_name":"positively_regulates","term_name":"prolactin signaling pathway","termid":"GO:0038161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prolactin signaling pathway","synonyms":[{"name":"activation of PRL signaling pathway","type":"narrow"},{"name":"activation of prolactin signaling pathway","type":"narrow"},{"name":"activation of prolactin-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of PRL signaling pathway","type":"exact"},{"name":"positive regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"up regulation of PRL signaling pathway","type":"exact"},{"name":"up regulation of prolactin signaling pathway","type":"exact"},{"name":"up regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"up-regulation of PRL signaling pathway","type":"exact"},{"name":"up-regulation of prolactin signaling pathway","type":"exact"},{"name":"up-regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"upregulation of PRL signaling pathway","type":"exact"},{"name":"upregulation of prolactin signaling pathway","type":"exact"},{"name":"upregulation of prolactin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902213"}


id: FYPO:0004067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004067"}


id: GO:0052452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the innate immune response of the symbiont organism; the innate immune response is the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont innate immunity (obsolete GO:0052452)","synonyms":[{"name":"modulation by organism of symbiont innate immunity","type":"exact"},{"name":"modulation of symbiont innate immune response","type":"exact"}],"termid":"GO:0052452"}


id: FYPO:0005757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more membranes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to membrane during vegetative growth","synonyms":[{"name":"abolished protein localisation to membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization to membrane during mitotic cell cycle","type":"related"},{"name":"protein absent from membrane during vegetative growth","type":"related"},{"name":"protein localization to membrane abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005757"}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:sart","GOC:ma","GOC:expert_rsh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: GO:0034557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxylaminobenzoate + NAD(P)H = anthranilate + NAD(P)+ + H2O.","definition_xrefs":["MetaCyc:RXN-8848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-hydroxylaminobenzoate reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0850"],"synonyms":[{"name":"o-hydroxylaminobenzoate nitroreductase activity","type":"related"}],"termid":"GO:0034557"}


id: GO:0070295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which water is taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal water transport","termid":"GO:0003097"},{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"renal water absorption","synonyms":[{"name":"nephron water absorption","type":"exact"},{"name":"renal water reabsorption","type":"exact"}],"termid":"GO:0070295"}


id: GO:0070600
data:
  {"annotated_genes":["SJAG_04184","SJAG_03057","SJAG_04236","SJAG_00424","SJAG_01028","SJAG_02278","SJAG_02916","SJAG_00610","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84644,100012,104999,110434,113882],"is_not":false,"summary":null,"term":"GO:0070600"},{"annotations":[87989,98656,84945,90594],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in fungal-type cell walls, including those of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"},{"relation_name":"is_a","term_name":"cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070598"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070599"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-alpha-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"fungal-type cell wall 1,3-alpha-glucan formation","type":"exact"},{"name":"fungal-type cell wall 1,3-alpha-glucan synthesis","type":"exact"},{"name":"fungal-type cell wall alpha-1,3-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall alpha-1,3-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall alpha-1,3-glucan biosynthetic process","type":"exact"},{"name":"fungal-type cell wall alpha-1,3-glucan formation","type":"exact"},{"name":"fungal-type cell wall alpha-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0070600","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0029459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology","termid":"PBO:0029459"}


id: GO:0052313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of nutrient release from other organism involved in symbiotic interaction (obsolete GO:0052313)","synonyms":[{"name":"modulation of nutrient release from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052313"}


id: FYPO:0000562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular respiration does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished cellular respiration","synonyms":[{"name":"abolished cellular respiration during mitotic cell cycle","type":"related"},{"name":"absent respiratory metabolism","type":"exact"},{"name":"cellular respiration abolished","type":"exact"},{"name":"cellular respiration abolished during vegetative growth","type":"exact"},{"name":"respiration abolished","type":"broad"},{"name":"respiratory metabolism abolished","type":"exact"},{"name":"respiratory metabolism: absent","type":"related"}],"termid":"FYPO:0000562"}


id: GO:0072439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether DNA replication is complete is received and converted into a molecular signal, contributing to a meiotic DNA replication checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in meiotic DNA replication checkpoint (obsolete GO:0072439)","synonyms":[{"name":"meiotic DNA replication checkpoint sensor mechanism","type":"related"},{"name":"meiotic DNA replication checkpoint sensor process","type":"related"},{"name":"sensing involved in meiotic DNA replication checkpoint","type":"related"}],"termid":"GO:0072439"}


id: PBO:0024839
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SUV3","termid":"PBO:0024839"}


id: GO:0006806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insecticide resistance (obsolete GO:0006806)","synonyms":[{"name":"insecticide resistance","type":"exact"}],"termid":"GO:0006806"}


id: PBO:0042729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein H","termid":"PBO:0042729"}


id: PATO:0000817
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000817 anosmia (obsolete PATO:0000817)","termid":"PATO:0000817"}


id: FYPO:0005157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype characterized by normal ascus morphology, i.e. the size, shape, and structure of the ascus are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal ascus morphology","termid":"FYPO:0005157"}


id: GO:0060731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process the increases the rate, frequency or extent of intestinal epithelial structure maintenance, a tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of intestinal epithelial structure maintenance","termid":"GO:0060730"},{"relation_name":"positively_regulates","term_name":"intestinal epithelial structure maintenance","termid":"GO:0060729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal epithelial structure maintenance","termid":"GO:0060731"}


id: PBO:0040470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR serine/threonine kinase","termid":"PBO:0040470"}


id: PBO:0046014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 1","termid":"PBO:0046014"}


id: GO:0075220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore encystment on host","termid":"GO:0075216"},{"relation_name":"is_a","term_name":"modulation of zoospore encystment on host","termid":"GO:0075219"},{"relation_name":"positively_regulates","term_name":"zoospore encystment on host","termid":"GO:0075218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore encystment on host","termid":"GO:0075220"}


id: PBO:0067749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 48","termid":"PBO:0067749"}


id: PBO:0078533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 26","termid":"PBO:0078533"}


id: GO:0007639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in the meristem.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meristem growth","termid":"GO:0010075"},{"relation_name":"is_a","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of meristem cells","termid":"GO:0007639"}


id: PBO:0030633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_7-methylguanosine_cap_hypermethylation","termid":"PBO:0030633"}


id: PBO:0046221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 14","termid":"PBO:0046221"}


id: FYPO:0003554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of degradation of RNA transcribed from middle meiotic genes is increased during late meiosis. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PMID:20531409","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA catabolic process","termid":"FYPO:0003553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"increased degradation of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased breakdown of middle meiotic gene mRNA during late meiosis","type":"exact"},{"name":"increased catabolism of middle meiotic gene mRNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiotic gene mRNA during late meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003554"}


id: GO:1990043
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101817],"is_not":false,"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage immediately 5' to pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["EC:3.1.25.-","GOC:al","PMID:9708997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonuclease (pyrimidine dimer) activity","termid":"GO:0033892"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"5' deoxyribonuclease (pyrimidine dimer) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990043","terms_by_termid":{"GO:1990043":null}}


id: PBO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminase 2","termid":"PBO:0048722"}


id: GO:0004076
data:
  {"annotated_genes":["SJAG_01935"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110158],"is_not":false,"summary":null,"term":"GO:0004076"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + dethiobiotin + S(2-) = 2 5'-deoxyadenosine + 2 L-methionine + biotin + H+.","definition_xrefs":["EC:2.8.1.6","RHEA:22060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01935":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"biotin synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01078","MetaCyc:2.8.1.6-RXN"],"synonyms":[{"name":"biotin synthetase activity","type":"related"},{"name":"dethiobiotin:sulfur sulfurtransferase activity","type":"related"}],"termid":"GO:0004076","terms_by_termid":{"GO:0004076":null}}


id: MOD:01005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butylsulfenyl","synonyms":[{"name":"StBu","type":"exact"}],"termid":"MOD:01005"}


id: GO:1900891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentadecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"negatively_regulates","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pentadecane metabolic process","synonyms":[{"name":"down regulation of pentadecane metabolic process","type":"exact"},{"name":"down regulation of pentadecane metabolism","type":"related"},{"name":"down-regulation of pentadecane metabolic process","type":"exact"},{"name":"down-regulation of pentadecane metabolism","type":"related"},{"name":"downregulation of pentadecane metabolic process","type":"exact"},{"name":"downregulation of pentadecane metabolism","type":"related"},{"name":"inhibition of pentadecane metabolic process","type":"narrow"},{"name":"inhibition of pentadecane metabolism","type":"narrow"},{"name":"negative regulation of pentadecane metabolism","type":"related"}],"termid":"GO:1900891"}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: PBO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head domain","termid":"PBO:0002156"}


id: PBO:0062709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily H member 1","termid":"PBO:0062709"}


id: GO:0047569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + 3-oxoadipate = succinate + 3-oxoadipyl-CoA.","definition_xrefs":["MetaCyc:3-OXOADIPATE-COA-TRANSFERASE-RXN","EC:2.8.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"3-oxoadipate CoA-transferase activity","secondary_identifiers":["RHEA:12048","UM-BBD_reactionID:r1050"],"synonyms":[{"name":"3-oxoadipate coenzyme A-transferase activity","type":"related"},{"name":"3-oxoadipate succinyl-CoA transferase activity","type":"related"},{"name":"beta-ketoadipate:succinyl-CoA transferase activity","type":"related"},{"name":"succinyl-CoA:3-oxoadipate CoA-transferase activity","type":"related"}],"termid":"GO:0047569"}


id: PBO:0031212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multiseptate_vegetative_cell","termid":"PBO:0031212"}


id: PBO:0082078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-deoxynucleotidase; non-essential gene involved in deoxyribonucleoside monophosphate degradation; interacts with the DNA helicase Hpr5p; YGL101W has a paralog, YBR242W, that arose from the whole genome duplication","termid":"PBO:0082078"}


id: PBO:0052622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 1","termid":"PBO:0052622"}


id: PBO:0049342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I antisense RNA 1","termid":"PBO:0049342"}


id: SO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region localized within the lipid bilayer where both ends traverse the same membrane.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramembrane_polypeptide_region","termid":"SO:0001075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_peptide_loop","secondary_identifiers":["BS:00155"],"synonyms":[{"name":"membrane peptide loop","type":"exact"},{"name":"membrane_loop","type":"related"}],"termid":"SO:0001076"}


id: PBO:0044626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dachsous cadherin-related 1","termid":"PBO:0044626"}


id: PBO:0080546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 5","termid":"PBO:0080546"}


id: GO:0020020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Vacuole within a parasite used for digestion of the host cell cytoplasm. An example of this component is found in the Apicomplexa.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagolysosome","termid":"GO:0032010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"food vacuole","secondary_identifiers":["GO:0005772"],"synonyms":[{"name":"digestive vacuole","type":"exact"}],"termid":"GO:0020020"}


id: PBO:0062364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily X member 1","termid":"PBO:0062364"}


id: PBO:0076003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIM1 antisense RNA 1","termid":"PBO:0076003"}


id: PBO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.105","termid":"PBO:0000697"}


id: GO:1905525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter in response to iron that results in regulation of ferrichrome biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000063","PMID:20435771"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ferrichrome biosynthetic process by negative regulation of transcription from RNA polymerase II promoter in response to iron (obsolete GO:1905525)","synonyms":[{"name":"regulation of ferrichrome anabolism by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome anabolism by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome formation by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"}],"termid":"GO:1905525"}


id: GO:0110125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of myotube cell migration.","definition_xrefs":["PMID:29122742","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of myotube cell migration","termid":"GO:0110123"},{"relation_name":"negatively_regulates","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myotube cell migration","termid":"GO:0110125"}


id: PBO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62 C-terminal like","termid":"PBO:0061675"}


id: PBO:0060812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear paraspeckle assembly transcript 1","termid":"PBO:0060812"}


id: PBO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 4","termid":"PBO:0042966"}


id: GO:0045750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of S phase of mitotic cell cycle activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of S phase of mitotic cell cycle (obsolete GO:0045750)","synonyms":[{"name":"activation of S phase of mitotic cell cycle","type":"narrow"},{"name":"positive regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"positive regulation of S-phase of mitotic cell cycle","type":"exact"},{"name":"stimulation of S phase of mitotic cell cycle","type":"narrow"},{"name":"up regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"up-regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"upregulation of S phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0045750"}


id: PBO:0052906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-3","termid":"PBO:0052906"}


id: PBO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 1","termid":"PBO:0061948"}


id: PBO:0111646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Bur6","termid":"PBO:0111646"}


id: CHEBI:16238
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD","termid":"CHEBI:16238"}


id: GO:0031669
data:
  {"annotated_genes":["SJAG_00561","SJAG_01509","SJAG_03473","SJAG_02424","SJAG_00534","SJAG_01970","SJAG_03519","SJAG_04725","SJAG_02026","SJAG_00256","SJAG_00233","SJAG_04496","SJAG_04743","SJAG_03371","SJAG_01162","SJAG_04067","SJAG_02699","SJAG_02380","SJAG_02765","SJAG_03309","SJAG_02973","SJAG_01184","SJAG_04873","SJAG_04677","SJAG_00169","SJAG_03713","SJAG_03911","SJAG_01245","SJAG_03048","SJAG_00824","SJAG_03486","SJAG_04032","SJAG_04031","SJAG_00457","SJAG_00380","SJAG_00781","SJAG_00209","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102128,109437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[89804,83788,93726,83489,86838,90891,103293,90326,105609,106906,84926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[88584,96202,107335,112570,94138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[88016,89741,99624,89733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[101070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[109369,111866,109368,103480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[114453,96904,90276,94293,105191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[111651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[99672],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[99675,98609],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[97170,83318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[98183],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"cellular response to extracellular stimulus","termid":"GO:0031668"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00561":null,"SJAG_00781":null,"SJAG_00824":null,"SJAG_01162":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02380":null,"SJAG_02424":null,"SJAG_02699":null,"SJAG_02765":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_03371":null,"SJAG_03473":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_03713":null,"SJAG_03911":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04496":null,"SJAG_04677":null,"SJAG_04725":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nutrient levels","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031669","terms_by_termid":{"GO:0000433":null,"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0036245":null,"GO:0042149":null,"GO:1901481":null,"GO:1901482":null,"GO:1904547":null,"GO:1905287":null}}


id: SO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing a box C/D sequence motif, guiding the methylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_scaRNA_gene","synonyms":[{"name":"C/D scaRNA gene","type":"exact"}],"termid":"SO:0002372"}


id: GO:0061441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a renal artery is generated and organized. Renal arteries supply the kidneys with blood.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:11891195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"kidney vasculature morphogenesis","termid":"GO:0061439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal artery morphogenesis","termid":"GO:0061441"}


id: GO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane-bounded periplasmic space","secondary_identifiers":["Wikipedia:Periplasmic_space"],"synonyms":[{"name":"outer membrane bounded periplasmic space","type":"exact"},{"name":"outer membrane-enclosed periplasmic space","type":"exact"}],"termid":"GO:0030288"}


id: PBO:0028074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_cut","termid":"PBO:0028074"}


id: PBO:0082769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; the complex binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; homologous to bacterial Omp85","termid":"PBO:0082769"}


id: GO:0006786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme c, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["PubChem_Compound:122208","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme C metabolic process","termid":"GO:0046162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme C biosynthetic process","synonyms":[{"name":"haem C biosynthesis","type":"exact"},{"name":"haem C biosynthetic process","type":"exact"},{"name":"heme C anabolism","type":"exact"},{"name":"heme C biosynthesis","type":"exact"},{"name":"heme C formation","type":"exact"},{"name":"heme C synthesis","type":"exact"}],"termid":"GO:0006786"}


id: GO:0007178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses serine/threonine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase signaling pathway","type":"broad"},{"name":"transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0007178"}


id: PBO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_transport","termid":"PBO:0031715"}


id: _global:interaction_genotype_b
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_b","termid":"_global:interaction_genotype_b"}


id: PBO:0068435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 5, pseudogene","termid":"PBO:0068435"}


id: PBO:0072597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"round spermatid basic protein 1 like","termid":"PBO:0072597"}


id: MOD:00495
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12185208","Unimod:124#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-iodoacetyl, p-chlorobenzyl-13C6-glucamine","synonyms":[{"name":"ICAT-H:13C(6)","type":"related"},{"name":"N-iodoacetyl, p-chlorobenzyl-13C6-glucamine","type":"related"}],"termid":"MOD:00495"}


id: PBO:0085186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two isoforms of the gamma subunit of eEF1B; stimulates the release of GDP from eEF1A (Tef1p/Tef2p) post association with the ribosomal complex with eEF1Balpha subunit; nuclear protein required for transcription of MXR1; binds the MXR1 promoter in the presence of other nuclear factors; binds calcium and phospholipids","termid":"PBO:0085186"}


id: FYPO:0009071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to itraconazole. Cells stop growing (and may die) at a concentration of itraconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to itraconazole","synonyms":[{"name":"hypersensitive to itraconazole","type":"exact"},{"name":"sensitive to itraconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to itraconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0009071"}


id: PBO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 11","termid":"PBO:0070706"}


id: GO:0009271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage.","definition_xrefs":["GOC:add","PMID:16045608","GOC:jl","PMID:15485810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"cellular response to virus","termid":"GO:0098586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phage shock","termid":"GO:0009271"}


id: GO:0009100
data:
  {"annotated_genes":["SJAG_03311","SJAG_00554","SJAG_00334","SJAG_04316","SJAG_00394","SJAG_04571","SJAG_02163","SJAG_03056","SJAG_00747","SJAG_04401","SJAG_03280","SJAG_03082","SJAG_03871","SJAG_01858","SJAG_03188","SJAG_04231","SJAG_01950","SJAG_03149","SJAG_00890","SJAG_04770","SJAG_04952","SJAG_05219","SJAG_00816","SJAG_01389","SJAG_02648","SJAG_03227","SJAG_02056","SJAG_03774","SJAG_00437","SJAG_03150","SJAG_03333","SJAG_01021","SJAG_01972","SJAG_00598","SJAG_02519","SJAG_03764","SJAG_03032","SJAG_02783","SJAG_02903","SJAG_00924","SJAG_03790","SJAG_03330","SJAG_01491","SJAG_04906","SJAG_03535","SJAG_01595","SJAG_03555","SJAG_02996","SJAG_02102","SJAG_04954","SJAG_01276","SJAG_04363","SJAG_01006","SJAG_01069","SJAG_03676","SJAG_05348","SJAG_04728","SJAG_04095","SJAG_04090","SJAG_00831","SJAG_04127","SJAG_04053","SJAG_04821","SJAG_03656","SJAG_01264","SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100357,100906,82958,93604,101834,99924,104944,88642,114465,96533,100789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[88643,101835],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044845"},{"annotations":[92113,98092,94124,112838,89531,95741,99404,94416,100841,95758,108551,105221,82959,94068,107039,86654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[89174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"},{"annotations":[82960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009101"},{"annotations":[100579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006516"},{"annotations":[88763,88764,88765,94506,94505,94508,95531,109811,114136,114609,82830,98516,94507,88762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006491"},{"annotations":[91391,104307,103929,109812,110018,112170,113915,98896],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006486"},{"annotations":[100358,105223,88766,99609,84709,94490,93605,94491,97128,100790,106662,101836,114610,94509,95742,82831,85898,96089,94488,114137,98517,94498,96534,95778,104945,88767,88768,98366,99405,94510,95533,98593,88769,94511,102609,106656,106857,108695,93498,114466,113401,100907,95385,94669,82961,94489,94512],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006487"},{"annotations":[98367,105224,107040,90996,109813,97137,112943],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0018279"},{"annotations":[98518,106657,114138,106663,94499,101637,96535,101837],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006493"},{"annotations":[88644,92115,99610,114467,102610,99925,100359,97326],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035269"},{"annotations":[91392,89175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":66,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00890":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01858":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03227":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoprotein metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein metabolism","type":"exact"}],"termid":"GO:0009100","terms_by_termid":{"GO:0000032":null,"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006491":null,"GO:0006493":null,"GO:0006516":null,"GO:0009101":null,"GO:0018279":null,"GO:0035269":null,"GO:0044845":null,"GO:0097466":null,"GO:1904380":null}}


id: GO:1900542
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187","SJAG_04422","SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85197,111065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[107336,111540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[85198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[114092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[111066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_02380":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of purine metabolic process","type":"narrow"},{"name":"regulation of purine metabolism","type":"narrow"},{"name":"regulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900542","terms_by_termid":{"GO:0043456":null,"GO:0045820":null,"GO:1905706":null,"GO:1905857":null,"GO:2001211":null}}


id: GO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylsalicylate + H+ = 3-cresol + CO2.","definition_xrefs":["RHEA:23112","EC:4.1.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"6-methylsalicylate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03567","MetaCyc:6-METHYLSALICYLATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"6-MSA decarboxylase activity","type":"related"},{"name":"6-methylsalicylate carboxy-lyase (3-cresol-forming)","type":"related"},{"name":"6-methylsalicylate carboxy-lyase activity","type":"related"},{"name":"6-methylsalicylic acid (2,6-cresotic acid) decarboxylase activity","type":"related"}],"termid":"GO:0047596"}


id: PBO:0066658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal oxygenase 2","termid":"PBO:0066658"}


id: PBO:0073410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 14","termid":"PBO:0073410"}


id: PBO:0089141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Deb1/Rdp1","termid":"PBO:0089141"}


id: GO:0072466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about aspects of cell polarity control is received and converted into a molecular signal, contributing to a cell shape checkpoint.","definition_xrefs":["GOC:mah","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cell shape checkpoint (obsolete GO:0072466)","synonyms":[{"name":"cell shape checkpoint sensor mechanism","type":"related"},{"name":"cell shape checkpoint sensor process","type":"related"},{"name":"sensing involved in cell shape checkpoint","type":"related"}],"termid":"GO:0072466"}


id: PBO:0075747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72 pseudogene 2","termid":"PBO:0075747"}


id: PBO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIL3 like basic leucine zipper","termid":"PBO:0060951"}


id: PBO:0058077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4295","termid":"PBO:0058077"}


id: PBO:0053204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 3","termid":"PBO:0053204"}


id: PBO:0030439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_methylation","termid":"PBO:0030439"}


id: PBO:0053038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1, translational regulator","termid":"PBO:0053038"}


id: GO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type IV secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052058)","termid":"GO:0052058"}


id: GO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the host cell Golgi apparatus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"},{"relation_name":"part_of","term_name":"host cell Golgi apparatus","termid":"GO:0044177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi membrane","synonyms":[{"name":"host Golgi membrane","type":"exact"}],"termid":"GO:0044178"}


id: PBO:0028048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_interphase_microtubules","termid":"PBO:0028048"}


id: PBO:0078293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta locus","termid":"PBO:0078293"}


id: PBO:0004482
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.-.-","termid":"PBO:0004482"}


id: GO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of L-phenylalanine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete L-phenylalanine catabolic process to phosphoenolpyruvate (obsolete GO:0019562)","secondary_identifiers":["MetaCyc:PHENYLALANINE-DEG1-PWY"],"synonyms":[{"name":"phenylalanine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"phenylalanine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019562"}


id: FYPO:0002769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to spindle pole body","synonyms":[{"name":"abnormal protein localisation to spindle pole body","type":"exact"},{"name":"abnormal protein localization to SPB","type":"exact"}],"termid":"FYPO:0002769"}


id: PBO:0067202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 267, pseudogene","termid":"PBO:0067202"}


id: GO:1900584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of o-orsellinic acid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"o-orsellinic acid metabolic process","termid":"GO:1900582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"o-orsellinic acid biosynthetic process","synonyms":[{"name":"o-orsellinic acid anabolism","type":"exact"},{"name":"o-orsellinic acid biosynthesis","type":"exact"},{"name":"o-orsellinic acid formation","type":"exact"},{"name":"o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900584"}


id: GO:0070518
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD53, a member of the tetraspan family.","definition_xrefs":["PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD53 complex","synonyms":[{"name":"ITGA4-ITGB1-CD53 complex","type":"narrow"}],"termid":"GO:0070518"}


id: GO:0034109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a second cell of the identical type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"homotypic cell-cell adhesion","termid":"GO:0034109"}


id: GO:0072578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which neurotransmitter-gated ion channels are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:20843816","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"}


id: PBO:0077087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 2","termid":"PBO:0077087"}


id: GO:0038030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a Wnt protein binding to a frizzled family receptor on the surface of a target cell, where the signal is passed on via the MAPKKK cascade.","definition_xrefs":["GOC:signaling","GOC:BHF","GOC:vk","PMID:17720811"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway via MAPK cascade (obsolete GO:0038030)","synonyms":[{"name":"non-canonical Wnt receptor signaling pathway via MAPK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway via MAPK signaling","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway via MAPKKK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway via MAPKKK cascade","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway via MAPK cascade","type":"exact"}],"termid":"GO:0038030"}


id: PBO:0048357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 68","termid":"PBO:0048357"}


id: GO:0048223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Network composed of hemicelluloses; members of a class of plant cell wall polysaccharide that cannot be extracted from the wall by hot water or chelating agents, but can be extracted by aqueous alkali. Includes xylan, glucuronoxylan, arabinoxylan, arabinogalactan II, glucomannan, xyloglucan and galactomannan.","definition_xrefs":["GOC:jid","DOI:10.1016/j.foodchem.2008.11.065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"hemicellulose network","termid":"GO:0048223"}


id: PBO:0073878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC10A5 pseudogene 1","termid":"PBO:0073878"}


id: PBO:0031291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_growth_phenotype","termid":"PBO:0031291"}


id: GO:1903322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein modification by small protein conjugation or removal.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-translational protein modification","termid":"GO:1901875"},{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"positively_regulates","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein modification by small protein conjugation or removal","synonyms":[{"name":"activation of protein modification by small protein conjugation or removal","type":"narrow"},{"name":"up regulation of protein modification by small protein conjugation or removal","type":"exact"},{"name":"up-regulation of protein modification by small protein conjugation or removal","type":"exact"},{"name":"upregulation of protein modification by small protein conjugation or removal","type":"exact"}],"termid":"GO:1903322"}


id: PBO:0065619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase domain containing 1","termid":"PBO:0065619"}


id: PBO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide-quinone oxidoreductase","termid":"PBO:0004116"}


id: GO:0048860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a glioblast into daughter cells.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glioblast division","termid":"GO:0048860"}


id: GO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3-amino-6-acetamidohexanoate = L-glutamate + 3-oxo-6-acetamidohexanoate.","definition_xrefs":["MetaCyc:2.6.1.65-RXN","EC:2.6.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"N6-acetyl-beta-lysine transaminase activity","secondary_identifiers":["RHEA:16889"],"synonyms":[{"name":"6-acetamido-3-aminohexanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N(6)-acetyl-beta-lysine aminotransferase activity","type":"related"},{"name":"N6-acetyl-beta-lysine aminotransferase activity","type":"exact"},{"name":"epsilon-acetyl-beta-lysine aminotransferase activity","type":"related"}],"termid":"GO:0047317"}


id: GO:0008766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate + D-alanyl-D-alanine = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine.","definition_xrefs":["RHEA:28374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity","secondary_identifiers":["EC:6.3.2.10","MetaCyc:UDP-NACMURALGLDAPAALIG-RXN"],"termid":"GO:0008766"}


id: SO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is di-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_dimethylation_site","synonyms":[{"name":"H3K27 di-methylation site","type":"exact"},{"name":"H3K27Me2","type":"related"}],"termid":"SO:0001726"}


id: GO:0006127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transferring reducing equivalents from the cytosol into the mitochondria; NADH is used to synthesise glycerol 3-phosphate in the cytosol; this compound is then transported into the mitochondria where it is converted to dihydroxyacetone phosphate (DHAP) using FAD; DHAP then returns to the cytosol to complete the cycle.","definition_xrefs":["PMID:16368075","ISBN:0716720094","GOC:jl","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH oxidation","termid":"GO:0006116"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"part_of","term_name":"respiratory electron transport chain","termid":"GO:0022904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"glycerophosphate shuttle","secondary_identifiers":["MetaCyc:PWY-6118"],"termid":"GO:0006127"}


id: FYPO:0006774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:20123972","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to prospore septin ring","synonyms":[{"name":"normal protein localisation to prospore septin ring","type":"exact"},{"name":"normal protein localization to forespore septin ring","type":"exact"},{"name":"normal protein localization to septin ring during prospore membrane assembly","type":"exact"}],"termid":"FYPO:0006774"}


id: GO:0005675
data:
  {"annotated_genes":["SJAG_04368","SJAG_04420","SJAG_00150","SJAG_00995","SJAG_03206","SJAG_00758","SJAG_03618","SJAG_04614","SJAG_01207","SJAG_00901","SJAG_00512"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85396,85779,87716,98963,101917,104402,104905,110890,111200],"is_not":false,"summary":null,"term":"GO:0005675"},{"annotations":[108063,108980,101918],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A complex that is capable of kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. It is composed of the core TFIIH complex and the TFIIK complex.","definition_xrefs":["PMID:22572993","PMID:22308316","GOC:ew","PMID:14500720","GOC:krc","PMID:7813015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"},{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null,"SJAG_03618":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"holo TFIIH complex","type":"exact"}],"termid":"GO:0005675","terms_by_termid":{"GO:0005675":null,"GO:0070985":null}}


id: PBO:0109195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein, DNA-repair associated protein, Srr1","termid":"PBO:0109195"}


id: GO:0033361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in a single enzymatic step.","definition_xrefs":["GOC:mah","MetaCyc:PWY-2942","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via diaminopimelate","termid":"GO:0009089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate, dehydrogenase pathway","synonyms":[{"name":"lysine anabolism via diaminopimelate, dehydrogenase pathway","type":"exact"},{"name":"lysine biosynthesis via diaminopimelic acid, dehydrogenase pathway","type":"exact"},{"name":"lysine formation via diaminopimelate, dehydrogenase pathway","type":"exact"},{"name":"lysine synthesis via diaminopimelate, dehydrogenase pathway","type":"exact"}],"termid":"GO:0033361"}


id: PBO:0056302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1S","termid":"PBO:0056302"}


id: PBO:0043481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 3","termid":"PBO:0043481"}


id: GO:0047136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(dimethylamino)azobenzene + H2O + NADP+ = 4-(dimethylamino)phenylazoxybenzene + H+ + NADPH.","definition_xrefs":["RHEA:19789","EC:1.7.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-(dimethylamino)phenylazoxybenzene reductase activity","secondary_identifiers":["MetaCyc:1.6.6.12-RXN","KEGG_REACTION:R04303"],"synonyms":[{"name":"4-(dimethylamino)phenylazobenzene:NADP+ oxidoreductase activity","type":"related"},{"name":"N,N-dimethyl-p-aminoazobenzene oxide reductase activity","type":"related"},{"name":"NADPH-dependent DMAB N-oxide reductase activity","type":"related"},{"name":"NADPH2:4-(dimethylamino)phenylazoxybenzene oxidoreductase activity","type":"related"},{"name":"NADPH:4-(dimethylamino)phenylazoxybenzene oxidoreductase activity","type":"related"},{"name":"dimethylaminoazobenzene N-oxide reductase activity","type":"related"}],"termid":"GO:0047136"}


id: PBO:0078731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 4-3","termid":"PBO:0078731"}


id: PBO:0078172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-3","termid":"PBO:0078172"}


id: PBO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, mitochondrial","termid":"PBO:0061565"}


id: GO:0071717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thromboxanes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A thromboxane is any of a class of oxygenated oxane derivatives, originally derived from prostaglandin precursors in platelets, that stimulate aggregation of platelets and constriction of blood vessels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"},{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"thromboxane transport","termid":"GO:0071717"}


id: PBO:0079258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 29","termid":"PBO:0079258"}


id: GO:0070149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling glutamate to glutamyl-tRNA in a mitochondrion, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamyl-tRNA aminoacylation","termid":"GO:0006424"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0006520","GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA aminoacylation","termid":"GO:0070149"}


id: PBO:0043690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I2","termid":"PBO:0043690"}


id: GO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction","synonyms":[{"name":"down regulation of tolerance induction","type":"exact"},{"name":"down-regulation of tolerance induction","type":"exact"},{"name":"downregulation of tolerance induction","type":"exact"},{"name":"inhibition of tolerance induction","type":"narrow"}],"termid":"GO:0002644"}


id: PBO:0078933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 1-1","termid":"PBO:0078933"}


id: GO:0005290
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93072,99681],"is_not":false,"summary":null,"term":"GO:0005290"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-histidine from one side of a membrane to the other. L-histidine is 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-histidine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-histidine transporter activity","type":"broad"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0005290","terms_by_termid":{"GO:0005290":null}}


id: FYPO:0004842
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm","type":"exact"},{"name":"protein mislocalised to cytoplasm","type":"exact"}],"termid":"FYPO:0004842","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:2000946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of starch catabolic process","termid":"GO:2000882"},{"relation_name":"is_a","term_name":"negative regulation of amylopectin metabolic process","termid":"GO:2000943"},{"relation_name":"is_a","term_name":"regulation of amylopectin catabolic process","termid":"GO:2000945"},{"relation_name":"negatively_regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of amylopectin catabolic process","synonyms":[{"name":"negative regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000946"}


id: GO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent modulation by organism of symbiont innate immunity (obsolete GO:0052499)","synonyms":[{"name":"pathogen-associated molecular pattern dependent modulation by organism of symbiont innate immunity","type":"exact"}],"termid":"GO:0052499"}


id: GO:1903298
data:
  {"annotated_genes":["SJAG_02875"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87894],"is_not":false,"summary":null,"term":"GO:1903298"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","PMID:24553947","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to hypoxia","termid":"GO:1900038"},{"relation_name":"is_a","term_name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","termid":"GO:1903297"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02875":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to hypoxia","type":"narrow"},{"name":"negative regulation of hypoxia-induced apoptosis","type":"related"},{"name":"negative regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"protection against hypoxia-induced apoptosis","type":"related"}],"termid":"GO:1903298","terms_by_termid":{"GO:1903298":null}}


id: PBO:0080790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XNDC1N-ZNF705EP-ALG1L9P readthrough","termid":"PBO:0080790"}


id: SO:0000898
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is epigenetically modified.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"is_a","term_name":"epigenetically_modified_region","termid":"SO:0001720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically_modified_gene","synonyms":[{"name":"epigenetically modified gene","type":"exact"}],"termid":"SO:0000898"}


id: PBO:0029540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_spheroid_cells_(obsolete_FYPO:0002182)","termid":"PBO:0029540"}


id: PBO:0030217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_nutrient","termid":"PBO:0030217"}


id: GO:0034588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of piRNAs, Piwi-associated RNAs, a class of 24- to 30-nucleotide RNA derived from repeat or complex DNA sequence elements and processed by a Dicer-independent mechanism.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete piRNA catabolic process (obsolete GO:0034588)","synonyms":[{"name":"Piwi-associated RNA catabolic process","type":"exact"},{"name":"piRNA breakdown","type":"exact"},{"name":"piRNA catabolism","type":"exact"},{"name":"piRNA degradation","type":"exact"}],"termid":"GO:0034588"}


id: PBO:0044031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan family member 4B, pseudogene","termid":"PBO:0044031"}


id: PBO:0003931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Npl4-Ufd1 complex component Npl4 (predicted)","termid":"PBO:0003931"}


id: GO:1905862
data:
  {"annotated_genes":["SJAG_04677","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88012,88015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of ferroxidase activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","GOC:TermGenie","PMID:16522632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04675":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ferroxidase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905862","terms_by_termid":{"GO:0033573":null}}


id: GO:0048239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination within the telomere.","definition_xrefs":["GOC:jid","PMID:9635193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombination at telomere","synonyms":[{"name":"down regulation of telomeric recombination at telomere","type":"exact"},{"name":"down-regulation of telomeric recombination at telomere","type":"exact"},{"name":"downregulation of telomeric recombination at telomere","type":"exact"},{"name":"inhibition of telomeric recombination at telomere","type":"narrow"},{"name":"negative regulation of telomeric recombination at telomere","type":"exact"},{"name":"suppression of telomeric recombination at telomere","type":"exact"}],"termid":"GO:0048239"}


id: PBO:0017868
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lissencephaly","termid":"PBO:0017868"}


id: PBO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MID1","termid":"PBO:0016516"}


id: PR:Q9P7H7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1782.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ilm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.02c","synonyms":[{"name":"Spom972h-SPAC1782.02c","type":"exact"}],"termid":"PR:Q9P7H7"}


id: GO:0033840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NDP-glucose + (1,4-alpha-D-glucosyl)n = NDP + (1,4-alpha-D-glucosyl)n+1.","definition_xrefs":["EC:2.4.1.242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"NDP-glucose-starch glucosyltransferase activity","secondary_identifiers":["RHEA:15873","MetaCyc:2.4.1.242-RXN"],"synonyms":[{"name":"GBSS","type":"related"},{"name":"GBSSI","type":"related"},{"name":"GBSSII","type":"related"},{"name":"NDP-glucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"NDPglucose-starch glucosyltransferase activity","type":"related"},{"name":"granule-bound starch synthase I activity","type":"related"},{"name":"granule-bound starch synthase II activity","type":"related"},{"name":"granule-bound starch synthase activity","type":"related"},{"name":"starch granule-bound nucleoside diphosphate glucose-starch glucosyltransferase activity","type":"related"},{"name":"starch synthase II activity","type":"related"},{"name":"waxy protein","type":"related"}],"termid":"GO:0033840"}


id: PBO:0017839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 1 (predicted)","termid":"PBO:0017839"}


id: PBO:0042987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 2","termid":"PBO:0042987"}


id: FYPO:0001177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing trehalose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on trehalose carbon source","synonyms":[{"name":"decreased growth on trehalose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on trehalose carbon source","type":"exact"},{"name":"reduced cell growth on trehalose carbon source","type":"exact"},{"name":"slow cell growth on trehalose carbon source","type":"narrow"}],"termid":"FYPO:0001177"}


id: GO:0034993
data:
  {"annotated_genes":["SJAG_01538","SJAG_04558","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92410,98615,108837],"is_not":false,"summary":null,"term":"GO:0034993"},{"annotations":[92413,98623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links links the nuclear lumen to cytoplasmic microtubules during meiosis.","definition_xrefs":["PMID:18692466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"},{"relation_name":"part_of","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"meiotic nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LINC complex","type":"exact"},{"name":"LInker of Nucleoskeleton and Cytoskeleton complex","type":"exact"},{"name":"SUN-KASH complex","type":"exact"}],"termid":"GO:0034993","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: PBO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 19","termid":"PBO:0050974"}


id: GO:0110119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of very-low-density lipoprotein particle clearance.","definition_xrefs":["GOC:BHF_miRNA","PMID:25510864","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle clearance","termid":"GO:0110119"}


id: GO:0007128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of meiosis I and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prophase","termid":"GO:0051324"},{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic prophase I","termid":"GO:0007128"}


id: GO:0032566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dGDP, deoxyguanosine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl deoxyribonucleotide binding","termid":"GO:0032560"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dGDP binding","termid":"GO:0032566"}


id: GO:0030858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"positively_regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell differentiation","synonyms":[{"name":"activation of epithelial cell differentiation","type":"narrow"},{"name":"stimulation of epithelial cell differentiation","type":"narrow"},{"name":"up regulation of epithelial cell differentiation","type":"exact"},{"name":"up-regulation of epithelial cell differentiation","type":"exact"},{"name":"upregulation of epithelial cell differentiation","type":"exact"}],"termid":"GO:0030858"}


id: PBO:0040416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 1","termid":"PBO:0040416"}


id: PR:Q10137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.10","synonyms":[{"name":"PI/PC TP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo20","type":"exact"},{"name":"phosphatidylinositol/phosphatidyl-choline transfer protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation-specific protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10137"}


id: GO:0034634
data:
  {"annotated_genes":["SJAG_01660","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91205,109159],"is_not":false,"summary":null,"term":"GO:0034634"}]},"cv_name":"molecular_function","definition":"Enables the transfer of glutathione, the tripeptide glutamylcysteinylglycine, from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"tripeptide transmembrane transporter activity","termid":"GO:0042937"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_03577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glutathione transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034634","terms_by_termid":{"GO:0034634":null}}


id: PBO:0064478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLG alternative reading frame","termid":"PBO:0064478"}


id: PBO:0039891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 45","termid":"PBO:0039891"}


id: MOD:00697
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a flavin group.","definition_xrefs":["Unimod:50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin modified residue","synonyms":[{"name":"FAD","type":"related"},{"name":"FlavRes","type":"exact"},{"name":"Flavin adenine dinucleotide","type":"related"}],"termid":"MOD:00697"}


id: RO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which one benefits and the other is unaffected (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"commensually_interacts_with","termid":"RO:0002441"}


id: PBO:0111332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L7-like protein involved in ribosome biogenesis","termid":"PBO:0111332"}


id: PR:O74940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamine-dependent NAD(+) synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23090:SF1","PRO:DNx","OMA:SCHPO04261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.02","secondary_identifiers":["UniProtKB:O74940"],"synonyms":[{"name":"NAD(+) synthase [glutamine-hydrolyzing] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NADSYN1","type":"exact"}],"termid":"PR:O74940"}


id: GO:0071231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to folic acid","synonyms":[{"name":"response to folate","type":"exact"},{"name":"response to vitamin B9","type":"exact"}],"termid":"GO:0071231"}


id: GO:0036271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylphenidate stimulus.","definition_xrefs":["GOC:hp","Wikipedia:Methylphenidate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylphenidate","synonyms":[{"name":"response to MPD","type":"exact"},{"name":"response to MPH","type":"exact"},{"name":"response to ritalin","type":"exact"}],"termid":"GO:0036271"}


id: GO:0048443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stamen over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"androecium development","termid":"GO:0048466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen development","secondary_identifiers":["GO:0048425"],"termid":"GO:0048443"}


id: PBO:0042031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 87","termid":"PBO:0042031"}


id: PBO:0067880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 182","termid":"PBO:0067880"}


id: PBO:0078793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 15-2","termid":"PBO:0078793"}


id: FYPO:0003949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfite reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal sulfite reductase activity","termid":"FYPO:0003948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased sulfite reductase activity","synonyms":[{"name":"decreased sulphite reductase activity","type":"exact"},{"name":"reduced sulfite reductase activity","type":"exact"}],"termid":"FYPO:0003949"}


id: PBO:0078902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 11-1","termid":"PBO:0078902"}


id: PBO:0066618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin Rho GTPase binding protein 2 pseudogene 1","termid":"PBO:0066618"}


id: PBO:0058193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4486","termid":"PBO:0058193"}


id: FYPO:0004385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of single-stranded DNA binding by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA binding","termid":"FYPO:0000658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased single-stranded DNA binding","synonyms":[{"name":"decreased ssDNA binding","type":"exact"},{"name":"reduced single-stranded DNA binding","type":"exact"}],"termid":"FYPO:0004385"}


id: PBO:0063786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 11","termid":"PBO:0063786"}


id: PBO:0063108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 1","termid":"PBO:0063108"}


id: PR:Q9UTS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zas1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.04c","synonyms":[{"name":"Spom972h-zas1","type":"exact"}],"termid":"PR:Q9UTS5"}


id: PBO:0071916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 1","termid":"PBO:0071916"}


id: GO:0075176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP-mediated signaling in response to host (obsolete GO:0075176)","synonyms":[{"name":"negative regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"negative regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"negative regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075176"}


id: GO:1901602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dethiobiotin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dethiobiotin binding","termid":"GO:1901602"}


id: GO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2 phase","termid":"GO:0051319"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051329"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051329","GO:0008150"],"is_obsolete":false,"name":"mitotic G2 phase","synonyms":[{"name":"G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000085"}


id: PBO:0067484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 618, pseudogene","termid":"PBO:0067484"}


id: PBO:0003529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog Of Bin","termid":"PBO:0003529"}


id: PBO:0018044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Tho1 (predicted)","termid":"PBO:0018044"}


id: PBO:0041780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle associated protein 1","termid":"PBO:0041780"}


id: GO:0001577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A lectin that exhibits calcium independent binding of beta-galactoside sugars.","definition_xrefs":["PMID:9786891"],"gene_count":0,"genotype_count":0,"name":"obsolete galectin (obsolete GO:0001577)","synonyms":[{"name":"S-type lectin","type":"exact"},{"name":"galectin","type":"exact"}],"termid":"GO:0001577"}


id: PBO:0039653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit sigma 1","termid":"PBO:0039653"}


id: GO:0031801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 4 metabotropic glutamate receptor binding","synonyms":[{"name":"type 4 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031801"}


id: PBO:0058242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4529","termid":"PBO:0058242"}


id: PBO:0085522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S24, no bacterial homolog; RPS24B has a paralog, RPS24A, that arose from the whole genome duplication","termid":"PBO:0085522"}


id: PBO:0089263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, SPNCRNA.800  syntenic position","termid":"PBO:0089263"}


id: PBO:0046863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2A","termid":"PBO:0046863"}


id: PATO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark brown","termid":"PATO:0001245"}


id: SO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A vaultRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"vaultRNA_primary_transcript","termid":"SO:0002040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_vaultRNA_primary_transcript","synonyms":[{"name":"miR encoding vaultRNA primary transcript","type":"exact"}],"termid":"SO:0002041"}


id: GO:0060073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of body fluids process in which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"micturition","secondary_identifiers":["Wikipedia:Urination"],"synonyms":[{"name":"urination","type":"exact"},{"name":"urine voiding","type":"exact"}],"termid":"GO:0060073"}


id: PBO:0054299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1690","termid":"PBO:0054299"}


id: GO:1905856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentose-phosphate shunt.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19015259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentose-phosphate shunt","termid":"GO:0043456"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0055086","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of pentose-phosphate shunt","termid":"GO:1905856"}


id: PBO:0039973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 4","termid":"PBO:0039973"}


id: PBO:0041473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 52","termid":"PBO:0041473"}


id: GO:0006281
data:
  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id: PBO:0049163
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id: GO:1905448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GOC:PARL","GOC:bc","GO_REF:0000058","GOC:TermGenie","PMID:23707074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled electron transport","termid":"GO:1905446"},{"relation_name":"positively_regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"activation of mitochondrial ATP synthesis coupled electron transport","type":"narrow"},{"name":"up regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"up-regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"upregulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"}],"termid":"GO:1905448"}


id: RO:0002379
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x spatially_coextensive_with y if and inly if x and y have the same location","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatially_coextensive_with","termid":"RO:0002379"}


id: PBO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0036007"}


id: PR:Q9URY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein WDR12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02085","PRO:DNx","PANTHER:PTHR19855:SF11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein ytm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.04c","secondary_identifiers":["UniProtKB:Q9URY0"],"synonyms":[{"name":"Spom972h-WDR12","type":"exact"}],"termid":"PR:Q9URY0"}


id: PR:Q9P7K7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21C3.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.17c","synonyms":[{"name":"Spom972h-SPBC21C3.17c","type":"exact"}],"termid":"PR:Q9P7K7"}


id: PBO:0036216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_actomyosin_contractile_ring_contraction","termid":"PBO:0036216"}


id: FYPO:0005598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is increased during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere","termid":"FYPO:0006239"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to centromere during meiotic cell cycle","synonyms":[{"name":"increased protein localisation to centromere during meiotic cell cycle","type":"exact"},{"name":"increased protein localisation to chromosome, centromeric region during meiotic cell cycle","type":"exact"},{"name":"increased protein localization to chromosome, centric region during meiotic cell cycle","type":"exact"},{"name":"increased protein localization to chromosome, centromeric region during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005598"}


id: PR:O13821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst4 gene.","definition_xrefs":["UniProtKB:O13821","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.05c","synonyms":[{"name":"Spom972h-sst4","type":"exact"},{"name":"suppressor of ste12 deletion protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13821"}


id: PBO:0005279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. Pombe Centromere","termid":"PBO:0005279"}


id: GO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-serine to form peptidyl-serine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}


id: FYPO:0002952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of S-methyl-L-ergothioneine measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased S-methyl-L-ergothioneine level during G0","synonyms":[{"name":"increased S-methyl-L-ergothioneine accumulation during G0","type":"related"},{"name":"increased S-methyl-L-ergothioneine level during cell quiescence","type":"exact"},{"name":"increased S-methyl-L-ergothioneine level during quiescence","type":"exact"}],"termid":"FYPO:0002952"}


id: GO:2000176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"positively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of pro-T cell differentiation","synonyms":[{"name":"positive regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000176"}


id: SO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA molecules that have been selected from random pools based on their ability to bind other molecules.","direct_ancestors":[{"relation_name":"is_a","term_name":"aptamer","termid":"SO:0000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_aptamer","synonyms":[{"name":"DNA aptamer","type":"exact"}],"termid":"SO:0000032"}


id: PBO:0091338
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.1625092_1625093insC","termid":"PBO:0091338"}


id: GO:0032950
data:
  {"annotated_genes":["SJAG_01787","SJAG_04462","SJAG_00610","SJAG_04771","SJAG_03705","SJAG_04668","SJAG_04509","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[87983,82973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[83363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[101193,87985,98654,86300,87969,113997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving beta-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of beta-glucan metabolism","type":"exact"}],"termid":"GO:0032950","terms_by_termid":{"GO:0032951":null,"GO:0060635":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0044353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of micropinocytosis.","definition_xrefs":["PMID:14731589","PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinosome","termid":"GO:0044352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"micropinosome","termid":"GO:0044353"}


id: PBO:0008883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mm/Mi","termid":"PBO:0008883"}


id: PBO:0083662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) membrane protein; involved in the translocation of soluble secretory proteins and insertion of membrane proteins into the ER membrane; may also have a role in the stress response but has only partial functional overlap with WSC1-3","termid":"PBO:0083662"}


id: PBO:0054523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1923","termid":"PBO:0054523"}


id: PBO:0067005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 11, pseudogene","termid":"PBO:0067005"}


id: PBO:0039180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 10","termid":"PBO:0039180"}


id: SO:0000858
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a kind of homology where divergence occurred after a speciation event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous","termid":"SO:0000857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous","termid":"SO:0000858"}


id: GO:0141040
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93926],"is_not":false,"summary":null,"term":"GO:0141040"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain (3R)-3-hydroxyacyl-CoA + NADP+ = a very-long-chain 3-oxoacyl-CoA + H+ + NADPH. This reaction is the second (reduction) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["RHEA:48680","PMID:16564093","PMID:19763486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"very-long-chain 3-oxoacyl-CoA reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.1.330","MetaCyc:RXN-7698","Reactome:R-HSA-548818"],"termid":"GO:0141040","terms_by_termid":{"GO:0141040":null}}


id: PBO:0047388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 27","termid":"PBO:0047388"}


id: PBO:0052982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ladinin 1","termid":"PBO:0052982"}


id: PBO:0073710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI family transcriptional corepressor 1","termid":"PBO:0073710"}


id: PR:O42918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu7 gene.","definition_xrefs":["UniProtKB:O42918","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.13","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-meu7","type":"exact"},{"name":"meiotic expression up-regulated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42918"}


id: GO:0043854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress and when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:22206667","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensitive monoatomic ion channel activity","termid":"GO:0008381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cyclic nucleotide-gated mechanosensitive monoatomic ion channel activity","synonyms":[{"name":"MscS","type":"related"},{"name":"cyclic nucleotide gated mechanosensitive ion channel activity","type":"exact"},{"name":"cyclic nucleotide regulated mechanosensitive ion channel","type":"exact"},{"name":"cyclic nucleotide-gated mechanosensitive ion channel activity","type":"broad"},{"name":"cyclic nucleotide-regulated mechanosensitive ion channel","type":"exact"},{"name":"cyclic nucleotide-regulated small mechanosensitive ion channel","type":"related"},{"name":"small conductance mechanosensitive ion channel","type":"exact"}],"termid":"GO:0043854"}


id: GO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The autophagy process by which cytosolic proteins targeted for degradation are tagged with a chaperone and are directly transferred into and degraded in a late endosomal compartment.","definition_xrefs":["GOC:pad","PMID:21238931","GOC:autophagy","GOC:dph","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"late endosomal microautophagy","termid":"GO:0061738"}


id: GO:0047296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 putrescine = NH3 + sym-homospermidine.","definition_xrefs":["MetaCyc:2.5.1.44-RXN","EC:2.5.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"homospermidine synthase activity","secondary_identifiers":["RHEA:18645"],"synonyms":[{"name":"putrescine:putrescine 4-aminobutyltransferase (ammonia-forming)","type":"related"}],"termid":"GO:0047296"}


id: PBO:0074819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18B","termid":"PBO:0074819"}


id: PBO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 1","termid":"PBO:0061701"}


id: GO:0140771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexadecanoyl-[ACP] + L-lysyl-[protein] = H+ + holo-[ACP] + N(6)-hexadecanoyl-L-lysyl-[protein].","definition_xrefs":["RHEA:70615","PMID:32461253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"ACP-dependent peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0140771"}


id: FYPO:0001839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at the same frequency as in wild-type cells. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal minichromosome loss","termid":"FYPO:0001839"}


id: PBO:0051400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining-constant/OR18 (pseudogene)","termid":"PBO:0051400"}


id: PBO:0088412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transmembrane transporter Vrg4","termid":"PBO:0088412"}


id: PBO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle","termid":"PBO:0031488"}


id: PBO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCK subfamily","termid":"PBO:0001271"}


id: GO:2001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"lipoxin A4 metabolic process","synonyms":[{"name":"LXA4 metabolic process","type":"exact"},{"name":"LXA4 metabolism","type":"exact"},{"name":"lipoxin A4 metabolism","type":"exact"}],"termid":"GO:2001302"}


id: PR:O74735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atx1 gene.","definition_xrefs":["UniProtKB:O74735","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal homeostasis factor atx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.10c","synonyms":[{"name":"Spom972h-atx1","type":"exact"}],"termid":"PR:O74735"}


id: PBO:0048553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 2","termid":"PBO:0048553"}


id: GO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of pancreatic juice secretion","termid":"GO:0090186"},{"relation_name":"negatively_regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of pancreatic juice secretion","termid":"GO:0090188"}


id: FYPO:0006811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which large chromosomal rearrangements occur at a normal (i.e. indistinguishable from wild type) frequency. Chromosomal rearrangements may include deletions, duplications, inversions, and translocations.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal gross chromosomal rearrangement frequency","synonyms":[{"name":"normal occurrence of gross chromosomal rearrangement","type":"exact"}],"termid":"FYPO:0006811"}


id: GO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to modulating the rate or frequency of cell proliferation.","definition_xrefs":["GOC:jl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"},{"relation_name":"part_of","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"regulation of cell population proliferation","termid":"GO:0042127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"canonical Wnt signaling pathway involved in regulation of cell proliferation","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of cell proliferation","type":"exact"}],"termid":"GO:0044340"}


id: GO:0018762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CN + H2O = R-COOH + NH3.","definition_xrefs":["EC:3.5.5.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"aliphatic nitrilase activity","secondary_identifiers":["MetaCyc:3.5.5.7-RXN","RHEA:46188","UM-BBD_reactionID:r0622"],"synonyms":[{"name":"aliphatic nitrile aminohydrolase activity","type":"related"}],"termid":"GO:0018762"}


id: GO:1904514
data:
  {"annotated_genes":["SJAG_03438","SJAG_03048","SJAG_03720","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84556,98170,102504,112324],"is_not":false,"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of initiation of premeiotic DNA replication.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25891897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear cell cycle DNA replication","termid":"GO:0010571"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"regulation of initiation of premeiotic DNA replication","termid":"GO:1904512"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiotic DNA replication initiation","termid":"GO:1902974"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_03048":null,"SJAG_03438":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"positive regulation of initiation of premeiotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of initiation of meiotic DNA synthesis","type":"related"},{"name":"activation of initiation of premeiotic DNA replication","type":"narrow"},{"name":"activation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"activation of meiotic DNA replication initiation","type":"related"},{"name":"activation of premeiotic DNA replication initiation","type":"narrow"},{"name":"positive regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"positive regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"positive regulation of meiotic DNA replication initiation","type":"related"},{"name":"positive regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up regulation of meiotic DNA replication initiation","type":"related"},{"name":"up regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up-regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up-regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up-regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up-regulation of meiotic DNA replication initiation","type":"related"},{"name":"up-regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"upregulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"upregulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"upregulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"upregulation of meiotic DNA replication initiation","type":"related"},{"name":"upregulation of premeiotic DNA replication initiation","type":"exact"}],"termid":"GO:1904514","terms_by_termid":{"GO:1904514":null}}


id: PBO:0079244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 17","termid":"PBO:0079244"}


id: GO:0097105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["PMID:18550748","GOC:sjp","GOC:BHF","PMID:15797875","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"presynaptic membrane organization","termid":"GO:0097090"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"presynaptic membrane assembly","synonyms":[{"name":"pre-synaptic membrane assembly","type":"exact"}],"termid":"GO:0097105"}


id: GO:0010071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of a meristem which will give rise to a primary or lateral root.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"embryonic meristem initiation","termid":"GO:0090421"},{"relation_name":"part_of","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"part_of","term_name":"embryonic meristem development","termid":"GO:0048508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root meristem specification","termid":"GO:0010071"}


id: PBO:0072057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 27","termid":"PBO:0072057"}


id: GO:0005795
data:
  {"annotated_genes":["SJAG_00816","SJAG_03347","SJAG_00330","SJAG_01633","SJAG_01025","SJAG_01276","SJAG_03634","SJAG_04548","SJAG_04112","SJAG_00567","SJAG_03555","SJAG_04739","SJAG_03278","SJAG_04770","SJAG_04095","SJAG_02902","SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86694,91229,92103,106797],"is_not":false,"summary":null,"term":"GO:0005795"},{"annotations":[91737,113063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000137"},{"annotations":[94444],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031985"},{"annotations":[96942,85851,93816,109084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[95244,96943,91738,109085,85852],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[108694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[82957,114135,100788,93603],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00330":null,"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_02902":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005794","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi stack","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016940"],"synonyms":[{"name":"Golgi cisternae","type":"exact"},{"name":"dictyosome","type":"narrow"}],"termid":"GO:0005795","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0005864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 4","termid":"PBO:0005864"}


id: GO:0010112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic acquired resistance","termid":"GO:0010112"}


id: PBO:0060062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 9","termid":"PBO:0060062"}


id: PBO:0061502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurensin 1","termid":"PBO:0061502"}


id: PBO:0072821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 14","termid":"PBO:0072821"}


id: PBO:0047594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGR proto-oncogene, Src family tyrosine kinase","termid":"PBO:0047594"}


id: SO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a transcript encoding the cleavage site for a ribonuclease enzyme.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease_site","synonyms":[{"name":"ribonuclease site","type":"exact"}],"termid":"SO:0001977"}


id: FYPO:0002140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular pigment accumulation","termid":"FYPO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased cellular pigment accumulation during cellular response to caffeine","synonyms":[{"name":"abnormal cellular pigment accumulation during cellular response to caffeine","type":"exact"},{"name":"altered colony color during cellular response to caffeine","type":"related"},{"name":"altered colony colour during cellular response to caffeine","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0002140"}


id: PBO:0084167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of the mitochondrial pyruvate carrier (MPC); expressed during growth on fermentable carbon sources, and heterodimerizes with Mpc1p to form the fermentative isoform of MPC; MPC localizes to the mitochondrial inner membrane and mediates pyruvate uptake; MPC2 paralog, MPC3, heterodimerizes with Mpc1p to form the respiratory MPC isoform","termid":"PBO:0084167"}


id: PBO:0074289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 4","termid":"PBO:0074289"}


id: FYPO:0004510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the meiotic spindle is abnormal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle assembly","termid":"FYPO:0000737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle assembly during meiosis II","synonyms":[{"name":"abnormal meiosis II spindle assembly","type":"exact"},{"name":"abnormal meiosis II spindle formation","type":"exact"},{"name":"abnormal meiotic spindle assembly during meiosis II","type":"exact"},{"name":"abnormal spindle assembly at meiosis II","type":"exact"},{"name":"abnormal spindle assembly during second meiotic nuclear division","type":"exact"},{"name":"abnormal spindle assembly involved in meiosis II","type":"exact"}],"termid":"FYPO:0004510"}


id: PBO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 5, Pup2 (predicted)","termid":"PBO:0002284"}


id: _global:overlaps
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"X overlaps Y iff there exists some Z such that Z contained_by X and Z contained_by Y.","definition_xrefs":["PMID:20226267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"_global:mereotopologically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps","secondary_identifiers":["RO:0002131"],"termid":"_global:overlaps"}


id: PBO:0076228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit pseudogene 1","termid":"PBO:0076228"}


id: PBO:0068813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 50, pseudogene","termid":"PBO:0068813"}


id: GO:0050236
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96656,110450],"is_not":false,"summary":null,"term":"GO:0050236"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pyridoxine = H+ + NADPH + pyridoxal.","definition_xrefs":["RHEA:16129","EC:1.1.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldo-keto reductase (NADP) activity","termid":"GO:0004033"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyridoxine:NADP 4-dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01708","MetaCyc:PYRIDOXINE-4-DEHYDROGENASE-RXN"],"synonyms":[{"name":"PL reductase activity","type":"related"},{"name":"pyridoxal reductase activity","type":"related"},{"name":"pyridoxin dehydrogenase activity","type":"related"},{"name":"pyridoxine dehydrogenase activity","type":"related"},{"name":"pyridoxine:NADP 4-oxidoreductase activity","type":"related"},{"name":"pyridoxol dehydrogenase activity","type":"related"}],"termid":"GO:0050236","terms_by_termid":{"GO:0050236":null}}


id: PBO:0063920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase interacting protein 1","termid":"PBO:0063920"}


id: GO:0050281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + glyoxylate = 3-hydroxypyruvate + glycine.","definition_xrefs":["MetaCyc:SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN","EC:2.6.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"serine-glyoxylate transaminase activity","secondary_identifiers":["RHEA:19125"],"synonyms":[{"name":"L-serine:glyoxylate aminotransferase activity","type":"related"},{"name":"SGAT activity","type":"related"},{"name":"serine--glyoxylate aminotransferase activity","type":"exact"}],"termid":"GO:0050281"}


id: GO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (6E,8Z,11Z,14Z)-(5S)-5-hydroperoxycosa-6,8,11,14-tetraenoate.","definition_xrefs":["EC:1.13.11.34","RHEA:32307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activity","secondary_identifiers":["Reactome:R-HSA-9025999","Reactome:R-HSA-9020264","Reactome:R-HSA-9018858","Reactome:R-HSA-266051","Reactome:R-HSA-9020259","Reactome:R-HSA-9020282","Reactome:R-HSA-9020256","Reactome:R-HSA-9018894","Reactome:R-HSA-9024997","Reactome:R-HSA-265296","Reactome:R-HSA-9020255","Reactome:R-HSA-9020278","Reactome:R-HSA-9025995","Reactome:R-HSA-9020251","Reactome:R-HSA-9025996","Reactome:R-HSA-9026405","Reactome:R-HSA-9027624","Reactome:R-HSA-9020277","Reactome:R-HSA-9027628","Reactome:R-HSA-9027633","Reactome:R-HSA-9018863","Reactome:R-HSA-9018859","Reactome:R-HSA-9026005","MetaCyc:ARACHIDONATE-5-LIPOXYGENASE-RXN"],"synonyms":[{"name":"5-delta-lipoxygenase activity","type":"related"},{"name":"5-lipoxygenase activity","type":"related"},{"name":"5Delta-lipoxygenase activity","type":"related"},{"name":"C-5-lipoxygenase activity","type":"related"},{"name":"LTA synthase activity","type":"narrow"},{"name":"arachidonate:oxygen 5-oxidoreductase activity","type":"related"},{"name":"arachidonic 5-lipoxygenase activity","type":"related"},{"name":"arachidonic acid 5-lipoxygenase activity","type":"related"},{"name":"delta(5)-lipoxygenase activity","type":"related"},{"name":"delta5-lipoxygenase activity","type":"related"},{"name":"leukotriene A4 synthase","type":"broad"},{"name":"leukotriene-A(4) synthase activity","type":"narrow"},{"name":"leukotriene-A4 synthase activity","type":"related"}],"termid":"GO:0004051"}


id: PBO:0060151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 2","termid":"PBO:0060151"}


id: GO:0046931
data:
  {"annotated_genes":["SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a pore complex. A pore complex is a small opening in a membrane that allows the passage of liquids and/or gases.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01833":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"pore complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pore biosynthesis","type":"exact"},{"name":"pore complex biogenesis","type":"related"},{"name":"pore formation","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0046931","terms_by_termid":{"GO:0051292":null}}


id: PBO:0031497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N-methyl-N'-nitro-N-nitrosoguanidine","termid":"PBO:0031497"}


id: PBO:0040928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3","termid":"PBO:0040928"}


id: PBO:0002648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mo25 family protein Pmo25","termid":"PBO:0002648"}


id: PBO:0109093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPO11 initiator of meiotic double strand breaks","termid":"PBO:0109093"}


id: PBO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.99.5","termid":"PBO:0002086"}


id: GO:0016905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myosin-heavy-chain = ADP + myosin-heavy-chain phosphate.","definition_xrefs":["EC:2.7.11.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calmodulin-dependent protein kinase activity","termid":"GO:0004683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0004672","GO:0003824","GO:0003674","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"myosin heavy chain kinase activity","secondary_identifiers":["RHEA:11424"],"synonyms":[{"name":"ATP:myosin heavy-chain O-phosphotransferase activity","type":"related"},{"name":"ATP:myosin-heavy-chain O-phosphotransferase activity","type":"related"},{"name":"MHCK","type":"related"},{"name":"MIHC kinase activity","type":"related"},{"name":"STK6","type":"related"},{"name":"calmodulin-dependent myosin heavy chain kinase activity","type":"related"},{"name":"myosin I heavy chain kinase activity","type":"narrow"},{"name":"myosin I heavy-chain kinase activity","type":"narrow"},{"name":"myosin II heavy chain kinase activity","type":"narrow"},{"name":"myosin II heavy-chain kinase activity","type":"narrow"},{"name":"myosin heavy chain kinase A activity","type":"related"},{"name":"myosin heavy-chain kinase activity","type":"related"},{"name":"myosin-heavy-chain kinase activity","type":"related"}],"termid":"GO:0016905"}


id: GO:0046594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of maintaining mRNA in a specific location in the oocyte pole plasm. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:dph","GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"maintenance of RNA location","termid":"GO:0051237"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"maintenance of pole plasm mRNA location","secondary_identifiers":["GO:0048122"],"synonyms":[{"name":"maintenance of oocyte pole plasm mRNA localization","type":"exact"},{"name":"maintenance of pole plasm mRNA localization","type":"related"}],"termid":"GO:0046594"}


id: PBO:0038391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_transcript","termid":"PBO:0038391"}


id: GO:0100036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates purine nucleotide biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100036)","termid":"GO:0100036"}


id: PR:O13846
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fatty acid 2-hydroxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12863:SF0","OMA:SCHPO01681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide very long chain fatty acid hydroxylase-like protein C19G12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.08","secondary_identifiers":["UniProtKB:O13846"],"synonyms":[{"name":"Spom972h-FA2H","type":"exact"}],"termid":"PR:O13846"}


id: PBO:0045670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 1","termid":"PBO:0045670"}


id: GO:0070543
data:
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id: PBO:0046623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 4","termid":"PBO:0046623"}


id: GO:0006511
data:
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id: GO:0048216
data:
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id: PBO:0017538
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor syndrome","termid":"PBO:0017538"}


id: PBO:0068111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 418","termid":"PBO:0068111"}


id: SO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_J_gene","synonyms":[{"name":"IG_joining_gene","type":"exact"},{"name":"Immunoglobulin_Joining_Gene","type":"exact"},{"name":"immunoglobulin_J_gene","type":"exact"}],"termid":"SO:0002125"}


id: PBO:0049543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2BC6 antisense RNA 1","termid":"PBO:0049543"}


id: GO:0001054
data:
  {"annotated_genes":["SJAG_02101","SJAG_01765","SJAG_01313","SJAG_03578","SJAG_03144","SJAG_01444","SJAG_04106","SJAG_02070","SJAG_04261","SJAG_00731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85061,87587,89547,98486,99163,101670,106633,109164,109855,110269],"is_not":false,"summary":null,"term":"GO:0001054"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase I specific promoter to direct initiation and catalyzes DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"RNA polymerase I activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0001054","terms_by_termid":{"GO:0001054":null}}


id: GO:0033267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of an axon, a cell projection of a neuron.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axon part (obsolete GO:0033267)","termid":"GO:0033267"}


id: GO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a fungus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of fungus","secondary_identifiers":["GO:0009599","GO:0016047"],"synonyms":[{"name":"detection of fungi","type":"exact"},{"name":"detection of parasitic fungi","type":"narrow"},{"name":"detection of parasitic fungus","type":"narrow"},{"name":"perception of fungi","type":"related"},{"name":"perception of fungus","type":"related"},{"name":"perception of parasitic fungi","type":"narrow"},{"name":"perception of parasitic fungus","type":"related"}],"termid":"GO:0016046"}


id: GO:1900571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diorcinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"diorcinol metabolic process","termid":"GO:1900570"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"diorcinol catabolic process","synonyms":[{"name":"diorcinol breakdown","type":"exact"},{"name":"diorcinol catabolism","type":"exact"},{"name":"diorcinol degradation","type":"exact"}],"termid":"GO:1900571"}


id: PBO:0031307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_vacuoles_during_vegetative_growth","termid":"PBO:0031307"}


id: PBO:0056067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latexin","termid":"PBO:0056067"}


id: PBO:0084702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial glyoxalase II; catalyzes the hydrolysis of S-D-lactoylglutathione into glutathione and D-lactate; GLO4 has a paralog, GLO2, that arose from the whole genome duplication","termid":"PBO:0084702"}


id: PBO:0061454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 5 group A member 2","termid":"PBO:0061454"}


id: PBO:0017942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine transmembrane transporter Can1","termid":"PBO:0017942"}


id: GO:0071228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor cell","termid":"GO:0071228"}


id: GO:0019920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of internal peptidyl-1-thioglycine, which has an internal C=S bond, instead of an internal C=O bond, in the peptide.","definition_xrefs":["RESID:AA0265","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine","termid":"GO:0018173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"peptidyl-1-thioglycine biosynthetic process, internal","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, internal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, internal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, internal","type":"exact"}],"termid":"GO:0019920"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: PBO:0031175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe,_elongated_cell","termid":"PBO:0031175"}


id: PBO:0082338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant","termid":"PBO:0082338"}


id: PBO:0091114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4","termid":"PBO:0091114"}


id: GO:0052597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a diamine + H2O + O2 = a monoamine + NH3 + hydrogen peroxide.","definition_xrefs":["MetaCyc:RXN-9599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"diamine oxidase activity","secondary_identifiers":["EC:1.4.3.22"],"synonyms":[{"name":"diamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052597"}


id: GO:0005624
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane fraction (obsolete GO:0005624)","synonyms":[{"name":"membrane fraction","type":"exact"}],"termid":"GO:0005624"}


id: PATO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light brown","termid":"PATO:0001246"}


id: PBO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 7 pseudogene","termid":"PBO:0062166"}


id: PBO:0071183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 24","termid":"PBO:0071183"}


id: PR:O74815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.04","synonyms":[{"name":"Spom972h-ppk27","type":"exact"}],"termid":"PR:O74815"}


id: PBO:0004004
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.15","termid":"PBO:0004004"}


id: PBO:0028126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_frequency_of_conjugation_with_h+_cells","termid":"PBO:0028126"}


id: PBO:0069221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 476, pseudogene","termid":"PBO:0069221"}


id: PR:Q10268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mac1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-anchored protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.04c","synonyms":[{"name":"Spom972h-mac1","type":"exact"}],"termid":"PR:Q10268"}


id: PATO:0015005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Slender and spirally coiled.","direct_ancestors":[{"relation_name":"has_part","term_name":"coiled","termid":"PATO:0000404"},{"relation_name":"has_part","term_name":"slender","termid":"PATO:0002212"},{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tendrilous","synonyms":[{"name":"tendril-like","type":"related"},{"name":"tendril-shaped","type":"related"},{"name":"tendrilled","type":"broad"}],"termid":"PATO:0015005"}


id: GO:0034715
data:
  {"annotated_genes":["SJAG_02843","SJAG_03469","SJAG_03279","SJAG_00147","SJAG_02304","SJAG_01301"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84975,90839,91273,98336,101740,106002],"is_not":false,"summary":null,"term":"GO:0034715"}]},"cv_name":"cellular_component","definition":"A protein complex that contains pICln (CLNS1A) and several Sm proteins, including SmD1, SmD2, SmE, SmF, and SmG.","definition_xrefs":["PMID:11713266","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_01301":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03279":null,"SJAG_03469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"pICln-Sm protein complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"6S pICln complex","type":"exact"}],"termid":"GO:0034715","terms_by_termid":{"GO:0034715":null}}


id: PBO:0063162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 7","termid":"PBO:0063162"}


id: PBO:0005826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyradoxal family membrane transporter (predicted)","termid":"PBO:0005826"}


id: MOD:01126
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos Cytidinyl","termid":"MOD:01126"}


id: FYPO:0000031
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115265,115597,115249,115279,115256,115260,115281,115255,115266,115263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000280"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is abnormal. Conjugation, also known as mating, is a process that results in the union of cellular and genetic information from cells of compatible mating types.","definition_xrefs":["GO:0000747","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_04009":null},"genotype_count":10,"genotypes_by_uniquename":{"byr1delta":{"display_name":"byr1delta","display_uniquename":"byr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00993:allele-1","expression":"Null"}]}]},"byr2delta":{"display_name":"byr2delta","display_uniquename":"byr2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01718:allele-1","expression":"Null"}]}]},"gap1delta":{"display_name":"gap1delta","display_uniquename":"gap1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02379:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"spk1delta":{"display_name":"spk1delta","display_uniquename":"spk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02923:allele-1","expression":"Null"}]}]},"ste11delta":{"display_name":"ste11delta","display_uniquename":"ste11delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04009:allele-1","expression":"Null"}]}]},"ste6delta":{"display_name":"ste6delta","display_uniquename":"ste6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02486:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mating","references_by_uniquename":{"PMID:29566183":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04009","SJAG_02379","SJAG_02486","SJAG_02592","SJAG_02923","SJAG_01794","SJAG_01718","SJAG_03453","SJAG_00514","SJAG_00993"],"single_locus_genotype_uniquenames":["scd1delta","sty1delta","ste6delta","byr1delta","spk1delta","byr2delta","ras1delta","scd2delta","ste11delta","gap1delta"],"synonyms":[{"name":"abnormal conjugation","type":"exact"},{"name":"abnormal conjugation with cellular fusion","type":"exact"},{"name":"abnormal zygote formation","type":"related"},{"name":"conjugation defects","type":"exact"}],"termid":"FYPO:0000031","terms_by_termid":{"FYECO:0000272":null,"FYPO:0000280":null,"FYPO_EXT:0000001":null}}


id: PBO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc34","termid":"PBO:0001710"}


id: PBO:0078783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 8-1","termid":"PBO:0078783"}


id: PBO:0111518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family member 1","termid":"PBO:0111518"}


id: PBO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0001320"}


id: PR:O14266
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec39 gene.","definition_xrefs":["UniProtKB:O14266","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec39 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.11c","synonyms":[{"name":"Spom972h-sec39","type":"exact"}],"termid":"PR:O14266"}


id: GO:1990338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha4, beta2 and gamma3 polypeptide chains.","definition_xrefs":["PMID:17453709","GOC:bhm","GOC:dph","PMID:15979864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-14 complex","synonyms":[{"name":"laminin-423","type":"exact"}],"termid":"GO:1990338"}


id: PBO:0089309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase GH125 family Mug157","termid":"PBO:0089309"}


id: PBO:0027219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_monomeric_ribosome_level","termid":"PBO:0027219"}


id: PBO:0040362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MK pseudogene 1","termid":"PBO:0040362"}


id: PBO:0090865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt2","termid":"PBO:0090865"}


id: PBO:0035990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_dimethylation_during_vegetative_growth","termid":"PBO:0035990"}


id: PBO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_chromosome_fragmentation_upon_segregation","termid":"PBO:0031091"}


id: GO:0021642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:jid","GOC:dph","ISBN:0838580343","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"trochlear nerve morphogenesis","termid":"GO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve formation","synonyms":[{"name":"CN IV biosynthesis","type":"related"},{"name":"CN IV formation","type":"related"}],"termid":"GO:0021642"}


id: PBO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1","termid":"PBO:0044319"}


id: GO:0010200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chitin","termid":"GO:0010200"}


id: PBO:0058888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10525","termid":"PBO:0058888"}


id: GO:0031065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylation (obsolete GO:0031065)","synonyms":[{"name":"activation of histone deacetylation","type":"narrow"},{"name":"stimulation of histone deacetylation","type":"narrow"},{"name":"up regulation of histone deacetylation","type":"exact"},{"name":"up-regulation of histone deacetylation","type":"exact"},{"name":"upregulation of histone deacetylation","type":"exact"}],"termid":"GO:0031065"}


id: PBO:0069687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 966, pseudogene","termid":"PBO:0069687"}


id: PBO:0091685
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated non-conserved ORF in low complexity region","termid":"PBO:0091685"}


id: GO:0022623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homohexameric complex that recognizes and unfolds core proteasome substrate proteins, and translocates them to the core complex in an ATP dependent manner.","definition_xrefs":["PMID:19363223","GOC:mtg_sensu","GOC:bf","PMID:19481528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome-activating nucleotidase complex","synonyms":[{"name":"PAN","type":"exact"}],"termid":"GO:0022623"}


id: PR:O94446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone acetyltransferase KAT5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.12c","secondary_identifiers":["UniProtKB:O94446"],"synonyms":[{"name":"Spom972h-KAT5","type":"exact"}],"termid":"PR:O94446"}


id: GO:1903022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:12192046","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:1903021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","synonyms":[{"name":"activation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"narrow"},{"name":"up regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"up-regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"upregulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"}],"termid":"GO:1903022"}


id: GO:0120014
data:
  {"annotated_genes":["SJAG_03416","SJAG_01225","SJAG_16459","SJAG_03172","SJAG_01305","SJAG_00576","SJAG_00230","SJAG_03746","SJAG_03721","SJAG_03338","SJAG_03741","SJAG_03710","SJAG_04370","SJAG_01229","SJAG_06440"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84734,86443,93201,94368,99890,101724,102632,103424,103559,105463],"is_not":false,"summary":null,"term":"GO:0120014"},{"annotations":[98015,97070,105449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[93266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[112333,93267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"}]},"cv_name":"molecular_function","definition":"Removes a phospholipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:20823909","PMID:24220498","PMID:25797198","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_04370":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0120013","GO:0003674"],"is_obsolete":false,"name":"phospholipid transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane phospholipid transfer activity","type":"narrow"},{"name":"phospholipid carrier activity","type":"exact"}],"termid":"GO:0120014","terms_by_termid":{"GO:0008526":null,"GO:0120014":null,"GO:0120019":null,"GO:1990050":null}}


id: GO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoteichoic acid.","definition_xrefs":["PMID:14665680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipoteichoic acid binding","termid":"GO:0070891"}


id: GO:0100062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription factor catabolic process process that positively_regulates SREBP signaling pathway.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of SREBP signaling pathway by transcription factor catabolic process (obsolete GO:0100062)","termid":"GO:0100062"}


id: MOD:01363
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-thiophospho-L-tyrosine.","definition_xrefs":["Unimod:260#Y","PubMed:12110917","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-thiophospho-L-tyrosine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01363"}


id: PBO:0060955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor alpha","termid":"PBO:0060955"}


id: PBO:0091230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane aquaporin family transmembrane transporter","termid":"PBO:0091230"}


id: GO:1905670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a TORC2 complex into its constituent components.","definition_xrefs":["GOC:kmv","GO_REF:0000079","GOC:TermGenie","PMID:21952218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"TORC2 complex disassembly","synonyms":[{"name":"TOR complex 2 disassembly","type":"exact"},{"name":"TORC 2 complex disassembly","type":"exact"},{"name":"TORC2 disassembly","type":"exact"},{"name":"mTORC2 disassembly","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex disassembly","type":"exact"}],"termid":"GO:1905670"}


id: GO:0002674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an acute inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"negatively_regulates","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acute inflammatory response","synonyms":[{"name":"down regulation of acute inflammatory response","type":"exact"},{"name":"down-regulation of acute inflammatory response","type":"exact"},{"name":"downregulation of acute inflammatory response","type":"exact"},{"name":"inhibition of acute inflammatory response","type":"narrow"}],"termid":"GO:0002674"}


id: GO:1900400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of iron ion import.","definition_xrefs":["PMID:18622392","GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900400)","synonyms":[{"name":"regulation of iron import by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of iron ion import by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:1900400"}


id: GO:0099179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adhesion between pre- and post-synaptic membranes.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synaptic membrane adhesion","termid":"GO:0099560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of synaptic membrane adhesion","synonyms":[{"name":"regulation of synapse adhesion between pre- and post-synapse","type":"exact"}],"termid":"GO:0099179"}


id: PBO:0091733
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to be a ribosomal protein","termid":"PBO:0091733"}


id: PBO:0080342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 106 pseudogene","termid":"PBO:0080342"}


id: PBO:0075036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-47","termid":"PBO:0075036"}


id: PBO:0079890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPP2 intronic transcript 1","termid":"PBO:0079890"}


id: PBO:0051552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 9 receptor pseudogene 2","termid":"PBO:0051552"}


id: PBO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine like 1","termid":"PBO:0044510"}


id: GO:0030570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.","definition_xrefs":["EC:4.2.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"pectate lyase activity","secondary_identifiers":["MetaCyc:4.2.2.2-RXN"],"synonyms":[{"name":"(1->4)-alpha-D-galacturonan lyase activity","type":"related"},{"name":"PGA lyase activity","type":"related"},{"name":"PPase-N activity","type":"related"},{"name":"alpha-1,4-D-endopolygalacturonic acid lyase activity","type":"related"},{"name":"endo-alpha-1,4-polygalacturonic acid lyase activity","type":"related"},{"name":"endogalacturonate transeliminase activity","type":"related"},{"name":"endopectin methyltranseliminase activity","type":"related"},{"name":"pectate transeliminase activity","type":"related"},{"name":"pectic acid lyase activity","type":"related"},{"name":"pectic acid transeliminase activity","type":"related"},{"name":"pectic lyase activity","type":"broad"},{"name":"pectin trans-eliminase activity","type":"broad"},{"name":"polygalacturonate lyase activity","type":"related"},{"name":"polygalacturonic acid lyase activity","type":"related"},{"name":"polygalacturonic acid trans-eliminase activity","type":"related"},{"name":"polygalacturonic transeliminase activity","type":"related"}],"termid":"GO:0030570"}


id: SO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_J_C_cluster","synonyms":[{"name":"V D DJ J C cluster","type":"exact"},{"name":"V-D-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000529"}


id: GO:0097004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adipokinetic hormone. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["GOC:sart","PMID:11904407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adipokinetic hormone binding","synonyms":[{"name":"AKH binding","type":"exact"}],"termid":"GO:0097004"}


id: PBO:0062269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily G member 5 pseudogene","termid":"PBO:0062269"}


id: GO:0098653
data:
  {"annotated_genes":["SJAG_02814","SJAG_01805","SJAG_04076","SJAG_02761","SJAG_03540","SJAG_05196","SJAG_02624","SJAG_00794","SJAG_03683","SJAG_02737","SJAG_01745","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113040,86873,98625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[112005,89431,98233,114226,105068,96144,94970,90982,114752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores become localized to clusters.","definition_xrefs":["PMID:23283988","PMID:8486732","PMID:10761928","GOC:dos","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"is_a","term_name":"centromere localization","termid":"GO:0072765"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098587"],"synonyms":[{"name":"kinetochore clustering","type":"exact"}],"termid":"GO:0098653","terms_by_termid":{"GO:0072766":null,"GO:1990571":null}}


id: GO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + S-adenosylmethioninamine = N1-aminopropylagmatine + 5'-methylthioadenosine.","definition_xrefs":["GOC:jl","PMID:15983049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"agmatine aminopropyltransferase activity","secondary_identifiers":["EC:2.5.1.104"],"synonyms":[{"name":"agmatine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043919"}


id: PR:Q9USX7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk22 gene.","definition_xrefs":["UniProtKB:Q9USX7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.09","synonyms":[{"name":"Spom972h-ppk22","type":"exact"}],"termid":"PR:Q9USX7"}


id: FYPO:0004701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a cell does not alter the timing or rate of cell division when shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PomBase:mah","PMID:689088","PMID:872891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"abolished cell division timing change upon nitrogen source shift","synonyms":[{"name":"abolished cell division rate change upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division rate upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division timing upon nitrogen source shift","type":"exact"},{"name":"abolished nutritional modulation of cell division","type":"related"},{"name":"unchanged cell division timing upon nitrogen source shift","type":"related"}],"termid":"FYPO:0004701"}


id: PBO:0075605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3","termid":"PBO:0075605"}


id: PBO:0059170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 1","termid":"PBO:0059170"}


id: PBO:0070581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 47","termid":"PBO:0070581"}


id: PBO:0052647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 15","termid":"PBO:0052647"}


id: PBO:0036069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_polymerization","termid":"PBO:0036069"}


id: FYPO:0007993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during the first meiotic nuclear division in which the localization of a protein to chromatin at the pericentromeric regions is dicreased.","definition_xrefs":["PomBase:mlr","PMID:18716626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to pericentromeric region during meiosis I","termid":"FYPO:0007993"}


id: PR:Q9UST9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC336.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.05c","synonyms":[{"name":"HEN1 methyltransferase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC336.05c","type":"exact"}],"termid":"PR:Q9UST9"}


id: PATO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Affecting all regions without specificity of distribution.","definition_xrefs":["PATOC:MPTH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized","synonyms":[{"name":"generalised","type":"exact"}],"termid":"PATO:0002403"}


id: PBO:0074802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13G","termid":"PBO:0074802"}


id: PBO:0085183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three alternate beta-subunits of the Snf1p kinase complex; may confer substrate specificity; vacuolar protein containing KIS (Kinase-Interacting Sequence) and ASC (Association with Snf1 kinase Complex) domains involved in protein interactions","termid":"PBO:0085183"}


id: PBO:0017578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1 (predicted)","termid":"PBO:0017578"}


id: PBO:0062217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AN member 1","termid":"PBO:0062217"}


id: GO:0003865
data:
  {"annotated_genes":["SJAG_02291","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95760,96432],"is_not":false,"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor.","definition_xrefs":["EC:1.3.99.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","termid":"GO:0033765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02291":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-469659","RHEA:13805","MetaCyc:1.3.99.5-RXN","Reactome:R-HSA-9705714","Reactome:R-HSA-9705713"],"synonyms":[{"name":"3-keto-delta4-steroid-5alpha-reductase activity","type":"related"},{"name":"3-oxo-5alpha-steroid 4-dehydrogenase activity","type":"related"},{"name":"3-oxo-5alpha-steroid delta4-dehydrogenase activity","type":"related"},{"name":"3-oxo-5alpha-steroid:(acceptor) delta4-oxidoreductase activity","type":"related"},{"name":"3-oxo-5alpha-steroid:acceptor delta4-oxidoreductase activity","type":"related"},{"name":"3-oxosteroid delta4-dehydrogenase","type":"broad"},{"name":"4-ene-3-ketosteroid-5alpha-oxidoreductase activity","type":"related"},{"name":"5alpha-reductase","type":"broad"},{"name":"delta4-3-keto steroid 5alpha-reductase activity","type":"related"},{"name":"delta4-3-ketosteroid5alpha-oxidoreductase activity","type":"related"},{"name":"delta4-3-oxo steroid reductase activity","type":"related"},{"name":"delta4-3-oxosteroid-5alpha-reductase","type":"broad"},{"name":"delta4-5alpha-dehydrogenase activity","type":"related"},{"name":"steroid 5 alpha reductase","type":"broad"},{"name":"steroid 5-alpha-reductase activity","type":"broad"},{"name":"steroid 5alpha-reductase","type":"broad"},{"name":"steroid delta4-5alpha-reductase activity","type":"related"},{"name":"testosterone 5alpha-reductase","type":"broad"}],"termid":"GO:0003865","terms_by_termid":{"GO:0003865":null}}


id: GO:0071034
data:
  {"annotated_genes":["SJAG_04360","SJAG_01521","SJAG_01064","SJAG_01830","SJAG_02622","SJAG_03939","SJAG_03745","SJAG_00701","SJAG_04321","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88680,91591],"is_not":false,"summary":null,"term":"GO:0071034"},{"annotations":[114194,111437,87796,108753,109289,107839,95515,98802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cryptic unstable transcripts (CUTs).","definition_xrefs":["GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CUT metabolic process","termid":"GO:0071043"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01521":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04321":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CUT catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cryptic unstable transcript catabolic process","type":"exact"}],"termid":"GO:0071034","terms_by_termid":{"GO:0071034":null,"GO:0071039":null}}


id: PBO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-18 (pseudogene)","termid":"PBO:0051340"}


id: GO:0044630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of the lectin pathway of complement activation, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, lectin pathway in another organism (obsolete GO:0044630)","synonyms":[{"name":"modulation of complement activation, lectin pathway in other organism","type":"exact"},{"name":"regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044630"}


id: GO:1904003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:16901790","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of sebum secreting cell proliferation","termid":"GO:1904002"},{"relation_name":"negatively_regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sebum secreting cell proliferation","synonyms":[{"name":"down regulation of sebocyte proliferation","type":"related"},{"name":"down regulation of sebum secreting cell proliferation","type":"exact"},{"name":"down-regulation of sebocyte proliferation","type":"related"},{"name":"down-regulation of sebum secreting cell proliferation","type":"exact"},{"name":"downregulation of sebocyte proliferation","type":"related"},{"name":"downregulation of sebum secreting cell proliferation","type":"exact"},{"name":"inhibition of sebocyte proliferation","type":"related"},{"name":"inhibition of sebum secreting cell proliferation","type":"narrow"},{"name":"negative regulation of sebocyte proliferation","type":"related"}],"termid":"GO:1904003"}


id: GO:0031952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of addition of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein autophosphorylation","synonyms":[{"name":"regulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031952"}


id: PBO:0028857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_mRNA_introns_with_low_A/U_content_and_polypyrimidine_tracts_distal_to_branch_site","termid":"PBO:0028857"}


id: PBO:0028529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_binding_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028529"}


id: GO:0039020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pronephric nephron tubule over time, from its formation to the mature structure. The pronephric nephron tubule is an epithelial tube that is part of the pronephric nephron and connects the filtration unit (glomerulus or glomus) of the pronephros to the pronephric duct.","definition_xrefs":["PMID:19909807","PMID:9268568","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron tubule development","termid":"GO:0039020"}


id: GO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0030036","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"myosin filament assembly","synonyms":[{"name":"myosin polymerization","type":"related"}],"termid":"GO:0031034"}


id: GO:2001129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a dimethylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}


id: GO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aldosterone into the circulatory system. Aldosterone is a pregnane-based steroid hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"aldosterone secretion","termid":"GO:0035932"}


id: GO:1900520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to pullulan.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to pullulan","termid":"GO:1900518"},{"relation_name":"positively_regulates","term_name":"response to pullulan","termid":"GO:0044592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to pullulan","synonyms":[{"name":"activation of response to pullulan","type":"narrow"},{"name":"up regulation of response to pullulan","type":"exact"},{"name":"up-regulation of response to pullulan","type":"exact"},{"name":"upregulation of response to pullulan","type":"exact"}],"termid":"GO:1900520"}


id: GO:0033746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 2 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:22483719","PMID:17947579","PMID:29233856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0032452","GO:0016491","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H3R2 demethylase activity","synonyms":[{"name":"histone H3-R2 demethylase activity","type":"exact"},{"name":"histone H3-methyl-arginine-2 demethylase activity","type":"exact"},{"name":"histone H3R2me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-R2 specific)","type":"exact"}],"termid":"GO:0033746"}


id: FYPO:0004988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels that normally vary over the course of the mitotic cell cycle do not vary, or change in a pattern different from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:15302827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"abnormal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"abnormal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"abnormal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004988"}


id: GO:0098922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the dense core granule membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"dense core granule membrane","termid":"GO:0032127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"}


id: PBO:0028453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_cell","termid":"PBO:0028453"}


id: PBO:0085744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in vesicular transport; mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi","termid":"PBO:0085744"}


id: PBO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MIZ","termid":"PBO:0000656"}


id: PR:000044736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe)","type":"exact"},{"name":"RNA polymerase II subunit 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"RNA polymerase II subunit B1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SPBC28F2.12","type":"related"},{"name":"Spom-rpb1","type":"exact"}],"termid":"PR:000044736"}


id: PBO:0057677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268a","termid":"PBO:0057677"}


id: GO:0062169
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"Any process that mediates the frequency, rate, or extent of plus-end directed microtubule sliding.","definition_xrefs":["PMID:21892183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"plus-end directed microtubule sliding","termid":"GO:0031535"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062169","terms_by_termid":{"GO:0062168":null}}


id: PBO:0078207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-9","termid":"PBO:0078207"}


id: GO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa bonds in small molecule substrates. Highly selective action to release kallidin (lysyl-bradykinin) from kininogen involves hydrolysis of Met-Xaa or Leu-Xaa. The rat enzyme is unusual in liberating bradykinin directly from autologous kininogens by cleavage at two Arg-Xaa bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue kallikrein activity (obsolete GO:0004293)","synonyms":[{"name":"bradykininogenase","type":"broad"},{"name":"callicrein","type":"related"},{"name":"depot-padutin","type":"related"},{"name":"dilminal D","type":"related"},{"name":"glandular kallikrein activity","type":"related"},{"name":"glumorin","type":"related"},{"name":"kallidinogenase","type":"broad"},{"name":"kidney kallikrein","type":"related"},{"name":"kininogenase","type":"broad"},{"name":"kininogenin activity","type":"related"},{"name":"onokrein P","type":"related"},{"name":"padreatin","type":"related"},{"name":"padutin","type":"related"},{"name":"pancreatic kallikrein","type":"related"},{"name":"salivary kallikrein","type":"related"},{"name":"submandibular kallikrein","type":"related"},{"name":"submaxillary kallikrein","type":"related"},{"name":"tissue kallikrein activity","type":"exact"},{"name":"urinary kallikrein","type":"related"},{"name":"urokallikrein","type":"related"}],"termid":"GO:0004293"}


id: PBO:0043152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 20","termid":"PBO:0043152"}


id: GO:0016153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-imidazolone-5-propanoate + H+ = trans-urocanate + H2O.","definition_xrefs":["EC:4.2.1.49","RHEA:13101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"urocanate hydratase activity","secondary_identifiers":["KEGG_REACTION:R02914","MetaCyc:UROCANATE-HYDRATASE-RXN","Reactome:R-HSA-70903"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase (urocanate-forming)","type":"related"},{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase activity","type":"related"},{"name":"imidazolonepropionate hydrolase activity","type":"related"},{"name":"urocanase activity","type":"related"}],"termid":"GO:0016153"}


id: PBO:0057626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1200","termid":"PBO:0057626"}


id: GO:0043256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha, beta and gamma. Provides an integral part of the structural scaffolding of basement membranes.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin complex","termid":"GO:0043256"}


id: FYPO:0003824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of caffeine and rapamycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to caffeine and rapamycin","synonyms":[{"name":"resistance to caffeine and rapamycin during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine and rapamycin during vegetative growth","type":"exact"},{"name":"resistance to caffeine and rapamycin in combination","type":"exact"},{"name":"resistant to caffeine and rapamycin","type":"exact"}],"termid":"FYPO:0003824"}


id: null:chado_properties:version
data:
  {"annotation_feature_type":"gene","cv_name":"chado_properties","definition":"Chado schema version","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"version","termid":"null:chado_properties:version"}


id: PBO:0052189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 2","termid":"PBO:0052189"}


id: GO:0030250
data:
  {"annotated_genes":["SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008048"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of guanylate cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activator activity","termid":"GO:0010853"},{"relation_name":"is_a","term_name":"guanylate cyclase regulator activity","termid":"GO:0030249"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"guanylate cyclase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"guanylin","type":"narrow"}],"termid":"GO:0030250","terms_by_termid":{"GO:0008048":null}}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: PBO:0036409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylglutamate synthase Arg6","termid":"PBO:0036409"}


id: GO:0015803
data:
  {"annotated_genes":["SJAG_05346","SJAG_03970","SJAG_03591","SJAG_02029","SJAG_04725","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98608,105967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[83560],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[88947,87275,94621],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of branched-chain amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Branched-chain amino acids are amino acids with a branched carbon skeleton without rings.","definition_xrefs":["GOC:ai","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02029":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04725":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"branched-chain amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1900755"],"synonyms":[{"name":"branched-chain aliphatic amino acid transport","type":"exact"},{"name":"branched-chain amino-acid anion transport","type":"exact"},{"name":"branched-chain amino-acid anions transport","type":"related"}],"termid":"GO:0015803","terms_by_termid":{"GO:1903714":null,"GO:1905533":null,"GO:1905534":null}}


id: GO:0052249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of RNA levels in other organism involved in symbiotic interaction (obsolete GO:0052249)","synonyms":[{"name":"modulation of RNA levels in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052249"}


id: PBO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD46 molecule pseudogene 1","termid":"PBO:0042326"}


id: SO:1000096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The insertion of one or more amino acids from the polypeptide, without affecting the surrounding sequence.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000096 sequence_variant_causing_amino_acid_insertion (obsolete SO:1000096)","synonyms":[{"name":"mutation causing amino acid insertion","type":"related"},{"name":"sequence variant causing amino acid insertion","type":"exact"}],"termid":"SO:1000096"}


id: GO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate + L-cysteine + L-valine + 3 ATP + H2O = N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 AMP + 3 diphosphate + 6 H+.","definition_xrefs":["EC:6.3.2.26","RHEA:23196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase activity","secondary_identifiers":["MetaCyc:6.3.2.26-RXN","KEGG_REACTION:R04870"],"synonyms":[{"name":"ACV synthetase activity","type":"broad"},{"name":"L-2-aminohexanedioate:L-cysteine:L-valine ligase (AMP-forming, valine-inverting)","type":"related"},{"name":"L-alpha-aminoadipyl-cysteinyl-valine synthetase activity","type":"related"},{"name":"L-delta-(alpha-aminoadipoyl)-L-cysteinyl-D-valine synthetase activity","type":"related"}],"termid":"GO:0050564"}


id: PBO:0064112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 2 (gene/pseudogene)","termid":"PBO:0064112"}


id: GO:1903326
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902370"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"regulation of tRNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903326","terms_by_termid":{"GO:1902370":null}}


id: GO:1900112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 trimethylation (obsolete GO:1900112)","termid":"GO:1900112"}


id: PBO:0080145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 1","termid":"PBO:0080145"}


id: PBO:0059974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 19","termid":"PBO:0059974"}


id: PBO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein (predicted)","termid":"PBO:0005176"}


id: FYPO:0006855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 37 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K37 methylation","synonyms":[{"name":"abnormal histone H3 K37 methylation","type":"exact"},{"name":"abnormal histone H3K37me","type":"exact"},{"name":"abnormal histone lysine H3 K37 methylation","type":"exact"}],"termid":"FYPO:0006855"}


id: PBO:0061587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin G2","termid":"PBO:0061587"}


id: PBO:0040469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase c subunit lysine N-methyltransferase","termid":"PBO:0040469"}


id: PBO:0068727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 16, pseudogene","termid":"PBO:0068727"}


id: GO:0062098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["PMID:27258785","GOC:aruk","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed necrotic cell death","termid":"GO:0062098"}


id: GO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + 2-(2-hydroxyacyl)sphingosine = UDP + 1-(beta-D-galactosyl)-2-(2-hydroxyacyl)sphingosine.","definition_xrefs":["EC:2.4.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyacylsphingosine 1-beta-galactosyltransferase activity","secondary_identifiers":["RHEA:10856","EC:2.4.1.47","MetaCyc:2.4.1.45-RXN"],"synonyms":[{"name":"UDP-galactose-ceramide galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:2-(2-hydroxyacyl)sphingosine 1-beta-D-galactosyl-transferase activity","type":"related"},{"name":"UDPgalactose-2-hydroxyacylsphingosine galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:2-(2-hydroxyacyl)sphingosine 1-beta-D-galactosyl-transferase activity","type":"related"},{"name":"UDPgalactose:2-2-hydroxyacylsphingosine galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:ceramide galactosyltransferase activity","type":"related"},{"name":"cerebroside synthase activity","type":"related"},{"name":"uridine diphosphogalactose-2-hydroxyacylsphingosine galactosyltransferase activity","type":"related"}],"termid":"GO:0003851"}


id: PBO:0073736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A3 antisense RNA 1","termid":"PBO:0073736"}


id: PBO:0090012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase Oar2","termid":"PBO:0090012"}


id: PBO:0002753
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed in M-type mating cells","termid":"PBO:0002753"}


id: PR:P22192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pac1 gene.","definition_xrefs":["UniProtKB:P22192","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand-specific pac1 ribonuclease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.11c","synonyms":[{"name":"Spom972h-pac1","type":"exact"},{"name":"protein hcs (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22192"}


id: GO:0098856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which lipids are taken up from the contents of the intestine.","definition_xrefs":["GOC:dos","PMID:18768481","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal lipid absorption","termid":"GO:0098856"}


id: PR:O59852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- inv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.11","synonyms":[{"name":"Saccharase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-inv1","type":"exact"},{"name":"beta-fructofuranosidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59852"}


id: FYPO:0004739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal actin cytoskeleton during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004739"}


id: PBO:0048326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 37","termid":"PBO:0048326"}


id: PBO:0030007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0030007"}


id: PBO:0077347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 87B","termid":"PBO:0077347"}


id: PBO:0071504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 7","termid":"PBO:0071504"}


id: GO:0005736
data:
  {"annotated_genes":["SJAG_02653","SJAG_01562","SJAG_01698","SJAG_03468","SJAG_04261","SJAG_01313","SJAG_02871","SJAG_03144","SJAG_03956","SJAG_02101","SJAG_03578","SJAG_02070","SJAG_01128","SJAG_01948","SJAG_01765","SJAG_01444","SJAG_04106","SJAG_00731"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83139,83140,85054,85902,87575,89535,91422,98331,98480,99156,100724,101661,105716,106630,109160,109545,109546,109845,110266,111584],"is_not":false,"summary":null,"term":"GO:0005736"}]},"cv_name":"cellular_component","definition":"RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005730","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase I complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase I activity","type":"related"},{"name":"DNA-directed RNA polymerase I complex","type":"exact"}],"termid":"GO:0005736","terms_by_termid":{"GO:0005736":null}}


id: FYPO:0004448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is observed in a particular location where it is not normally found during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"},{"relation_name":"output_of","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized protein during meiotic cell cycle","synonyms":[{"name":"mislocalised protein during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004448"}


id: PBO:0028937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-fluoroorotic_acid","termid":"PBO:0028937"}


id: PBO:0069937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1230, pseudogene","termid":"PBO:0069937"}


id: PBO:0080072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 36","termid":"PBO:0080072"}


id: PBO:0068029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 334","termid":"PBO:0068029"}


id: PBO:0072687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN domain containing 3B","termid":"PBO:0072687"}


id: GO:0022803
data:
  {"annotated_genes":["SJAG_01471","SJAG_01168","SJAG_02105","SJAG_02877","SJAG_04122","SJAG_00836","SJAG_MIT37","SJAG_01090","SJAG_02532","SJAG_00048","SJAG_03114","SJAG_05342","SJAG_02564","SJAG_07003","SJAG_03895","SJAG_00133","SJAG_04668","SJAG_05204","SJAG_03925","SJAG_00985","SJAG_02019","SJAG_02598","SJAG_MIT09","SJAG_00542","SJAG_05229","SJAG_04136","SJAG_02322","SJAG_00438","SJAG_01649","SJAG_00915","SJAG_MIT15","SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008519"},{"annotations":[95370,87909,110494,87970,91365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[91669,105307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[92817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015267"},{"annotations":[107635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[95371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[115089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015398"},{"annotations":[99604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[91367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[97609,88897,99491,115152,90498,89503,88469,92315,99520,104713,98846,103718,115147,84632,88468,103814,111927,115157,100847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[87910,87971,109985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[84998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a single solute from one side of a membrane to the other by a mechanism involving conformational change, either by facilitated diffusion or in a membrane potential dependent process if the solute is charged.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01168":null,"SJAG_01471":null,"SJAG_01649":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04136":null,"SJAG_04668":null,"SJAG_04731":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"passive transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0022814","Reactome:R-HSA-429767","Wikipedia:Facilitated_diffusion"],"synonyms":[{"name":"facilitated diffusion","type":"related"},{"name":"porters","type":"broad"},{"name":"uniporter activity z","type":"narrow"}],"termid":"GO:0022803","terms_by_termid":{"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0008308":null,"GO:0008331":null,"GO:0008381":null,"GO:0008519":null,"GO:0015267":null,"GO:0015275":null,"GO:0015398":null,"GO:0046933":null,"GO:0140135":null}}


id: FYPO:0002729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the total amount of DNA in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"DNA content increased","synonyms":[{"name":"increased DNA content","type":"exact"},{"name":"increased DNA level","type":"exact"}],"termid":"FYPO:0002729"}


id: GO:0035309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that subdivides the wing imaginal disc into the wing and notum (body wall) subfields, thus determining whether cells ultimately differentiate wing or notum-specific structures.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing and notum subfield formation","termid":"GO:0035309"}


id: FYPO:0008113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which introns are retained at some, but not all introns at a higher level with increased frequency. Weak donor sequences are more affected.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"increased intron retention","termid":"FYPO:0008113"}


id: PBO:0062800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein","termid":"PBO:0062800"}


id: PBO:0062721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily S member 1","termid":"PBO:0062721"}


id: GO:0044574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the starch utilization system complex, a complex of cell envelope-associated proteins that degrades glycan.","definition_xrefs":["PMID:21219452","PMID:19553672","GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"starch utilization system complex assembly","synonyms":[{"name":"SUS complex assembly","type":"exact"},{"name":"assembly of starch utilization system complex","type":"exact"}],"termid":"GO:0044574"}


id: PBO:0041912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene like 2","termid":"PBO:0041912"}


id: PBO:0014302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase sububit Gem1 (predicted)","termid":"PBO:0014302"}


id: PBO:0029016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-centromeric_outer_repeat_transcript-derived_siRNA_absent","termid":"PBO:0029016"}


id: GO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A germline specific spherical organelle, rich in membrane skeletal proteins. Precursor to the fusome.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"spectrosome","termid":"GO:0045170"}


id: SO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding glutaminyl tRNA (SO:0000260).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic_acid_tRNA_primary_transcript","synonyms":[{"name":"glutamic acid tRNA primary transcript","type":"exact"}],"termid":"SO:0000216"}


id: PBO:0050501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 1","termid":"PBO:0050501"}


id: GO:0047738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose + phosphate = alpha-D-glucose 1-phosphate + D-glucose.","definition_xrefs":["EC:2.4.1.20","MetaCyc:CELLOBIOSE-PHOSPHORYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cellobiose phosphorylase activity","secondary_identifiers":["RHEA:19493"],"synonyms":[{"name":"cellobiose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047738"}


id: GO:1900403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:17446861","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900403)","synonyms":[{"name":"negative regulation of amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900403"}


id: PBO:0026934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_horsetail_movement","termid":"PBO:0026934"}


id: PBO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein kinase activator Atg17","termid":"PBO:0000851"}


id: PBO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease, unknown 1 (predicted)","termid":"PBO:0000140"}


id: PBO:0038507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 2","termid":"PBO:0038507"}


id: PBO:0064276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H2","termid":"PBO:0064276"}


id: PBO:0056595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase 1B","termid":"PBO:0056595"}


id: GO:2000688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000688)","synonyms":[{"name":"positive regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"positive regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"positive regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000688"}


id: GO:1901895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an ATPase-coupled calcium transmembrane transporter activity.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:19708671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of ATPase-coupled calcium transmembrane transporter activity","termid":"GO:1901894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATPase-coupled calcium transmembrane transporter activity","synonyms":[{"name":"down regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"down regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"down regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"down regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"down regulation of calcium ABC transporter","type":"narrow"},{"name":"down regulation of calcium efflux ATPase","type":"narrow"},{"name":"down regulation of calcium pump","type":"broad"},{"name":"down regulation of calcium transporting ATPase activity","type":"exact"},{"name":"down regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"down regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"down regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"down regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"down regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"down-regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"down-regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"down-regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"down-regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"down-regulation of calcium ABC transporter","type":"narrow"},{"name":"down-regulation of calcium efflux ATPase","type":"narrow"},{"name":"down-regulation of calcium pump","type":"broad"},{"name":"down-regulation of calcium transporting ATPase activity","type":"exact"},{"name":"down-regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"down-regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"down-regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"down-regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"down-regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"downregulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"downregulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"downregulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"downregulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"downregulation of calcium ABC transporter","type":"narrow"},{"name":"downregulation of calcium efflux ATPase","type":"narrow"},{"name":"downregulation of calcium pump","type":"broad"},{"name":"downregulation of calcium transporting ATPase activity","type":"exact"},{"name":"downregulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"downregulation of calcium-transporting ATPase activity","type":"exact"},{"name":"downregulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"downregulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"downregulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"inhibition of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"inhibition of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"inhibition of Ca2+-pumping ATPase activity","type":"exact"},{"name":"inhibition of Ca2+-transporting ATPase activity","type":"exact"},{"name":"inhibition of calcium ABC transporter","type":"narrow"},{"name":"inhibition of calcium efflux ATPase","type":"narrow"},{"name":"inhibition of calcium pump","type":"broad"},{"name":"inhibition of calcium transporting ATPase activity","type":"exact"},{"name":"inhibition of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"inhibition of calcium-transporting ATPase activity","type":"narrow"},{"name":"inhibition of plasma membrane Ca-ATPase","type":"narrow"},{"name":"inhibition of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"inhibition of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"negative regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"negative regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"negative regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"negative regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"negative regulation of calcium ABC transporter","type":"narrow"},{"name":"negative regulation of calcium efflux ATPase","type":"narrow"},{"name":"negative regulation of calcium pump","type":"broad"},{"name":"negative regulation of calcium transporting ATPase activity","type":"exact"},{"name":"negative regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"negative regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"negative regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"negative regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"negative regulation of sarcoplasmic reticulum ATPase","type":"narrow"}],"termid":"GO:1901895"}


id: GO:0010182
data:
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id: GO:0005161
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id: PBO:0078776
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id: PR:Q9C0V4
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id: PBO:0055884
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id: GO:0065003
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id: GO:1901718
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id: FYPO:0006358
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id: PBO:0057159
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id: PATO:0002177
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id: PBO:0042108
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 181","termid":"PBO:0042108"}


id: PBO:0040557
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1","termid":"PBO:0040557"}


id: PBO:0074074
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id: PBO:0026780
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id: GO:0035517
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id: GO:0047351
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 GTP + H+ = P(1),P(4)-bis(5'-guanosyl) tetraphosphate + diphosphate + H+.","definition_xrefs":["RHEA:18153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GTP guanylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00012","EC:2.7.7.45","MetaCyc:2.7.7.45-RXN"],"synonyms":[{"name":"GTP:GTP guanylyltransferase activity","type":"broad"},{"name":"guanosine-triphosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0047351"}


id: GO:0023006
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an amino acid signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by amino acid (obsolete GO:0023006)","synonyms":[{"name":"signal initiation by amino acid","type":"exact"}],"termid":"GO:0023006"}


id: PBO:0056879
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 divergent transcript","termid":"PBO:0056879"}


id: GO:0046949
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id: GO:0097442
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite of a hippocampal CA3 pyramidal cell.","definition_xrefs":["NIF_Subcellular:nlx_subcell_1005001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"CA3 pyramidal cell dendrite","termid":"GO:0097442"}


id: PBO:0064011
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id: GO:0021541
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id: PBO:0063145
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATJ crumbs cell polarity complex component","termid":"PBO:0063145"}


id: FYECO:0000436
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cyanide-p-trifluoromethoxyphenylhydrazone was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FCCP","secondary_identifiers":["PMID:37590302"],"synonyms":[{"name":"carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"FYECO:0000436"}


id: GO:0019469
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id: PBO:0082356
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id: PBO:0090890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17","termid":"PBO:0090890"}


id: GO:0052833
data:
  {"annotated_genes":["SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65751],"is_not":false,"summary":null,"term":"GO:0052833"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol 4-phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol monophosphate phosphatase activity","termid":"GO:0052834"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol monophosphate 4-phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-10952","Reactome:R-HSA-1855211","RHEA:30735"],"synonyms":[{"name":"inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol-1(or 4)-phosphate phosphohydrolase activity","type":"broad"}],"termid":"GO:0052833","terms_by_termid":{"GO:0052833":null}}


id: GO:1900822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ergot alkaloid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen compound metabolic process","termid":"GO:0051171"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of ergot alkaloid biosynthetic process","synonyms":[{"name":"regulation of ergot alkaloid anabolism","type":"exact"},{"name":"regulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"regulation of ergot alkaloid formation","type":"exact"},{"name":"regulation of ergot alkaloid synthesis","type":"exact"}],"termid":"GO:1900822"}


id: GO:0006058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein metabolic process","termid":"GO:0006056"},{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mannoprotein catabolic process","synonyms":[{"name":"mannoprotein breakdown","type":"exact"},{"name":"mannoprotein catabolism","type":"exact"},{"name":"mannoprotein degradation","type":"exact"}],"termid":"GO:0006058"}


id: GO:0033592
data:
  {"annotated_genes":["SJAG_01643"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103204],"is_not":false,"summary":null,"term":"GO:0033592"}]},"cv_name":"molecular_function","definition":"An activity that facilitates the formation of a complementary double-stranded RNA molecule.","definition_xrefs":["PMID:7543843","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded RNA binding","termid":"GO:0003727"},{"relation_name":"is_a","term_name":"annealing activity","termid":"GO:0140666"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01643":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA strand annealing activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033592","terms_by_termid":{"GO:0033592":null}}


id: GO:0018780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dichloroacetate + H2O = 2 HCl + glyoxylate.","definition_xrefs":["UM-BBD_reactionID:r0383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dichloroacetate halidohydrolase activity","termid":"GO:0018780"}


id: PBO:0028903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028903"}


id: GO:0052409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (obsolete GO:0052409)","synonyms":[{"name":"metabolism by organism of cell wall cellulose in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052409"}


id: GO:2000460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of eukaryotic cell surface binding (obsolete GO:2000460)","synonyms":[{"name":"regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000460"}


id: GO:0031808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H2 histamine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled histamine receptor binding","termid":"GO:0031806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"H2 histamine receptor binding","synonyms":[{"name":"H2 histamine receptor ligand","type":"narrow"}],"termid":"GO:0031808"}


id: PBO:0090399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Smn1/Gem1","termid":"PBO:0090399"}


