# terms

id: FYPO:0004935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during exit from mitosis is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during exit from mitosis","synonyms":[{"name":"decreased RNA accumulation during exit from mitosis","type":"related"},{"name":"decreased RNA level during exit from mitosis during mitotic cell cycle","type":"exact"},{"name":"decreased RNA level during exit from mitosis during vegetative growth","type":"exact"},{"name":"decreased RNA level during mitotic M/G1 transition","type":"related"},{"name":"decreased RNA level during mitotic exit","type":"exact"},{"name":"decreased transcript level during exit from mitosis","type":"exact"},{"name":"reduced RNA level during exit from mitosis","type":"exact"}],"termid":"FYPO:0004935"}


id: FYPO:0003990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to DNA damage during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:15643072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damage","termid":"FYPO:0000265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to DNA damage during mitotic S phase","synonyms":[{"name":"decreased growth during cellular response to DNA damage during mitotic S phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to DNA damage during mitotic S phase","type":"exact"},{"name":"hypersensitive to DNA damage during mitotic S phase","type":"exact"},{"name":"sensitive to DNA damage during S phase of mitotic cell cycle","type":"related"},{"name":"sensitive to DNA damage during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0003990"}


id: GO:0007076
data:
  {"annotated_genes":["SJAG_03048","SJAG_05032","SJAG_01837","SJAG_00646","SJAG_03832","SJAG_01873","SJAG_03682","SJAG_00871","SJAG_05193","SJAG_03161","SJAG_03567","SJAG_03942","SJAG_00768","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87325,93472,98988,100475,102070,108028,109416,111993,112616,113797],"is_not":false,"summary":null,"term":"GO:0007076"},{"annotations":[107657,83473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990893"},{"annotations":[98175,112769],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00768":null,"SJAG_00871":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03682":null,"SJAG_03832":null,"SJAG_03942":null,"SJAG_05032":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007076","terms_by_termid":{"GO:0007076":null,"GO:1903380":null,"GO:1990893":null}}


id: GO:0097296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","termid":"GO:2001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","synonyms":[{"name":"activation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"activation of initiator caspase activity","type":"narrow"}],"termid":"GO:0097296"}


id: PBO:0055969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR binding FLII interacting protein 1 pseudogene 1","termid":"PBO:0055969"}


id: GO:0019669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"},{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0006091","GO:0044248"],"is_obsolete":false,"name":"anaerobic glycine catabolic process","synonyms":[{"name":"glycine fermentation","type":"exact"}],"termid":"GO:0019669"}


id: GO:1902349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloroquine stimulus.","definition_xrefs":["PMID:23922869","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chloroquine","termid":"GO:1902349"}


id: GO:1990278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of activity of the transcription factor MBF.","definition_xrefs":["PMID:11795845"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of MBF transcription factor activity (obsolete GO:1990278)","synonyms":[{"name":"positive regulation of MBF transcription factor activity","type":"exact"}],"termid":"GO:1990278"}


id: PBO:0048644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 4","termid":"PBO:0048644"}


id: PR:Q9HDV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine cleavage system H protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11715:SF0","OMA:SCHPO03446","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system H protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.01","secondary_identifiers":["UniProtKB:Q9HDV9"],"synonyms":[{"name":"Spom972h-GCSH","type":"exact"},{"name":"glycine decarboxylase complex subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV9"}


id: PBO:0073600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 1","termid":"PBO:0073600"}


id: PBO:0004077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GDP/GTP exchange factor","termid":"PBO:0004077"}


id: GO:0003004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The menstrual cycle process in which one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells is formed as part of the antral spaces stage of oogenesis.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular fluid formation in ovarian follicle antrum","termid":"GO:0001548"},{"relation_name":"part_of","term_name":"distinct antral spaces stage","termid":"GO:0048164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum involved in distinct antral spaces stage","synonyms":[{"name":"follicular fluid formation in ovarian follicle antrum during distinct antral spaces stage","type":"related"}],"termid":"GO:0003004"}


id: GO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation involved in immune response","synonyms":[{"name":"T cell activation during immune response","type":"related"},{"name":"T lymphocyte activation during immune response","type":"related"},{"name":"T-cell activation during immune response","type":"related"},{"name":"T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002286"}


id: PR:O94591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.01c gene.","definition_xrefs":["UniProtKB:O94591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.01c","synonyms":[{"name":"Spom972h-SPCC622.01c","type":"exact"}],"termid":"PR:O94591"}


id: PBO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 2","termid":"PBO:0075320"}


id: GO:0031584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of inactive phospholipase D.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipase activity","termid":"GO:0010518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of phospholipase D activity","termid":"GO:0031584"}


id: PBO:0027614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype_following_normal_mitosis","termid":"PBO:0027614"}


id: GO:0042840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate catabolic process","termid":"GO:0006064"},{"relation_name":"is_a","term_name":"D-glucuronate metabolic process","termid":"GO:0042839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"D-glucuronate catabolic process","secondary_identifiers":["MetaCyc:PWY-7247","MetaCyc:PWY-6501","MetaCyc:PWY-8390","MetaCyc:PWY-5525"],"synonyms":[{"name":"D-glucuronate breakdown","type":"exact"},{"name":"D-glucuronate catabolism","type":"exact"},{"name":"D-glucuronate degradation","type":"exact"}],"termid":"GO:0042840"}


id: GO:0070156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling phenylalanine to phenylalanyl-tRNA in a mitochondrion, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylalanyl-tRNA aminoacylation","termid":"GO:0006432"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0006399","GO:0010467","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA aminoacylation","termid":"GO:0070156"}


id: PBO:0045882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 6","termid":"PBO:0045882"}


id: PBO:0074753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 112","termid":"PBO:0074753"}


id: PBO:0045358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidase 2","termid":"PBO:0045358"}


id: PBO:0085711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in spore wall assembly; has similarity to 1,3-beta-D-glucan synthase catalytic subunits Fks1p and Gsc2p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085711"}


id: GO:0043548
data:
  {"annotated_genes":["SJAG_01876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75411],"is_not":false,"summary":null,"term":"GO:0043548"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylinositol 3-kinase, any enzyme that catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring.","definition_xrefs":["PMID:9255069","PMID:10209156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PI3K binding","type":"exact"},{"name":"phosphoinositide 3-kinase binding","type":"exact"}],"termid":"GO:0043548","terms_by_termid":{"GO:0043548":null}}


id: PBO:0038792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 2","termid":"PBO:0038792"}


id: GO:0033594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyisoflavone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroxyisoflavone","termid":"GO:0033594"}


id: PBO:0045918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 13","termid":"PBO:0045918"}


id: PBO:0034744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complx UBX domain protein Ubx2","termid":"PBO:0034744"}


id: GO:0047529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-2,3-dimethylmalate = propanoate + pyruvate.","definition_xrefs":["EC:4.1.3.32","RHEA:10472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2,3-dimethylmalate lyase activity","secondary_identifiers":["MetaCyc:23-DIMETHYLMALATE-LYASE-RXN","KEGG_REACTION:R01355"],"synonyms":[{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase (propanoate-forming)","type":"related"},{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase activity","type":"related"},{"name":"2,3-dimethylmalate pyruvate-lyase activity","type":"related"}],"termid":"GO:0047529"}


id: GO:0000404
data:
  {"annotated_genes":["SJAG_02226","SJAG_01262","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96348,101819,101953],"is_not":false,"summary":null,"term":"GO:0000404"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing a loop. A loop occurs when DNA contains a large insertion or deletion that causes a region of unpaired single-stranded DNA to loop out, while the rest of the DNA is in a paired double-stranded configuration.","definition_xrefs":["PMID:16781730","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"},{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01262":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heteroduplex DNA loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"loop DNA binding","type":"related"}],"termid":"GO:0000404","terms_by_termid":{"GO:0000404":null}}


id: GO:0015176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall of bacteria, where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some catalyze export of nucleases.","definition_xrefs":["TC:1.A.38.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete holin (obsolete GO:0015176)","synonyms":[{"name":"holin","type":"exact"}],"termid":"GO:0015176"}


id: PBO:0027659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_cellular_response_to_hydroxyurea","termid":"PBO:0027659"}


id: GO:0019847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to inhibit neural function in another living organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotoxin activity (obsolete GO:0019847)","synonyms":[{"name":"neurotoxin activity","type":"exact"}],"termid":"GO:0019847"}


id: GO:2000761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of N-terminal peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-lysine acetylation","termid":"GO:2000758"},{"relation_name":"is_a","term_name":"regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000759"},{"relation_name":"positively_regulates","term_name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"positive regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000761"}


id: FYPO:0002344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity phleomycin. Cells stop growing (and may die) at a concentration of phleomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to phleomycin","synonyms":[{"name":"hypersensitive to phleomycin","type":"exact"},{"name":"sensitive to phleomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to phleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0002344"}


id: GO:2000821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of grooming behavior.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"grooming behavior","termid":"GO:0007625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of grooming behavior","synonyms":[{"name":"regulation of grooming behaviour","type":"exact"}],"termid":"GO:2000821"}


id: GO:0075212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its transmembrane receptor-mediated cAMP signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transmembrane receptor-mediated cAMP signal transduction in response to host (obsolete GO:0075212)","synonyms":[{"name":"positive regulation of symbiont transmembrane receptor-mediated cAMP signal transduction in response to host","type":"related"}],"termid":"GO:0075212"}


id: PBO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase (predicted)","termid":"PBO:0000248"}


id: GO:0061741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chaperone-mediated protein transport process in which a protein that is bound to a chaperone and a lysosomal receptor is unfolded and transported into the lysosome as part of chaperone-mediated autophagy.","definition_xrefs":["GOC:pad","GOC:dph","GOC:autophagy","GOC:PARL","PMID:22748206"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone-mediated protein transport involved in chaperone-mediated autophagy (obsolete GO:0061741)","termid":"GO:0061741"}


id: PR:Q8X1T0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A desumoylating isopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01966","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSI-like protein sdu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.06","secondary_identifiers":["UniProtKB:Q8X1T0"],"synonyms":[{"name":"Spom972h-DESI2","type":"exact"},{"name":"meiotically up-regulated gene 67 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8X1T0"}


id: PBO:0055013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2428","termid":"PBO:0055013"}


id: PBO:0039061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 10","termid":"PBO:0039061"}


id: GO:0002945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin Kand cyclin-dependent kinase 13 (CDK13). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:22012619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin K-CDK13 complex","synonyms":[{"name":"CycK/Cdk13 complex","type":"related"}],"termid":"GO:0002945"}


id: PR:Q92367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1652.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid permease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1652.02","synonyms":[{"name":"Spom972h-SPBC1652.02","type":"exact"}],"termid":"PR:Q92367"}


id: PBO:0072706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 3","termid":"PBO:0072706"}


id: PBO:0041023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 6","termid":"PBO:0041023"}


id: CHEBI:30911
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucitol","termid":"CHEBI:30911"}


id: GO:0004491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyl-3-oxopropanoate + CoA + NAD+ = propanoyl-CoA + CO2 + NADH + H+. Can also use malonate (3-oxopropanoate) as a substrate. The reaction occurs in two steps with the decarboxylation process preceding CoA-binding. Bicarbonate rather than CO2 is released as a final product.","definition_xrefs":["EC:1.2.1.27","PMID:2768248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity","secondary_identifiers":["Reactome:R-HSA-70893","MetaCyc:1.2.1.27-RXN"],"synonyms":[{"name":"MMSA dehydrogenase activity","type":"related"},{"name":"MSDH activity","type":"related"},{"name":"methylmalonate-semialdehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0004491"}


id: GO:0035525
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer of NF-kappa B p50 and p65 subunits.","definition_xrefs":["GO:add","PMID:20393192","PMID:9299584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NF-kappaB complex","termid":"GO:0071159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"NF-kappaB p50/p65 complex","synonyms":[{"name":"NF-kappa p105/p65 complex","type":"related"},{"name":"NF-kappa p50/RelA complex","type":"exact"},{"name":"NF-kappa B1/RelA complex","type":"exact"},{"name":"NF-kappa B1/p65 complex","type":"exact"},{"name":"NF-kappa p105/RelA complex","type":"related"}],"termid":"GO:0035525"}


id: PBO:0079040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-2","termid":"PBO:0079040"}


id: GO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"carbohydrate-importing ABC transporter activity","secondary_identifiers":["TC:3.A.1.1.1"],"synonyms":[{"name":"carbohydrate uptake transporter activity","type":"exact"},{"name":"carbohydrate-importing ATPase activity","type":"broad"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015608"}


id: PBO:0090898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA complex WD repeat subunit Asa1","termid":"PBO:0090898"}


id: GO:0071986
data:
  {"annotated_genes":["SJAG_01032","SJAG_03089","SJAG_03928","SJAG_00688"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88503,89692,100976,103756],"is_not":false,"summary":null,"term":"GO:0071986"}]},"cv_name":"cellular_component","definition":"A vacuolar membrane-anchored guanine nucleotide exchange factor (GEF) complex for the Rag GTPases (Gtr1-Gtr2 GTPase complex GO:1990131) in TORC1 signaling pathway. In human, Ragulator is comprised of the membrane anchor subunit LAMTOR1 (Meh1p in S. cerevisiae, Lam1 in S. pombe), a GEF subunit LAMTOR2 ( Slm4 in S. cerevisiae , Lam2 in S. pombe ) , LAMTOR3 (no S. cerevisiae ortholog identified, Lam3 in S. pombe) , LAMTOR4 (no S. cerevisiae ortholog identified, Lam4 in S. pombe), and LAMTOR5 (no S. cerevisiae or S. pombe ortholog identified).","definition_xrefs":["PMID:22980980","PMID:15989961","PMID:19177150","PMID:19748353","PMID:20381137","PMID:16732272","PMID:29199950","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00688":null,"SJAG_01032":null,"SJAG_03089":null,"SJAG_03928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"Ragulator complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034448","GO:0034449"],"synonyms":[{"name":"EGO complex","type":"related"},{"name":"EGO-GSE complex","type":"related"},{"name":"GSE complex","type":"related"},{"name":"GTPase-containing complex for Gap1p sorting in the endosome","type":"related"},{"name":"MAPKSP1/ROBLD3/C11orf59 complex","type":"exact"},{"name":"Rag GEF","type":"exact"}],"termid":"GO:0071986","terms_by_termid":{"GO:0071986":null}}


id: GO:0018314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent cross-linking of pyrroloquinoline-quinone to peptidyl-glutamic acid and peptidyl-tyrosine.","definition_xrefs":["RESID:AA0283","PMID:7665488"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-pyrroloquinoline-quinone linkage (obsolete GO:0018314)","synonyms":[{"name":"protein-pyrroloquinoline-quinone linkage","type":"exact"}],"termid":"GO:0018314"}


id: internal:description
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"description","termid":"internal:description"}


id: PBO:0002848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial FUN14 family protein","termid":"PBO:0002848"}


id: SO:0000520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VDJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VDJ_gene_segment","termid":"SO:0000574"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VDJ_C_cluster","synonyms":[{"name":"V VDJ C cluster","type":"exact"},{"name":"V-(VDJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000520"}


id: GO:0160120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex that catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. The complex is organized around a 24-meric cubic core of the dihydrolipoyl transacylase (E2) with multiple (about 6 to 12) copies of the branched-chain alpha-ketoacid dehydrogenase (E1, consisting of alpha and beta subunits), about 6 copies of the dimeric dihydrolipoyl dehydrogenase (E3), and a small number of copies of the E1-specific kinase and phosphatase.","definition_xrefs":["PMID:10745006","PMID:9582350","PMID:3593587"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial branched-chain alpha-keto acid dehydrogenase complex (obsolete GO:0160120)","synonyms":[{"name":"BCKD complex","type":"exact"}],"termid":"GO:0160120"}


id: PBO:0077732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 1","termid":"PBO:0077732"}


id: PATO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having fewer processual parts.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extra or missing processual parts","termid":"PATO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"having decreased processual parts","termid":"PATO:0001570"}


id: GO:1902088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any plant-type cell wall loosening that is involved in abscission.","definition_xrefs":["GOC:TermGenie","PMID:23479623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall loosening","termid":"GO:0009828"},{"relation_name":"is_a","term_name":"cell wall modification involved in abscission","termid":"GO:0009830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall loosening involved in abscission","synonyms":[{"name":"cellulose and pectin-containing cell wall loosening involved in abscission","type":"exact"}],"termid":"GO:1902088"}


id: PBO:0072335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 21","termid":"PBO:0072335"}


id: PBO:0083135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; regulates growth, sporulation, and glycogen accumulation in a cAMP-dependent protein kinase cascade dependent manner; mutants are defective in 60S ribosome assembly; positively regulates pre-autophagosomal structure (PAS) formation upon nitrogen starvation or rapamycin treatment","termid":"PBO:0083135"}


id: GO:0060867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of a fruit.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit abscission","termid":"GO:0060867"}


id: PBO:0069191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 445, pseudogene","termid":"PBO:0069191"}


id: PBO:0018284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator Fub2 (predicted)","termid":"PBO:0018284"}


id: SO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence from the end of a PAC clone that may provide a highly specific marker.","definition_xrefs":["ZFIN:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"PAC","termid":"SO:0000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC_end","synonyms":[{"name":"PAC end","type":"exact"}],"termid":"SO:0001480"}


id: PBO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 1","termid":"PBO:0043051"}


id: PBO:0027814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_chromosomes_during_meiosis_I","termid":"PBO:0027814"}


id: FYPO:0001204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells enter mitosis earlier or later than normal, relative to cell size or DNA integrity checkpoint status.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000337","FYPO:0000631"],"is_obsolete":false,"name":"mistimed mitosis","synonyms":[{"name":"abnormal onset of mitosis","type":"exact"},{"name":"mistimed mitosis during mitotic cell cycle","type":"related"},{"name":"mistimed mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0001204"}


id: PBO:0041734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase kinase 2","termid":"PBO:0041734"}


id: PBO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 3","termid":"PBO:0071770"}


id: GO:0044255
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id: GO:0033491
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id: PR:P87235
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id: FYPO:0006504
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id: FYPO:0008066
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id: PBO:0075097
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id: PBO:0071684
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id: PBO:0087722
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id: PR:P0C8R3
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi5 gene.","definition_xrefs":["UniProtKB:P0C8R3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-40S ribosomal protein S27b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.10c","synonyms":[{"name":"Spom972h-ubi5","type":"exact"}],"termid":"PR:P0C8R3"}


id: PBO:0068012
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id: GO:0071476
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id: PBO:0077917
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id: GO:0102768
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id: PBO:0075449
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id: GO:0023056
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id: FYPO:0000839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, has no septum, is elongated, and is inviable. Progression through the mitotic cell cycle is arrested in all inviable elongated mononucleate aseptate cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"inviable elongated aseptate cell","termid":"FYPO:0002066"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"elongated mononucleate aseptate vegetative cell","termid":"FYPO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000631","FYPO:0000002","FYPO:0000005","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell","secondary_identifiers":["FYPO:0004923"],"synonyms":[{"name":"cell cycle-arrested elongated inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest","type":"exact"},{"name":"elongated mononucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with arrested cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest","type":"exact"},{"name":"lethal; elongated mononucleate aseptate cell","type":"exact"},{"name":"long aseptate mononucleate cell","type":"exact"},{"name":"mitotic cell cycle arrest with elongated inviable mononucleate aseptate cell","type":"exact"}],"termid":"FYPO:0000839"}


id: GO:1990040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialization of the hypolemmal cisterna consisting of either single profiles or closely apposed stacks of endoplasmic reticulum in which the lumen is obliterated, lying 10-20 nm beneath the plasma membrane.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao128470897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypolemmal cisterna","termid":"GO:1990039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"sub-surface cisterna","synonyms":[{"name":"sub-surface cisternae","type":"exact"}],"termid":"GO:1990040"}


id: PBO:0029717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication","termid":"PBO:0029717"}


id: PBO:0062690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily AB member 1 pseudogene","termid":"PBO:0062690"}


id: PR:P40899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.05","synonyms":[{"name":"Spom972h-isp3","type":"exact"},{"name":"meiotic expression up-regulated protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40899"}


id: GO:0050401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.82","RHEA:19157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"xylonate dehydratase activity","secondary_identifiers":["MetaCyc:XYLONATE-DEHYDRATASE-RXN","KEGG_REACTION:R02429"],"synonyms":[{"name":"D-xylo-aldonate dehydratase activity","type":"related"},{"name":"D-xylonate dehydratase activity","type":"related"},{"name":"D-xylonate hydro-lyase (2-dehydro-3-deoxy-D-xylonate-forming)","type":"related"},{"name":"D-xylonate hydro-lyase activity","type":"related"}],"termid":"GO:0050401"}


id: FYPO:0000737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic spindle assembly","synonyms":[{"name":"abnormal spindle assembly involved in meiosis","type":"exact"}],"termid":"FYPO:0000737"}


id: GO:0032865
data:
  {"annotated_genes":["SJAG_03416","SJAG_01305","SJAG_04370","SJAG_01929","SJAG_03710"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86434,101717,103418,103553,112704],"is_not":false,"summary":null,"term":"GO:0032865"}]},"cv_name":"cellular_component","definition":"A protein complex that links the endoplasmic reticulum with mitochondria and may have a role in promoting exchange of calcium and phospholipids between the two organelles.","definition_xrefs":["PMID:29279306","PMID:19556461","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"mitochondria-associated endoplasmic reticulum membrane","termid":"GO:0044233"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0032991","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"ERMES complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondria encounter structure","type":"exact"},{"name":"MMM1 complex","type":"exact"},{"name":"Mdm10/Mdm12/Mmm1 complex","type":"exact"},{"name":"mitochore","type":"exact"}],"termid":"GO:0032865","terms_by_termid":{"GO:0032865":null}}


id: PBO:0017952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex substrate recognition subunit Apc10","termid":"PBO:0017952"}


id: PBO:0109114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 8, tRNA N3-cytidine","termid":"PBO:0109114"}


id: PBO:0055230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2656","termid":"PBO:0055230"}


id: GO:1902199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["PMID:11231285","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"3-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0006629","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-methylbut-2-enoyl-CoA(4-) catabolic process","synonyms":[{"name":"3-methylbut-2-enoyl-CoA(4-) breakdown","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) catabolism","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902199"}


id: GO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deletion of B cells by apoptotic process occurring as part of central tolerance induction and B cell selection.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jal","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deletion","termid":"GO:0002516"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"part_of","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell deletion","synonyms":[{"name":"central B lymphocyte deletion","type":"exact"},{"name":"central B-cell deletion","type":"exact"},{"name":"central B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002342"}


id: GO:0045108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly or disassembly of intermediate filaments by the addition or removal of monomers from a filament; this usually occurs through the opposing action of kinases and phosphatases.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate filament polymerization or depolymerization","termid":"GO:0045108"}


id: PBO:0073539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 1","termid":"PBO:0073539"}


id: GO:0051924
data:
  {"annotated_genes":["SJAG_04551","SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109392,86746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[97944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium transport","type":"exact"}],"termid":"GO:0051924","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PBO:0046661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"espin like","termid":"PBO:0046661"}


id: GO:1904745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an Atg1/UKL1 kinase complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:dph","PMID:25139988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"ATG1 kinase complex assembly","type":"exact"},{"name":"ATG1 kinase complex formation","type":"exact"},{"name":"ATG1-ATG13 complex assembly","type":"exact"},{"name":"ATG1-ATG13 complex formation","type":"exact"},{"name":"ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"Atg1p signalling complex assembly","type":"exact"},{"name":"Atg1p signalling complex formation","type":"exact"},{"name":"ULK1 signaling complex assembly","type":"exact"},{"name":"ULK1 signaling complex formation","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1904745"}


id: PBO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A1","termid":"PBO:0060690"}


id: GO:0009877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of nitrogen-fixing root nodules on plant roots.","definition_xrefs":["PMID:21856632","PMID:33317178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nodulation","secondary_identifiers":["GO:0009878"],"synonyms":[{"name":"nodule morphogenesis","type":"related"},{"name":"nodule formation","type":"exact"},{"name":"nodule development","type":"exact"}],"termid":"GO:0009877"}


id: PBO:0057703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1290","termid":"PBO:0057703"}


id: PBO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as pseudogene","termid":"PBO:0000145"}


id: GO:0006237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxycytidine, 2-deoxyribosylcytosine, from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside salvage","termid":"GO:0043099"},{"relation_name":"is_a","term_name":"deoxycytidine biosynthetic process","termid":"GO:0046093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxycytidine salvage","termid":"GO:0006237"}


id: GO:0072356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a chromosome passenger complex; as a result, the complex is transported to, or maintained in, a specific location at the kinetochore. A chromosome passenger complex is a protein complex that contains the BIR-domain-containing protein Survivin, Aurora B kinase, INCENP and Borealin, and coordinates various events based on its location to different structures during the course of mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chromosome passenger complex localization to kinetochore","synonyms":[{"name":"CPC complex localization to kinetochore","type":"exact"},{"name":"CPC localization to kinetochore","type":"exact"},{"name":"chromosomal passenger complex localization to kinetochore","type":"exact"},{"name":"chromosome passenger complex localisation to kinetochore","type":"related"}],"termid":"GO:0072356"}


id: PBO:0069702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 982, pseudogene","termid":"PBO:0069702"}


id: GO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 2 (NOD2) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["GOC:add","PMID:17944960","PMID:18585455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"NOD2 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070431"}


id: GO:0016010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase.","definition_xrefs":["PMID:16710609","PMID:15117830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein complex","termid":"GO:0090665"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"dystrophin-associated glycoprotein complex","synonyms":[{"name":"DGC","type":"exact"},{"name":"dystrophin glycoprotein complex","type":"exact"}],"termid":"GO:0016010"}


id: PBO:0052383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 24","termid":"PBO:0052383"}


id: GO:0016471
data:
  {"annotated_genes":["SJAG_01913","SJAG_03406","SJAG_01817","SJAG_04015","SJAG_01397","SJAG_04955","SJAG_01447","SJAG_00212","SJAG_05294","SJAG_01471","SJAG_02023","SJAG_02782","SJAG_00516","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85352,85679,99749,91333,95685,87600],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[94660,95762,114814,105809,97425,98469,83503,92307],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen.","definition_xrefs":["GOC:mah","ISBN:0716743663","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005773"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0016471","terms_by_termid":{"GO:0000220":null,"GO:0000221":null}}


id: PBO:0088602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7,8-diamino-pelargonic acid aminotransferase (DAPA)","termid":"PBO:0088602"}


id: GO:1901248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"},{"relation_name":"positively_regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung ciliated cell differentiation","synonyms":[{"name":"activation of lung ciliated cell differentiation","type":"narrow"},{"name":"up regulation of lung ciliated cell differentiation","type":"exact"},{"name":"up-regulation of lung ciliated cell differentiation","type":"exact"},{"name":"upregulation of lung ciliated cell differentiation","type":"exact"}],"termid":"GO:1901248"}


id: PBO:0064152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 4","termid":"PBO:0064152"}


id: GO:0044648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 4 of the histone.","definition_xrefs":["PMID:21875999","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 dimethylation (obsolete GO:0044648)","termid":"GO:0044648"}


id: PBO:0003018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane transporter, pseudogene","termid":"PBO:0003018"}


id: FYPO:0002664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to stress responsive gene mRNA","type":"exact"},{"name":"increased level of stress response gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"increased level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"increased mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"increased stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002664"}


id: FYPO:0001764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C48, C49, C60, C61 and C62 residues in a tRNA-Asp molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation","synonyms":[{"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation during vegetative growth","type":"exact"},{"name":"normal tRNA-Asp methylation on C48, C49, C60, C61 and C62","type":"exact"}],"termid":"FYPO:0001764"}


id: FYPO:0003124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is abnormal. Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["GO:0002183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abnormal cytoplasmic translation","synonyms":[{"name":"abnormal cytoplasmic protein biosynthesis","type":"exact"},{"name":"abnormal cytoplasmic protein synthesis","type":"exact"},{"name":"abnormal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0003124"}


id: FYPO:0006340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis occurs only at the old end of the cell during interphase of the mitotic cell cycle. Normally, endocytosis takes place at the old cell end throughout interphase, and also at the new end after NETO.","definition_xrefs":["PomBase:mah","PMID:16141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"endocytosis restricted to old cell end","synonyms":[{"name":"endocytosis abolished at new cell end","type":"exact"},{"name":"endocytosis restricted to old cell end during interphase of mitotic cell cycle","type":"exact"},{"name":"endocytosis restricted to old cell end during mitotic interphase","type":"exact"},{"name":"endocytosis restricted to old cell end during vegetative growth","type":"exact"},{"name":"endocytosis restricted to old cell tip","type":"exact"}],"termid":"FYPO:0006340"}


id: PBO:0083829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Esterase that can function as an S-formylglutathione hydrolase; non-essential intracellular esterase; may be involved in the detoxification of formaldehyde, which can be metabolized to S-formylglutathione; similar to human esterase D","termid":"PBO:0083829"}


id: GO:0042781
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87700,105842],"is_not":false,"summary":null,"term":"GO:0042781"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing extra 3' nucleotides from tRNA precursor, generating 3' termini of tRNAs. A 3'-hydroxy group is left at the tRNA terminus and a 5'-phosphoryl group is left at the trailer molecule.","definition_xrefs":["PMID:21208191","PMID:12032089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0140101","GO:0140098","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"3'-tRNA processing endoribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.26.11-RXN","EC:3.1.26.11"],"synonyms":[{"name":"3 tRNase activity","type":"related"},{"name":"3' tRNA processing endoribonuclease activity","type":"exact"},{"name":"3' tRNase activity","type":"exact"},{"name":"RNase Z activity","type":"broad"},{"name":"ribonuclease Z activity","type":"broad"},{"name":"tRNA 3 endonuclease activity","type":"related"},{"name":"tRNA 3' endonuclease activity","type":"exact"},{"name":"tRNAse Z","type":"related"}],"termid":"GO:0042781","terms_by_termid":{"GO:0042781":null}}


id: PBO:0083484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene UIP4/YPL186C","termid":"PBO:0083484"}


id: GO:0030395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lactose, a disaccharide of glucose and galactose, the carbohydrate of milk.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lactose binding","termid":"GO:0030395"}


id: GO:0045998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid biosynthetic process","termid":"GO:0007554"},{"relation_name":"is_a","term_name":"positive regulation of ecdysteroid metabolic process","termid":"GO:0045966"},{"relation_name":"is_a","term_name":"positive regulation of steroid hormone biosynthetic process","termid":"GO:0090031"},{"relation_name":"positively_regulates","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ecdysteroid biosynthetic process","synonyms":[{"name":"activation of ecdysteroid biosynthetic process","type":"narrow"},{"name":"positive regulation of ecdysteroid anabolism","type":"exact"},{"name":"positive regulation of ecdysteroid biosynthesis","type":"exact"},{"name":"positive regulation of ecdysteroid formation","type":"exact"},{"name":"positive regulation of ecdysteroid synthesis","type":"exact"},{"name":"stimulation of ecdysteroid biosynthetic process","type":"narrow"},{"name":"up regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"up-regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"upregulation of ecdysteroid biosynthetic process","type":"exact"}],"termid":"GO:0045998"}


id: PBO:0076035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32C","termid":"PBO:0076035"}


id: GO:1901767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbapenem.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:9402024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"carbapenem metabolic process","synonyms":[{"name":"carbapenem metabolism","type":"exact"}],"termid":"GO:1901767"}


id: PBO:0068952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 196, pseudogene","termid":"PBO:0068952"}


id: PBO:0068867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 107, pseudogene","termid":"PBO:0068867"}


id: GO:2000965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellooligosaccharide metabolic process","termid":"GO:2000962"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide catabolic process","termid":"GO:2000963"},{"relation_name":"positively_regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"positive regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000965"}


id: PBO:0040200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 13","termid":"PBO:0040200"}


id: GO:0051714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the cytolysis by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis in another organism (obsolete GO:0051714)","synonyms":[{"name":"activation of cytolysis of cells of another organism","type":"narrow"},{"name":"positive regulation of cytolysis in other organism","type":"exact"},{"name":"positive regulation of cytolysis of cells of another organism","type":"exact"},{"name":"stimulation of cytolysis of cells of another organism","type":"narrow"},{"name":"up regulation of cytolysis of cells of another organism","type":"exact"},{"name":"up-regulation of cytolysis of cells of another organism","type":"exact"},{"name":"upregulation of cytolysis of cells of another organism","type":"exact"}],"termid":"GO:0051714"}


id: MOD:01160
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results in the loss of an ammonia, usually by a process of vicinal dehydration, rearrangement, and rehydration with release of ammonia, resulting in a loss of nitrogen with no gain of oxygen.","definition_xrefs":["Unimod:385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deaminated residue","synonyms":[{"name":"Ammonia-loss","type":"related"},{"name":"Loss of ammonia","type":"related"}],"termid":"MOD:01160"}


id: GO:0010430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid oxidation process in which the methyl group at the end of the fatty acid molecule (the omega carbon) is first oxidized to a hydroxyl group, then to an oxo group, and finally to a carboxyl group. The long chain dicarboxylates derived from omega-oxidation then enter the beta-oxidation pathway for further degradation.","definition_xrefs":["PMID:16404574","MetaCyc:PWY-2724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid omega-oxidation","termid":"GO:0010430"}


id: FYPO:0007711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33723569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal number of Ssb1 foci","synonyms":[{"name":"normal number of RPA foci","type":"exact"},{"name":"normal number of Rad11 foci","type":"exact"},{"name":"normal number of Rpa1 foci","type":"exact"},{"name":"normal number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"normal number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007711"}


id: GO:0070077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the removal of a methyl group from an arginine residue.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone arginine demethylation (obsolete GO:0070077)","termid":"GO:0070077"}


id: GO:1905267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any endonucleolytic RNA phosphodiester bond hydrolysis that is involved in tRNA processing.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:25401760"],"gene_count":0,"genotype_count":0,"name":"obsolete endonucleolytic cleavage involved in tRNA processing (obsolete GO:1905267)","synonyms":[{"name":"RNA phosphodiester bond hydrolysis, endonucleolytic involved in tRNA maturation","type":"exact"}],"termid":"GO:1905267"}


id: PBO:0061375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 35","termid":"PBO:0061375"}


id: MOD:01800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-serine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"},{"relation_name":"is_a","term_name":"methylated serine","termid":"MOD:01799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated serine","termid":"MOD:01800"}


id: GO:0035748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the myelin sheath furthest from the axon.","definition_xrefs":["GOC:BHF","PMID:20237282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"myelin sheath abaxonal region","termid":"GO:0035748"}


id: PBO:0040415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c","termid":"PBO:0040415"}


id: PBO:0048603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 4 homolog","termid":"PBO:0048603"}


id: PBO:0087147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent ATPase; involved in pre-rRNA processing at sites A0, A1, and A2, and in control of cell cycle progression; contains two upstream open reading frames (uORFs) in 5' untranslated region which regulate translation","termid":"PBO:0087147"}


id: PBO:0041695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator 1","termid":"PBO:0041695"}


id: GO:0090178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the establishment of planar polarity involved in neural tube closure, the coordinated organization of groups of cells in the plane of an epithelium that contributes to the closure of the neural tube.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of planar polarity","termid":"GO:0090175"},{"relation_name":"regulates","term_name":"establishment of planar polarity involved in neural tube closure","termid":"GO:0090177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of planar polarity involved in neural tube closure","termid":"GO:0090178"}


id: PBO:0087438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit f of the F0 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0087438"}


id: PBO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 40","termid":"PBO:0052525"}


id: MOD:01357
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-lysine residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated L-lysine.","definition_xrefs":["PubMed:12686488","Unimod:510#K","PubMed:16335955"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6-dimethyl-L-lysine","termid":"MOD:00084"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"2x(13)C,4x(2)H labeled dimethylated residue","termid":"MOD:00927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated L-lysine","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:01357"}


id: PBO:0053591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 618","termid":"PBO:0053591"}


id: PR:Q9P7W3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1703.07 gene.","definition_xrefs":["UniProtKB:Q9P7W3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.07","synonyms":[{"name":"ATP-citrate (pro-S-)-lyase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC1703.07","type":"exact"},{"name":"citrate cleavage enzyme subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7W3"}


id: GO:0097707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death characterized morphologically by the presence of smaller than normal mitochondria with condensed mitochondrial membrane densities, reduction or vanishing of mitochondria crista, and outer mitochondrial membrane rupture. Activation of mitochondrial voltage-dependent anion channels and mitogen-activated protein kinases, upregulation of endoplasmic reticulum stress, and inhibition of cystine/glutamate antiporter are involved in the induction of ferroptosis. This process is characterized by the accumulation of lipid peroxidation products and lethal reactive oxygen species (ROS) derived from iron metabolism. Glutathione peroxidase 4 (GPX4), heat shock protein beta-1, and nuclear factor erythroid 2-related factor 2 function as negative regulators of ferroptosis by limiting ROS production and reducing cellular iron uptake, respectively. In contrast, NADPH oxidase and p53 act as positive regulators of ferroptosis by promotion of ROS production and inhibition of expression of SLC7A11 (a specific light-chain subunit of the cystine/glutamate antiporter), respectively. Misregulated ferroptosis has been implicated in multiple physiological and pathological processes.","definition_xrefs":["GOC:mtg_apoptosis","PMID:26794443","PMID:25236395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ferroptosis","synonyms":[{"name":"iron-dependent programmed cell death","type":"related"}],"termid":"GO:0097707"}


id: GO:0036255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylamine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylamine","termid":"GO:0036255"}


id: PBO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFR antisense RNA 1","termid":"PBO:0060982"}


id: PBO:0029303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_morphology","termid":"PBO:0029303"}


id: PBO:0075201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 13","termid":"PBO:0075201"}


id: PBO:0049084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 139","termid":"PBO:0049084"}


id: PBO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide-1-phosphate transfer protein","termid":"PBO:0043841"}


id: GO:0006489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a diphosphorylated dolichol derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"dolichyl diphosphate metabolic process","termid":"GO:0046465"},{"relation_name":"part_of","term_name":"dolichol-linked oligosaccharide biosynthetic process","termid":"GO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0006486"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"dolichyl diphosphate biosynthetic process","synonyms":[{"name":"dolichyl diphosphate anabolism","type":"exact"},{"name":"dolichyl diphosphate biosynthesis","type":"exact"},{"name":"dolichyl diphosphate formation","type":"exact"},{"name":"dolichyl diphosphate synthesis","type":"exact"}],"termid":"GO:0006489"}


id: PBO:0077398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM132D antisense RNA 2","termid":"PBO:0077398"}


id: SOFP:comment
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Annotation comments, from a human curator","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comment","termid":"SOFP:comment"}


id: PBO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level","termid":"PBO:0031010"}


id: GO:0003338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephros are generated and organized.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephros morphogenesis","termid":"GO:0003338"}


id: GO:0102106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloylacetyl-CoA + feruloyl-CoA(4-) + H2O = curcumin + 2 coenzyme A(4-) + carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"curcumin synthase activity","secondary_identifiers":["MetaCyc:RXN-11226","RHEA:34823"],"termid":"GO:0102106"}


id: FYPO:0001197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular calcium level","synonyms":[{"name":"decreased calcium accumulation","type":"related"},{"name":"decreased cellular calcium ion level","type":"exact"},{"name":"decreased cellular calcium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level","type":"exact"}],"termid":"FYPO:0001197"}


id: PBO:0063437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 5A","termid":"PBO:0063437"}


id: GO:0061583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colon epithelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"is_a","term_name":"colon epithelial cell migration","termid":"GO:0061580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon epithelial cell chemotaxis","termid":"GO:0061583"}


id: PBO:0065100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR1B antisense RNA 1","termid":"PBO:0065100"}


id: PBO:0055251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2678","termid":"PBO:0055251"}


id: FYPO:0003572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:18761674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H3K9me at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0003572"}


id: PBO:0066238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 45","termid":"PBO:0066238"}


id: GO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heart contraction that contributes to the acute phase response. The acute phase response occurs during the early phases of an infection and is marked by changes in the production of plasma proteins such as C-reactive protein.","definition_xrefs":["PMID:15642986","PMID:15834430","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"part_of","term_name":"acute-phase response","termid":"GO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart contraction involved in acute-phase response","synonyms":[{"name":"regulation of cardiac contraction during acute phase response","type":"related"},{"name":"regulation of heart contraction during acute phase response","type":"related"}],"termid":"GO:0002531"}


id: GO:0035136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forelimb morphogenesis","secondary_identifiers":["GO:0035140"],"synonyms":[{"name":"arm morphogenesis","type":"narrow"}],"termid":"GO:0035136"}


id: GO:0048688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sprouting of an injured axon.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of axon regeneration","termid":"GO:0048681"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"negatively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sprouting of injured axon","synonyms":[{"name":"down regulation of sprouting of injured axon","type":"exact"},{"name":"down-regulation of sprouting of injured axon","type":"exact"},{"name":"downregulation of sprouting of injured axon","type":"exact"},{"name":"inhibition of sprouting of injured axon","type":"narrow"}],"termid":"GO:0048688"}


id: PBO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein iron-sulfur cluster assembly protein Nfu1 (predicted)","termid":"PBO:0016999"}


id: PBO:0088736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Tma20","termid":"PBO:0088736"}


id: PBO:0057714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1301","termid":"PBO:0057714"}


id: GO:0008384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein.","definition_xrefs":["EC:2.7.11.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0004672","GO:0016301","GO:0003824","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"IkappaB kinase activity","secondary_identifiers":["Reactome:R-HSA-5684275","MetaCyc:2.7.11.10-RXN","RHEA:19073","Reactome:R-HSA-5684267"],"synonyms":[{"name":"ATP:IkappaB protein phosphotransferase activity","type":"related"},{"name":"CHUK","type":"related"},{"name":"IKBKA","type":"related"},{"name":"IKBKB","type":"related"},{"name":"IKK","type":"related"},{"name":"IKK-1","type":"related"},{"name":"IKK-2","type":"related"},{"name":"STK12","type":"related"},{"name":"TANK-binding kinase 1 activity","type":"narrow"},{"name":"TBK1","type":"related"},{"name":"inhibitor of NF-kappaB kinase activity","type":"related"},{"name":"inhibitor of NFkappaB kinase activity","type":"related"}],"termid":"GO:0008384"}


id: FYPO:0000411
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle progression is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"mitotic cell cycle progression: normal","type":"related"},{"name":"normal cell cycle during mitotic cell cycle","type":"related"},{"name":"normal cell cycle during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle progression","type":"exact"},{"name":"normal mitotic cell-division cycle","type":"exact"}],"termid":"FYPO:0000411","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: PBO:0028166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine_during_cellular_response_to_hydroxyurea","termid":"PBO:0028166"}


id: PBO:0043852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular retinoic acid binding protein 1","termid":"PBO:0043852"}


id: PBO:0111740
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"White-Collar for Neurospora homologS","termid":"PBO:0111740"}


id: PBO:0087861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of genes involved in glycolysis; DNA-binding protein that interacts and functions with the transcriptional activator Gcr2p; contains a long intron, which allows multiple RNA and protein isoforms with varying expression levels depending on glucose availability","termid":"PBO:0087861"}


id: MOD:01930
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to D-aspartic acid.","definition_xrefs":["ChEBI:48094","RESID:AA0190#ASN","PubMed:9384562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"D-aspartic acid","termid":"MOD:01942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid (Asn)","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01930"}


id: PBO:0064792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1K divergent transcript","termid":"PBO:0064792"}


id: GO:0019656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the enzymatic breakdown of D-glucose to D-lactate and ethanol, yielding energy in the form of adenosine triphosphate (ATP) at the rate of one ATP per glucose molecule.","definition_xrefs":["GOC:jl","MetaCyc:P122-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glucose catabolic process to D-lactate and ethanol","synonyms":[{"name":"glucose fermentation to D-lactate and ethanol","type":"exact"},{"name":"heterofermentation","type":"exact"},{"name":"heterofermentative lactate fermentation","type":"exact"},{"name":"heterofermentative pathway","type":"exact"},{"name":"heterolactate fermentation","type":"exact"},{"name":"heterolactic fermentation","type":"exact"}],"termid":"GO:0019656"}


id: PBO:0049938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 2","termid":"PBO:0049938"}


id: GO:0008376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-8855954","Reactome:R-HSA-8931648","Reactome:R-HSA-9605700"],"synonyms":[{"name":"GalNAc transferase activity","type":"exact"}],"termid":"GO:0008376"}


id: MOD:01320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:176#K","PubMed:16078144","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to lysine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01320"}


id: PBO:0040516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axonemal dynein light chain domain containing 1","termid":"PBO:0040516"}


id: PBO:0079663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 11","termid":"PBO:0079663"}


id: PBO:0081915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 884, pseudogene","termid":"PBO:0081915"}


id: GO:1902034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell proliferation","termid":"GO:1902033"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"hematopoietic stem cell proliferation","termid":"GO:0071425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic stem cell proliferation","synonyms":[{"name":"down regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"inhibition of hematopoietic stem cell proliferation","type":"narrow"},{"name":"inhibition of hemopoietic stem cell proliferation","type":"narrow"},{"name":"negative regulation of hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:1902034"}


id: PBO:0076880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 29","termid":"PBO:0076880"}


id: GO:0075205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The cAMP-mediated signal transduction is defined as a series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075205)","synonyms":[{"name":"modulation by host of symbiont cAMP-mediated signaling","type":"related"},{"name":"modulation by host of symbiont cAMP-mediated signalling","type":"exact"},{"name":"regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075205"}


id: GO:0033857
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111119],"is_not":false,"summary":null,"term":"GO:0033857"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 5-diphosphate pentakisphosphate = ADP + 1D-myo-inositol bisdiphosphate tetrakisphosphate.","definition_xrefs":["EC:2.7.4.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"diphosphoinositol-pentakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0102092","MetaCyc:2.7.4.24-RXN"],"synonyms":[{"name":"5-diphosphoinositol pentakisphosphate 3-kinase activity","type":"exact"},{"name":"PP-IP5 kinase activity","type":"related"},{"name":"PP-InsP5 kinase activity","type":"related"},{"name":"PPIP5K","type":"related"}],"termid":"GO:0033857","terms_by_termid":{"GO:0033857":null}}


id: PBO:0088665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA type, iron-sensing Fep1","termid":"PBO:0088665"}


id: GO:2000013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginine biosynthetic process via ornithine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ornithine metabolic process","termid":"GO:0090368"},{"relation_name":"is_a","term_name":"regulation of arginine biosynthetic process","termid":"GO:1900079"},{"relation_name":"regulates","term_name":"arginine biosynthetic process via ornithine","termid":"GO:0042450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of arginine biosynthetic process via ornithine","synonyms":[{"name":"regulation of arginine anabolism via ornithine","type":"exact"},{"name":"regulation of arginine formation via ornithine","type":"exact"},{"name":"regulation of arginine synthesis via ornithine","type":"exact"}],"termid":"GO:2000013"}


id: FYPO:0007055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which  endosome organization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0007032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal endosome organization","synonyms":[{"name":"during vegetative growth during mitotic cell cycle","type":"related"},{"name":"normal endosome organisation","type":"exact"},{"name":"normal endosome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007055"}


id: PBO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.42","termid":"PBO:0001946"}


id: PR:O94715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.03","synonyms":[{"name":"Spom972h-rps1501","type":"exact"}],"termid":"PR:O94715"}


id: GO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selected cleavage of the Leu6-Lys7 bond in the pheromone alpha-mating factor.","definition_xrefs":["EC:3.4.23.35"],"gene_count":0,"genotype_count":0,"name":"obsolete barrierpepsin activity (obsolete GO:0004191)","synonyms":[{"name":"Bar proteinase activity","type":"narrow"},{"name":"barrier proteinase activity","type":"related"},{"name":"barrierpepsin activity","type":"exact"},{"name":"extracellular 'barrier' protein activity","type":"related"}],"termid":"GO:0004191"}


id: PBO:0028598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrostatic_pressure","termid":"PBO:0028598"}


id: PBO:0066672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras like without CAAX 1","termid":"PBO:0066672"}


id: PBO:0066036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 5","termid":"PBO:0066036"}


id: GO:0042914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.","definition_xrefs":["GOC:jl","PMID:17347522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriocin transport","termid":"GO:0043213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"colicin transport","termid":"GO:0042914"}


id: PBO:0018070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly protien Sdh8 (predicted)","termid":"PBO:0018070"}


id: PBO:0044164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin 2, pseudogene","termid":"PBO:0044164"}


id: PBO:0089385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic leucine-tRNA ligase Lrs1","termid":"PBO:0089385"}


id: PBO:0079693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 1","termid":"PBO:0079693"}


id: PBO:0050956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma receptor 2","termid":"PBO:0050956"}


id: GO:0071462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"},{"relation_name":"is_a","term_name":"cellular response to acid chemical","termid":"GO:0071229"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to water stimulus","termid":"GO:0071462"}


id: FYPO:0005894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"normal protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"normal protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during G1 phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005894"}


id: PBO:0084261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein, regulates phospholipid metabolism; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane (PM) and regulate PI4P levels by controlling access of Sac1p phosphatase to substrate PI4P in the PM; interacts with FFAT motifs in Opi1p, Swh1p, Osh2p, and Osh3p; involved in telomeric silencing; VAP homolog; SCS2 has a paralog, SCS22, that arose from the whole genome duplication","termid":"PBO:0084261"}


id: PBO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 5","termid":"PBO:0050678"}


id: GO:0019504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline.","definition_xrefs":["PMID:24520058","PMID:10689197","PMID:1804402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"L-proline betaine metabolic process","termid":"GO:0019502"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-proline betaine catabolic process","secondary_identifiers":["MetaCyc:P561-PWY"],"synonyms":[{"name":"stachydrine breakdown","type":"exact"},{"name":"stachydrine catabolic process","type":"exact"},{"name":"stachydrine catabolism","type":"exact"},{"name":"stachydrine degradation","type":"exact"}],"termid":"GO:0019504"}


id: GO:0048511
data:
  {"annotated_genes":["SJAG_02296","SJAG_02724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007623"},{"annotations":[102516],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0009649"}]},"cv_name":"biological_process","definition":"Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02296":null,"SJAG_02724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhythmic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rhythm","type":"related"}],"termid":"GO:0048511","terms_by_termid":{"GO:0007623":null,"GO:0009649":null}}


id: GO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a naive B cell acquires the specialized features of a mature or memory B cell during an immune response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell activation involved in immune response","termid":"GO:0002312"},{"relation_name":"is_a","term_name":"mature B cell differentiation","termid":"GO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell differentiation involved in immune response","synonyms":[{"name":"mature B cell development involved in immune response","type":"related"},{"name":"mature B cell differentiation during immune response","type":"related"},{"name":"mature B lymphocyte differentiation during immune response","type":"related"},{"name":"mature B-cell differentiation during immune response","type":"related"},{"name":"mature B-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002313"}


id: PBO:0089885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Naa15","termid":"PBO:0089885"}


id: PBO:0017727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase/ ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0017727"}


id: PBO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein B1","termid":"PBO:0052543"}


id: GO:0120266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"},{"relation_name":"positively_regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome attachment to the nuclear envelope","synonyms":[{"name":"activation of chromosome attachment to the nuclear envelope","type":"narrow"},{"name":"stimulation of chromosome attachment to the nuclear envelope","type":"narrow"},{"name":"up regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"up-regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"upregulation of chromosome attachment to the nuclear envelope","type":"exact"}],"termid":"GO:0120266"}


id: GO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a glial cell-derived neurotrophic factor receptor.","definition_xrefs":["GOC:yaf","PMID:12953054","PMID:29245123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"GDNF receptor signaling pathway","type":"exact"},{"name":"glial cell derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0035860"}


id: GO:0034531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-hydroxymethylbenzalpyruvate + H2O = pyruvate + 4-hydroxymethylsalicylaldehyde.","definition_xrefs":["PMID:8042906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-hydroxy-4-hydroxymethylbenzalpyruvate hydratase-aldolase activity","secondary_identifiers":["UM-BBD_reactionID:r0766"],"termid":"GO:0034531"}


id: FYPO:0004371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the S-phase DNA damage checkpoint is lower than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of S-phase DNA damage checkpoint","synonyms":[{"name":"decreased duration of S-phase DNA damage checkpoint activation","type":"exact"},{"name":"decreased duration of S-phase DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased duration of S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"decreased duration of intra-S DNA damage checkpoint","type":"exact"},{"name":"decreased duration of mitotic S-phase DNA damage checkpoint","type":"exact"},{"name":"premature S-phase DNA damage checkpoint deactivation","type":"related"},{"name":"reduced duration of S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004371"}


id: GO:0015053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Hydrophobic glycoprotein to which 11-cis-retinal binds as a Schiff base (in rhodopsin) or 3,4-didehydro-11-cis-retinal binds as a Schiff base in cyanopsin and porphyropsin.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete opsin (obsolete GO:0015053)","synonyms":[{"name":"opsin","type":"exact"}],"termid":"GO:0015053"}


id: GO:0006691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene metabolic process","synonyms":[{"name":"leukotriene metabolism","type":"exact"}],"termid":"GO:0006691"}


id: PR:Q9P7I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmk1 gene.","definition_xrefs":["UniProtKB:Q9P7I2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase type I (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK12.02c","synonyms":[{"name":"CaMK-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cmk1","type":"exact"}],"termid":"PR:Q9P7I2"}


id: GO:1903782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF","GOC:nc","PMID:19376779","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"},{"relation_name":"regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"}


id: PBO:0061917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 5","termid":"PBO:0061917"}


id: GO:0070391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoteichoic acid stimulus; lipoteichoic acid is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:add","PMID:14665680","PMID:16020688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipoteichoic acid","synonyms":[{"name":"response to LTA","type":"exact"}],"termid":"GO:0070391"}


id: SO:0001390
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified cysteine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_cysteine","secondary_identifiers":["MOD:00905"],"synonyms":[{"name":"ModCys","type":"exact"},{"name":"modified L cysteine","type":"exact"},{"name":"modified L-cysteine","type":"exact"}],"termid":"SO:0001390"}


id: PBO:0075663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 4","termid":"PBO:0075663"}


id: FYPO:0009002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitochondrion distribution phenotype observed during mitotic interphase in which the length fraction of cytoplasmic microtubules that is bound to mitochondria is increased with respect to the wild type.","definition_xrefs":["PomBase:mlr","PMID:36633091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased mitochondrial-associated microtubule fraction during mitotic interphase","synonyms":[{"name":"increased microtubule-associated mitochondrial fraction during mitotic interphase","type":"related"}],"termid":"FYPO:0009002"}


id: PBO:0070944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18","termid":"PBO:0070944"}


id: PBO:0060694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 2","termid":"PBO:0060694"}


id: GO:0000139
data:
  {"annotated_genes":["SJAG_04401","SJAG_03790","SJAG_01206","SJAG_04592","SJAG_00328","SJAG_04714","SJAG_01112","SJAG_04391","SJAG_01133","SJAG_03499","SJAG_05286","SJAG_03555","SJAG_01960","SJAG_03015","SJAG_05209","SJAG_04095","SJAG_04770","SJAG_05013","SJAG_00553","SJAG_00261","SJAG_02519","SJAG_02910","SJAG_00598","SJAG_03670","SJAG_03158","SJAG_03082","SJAG_04162","SJAG_02371","SJAG_00506","SJAG_01516","SJAG_03889","SJAG_01642","SJAG_06588","SJAG_00525","SJAG_00434","SJAG_00143","SJAG_00880","SJAG_01972","SJAG_00804","SJAG_04406","SJAG_02996","SJAG_03850","SJAG_04023","SJAG_04906","SJAG_02839","SJAG_05736","SJAG_00276","SJAG_01276","SJAG_02902","SJAG_04340","SJAG_01021","SJAG_01409","SJAG_01633","SJAG_04668","SJAG_04739","SJAG_04697","SJAG_04018","SJAG_02316","SJAG_04398","SJAG_03528","SJAG_01508","SJAG_02399","SJAG_03268","SJAG_03933","SJAG_03368","SJAG_04402","SJAG_00183","SJAG_01991","SJAG_00669","SJAG_02640","SJAG_01177","SJAG_00785","SJAG_03552","SJAG_01264","SJAG_00557","SJAG_04474","SJAG_02706","SJAG_00171","SJAG_04112","SJAG_00339","SJAG_00816","SJAG_03302","SJAG_03871","SJAG_01027"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58160,58912,59292,61087,65869,66195,66533,83849,83928,84470,84481,84649,85968,86719,87058,87208,87960,88505,88715,88754,88758,88759,88760,88761,88791,88952,90024,90804,91228,91577,91627,91981,92102,92600,93212,93817,94282,94484,94485,94486,94487,94501,94502,94503,94504,94668,95207,95257,95935,96532,98515,100156,100356,100443,100660,100820,100905,101635,101833,101859,102882,103198,103254,103759,103923,103938,104340,104583,104900,104943,105592,105738,105786,106697,106884,108239,108358,108676,110386,111629,111678,112985,113064,113710,113831,114134,114293,114464,114528],"is_not":false,"summary":null,"term":"GO:0000139"},{"annotations":[108694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[93603,114135,82957,100788],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":84,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00171":null,"SJAG_00183":null,"SJAG_00261":null,"SJAG_00276":null,"SJAG_00328":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00506":null,"SJAG_00525":null,"SJAG_00553":null,"SJAG_00557":null,"SJAG_00598":null,"SJAG_00669":null,"SJAG_00785":null,"SJAG_00804":null,"SJAG_00816":null,"SJAG_00880":null,"SJAG_01021":null,"SJAG_01027":null,"SJAG_01112":null,"SJAG_01133":null,"SJAG_01177":null,"SJAG_01206":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01409":null,"SJAG_01508":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01960":null,"SJAG_01972":null,"SJAG_01991":null,"SJAG_02316":null,"SJAG_02371":null,"SJAG_02399":null,"SJAG_02519":null,"SJAG_02640":null,"SJAG_02706":null,"SJAG_02839":null,"SJAG_02902":null,"SJAG_02910":null,"SJAG_02996":null,"SJAG_03015":null,"SJAG_03082":null,"SJAG_03158":null,"SJAG_03268":null,"SJAG_03302":null,"SJAG_03368":null,"SJAG_03499":null,"SJAG_03528":null,"SJAG_03552":null,"SJAG_03555":null,"SJAG_03670":null,"SJAG_03790":null,"SJAG_03850":null,"SJAG_03871":null,"SJAG_03889":null,"SJAG_03933":null,"SJAG_04018":null,"SJAG_04023":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04162":null,"SJAG_04340":null,"SJAG_04391":null,"SJAG_04398":null,"SJAG_04401":null,"SJAG_04402":null,"SJAG_04406":null,"SJAG_04474":null,"SJAG_04592":null,"SJAG_04668":null,"SJAG_04697":null,"SJAG_04714":null,"SJAG_04739":null,"SJAG_04770":null,"SJAG_04906":null,"SJAG_05013":null,"SJAG_05209":null,"SJAG_05286":null,"SJAG_05736":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"Golgi apparatus membrane","type":"exact"}],"termid":"GO:0000139","terms_by_termid":{"GO:0000136":null,"GO:0000139":null,"GO:0140497":null}}


id: PBO:0012844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ski complex interacting GTPase Ski7","termid":"PBO:0012844"}


id: GO:0051125
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051125","terms_by_termid":{"GO:0034316":null}}


id: PR:O42957
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ulp1 gene.","definition_xrefs":["UniProtKB:O42957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like-specific protease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.09","synonyms":[{"name":"Spom972h-ulp1","type":"exact"}],"termid":"PR:O42957"}


id: GO:0051573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 methylation (obsolete GO:0051573)","synonyms":[{"name":"down regulation of histone H3-K9 methylation","type":"exact"},{"name":"down-regulation of histone H3-K9 methylation","type":"exact"},{"name":"downregulation of histone H3-K9 methylation","type":"exact"},{"name":"inhibition of histone H3-K9 methylation","type":"narrow"}],"termid":"GO:0051573"}


id: PATO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000211 muscle function (obsolete PATO:0000211)","termid":"PATO:0000211"}


id: GO:0006814
data:
  {"annotated_genes":["SJAG_04028","SJAG_04167","SJAG_04616","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108330],"is_not":false,"summary":null,"term":"GO:0006814"},{"annotations":[92438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[84821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098719"},{"annotations":[67064,61053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"}]},"cv_name":"biological_process","definition":"The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sodium ion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006834","GO:0016974"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium channel auxiliary protein activity","type":"related"},{"name":"sodium transport","type":"exact"},{"name":"sodium/potassium transport","type":"broad"},{"name":"sodium:calcium exchange","type":"narrow"},{"name":"sodium:solute transport","type":"narrow"}],"termid":"GO:0006814","terms_by_termid":{"GO:0006814":null,"GO:0035725":null,"GO:0036376":null,"GO:0098719":null}}


id: PBO:0083464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MET4/YNL104C","termid":"PBO:0083464"}


id: PBO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 2","termid":"PBO:0048303"}


id: PR:Q10413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F3.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.08c","synonyms":[{"name":"Spom972h-SPAC1F3.08c","type":"exact"}],"termid":"PR:Q10413"}


id: GO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of prostaglandin-endoperoxide synthase activity","termid":"GO:0060584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"positive regulation of (PG)H synthase activity","type":"related"},{"name":"positive regulation of PG synthetase activity","type":"related"},{"name":"positive regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"positive regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060585"}


id: PBO:0058781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7150","termid":"PBO:0058781"}


id: PBO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S isoprenylcysteine O-methyltransferase Mam4","termid":"PBO:0000852"}


id: PBO:0044104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A12","termid":"PBO:0044104"}


id: MOD:00226
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 1'-(8alpha-FAD)-L-histidine.","definition_xrefs":["PubMed:1396672","DeltaMass:0","PubMed:10585424","PubMed:9261083","PubMed:4339951","RESID:AA0221","Unimod:50#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(8alpha-FAD)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(1-[8alpha riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-(8alpha-FAD)-L-histidine","type":"exact"},{"name":"8alpha-(N(epsilon)-histidyl)FAD","type":"exact"},{"name":"8alpha-(N1'-histidyl)FAD","type":"exact"},{"name":"8alpha-N3-histidyl FAD","type":"related"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES Tele-8alpha-FAD histidine","type":"exact"},{"name":"N theta and N pi-(8alpha-Flavin) (on Histidine)","type":"exact"},{"name":"N(tau)-(8alpha-FAD)-histidine","type":"exact"},{"name":"Nt8aFADHis","type":"exact"},{"name":"tele-(8alpha-FAD)-histidine","type":"exact"}],"termid":"MOD:00226"}


id: GO:0046336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanolamine metabolic process","termid":"GO:0006580"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanolamine catabolic process","synonyms":[{"name":"ethanolamine breakdown","type":"exact"},{"name":"ethanolamine catabolism","type":"exact"},{"name":"ethanolamine degradation","type":"exact"}],"termid":"GO:0046336"}


id: PBO:0018000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease non-catalytic subunit Swi10","termid":"PBO:0018000"}


id: PBO:0017953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase Pus7 (predicted)","termid":"PBO:0017953"}


id: PBO:0067357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 455, pseudogene","termid":"PBO:0067357"}


id: GO:0070737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glycine residues to a glycine residue covalently attached to the gamma-carboxyl group of a glutamate residue on a target protein, resulting in the elongation of a polyglycine side chain.","definition_xrefs":["PMID:19524510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glycine ligase activity","termid":"GO:0070735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"protein-glycine ligase activity, elongating","synonyms":[{"name":"protein glycylase activity, elongating","type":"exact"}],"termid":"GO:0070737"}


id: GO:0003885
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97253],"is_not":false,"summary":null,"term":"GO:0003885"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinono-1,4-lactone + O2 = dehydro-D-arabinono-1,4-lactone + H2O2 + H+.","definition_xrefs":["EC:1.1.3.37","RHEA:23756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.1.3.37-RXN","KEGG_REACTION:R02715"],"synonyms":[{"name":"D-arabinono-1,4-lactone:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0003885","terms_by_termid":{"GO:0003885":null}}


id: PBO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 1","termid":"PBO:0048801"}


id: PBO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1 domain","termid":"PBO:0001518"}


id: PBO:0074182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 4","termid":"PBO:0074182"}


id: PBO:0077053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF and HNRNPL related immunoregulatory long non-coding RNA","termid":"PBO:0077053"}


id: GO:0051786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-13,14-dihydroretinol + A = all-trans-retinol + AH(2). Note that this reaction has only been observed to occur in the opposite direction.","definition_xrefs":["EC:1.3.99.23","RHEA:19193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"all-trans-retinol 13,14-reductase activity","secondary_identifiers":["MetaCyc:1.3.99.23-RXN","Reactome:R-HSA-8956427","KEGG_REACTION:R07163"],"synonyms":[{"name":"(13,14)-all-trans-retinol saturase activity","type":"exact"},{"name":"RetSat activity","type":"related"},{"name":"all-trans-13,14-dihydroretinol:acceptor 13,14-oxidoreductase activity","type":"exact"},{"name":"all-trans-retinol:all-trans-13,14-dihydroretinol saturase activity","type":"exact"},{"name":"retinol saturase activity","type":"related"}],"termid":"GO:0051786"}


id: PBO:0054655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2060","termid":"PBO:0054655"}


id: PBO:0011961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown","termid":"PBO:0011961"}


id: PBO:0038564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABITRAM pseudogene 1","termid":"PBO:0038564"}


id: PATO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having changed from one fully differentiated state into another.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaplastic","synonyms":[{"name":"trans-differentiated","type":"related"}],"termid":"PATO:0002101"}


id: GO:0031901
data:
  {"annotated_genes":["SJAG_03405","SJAG_01112","SJAG_00314"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91573,108447,108858],"is_not":false,"summary":null,"term":"GO:0031901"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00314":null,"SJAG_01112":null,"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"early endosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031901","terms_by_termid":{"GO:0031901":null}}


id: GO:1902129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-lariciresinol.","definition_xrefs":["GOC:TermGenie","PMID:9872995","PMID:15949826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"(-)-lariciresinol metabolic process","termid":"GO:1902127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(-)-lariciresinol biosynthetic process","synonyms":[{"name":"(-)-lariciresinol anabolism","type":"exact"},{"name":"(-)-lariciresinol biosynthesis","type":"exact"},{"name":"(-)-lariciresinol formation","type":"exact"},{"name":"(-)-lariciresinol synthesis","type":"exact"}],"termid":"GO:1902129"}


id: GO:0072099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the ureteric bud along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in ureteric bud development","synonyms":[{"name":"ureteric bud anterior/posterior pattern formation","type":"related"}],"termid":"GO:0072099"}


id: FYPO:0006329
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[115646,115649,115647,115645],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which organelle localization, i.e. any process in which an organelle is transported to, and/or maintained in, a specific location, is abnormal.","definition_xrefs":["GO:0051640","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal organelle localization","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01834","SJAG_03449","SJAG_03892"],"single_locus_genotype_uniquenames":["man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","vps4delta","pom152delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal organelle localisation","type":"exact"},{"name":"abnormal organelle localization during mitotic cell cycle","type":"related"},{"name":"abnormal organelle localization during vegetative growth","type":"exact"}],"termid":"FYPO:0006329","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0079537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase 1","termid":"PBO:0079537"}


id: PBO:0049262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin A","termid":"PBO:0049262"}


id: PR:Q9US54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf11 gene.","definition_xrefs":["UniProtKB:Q9US54","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.04c","synonyms":[{"name":"Spom972h-taf11","type":"exact"},{"name":"TBP-associated factor 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US54"}


id: GO:1904333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kmv","PMID:22761594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of error-prone translesion synthesis","synonyms":[{"name":"activation of error-prone postreplication DNA repair","type":"related"},{"name":"activation of error-prone translesion synthesis","type":"narrow"},{"name":"activation of mutagenic PRR","type":"narrow"},{"name":"activation of mutagenic postreplication DNA repair","type":"related"},{"name":"positive regulation of error-prone postreplication DNA repair","type":"related"},{"name":"positive regulation of mutagenic PRR","type":"exact"},{"name":"positive regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone translesion synthesis","type":"exact"},{"name":"up regulation of mutagenic PRR","type":"exact"},{"name":"up regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone translesion synthesis","type":"exact"},{"name":"up-regulation of mutagenic PRR","type":"exact"},{"name":"up-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone translesion synthesis","type":"exact"},{"name":"upregulation of mutagenic PRR","type":"exact"},{"name":"upregulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904333"}


id: GO:0035495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of SNARE complex disassembly","termid":"GO:0035495"}


id: PBO:0003602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, ribosomal subunit L35 (predicted)","termid":"PBO:0003602"}


id: GO:0000388
data:
  {"annotated_genes":["SJAG_02295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96399],"is_not":false,"summary":null,"term":"GO:0000388"}]},"cv_name":"biological_process","definition":"Rearrangement of the pre-catalytic spliceosome containing U4 (or U4atac) and U1 (or U11) snRNPs to unpair U4 (or U4atac) from U6 (or U6atac) and release it from the spliceosomal complex along with U1 (or U11).","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal conformational changes to generate catalytic conformation","termid":"GO:0000393"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000396","GO:0000397"],"synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"U12-type spliceosome conformational change to release U4atac and U11","type":"narrow"},{"name":"U2-type spliceosome conformational change to release U4 and U1","type":"narrow"},{"name":"spliceosomal A1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A1 complex formation","type":"narrow"},{"name":"spliceosomal B2 complex biosynthesis","type":"narrow"},{"name":"spliceosomal B2 complex formation","type":"narrow"}],"termid":"GO:0000388","terms_by_termid":{"GO:0000388":null}}


id: PBO:0073996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3 pseudogene 3","termid":"PBO:0073996"}


id: PBO:0059335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S7","termid":"PBO:0059335"}


id: GO:0035201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between anterior and posterior compartments of the leg disc that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior lineage restriction, imaginal disc","termid":"GO:0048099"},{"relation_name":"part_of","term_name":"leg disc anterior/posterior pattern formation","termid":"GO:0035200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc anterior/posterior lineage restriction","termid":"GO:0035201"}


id: GO:0141086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"negatively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"negative regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141086"}


id: GO:0035864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a potassium ion stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to potassium ion","synonyms":[{"name":"response to K+ ion","type":"exact"},{"name":"response to potassium","type":"exact"}],"termid":"GO:0035864"}


id: PBO:0031570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index","termid":"PBO:0031570"}


id: PBO:0085514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15 and bacterial S19","termid":"PBO:0085514"}


id: GO:0052709
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","termid":"GO:0052708"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine anabolism","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine formation","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine synthesis","type":"exact"},{"name":"hercynine anabolism","type":"exact"},{"name":"hercynine biosynthesis","type":"exact"},{"name":"hercynine biosynthetic process","type":"exact"},{"name":"hercynine formation","type":"exact"},{"name":"hercynine synthesis","type":"exact"},{"name":"histidine betaine anabolism","type":"exact"},{"name":"histidine betaine biosynthesis","type":"exact"},{"name":"histidine betaine biosynthetic process","type":"exact"},{"name":"histidine betaine formation","type":"exact"},{"name":"histidine betaine synthesis","type":"exact"}],"termid":"GO:0052709","terms_by_termid":{"GO:0052707":null}}


id: PBO:0028826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-twin_haploid_meiosis","termid":"PBO:0028826"}


id: PBO:0036318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7b involved in cytoplasmic translation","termid":"PBO:0036318"}


id: GO:0102549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + H2O = sn-1-lyso-2-16:0-monogalactosyldiacylglycerol + oleate + H+.","definition_xrefs":["GOC:pz","EC:3.1.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"1-18:1-2-16:0-monogalactosyldiacylglycerol lipase activity","secondary_identifiers":["MetaCyc:RXN-14912"],"termid":"GO:0102549"}


id: PBO:0072202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 1","termid":"PBO:0072202"}


id: PBO:0028496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_via_N-end_rule_pathway_during_vegetative_growth","termid":"PBO:0028496"}


id: GO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen transcytosis carried out by M cells in the mucosal-associated lymphoid tissue (MALT). Transcytosis is the process of the directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side. M cells are specialized epithelia cells with a microfold structure that are adept at moving antigens from the gut lumen to antigen presenting cells in the MALT.","definition_xrefs":["PMID:12843411","ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"},{"relation_name":"part_of","term_name":"antigen sampling by M cells in mucosal-associated lymphoid tissue","termid":"GO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"antigen transcytosis by M cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen transcytosis by M cells in MALT","type":"exact"},{"name":"antigen transport by M cells in MALT","type":"exact"},{"name":"antigen transport by M cells in mucosal-associated lymphoid tissue","type":"exact"}],"termid":"GO:0002412"}


id: GO:0061990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octanoyl-CoA + a malonyl-[acyl-carrier protein] = a 3-oxodecanoyl-[acyl-carrier protein] + CoA + CO2.","definition_xrefs":["PMID:22753057","EC:2.3.1.207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoyltransferase activity","termid":"GO:0016415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"beta-ketodecanoyl-[acyl-carrier-protein] synthase activity","secondary_identifiers":["MetaCyc:RXN-13613","RHEA:42264"],"termid":"GO:0061990"}


id: PBO:0041975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC15 divergent transcript","termid":"PBO:0041975"}


id: PBO:0072984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex antagonist associated with prostate cancer 1","termid":"PBO:0072984"}


id: GO:0097412
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A glass-like, pale intracellular inclusion.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyaline inclusion","synonyms":[{"name":"pale body","type":"related"}],"termid":"GO:0097412"}


id: PBO:0062629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 6","termid":"PBO:0062629"}


id: PBO:0065805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB2A, member RAS oncogene family","termid":"PBO:0065805"}


id: PATO:0001473
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being present in two copies.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased amount","termid":"PATO:0000470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated","synonyms":[{"name":"doubled","type":"exact"}],"termid":"PATO:0001473"}


id: GO:0043423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 3-phosphoinositide-dependent protein kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"3-phosphoinositide-dependent protein kinase binding","synonyms":[{"name":"phosphatidylinositol-3-phosphate-dependent protein kinase binding","type":"exact"}],"termid":"GO:0043423"}


id: PBO:0036273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion protein for conjugation Mam3","termid":"PBO:0036273"}


id: PBO:0088662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease, yapsin family, unknown specificity Yps1","termid":"PBO:0088662"}


id: MOD:00881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 465 megerd with 199. Remap to MOD:00552 DiMethyl-CH2D.","definition_xrefs":["PubMed:9252331","Unimod:465"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00881 N-reductive amination-D (obsolete MOD:00881)","termid":"MOD:00881"}


id: GO:0048846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The long distance growth of a single cell process, that is involved in the migration of an axon growth cone, where the migration is directed to a specific target site by a combination of attractive and repulsive cues.","definition_xrefs":["GOC:jid","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon extension","termid":"GO:0048675"},{"relation_name":"is_a","term_name":"neuron projection extension involved in neuron projection guidance","termid":"GO:1902284"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon extension involved in axon guidance","termid":"GO:0048846"}


id: PATO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mass which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mass","termid":"PATO:0000125"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mass","secondary_identifiers":["PATO:0000578"],"synonyms":[{"name":"high mass","type":"exact"},{"name":"large mass","type":"exact"}],"termid":"PATO:0001563"}


id: PBO:0064280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M1 pseudogene 1","termid":"PBO:0064280"}


id: MOD:01733
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01733"}


id: PBO:0088631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44","termid":"PBO:0088631"}


id: FYPO:0005149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid and has one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"septated spheroid vegetative cell","synonyms":[{"name":"septated rounded vegetative cell","type":"exact"}],"termid":"FYPO:0005149"}


id: PBO:0083941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl cyclotransferase; cleaves the gamma-glutamyl bond of glutathione to yield 5-oxoproline and a Cys-Gly dipeptide; similar to mammalian pro-apoptotic protein ChaC1; expression of mouse ChaC1 in yeast increases apoptosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; periodically expressed during the metabolic cycle","termid":"PBO:0083941"}


id: GO:0102219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n ATP + n H2O + a 6-phosphogluco-amylopectin = n AMP + n hydrogenphosphate + a 6-phosphogluco-3-phosphogluco-amylopectin.","definition_xrefs":["EC:2.7.9.5","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoglucan, water dikinase activity","termid":"GO:0051752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"phosphogluco-amylopectin water dikinase activity","secondary_identifiers":["MetaCyc:RXN-12204"],"termid":"GO:0102219"}


id: FYPO:0001611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular histidine level","termid":"FYPO:0001562"},{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased vacuolar histidine level","synonyms":[{"name":"decreased level of histidine in vacuole","type":"exact"},{"name":"decreased vacuolar L-histidine level","type":"exact"},{"name":"decreased vacuolar histidine level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar histidine level during vegetative growth","type":"exact"},{"name":"reduced level of histidine in vacuole","type":"exact"},{"name":"reduced vacuolar histidine level","type":"exact"}],"termid":"FYPO:0001611"}


id: GO:0030982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the controlled movement of a bacterial cell powered by the rearward secretion of carbohydrate slime.","definition_xrefs":["GOC:mlg","PMID:11967173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adventurous gliding motility","synonyms":[{"name":"adventurous gliding movement","type":"exact"}],"termid":"GO:0030982"}


id: PBO:0068556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 7, pseudogene","termid":"PBO:0068556"}


id: PBO:0077848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan hydroxylase 2","termid":"PBO:0077848"}


id: PBO:0074141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B1","termid":"PBO:0074141"}


id: PBO:0030741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tapered_cell_during_nitrogen_starvation","termid":"PBO:0030741"}


id: GO:0021754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the facial nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:curators","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nucleus development","termid":"GO:0021754"}


id: GO:0009001
data:
  {"annotated_genes":["SJAG_04305","SJAG_05413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86780,97687],"is_not":false,"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + acetyl-CoA = O-acetyl-L-serine + CoA.","definition_xrefs":["EC:2.3.1.30","RHEA:24560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine O-acyltransferase activity","termid":"GO:0016412"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04305":null,"SJAG_05413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"serine O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00586","MetaCyc:SERINE-O-ACETTRAN-RXN"],"synonyms":[{"name":"L-serine acetyltransferase activity","type":"related"},{"name":"SATase activity","type":"related"},{"name":"acetyl-CoA:L-serine O-acetyltransferase activity","type":"related"},{"name":"serine acetyltransferase activity","type":"related"},{"name":"serine transacetylase activity","type":"related"}],"termid":"GO:0009001","terms_by_termid":{"GO:0009001":null}}


id: FYPO:0001141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abolished transcriptional response to pheromone","synonyms":[{"name":"abolished regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"transcriptional response to pheromone abolished","type":"exact"}],"termid":"FYPO:0001141"}


id: GO:0006298
data:
  {"annotated_genes":["SJAG_03722","SJAG_01807","SJAG_02187","SJAG_04190","SJAG_04410","SJAG_02261","SJAG_02748","SJAG_01887","SJAG_01620","SJAG_01262","SJAG_01419","SJAG_02226","SJAG_01049","SJAG_02039","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61322,83765,84085,87293,90519,100067,100416,101812,101946,103659,111753,112342,112526,113232],"is_not":false,"summary":null,"term":"GO:0006298"},{"annotations":[87292,103658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000710"},{"annotations":[93840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070716"},{"annotations":[93842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.","definition_xrefs":["ISBN:0198506732","PMID:11687886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_01832":null,"SJAG_01887":null,"SJAG_02039":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02261":null,"SJAG_02748":null,"SJAG_03722":null,"SJAG_04190":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"mismatch repair","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:DNA_mismatch_repair","GO:0006300"],"synonyms":[{"name":"MMR","type":"exact"},{"name":"MutS/MutL/MutH pathway","type":"related"},{"name":"long patch mismatch repair system","type":"narrow"},{"name":"mismatch repair, MutL-like pathway","type":"related"}],"termid":"GO:0006298","terms_by_termid":{"GO:0000710":null,"GO:0006298":null,"GO:0070716":null,"GO:1990516":null}}


id: PR:O42936
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- las1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein las1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.12c","synonyms":[{"name":"Spom972h-las1","type":"exact"}],"termid":"PR:O42936"}


id: PATO:0000447
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000447 decreased percentage (obsolete PATO:0000447)","termid":"PATO:0000447"}


id: GO:1904184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:25525879","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of pyruvate dehydrogenase activity","termid":"GO:1904182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyruvate dehydrogenase activity","synonyms":[{"name":"activation of pyruvate dehydrogenase activity","type":"narrow"},{"name":"activation of pyruvic acid dehydrogenase activity","type":"narrow"},{"name":"activation of pyruvic dehydrogenase activity","type":"narrow"},{"name":"positive regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"positive regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"up regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"up regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"up regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"up-regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"up-regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"up-regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"upregulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"upregulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"upregulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904184"}


id: PBO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 3","termid":"PBO:0048741"}


id: PBO:0042824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 3","termid":"PBO:0042824"}


id: MOD:01580
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01580"}


id: FYPO:0005413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the first meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis","termid":"FYPO:0003611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during meiosis I","synonyms":[{"name":"increased protein accumulation during meiosis I","type":"related"},{"name":"increased protein level during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005413"}


id: PBO:0110243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex histone fold subunit Php5","termid":"PBO:0110243"}


id: GO:0035656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to melanosomes.","definition_xrefs":["PMID:19841138"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated melanosomal adaptor activity (obsolete GO:0035656)","synonyms":[{"name":"kinesin-melanosome adaptor activity","type":"exact"}],"termid":"GO:0035656"}


id: GO:0009566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).","definition_xrefs":["GOC:tb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fertilization","secondary_identifiers":["Wikipedia:Fertilisation"],"synonyms":[{"name":"syngamy","type":"exact"}],"termid":"GO:0009566"}


id: GO:0006050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine metabolic process","synonyms":[{"name":"mannosamine metabolism","type":"exact"}],"termid":"GO:0006050"}


id: PBO:0089715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Pex1","termid":"PBO:0089715"}


id: PBO:0061462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of antiviral response","termid":"PBO:0061462"}


id: PBO:0061794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontogenic, ameloblast associated","termid":"PBO:0061794"}


id: PBO:0017813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, WW domain -binding Rbm42 (predicted)","termid":"PBO:0017813"}


id: internal:alternate
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate","termid":"internal:alternate"}


id: PBO:0082434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Broad specificity amino acid permease; high-affinity glutamine permease; major serine permease with minor contributions from paralog Agp1p; role in serine uptake impacts cellular sphingolipid homeostasis; also transports Leu, Thr, Cys, Met and Asn; expression is fully dependent on Grr1p and modulated by the Ssy1p-Ptr3p-Ssy5p (SPS) sensor of extracellular amino acids","termid":"PBO:0082434"}


id: GO:2000184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progesterone biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of progesterone biosynthetic process","termid":"GO:2000182"},{"relation_name":"positively_regulates","term_name":"progesterone biosynthetic process","termid":"GO:0006701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of progesterone biosynthetic process","synonyms":[{"name":"positive regulation of progesterone anabolism","type":"exact"},{"name":"positive regulation of progesterone biosynthesis","type":"exact"},{"name":"positive regulation of progesterone formation","type":"exact"},{"name":"positive regulation of progesterone synthesis","type":"exact"}],"termid":"GO:2000184"}


id: GO:0018697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbonyl sulfide + 2 H+ + 2 e- = hydrogen sulfide + carbon monoxide.","definition_xrefs":["UM-BBD_reactionID:r0600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor","termid":"GO:0016732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carbonyl sulfide nitrogenase activity","secondary_identifiers":["EC:1.18.6.1"],"synonyms":[{"name":"carbonyl sulphide nitrogenase activity","type":"exact"}],"termid":"GO:0018697"}


id: GO:2001059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a D-tagatose 6-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-tagatose 6-phosphate metabolic process","termid":"GO:2001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-tagatose 6-phosphate catabolic process","secondary_identifiers":["UniPathway:UPA00704"],"synonyms":[{"name":"D-tagatose 6-phosphate catabolism","type":"exact"}],"termid":"GO:2001059"}


id: PBO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 7","termid":"PBO:0075177"}


id: GO:1904677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell division.","definition_xrefs":["PMID:19409607","GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell division","termid":"GO:1904675"},{"relation_name":"positively_regulates","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell division","synonyms":[{"name":"activation of somatic stem cell division","type":"narrow"},{"name":"activation of somatic stem cell renewal","type":"narrow"},{"name":"positive regulation of somatic stem cell renewal","type":"exact"},{"name":"up regulation of somatic stem cell division","type":"exact"},{"name":"up regulation of somatic stem cell renewal","type":"exact"},{"name":"up-regulation of somatic stem cell division","type":"exact"},{"name":"up-regulation of somatic stem cell renewal","type":"exact"},{"name":"upregulation of somatic stem cell division","type":"exact"},{"name":"upregulation of somatic stem cell renewal","type":"exact"}],"termid":"GO:1904677"}


id: PBO:0055114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2533","termid":"PBO:0055114"}


id: FYPO:0005459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair via nonhomologous end joining (NHEJ) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-strand break repair","termid":"FYPO:0005436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abolished double-strand break repair via nonhomologous end joining","synonyms":[{"name":"abolished double-strand break repair via NHEJ","type":"exact"},{"name":"abolished double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"abolished double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"double-strand break repair via nonhomologous end joining abolished","type":"exact"}],"termid":"FYPO:0005459"}


id: GO:0019496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A one-carbon metabolic process in which acetyl-CoA is produced from formaldehyde and carbon dioxide.","definition_xrefs":["ISBN:0387961534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon metabolic process","termid":"GO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"serine-isocitrate lyase pathway","termid":"GO:0019496"}


id: PBO:0083184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the Ty1 long terminal repeat, YPRWdelta12","termid":"PBO:0083184"}


id: PBO:0003978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate dehydratase His5","termid":"PBO:0003978"}


id: GO:0033550
data:
  {"annotated_genes":["SJAG_02013","SJAG_03263","SJAG_02000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87194,90701,99643],"is_not":false,"summary":null,"term":"GO:0033550"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: MAP kinase tyrosine phosphate + H2O = MAP kinase tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"},{"relation_name":"is_a","term_name":"MAP kinase phosphatase activity","termid":"GO:0033549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0004721","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"MAP kinase tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tyrosine-specific MAP kinase phosphatase activity","type":"exact"}],"termid":"GO:0033550","terms_by_termid":{"GO:0033550":null}}


id: PBO:0089261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic alanine-tRNA ligase Ala1","termid":"PBO:0089261"}


id: GO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a renal fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast fate commitment","synonyms":[{"name":"kidney interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072153"}


id: GO:0046882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonadotropin secretion","termid":"GO:0032277"},{"relation_name":"is_a","term_name":"regulation of follicle-stimulating hormone secretion","termid":"GO:0046880"},{"relation_name":"negatively_regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"down regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"down-regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"downregulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"inhibition of follicle-stimulating hormone secretion","type":"narrow"},{"name":"negative regulation of follicle stimulating hormone secretion","type":"exact"}],"termid":"GO:0046882"}


id: GO:1901996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of indoleacetic acid biosynthetic process via tryptophan.","definition_xrefs":["GOC:TermGenie","PMID:23377040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of auxin biosynthetic process","termid":"GO:0010600"},{"relation_name":"is_a","term_name":"regulation of tryptophan metabolic process","termid":"GO:0090357"},{"relation_name":"regulates","term_name":"indoleacetic acid biosynthetic process via tryptophan","termid":"GO:0009848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of indoleacetic acid biosynthetic process via tryptophan","synonyms":[{"name":"regulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"regulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"regulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"regulation of indoleacetic acid synthesis via tryptophan","type":"exact"}],"termid":"GO:1901996"}


id: PBO:0087877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; involved in regulation of gluconeogenesis and fermentable carbon utilization; GFP-fusion protein localizes to cytoplasm, nucleus; null mutation affects periodicity of transcriptional and metabolic oscillation; plays role in restricting Ty1 transposition; member of the zinc cluster family of proteins, similar to Rds2p","termid":"PBO:0087877"}


id: PBO:0054234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1616","termid":"PBO:0054234"}


id: GO:0070457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose-1-phosphate + H2O = D-galactose + phosphate.","definition_xrefs":["GOC:mah","PMID:9462881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-galactose-1-phosphate phosphatase activity","termid":"GO:0070457"}


id: GO:0009410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to xenobiotic stimulus","secondary_identifiers":["GO:0017035","GO:0017104","GO:0042493"],"synonyms":[{"name":"drug resistance","type":"related"},{"name":"drug susceptibility/resistance","type":"related"},{"name":"response to drug","type":"related"}],"termid":"GO:0009410"}


id: PBO:0073433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 3","termid":"PBO:0073433"}


id: PBO:0039112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of HSP90 ATPase activity 1","termid":"PBO:0039112"}


id: PBO:0090512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate-tRNA ligase Dar2","termid":"PBO:0090512"}


id: PBO:0012591
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature initiation of mitosis","termid":"PBO:0012591"}


id: PBO:0077157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC/LysM-associated domain containing 2","termid":"PBO:0077157"}


id: PBO:0075444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPART antisense RNA 1","termid":"PBO:0075444"}


id: PBO:0064690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 26","termid":"PBO:0064690"}


id: PBO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf4 (predicted)","termid":"PBO:0000639"}


id: PBO:0080762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 1","termid":"PBO:0080762"}


id: GO:0098722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity.","definition_xrefs":["GOC:dos","PMID:18513950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric stem cell division","termid":"GO:0098722"}


id: GO:0007542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transmission of information about sexual status, from the initial general determination, to signals specific to the germ-line.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination","termid":"GO:0007538"},{"relation_name":"part_of","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination, germ-line","termid":"GO:0007542"}


id: PR:Q9P6I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cha4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1683.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.13c","synonyms":[{"name":"Spom972h-cha4","type":"exact"}],"termid":"PR:Q9P6I9"}


id: PBO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHSL1 antisense RNA 1","termid":"PBO:0061006"}


id: GO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a mechanical stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050974"}


id: GO:0097418
data:
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id: PBO:0074112
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id: PBO:0051554
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id: PBO:0058619
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id: PBO:0089411
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id: PBO:0038987
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id: PBO:0000905
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id: PATO:0001354
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id: GO:0055116
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id: PBO:0054174
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id: FYPO:0001677
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id: PBO:0085616
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id: GO:0006796
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id: GO:0075505
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id: GO:1902993
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id: GO:0048777
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id: PBO:0027203
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id: GO:0018128
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id: PBO:0003902
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id: GO:0051332
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id: GO:0042762
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id: FYPO:0005979
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id: PBO:0052569
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id: PBO:0033777
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id: PBO:0044898
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id: GO:0003330
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id: PR:Q9Y824
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id: GO:0010898
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.","definition_xrefs":["GOC:tb","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride catabolic process","termid":"GO:0010896"},{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"positive regulation of triglyceride metabolic process","termid":"GO:0090208"},{"relation_name":"positively_regulates","term_name":"triglyceride catabolic process","termid":"GO:0019433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"positive regulation of triglyceride catabolic process","synonyms":[{"name":"positive regulation of triacylglycerol catabolic process","type":"exact"}],"termid":"GO:0010898"}


id: GO:0061982
data:
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id: GO:0031737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CX3C chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CX3C chemokine receptor binding","synonyms":[{"name":"CX3C chemokine receptor ligand","type":"narrow"},{"name":"fractalkine receptor binding","type":"exact"}],"termid":"GO:0031737"}


id: PR:Q1MTR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.14c gene.","definition_xrefs":["UniProtKB:Q1MTR7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C16H5.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.14c","synonyms":[{"name":"Spom972h-SPBC16H5.14c","type":"exact"}],"termid":"PR:Q1MTR7"}


id: PBO:0056426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 1","termid":"PBO:0056426"}


id: PBO:0073137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog A, vesicle trafficking protein","termid":"PBO:0073137"}


id: PBO:0083449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CDC9/YDL164C encoding DNA ligase","termid":"PBO:0083449"}


id: GO:0043447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane biosynthetic process","synonyms":[{"name":"alkane anabolism","type":"exact"},{"name":"alkane biosynthesis","type":"exact"},{"name":"alkane formation","type":"exact"},{"name":"alkane synthesis","type":"exact"}],"termid":"GO:0043447"}


id: PBO:0067312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 398, pseudogene","termid":"PBO:0067312"}


id: GO:0034856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4E)-2-hydroxyhexa-2,4-dienoate + H2O = 4-hydroxy-2-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r1281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyhexa-2,4-dienoate hydratase activity","secondary_identifiers":["RHEA:32535","EC:4.2.1.132"],"termid":"GO:0034856"}


id: PBO:0027878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_binding","termid":"PBO:0027878"}


id: PR:Q9P7H5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA-processing protein cox24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.04","synonyms":[{"name":"Spom972h-cox24","type":"exact"}],"termid":"PR:Q9P7H5"}


id: PBO:0004812
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.117","termid":"PBO:0004812"}


id: PBO:0047023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A26","termid":"PBO:0047023"}


id: PBO:0086706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mCherry fusion protein localizes to the cytosol and nucleus","termid":"PBO:0086706"}


id: GO:0051946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"regulation of L-glutamate reuptake","type":"exact"},{"name":"regulation of L-glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of glutamate reuptake","type":"exact"},{"name":"regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"regulation of glutamate uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051946"}


id: PR:P07657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05073","PANTHER:PTHR10422:SF6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.01","secondary_identifiers":["UniProtKB:P07657"],"synonyms":[{"name":"Spom972h-MT-CO1","type":"exact"},{"name":"cytochrome c oxidase polypeptide I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P07657"}


id: PBO:0030766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mitomycin_C","termid":"PBO:0030766"}


id: GO:0061779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Subunit of the MHC class I peptide loading complex (GO:0042824) (=PLC) involved in the assembly of the heavy-chain-beta2-microglobulin dimers of the MHC class I molecules that fold with eight to ten residue peptides in the endoplasmic reticulum. Required for the inhibition of the reduction of the disulfide bonds of the heavy chains and the assembly and stabilization of the PLC, suggesting it may play a structural rather than a catalytic role.","definition_xrefs":["PMID:17603487","Intact:EBI-9013963","GOC:bhm","GOC:dph","Intact:EBI-11896237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"MHC class I peptide loading complex","termid":"GO:0042824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005789","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Tapasin-ERp57 complex","termid":"GO:0061779"}


id: PBO:0013096
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sty1 iNteracting stress Response protein","termid":"PBO:0013096"}


id: PBO:0078453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5P (pseudogene)","termid":"PBO:0078453"}


id: GO:0045967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the rate of growth of all or part of an organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth rate","termid":"GO:0040009"},{"relation_name":"is_a","term_name":"negative regulation of growth","termid":"GO:0045926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth rate","synonyms":[{"name":"down regulation of growth rate","type":"exact"},{"name":"down-regulation of growth rate","type":"exact"},{"name":"downregulation of growth rate","type":"exact"},{"name":"inhibition of growth rate","type":"narrow"}],"termid":"GO:0045967"}


id: GO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a processed miRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:21554756","PMID:15738428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA export from nucleus","termid":"GO:0097064"},{"relation_name":"is_a","term_name":"miRNA transport","termid":"GO:1990428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"miRNA export from nucleus","termid":"GO:0061716"}


id: GO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"beta-alanine transport","termid":"GO:0001762"}


id: GO:0004114
data:
  {"annotated_genes":["SJAG_01245","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004115"},{"annotations":[112475,96206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside 3',5'-cyclic phosphate + H2O = a nucleoside 5'-phosphate.","definition_xrefs":["RHEA:14653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"3',5'-cyclic-nucleotide phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.4.17-RXN","EC:3.1.4.17","Reactome:R-HSA-162425"],"synonyms":[{"name":"3', 5'-cyclic nucleoside monophosphate phosphodiesterase activity","type":"related"},{"name":"3',5' cyclic-nucleotide phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-nucleotide 5'-nucleotidohydrolase activity","type":"related"},{"name":"3',5'-cyclonucleotide phosphodiesterase activity","type":"related"},{"name":"3',5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"3': 5'-monophosphate phosphodiesterase (cyclic CMP) activity","type":"related"},{"name":"3':5'-cyclic nucleotide 5'-nucleotidohydrolase activity","type":"related"},{"name":"PDE","type":"related"},{"name":"cyclic 3',5'-mononucleotide phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5'-phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5-nucleotide monophosphate phosphodiesterase activity","type":"related"},{"name":"cyclic AMP phosphodiesterase activity","type":"narrow"},{"name":"cyclic nucleotide phosphodiesterase activity","type":"related"},{"name":"cytidine 3':5'-monophosphate phosphodiesterase (cyclic CMP) activity","type":"related"},{"name":"nucleoside 3',5'-cyclic phosphate diesterase activity","type":"related"},{"name":"nucleoside-3',5-monophosphate phosphodiesterase activity","type":"related"}],"termid":"GO:0004114","terms_by_termid":{"GO:0004115":null,"GO:0047555":null}}


id: FYPO:0008144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount heme O measured in a cell is too low to detect.","definition_xrefs":["PMID:11248251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme absent from cell","termid":"FYPO:0008142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"heme O absent from cell","termid":"FYPO:0008144"}


id: PBO:0054860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2274","termid":"PBO:0054860"}


id: PBO:0091494
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hal3 N-term functionally complements S. cerevisiae HAL3","termid":"PBO:0091494"}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: PBO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 2","termid":"PBO:0050577"}


id: GO:0032244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"positively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleoside transport","synonyms":[{"name":"activation of nucleoside transport","type":"narrow"},{"name":"stimulation of nucleoside transport","type":"narrow"},{"name":"up regulation of nucleoside transport","type":"exact"},{"name":"up-regulation of nucleoside transport","type":"exact"},{"name":"upregulation of nucleoside transport","type":"exact"}],"termid":"GO:0032244"}


id: FYPO:0007258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic spindle pole body duplication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","termid":"FYPO:0007113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body duplication","synonyms":[{"name":"abnormal meiotic SPB duplication","type":"exact"},{"name":"abnormal spindle pole body duplication during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007258"}


id: PBO:0077947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 7-1","termid":"PBO:0077947"}


id: FYPO:0000727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of cytoskeletal structures comprising actin filaments does not occur normally.","definition_xrefs":["PomBase:mah","GO:0007015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin filament organization during vegetative growth","synonyms":[{"name":"abnormal actin filament organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of actin filament localization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000727"}


id: PBO:0046191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 2","termid":"PBO:0046191"}


id: PR:Q10487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs1 gene.","definition_xrefs":["UniProtKB:Q10487","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter mfs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.16c","synonyms":[{"name":"Spom972h-mfs1","type":"exact"}],"termid":"PR:Q10487"}


id: PBO:0036304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg11","termid":"PBO:0036304"}


id: PATO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the back or upper surface of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised dorsally","termid":"PATO:0001919"}


id: PBO:0055454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2886","termid":"PBO:0055454"}


id: GO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an integrin.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"},{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"integrin binding","synonyms":[{"name":"integrin ligand","type":"narrow"}],"termid":"GO:0005178"}


id: GO:0120309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the lateral attachment of the cilium to the cell body via the flagellar attachment zone in some trypanosomatid species.","definition_xrefs":["GOC:krc","PMID:11877446","PMID:18820079","PMID:22623724","PMID:26272611","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium attachment to cell body","synonyms":[{"name":"cilial attachment to cell body","type":"exact"},{"name":"ciliary attachment to cell body","type":"exact"},{"name":"flagellar attachment to cell body","type":"exact"},{"name":"flagellum attachment to cell body","type":"exact"}],"termid":"GO:0120309"}


id: PBO:0075648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 3","termid":"PBO:0075648"}


id: FYPO:0001306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which long-chain fatty acid-CoA ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abolished long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abolished lcfa-ligase activity","type":"exact"},{"name":"long-chain fatty acid-CoA ligase activity abolished","type":"exact"}],"termid":"FYPO:0001306"}


id: MOD:00078
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N(omega)-methyl-L-arginine.","definition_xrefs":["PubMed:2426402","PubMed:5128665","PubMed:11875433","RESID:AA0069","PubMed:15835918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"omega-N-methyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-[(imino(methylamino)methyl)amino]pentanoic acid","type":"exact"},{"name":"MOD_RES Omega-N-methylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"NG-methylarginine","type":"exact"},{"name":"NoMeArg","type":"exact"},{"name":"omega-N-methyl-L-arginine","type":"exact"},{"name":"omega-N-methylated L-arginine","type":"exact"}],"termid":"MOD:00078"}


id: GO:0072649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-kappa due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-kappa production","secondary_identifiers":["GO:0072650"],"synonyms":[{"name":"IFN-kappa production","type":"exact"},{"name":"IFNK production","type":"exact"},{"name":"interferon-kappa secretion","type":"narrow"}],"termid":"GO:0072649"}


id: GO:0015607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction ATP + H2O + fatty acyl CoA(Side 1) = ADP + phosphate + fatty acyl CoA(Side 2). A fatty acyl CoA group is any acyl group derived from a fatty acid with a coenzyme A group attached to it.","definition_xrefs":["RHEA:15181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ATPase-coupled lipid transmembrane transporter activity","termid":"GO:0034040"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"adenosine 3',5'-bisphosphate transmembrane transporter activity","termid":"GO:0071077"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type fatty-acyl-CoA transporter activity","secondary_identifiers":["MetaCyc:3.6.3.47-RXN","EC:7.6.2.4"],"synonyms":[{"name":"ABC-type fatty-acyl-CoA transporter","type":"exact"},{"name":"ATPase-coupled fatty-acyl-CoA transmembrane transporter activity","type":"related"},{"name":"fatty acyl CoA transporter activity","type":"related"},{"name":"fatty-acyl-CoA transmembrane transporter activity","type":"broad"},{"name":"fatty-acyl-CoA-transporting ATPase","type":"related"}],"termid":"GO:0015607"}


id: GO:0046678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacteriocin stimulus. A bacteriocin is a protein substance released by certain bacteria that kills but does not lyse closely related strains of bacteria. Specific bacteriocins attach to specific receptors on cell walls and induce specific metabolic block, e.g. cessation of nucleic acid or protein synthesis of oxidative phosphorylation.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to peptide","termid":"GO:1901652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacteriocin","synonyms":[{"name":"bacteriocin susceptibility/resistance","type":"related"}],"termid":"GO:0046678"}


id: PBO:0086046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in RNA metabolism; has structural similarity to SBDS, the human protein mutated in Shwachman-Diamond Syndrome (the yeast SBDS ortholog is SDO1); null mutation suppresses cdc13-1 temperature sensitivity; protein abundance increases in response to DNA replication stress","termid":"PBO:0086046"}


id: PBO:0044689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin domain receptor tyrosine kinase 1","termid":"PBO:0044689"}


id: PR:Q9Y876
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psh3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory component protein psh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.20c","synonyms":[{"name":"Spom972h-psh3","type":"exact"}],"termid":"PR:Q9Y876"}


id: PR:O94657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- xdj1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ protein homolog xdj1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.06","synonyms":[{"name":"Spom972h-xdj1","type":"exact"}],"termid":"PR:O94657"}


id: PBO:0045287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 38","termid":"PBO:0045287"}


id: PBO:0068072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 377","termid":"PBO:0068072"}


id: GO:0061588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a population of phospholipid molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet as a result of a calcium stimulus.","definition_xrefs":["PMID:23532839","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium activated phospholipid scrambling","termid":"GO:0061588"}


id: PBO:0081100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 1","termid":"PBO:0081100"}


id: FYPO:0001412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular sulfide level","termid":"FYPO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular sulfide level","synonyms":[{"name":"decreased cellular acid labile sulfide level","type":"exact"},{"name":"decreased cellular sulfide accumulation","type":"related"},{"name":"decreased cellular sulfide ion level","type":"exact"},{"name":"decreased cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sulfide level during vegetative growth","type":"exact"},{"name":"decreased cellular sulphide level","type":"exact"},{"name":"reduced cellular sulfide level","type":"exact"}],"termid":"FYPO:0001412"}


id: PBO:0073016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit gamma","termid":"PBO:0073016"}


id: GO:0072487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residue at position 16. In human, it contains the catalytic subunit MOF, and MSL1, MSL2 and MSL3.","definition_xrefs":["PMID:16227571","PMID:20018852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"MSL complex","termid":"GO:0072487"}


id: PBO:0042525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2 pseudogene 3","termid":"PBO:0042525"}


id: GO:1990873
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane surrounding the cell tip consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the plasma membrane surrounding the cell tip or some other covalently attached group such as a GPI anchor that is similarly embedded in the plasma membrane surrounding the cell tip.","definition_xrefs":["PMID:20624220"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plasma membrane of cell tip (obsolete GO:1990873)","termid":"GO:1990873"}


id: PBO:0061138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME2 pseudogene 2","termid":"PBO:0061138"}


id: PBO:0056897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 2","termid":"PBO:0056897"}


id: PBO:0029752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_modification","termid":"PBO:0029752"}


id: PR:Q9UT41
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bst1 gene.","definition_xrefs":["UniProtKB:Q9UT41","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol-deacylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.02","synonyms":[{"name":"Spom972h-bst1","type":"exact"}],"termid":"PR:Q9UT41"}


id: PBO:0090958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S19","termid":"PBO:0090958"}


id: FYPO:0003979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes, a single, normally located septum, and 1C DNA content in each nucleus, under conditions where arrest does not normally occur.","definition_xrefs":["PMID:8313905","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell","termid":"FYPO:0004719"},{"relation_name":"output_of","term_name":"abnormal exit from mitosis","termid":"FYPO:0003972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000337"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus","synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C nuclei","type":"exact"}],"termid":"FYPO:0003979"}


id: GO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylthiopropyl-glucosinolate = 6-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"6-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080105"}


id: GO:0016256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of high-mannose N-glycans by UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase and the subsequent removal of the N-acetylglucosamine residues yielding mannose-6-P that occurs in the ER-Golgi apparatus to N-glycans destined for the lysosome.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"},{"relation_name":"part_of","term_name":"protein targeting to lysosome","termid":"GO:0006622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"N-glycan processing to lysosome","termid":"GO:0016256"}


id: PATO:0001261
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark red","termid":"PATO:0001261"}


id: FYPO:0007081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and normally occurs as part of the first meiotic nuclear division, does not occur.","definition_xrefs":["PMID:31532702","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal initial meiotic spindle pole body separation in meiosis I","termid":"FYPO:0007080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abolished initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abolished initial mitotic SPB separation in meiosis I","type":"exact"},{"name":"abolished meiotic spindle pole body separation during meiosis I","type":"exact"},{"name":"initial meiotic spindle pole body separation in meiosis I abolished","type":"exact"}],"termid":"FYPO:0007081"}


id: GO:0009659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucoplast organization","synonyms":[{"name":"leucoplast organisation","type":"exact"},{"name":"leucoplast organization and biogenesis","type":"related"}],"termid":"GO:0009659"}


id: PBO:0063363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 2","termid":"PBO:0063363"}


id: PBO:0080888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein C1","termid":"PBO:0080888"}


id: PBO:0072530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 60","termid":"PBO:0072530"}


id: GO:0015801
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[63232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of aromatic amino acids, amino acids with aromatic ring, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"aromatic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015801","terms_by_termid":{"GO:0015828":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null}}


id: GO:1905058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium-induced calcium release activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","PMID:23639769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-induced calcium release activity","termid":"GO:0048763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905058"}


id: PBO:0083268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene SRP54; deletion causes a vacuolar protein sorting defect","termid":"PBO:0083268"}


id: PBO:0029510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_septated_cells_(obsolete_FYPO:0002204)","termid":"PBO:0029510"}


id: GO:0031599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The regulatory subcomplex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle (obsolete GO:0031599)","termid":"GO:0031599"}


id: PBO:0079302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 1","termid":"PBO:0079302"}


id: PBO:0091402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12","termid":"PBO:0091402"}


id: PBO:0041988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 32","termid":"PBO:0041988"}


id: GO:2000607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in kidney development","termid":"GO:1901723"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in mesonephros development","termid":"GO:2000607"}


id: PBO:0108987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 11","termid":"PBO:0108987"}


id: FYPO:0001642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-phenylalanine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phenylalanine level","synonyms":[{"name":"normal cellular L-phenylalanine level","type":"exact"},{"name":"normal cellular phenylalanine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phenylalanine level during vegetative growth","type":"exact"},{"name":"normal level of phenylalanine in cell","type":"exact"}],"termid":"FYPO:0001642"}


id: PBO:0109600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARB2 family member B, pseudogene","termid":"PBO:0109600"}


id: GO:0102263
data:
  {"annotated_genes":["SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105576],"is_not":false,"summary":null,"term":"GO:0102263"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil17 in tRNA + NAD(P) = H+ + a uracil17 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA-dihydrouridine17 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.3.1.88","MetaCyc:RXN-12455"],"termid":"GO:0102263","terms_by_termid":{"GO:0102263":null}}


id: GO:0075178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium or calmodulin-mediated signal transduction in response to host (obsolete GO:0075178)","synonyms":[{"name":"positive regulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of symbiont calcium or calmodulin-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075178"}


id: FYPO:0003777
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum","termid":"FYPO:0006377"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"abnormal protein localization to ER during vegetative growth","type":"exact"},{"name":"abnormal protein localization to endoplasmic reticulum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003777","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0051158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38 (non-functional)","termid":"PBO:0051158"}


id: PBO:0090100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase mvd1","termid":"PBO:0090100"}


id: PBO:0058903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12121","termid":"PBO:0058903"}


id: PBO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid P component, serum","termid":"PBO:0039692"}


id: GO:0042632
data:
  {"annotated_genes":["SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83961],"is_not":false,"summary":null,"term":"GO:0042632"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of cholesterol within an organism or cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol homeostasis","termid":"GO:0055092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholesterol homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2000189","GO:2000188"],"synonyms":[{"name":"positive regulation of cholesterol homeostasis","type":"related"},{"name":"regulation of cholesterol homeostasis","type":"related"}],"termid":"GO:0042632","terms_by_termid":{"GO:0042632":null}}


id: PBO:0065350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked 2","termid":"PBO:0065350"}


id: FYPO:0006410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell is lower than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular nitric oxide level during stationary phase","synonyms":[{"name":"decreased cellular NO level during stationary phase","type":"exact"},{"name":"decreased cellular nitric oxide level in stationary phase","type":"exact"},{"name":"decreased nitric oxide accumulation during stationary phase","type":"related"},{"name":"reduced cellular nitric oxide level during stationary phase","type":"exact"}],"termid":"FYPO:0006410"}


