# terms

id: GO:0062067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast photosystem I.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chloroplast photosystem I binding","termid":"GO:0062067"}


id: RO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","termid":"RO:0002216"}


id: PBO:0084672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial AMPylator in the pseudokinase selenoprotein-O family; role in the oxidative stress response, transferring AMP from ATP to protein substrates (AMPylation) involved in redox homeostasis; regulates S-glutathionylation levels; proposed involvement in the environmental stress response","termid":"PBO:0084672"}


id: PBO:0068526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 125, pseudogene","termid":"PBO:0068526"}


id: PBO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium ion transmembrane transporter (predicted)","termid":"PBO:0018035"}


id: PBO:0067331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 423, pseudogene","termid":"PBO:0067331"}


id: GO:0005648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, beta-subunit (obsolete GO:0005648)","synonyms":[{"name":"importin, beta-subunit","type":"exact"},{"name":"karyopherin-beta1","type":"exact"}],"termid":"GO:0005648"}


id: PR:000050514
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the alp7 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule protein alp7 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"SPAC890.02c","type":"related"},{"name":"Spom-alp7","type":"exact"},{"name":"TACC protein mia1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"alp7","type":"related"},{"name":"altered polarity protein 7 (Schizosaccharomyces pombe)","type":"exact"},{"name":"mia1","type":"related"},{"name":"transforming acidic coiled-coil protein mia1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050514"}


id: PBO:0081140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP37 zinc finger protein","termid":"PBO:0081140"}


id: PBO:0071718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 16","termid":"PBO:0071718"}


id: PBO:0056709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 1","termid":"PBO:0056709"}


id: PBO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0002829"}


id: PBO:0051977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 4","termid":"PBO:0051977"}


id: PBO:0078262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 1-1","termid":"PBO:0078262"}


id: PBO:0027294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell_with_fragmented_septum","termid":"PBO:0027294"}


id: PBO:0069926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1218, pseudogene","termid":"PBO:0069926"}


id: GO:0031990
data:
  {"annotated_genes":["SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112504],"is_not":false,"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA from the nucleus to the cytoplasm during a heat stimulus, a temperature stimulus above the optimal temperature for the organism; in particular, a process that enables an organism withstand exposure to temperatures that would otherwise lethally impair poly(A)+ mRNA-nucleus export.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA export from nucleus","termid":"GO:0006406"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01584":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0010467","GO:0006913"],"is_obsolete":false,"name":"mRNA export from nucleus in response to heat stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA export from cell nucleus during heat stress","type":"exact"},{"name":"mRNA export from nucleus during heat stress","type":"related"}],"termid":"GO:0031990","terms_by_termid":{"GO:0031990":null}}


id: GO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specific behavior of a newborn or infant mammal that results in the derivation of nourishment from the breast.","definition_xrefs":["GOC:pr","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suckling behavior","synonyms":[{"name":"nursing behavior","type":"exact"}],"termid":"GO:0001967"}


id: GO:0035640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism in response to a novel environment or stimulus.","definition_xrefs":["PMID:9767169","GOC:pr","GOC:BHF","PMID:11682103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exploration behavior","synonyms":[{"name":"exploration behaviour","type":"exact"},{"name":"exploratory behavior","type":"exact"},{"name":"exploratory behaviour","type":"exact"},{"name":"open-field behavior","type":"narrow"}],"termid":"GO:0035640"}


id: PBO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 11","termid":"PBO:0071334"}


id: PATO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A growth quality of a process inhering in an organism, structure, or group of organisms by virtue of the bearer's reduced or increased growth.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth quality of occurrent","termid":"PATO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochronic growth","termid":"PATO:0001490"}


id: PBO:0063570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase E","termid":"PBO:0063570"}


id: GO:0008962
data:
  {"annotated_genes":["SJAG_03700"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113942],"is_not":false,"summary":null,"term":"GO:0008962"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerophosphate + H2O = phosphatidylglycerol + phosphate.","definition_xrefs":["PMID:4292860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphatidylglycerophosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:16725","MetaCyc:PGPPHOSPHA-RXN","EC:3.1.3.27","Reactome:R-HSA-1483197"],"synonyms":[{"name":"PGP phosphatase activity","type":"related"},{"name":"phosphatidylglycerol phosphatase activity","type":"related"},{"name":"phosphatidylglycerol phosphate phosphatase activity","type":"related"},{"name":"phosphatidylglycerophosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0008962","terms_by_termid":{"GO:0008962":null}}


id: PBO:0018236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid4 (predicted)","termid":"PBO:0018236"}


id: FYPO:0001286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphoinositide measured in a cell is higher than normal. A phosphoinositide is any phosphatidylinositol that is phosphorylated at one or more of the hydroxy groups of inositol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"},{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphoinositide level","synonyms":[{"name":"increased PI accumulation","type":"related"},{"name":"increased cellular PI level","type":"related"},{"name":"increased cellular phosphoinositide level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphoinositide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001286"}


id: MOD:00668
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a decanoyloxy group.","definition_xrefs":["Unimod:449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decanoylated residue","termid":"MOD:00667"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-decanoylated residue","synonyms":[{"name":"Decanoyl","type":"related"},{"name":"ODecRes","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00668"}


id: GO:1901738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitamin A metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:18093975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"regulates","term_name":"vitamin A metabolic process","termid":"GO:0006776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0006766"],"is_obsolete":false,"name":"regulation of vitamin A metabolic process","synonyms":[{"name":"regulation of vitamin A metabolism","type":"exact"}],"termid":"GO:1901738"}


id: PBO:0030133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_zinc_level","termid":"PBO:0030133"}


id: SO:0100017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved motif is a short (up to 20 amino acids) region of biological interest that is conserved in different proteins. They may or may not have functional or structural significance within the proteins in which they are found.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_motif","termid":"SO:0001067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_conserved_motif","synonyms":[{"name":"motif","type":"related"}],"termid":"SO:0100017"}


id: PBO:0063118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 4","termid":"PBO:0063118"}


id: PBO:0071094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 96","termid":"PBO:0071094"}


id: GO:0035486
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93900],"is_not":false,"summary":null,"term":"GO:0035486"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a C/C mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"cytosine/cytosine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C/C mispair binding","type":"exact"}],"termid":"GO:0035486","terms_by_termid":{"GO:0035486":null}}


id: PBO:0068233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 4","termid":"PBO:0068233"}


id: GO:0009629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gravity","synonyms":[{"name":"response to gravitational stimulus","type":"exact"}],"termid":"GO:0009629"}


id: GO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose without proceeding through a cyclic ADP-ribose intermediate.","definition_xrefs":["GOC:pde","GOC:pad","PMID:11866528","GOC:PARL","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD glycohydrolase activity (obsolete GO:0061810)","termid":"GO:0061810"}


id: PBO:0057157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302c","termid":"PBO:0057157"}


id: PBO:0051283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-22 (pseudogene)","termid":"PBO:0051283"}


id: GO:0042619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-hydroxybutyrate (PHB), a polymer of beta-hydroxybutyrate and a common storage material of prokaryotic cells.","definition_xrefs":["PMID:18640095","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-hydroxybutyrate metabolic process","termid":"GO:0042618"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-hydroxybutyrate biosynthetic process","synonyms":[{"name":"PHB biosynthesis","type":"exact"},{"name":"PHB biosynthetic process","type":"exact"},{"name":"poly-hydroxybutyrate anabolism","type":"exact"},{"name":"poly-hydroxybutyrate biosynthesis","type":"exact"},{"name":"poly-hydroxybutyrate formation","type":"exact"},{"name":"poly-hydroxybutyrate synthesis","type":"exact"}],"termid":"GO:0042619"}


id: PATO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decreased size quality inhering in a bearer by virtue of the bearer's exhibiting reduced number of cells within an organ or tissue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic","secondary_identifiers":["PATO:0000942"],"synonyms":[{"name":"hypoplasia","type":"exact"},{"name":"underdeveloped","type":"related"}],"termid":"PATO:0000645"}


id: FYPO:0003508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mercury ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on mercury","synonyms":[{"name":"normal cell population growth in presence of mercury","type":"exact"},{"name":"normal cell population growth on mercury","type":"exact"},{"name":"normal cell population growth on mercury ion","type":"exact"},{"name":"normal cellular response to mercury","type":"related"},{"name":"normal growth on mercury ions","type":"exact"},{"name":"normal vegetative cell population growth on mercury","type":"exact"}],"termid":"FYPO:0003508"}


id: PBO:0077602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11D","termid":"PBO:0077602"}


id: GO:0061788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Epidermal Growth Factor (EGF) repeats.","definition_xrefs":["GOC:25700513","PMID:25155514","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"EGF repeat binding","synonyms":[{"name":"Epidermal Growth Factor repeat binding","type":"related"},{"name":"Epidermal growth factor domain binding","type":"broad"}],"termid":"GO:0061788"}


id: PBO:0091670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal5h2","termid":"PBO:0091670"}


id: GO:2000522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of immunological synapse formation","termid":"GO:2000520"},{"relation_name":"positively_regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunological synapse formation","synonyms":[{"name":"positive regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000522"}


id: PBO:0047649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 2","termid":"PBO:0047649"}


id: PBO:0076420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 1","termid":"PBO:0076420"}


id: GO:0098913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ventricular cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"electrocardiogram QRS complex","type":"related"},{"name":"ventricular depolarization","type":"related"}],"termid":"GO:0098913"}


id: RO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x surrounded_by y if and only if (1) x is adjacent to y and for every region r that is adjacent to x, r overlaps y (2) the shared boundary between x and y occupies the majority of the outermost boundary of x","direct_ancestors":[{"relation_name":"is_a","term_name":"adjacent_to","termid":"RO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surrounded_by","termid":"RO:0002219"}


id: PBO:0054639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2044","termid":"PBO:0054639"}


id: PBO:0052047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 3","termid":"PBO:0052047"}


id: PBO:0059979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 24","termid":"PBO:0059979"}


id: GO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"positively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"positive regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"activation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"stimulation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"up regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"up-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"upregulation of Golgi vesicle fusion to target membrane","type":"exact"}],"termid":"GO:0048215"}


id: FYPO:0001305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of any long-chain fatty acid-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abnormal lcfa-ligase activity","type":"exact"}],"termid":"FYPO:0001305"}


id: PBO:0085637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in incorporating iron-sulfur clusters into proteins; mitochondrial matrix protein; involved in the incorporation of iron-sulfur clusters into mitochondrial aconitase-type proteins; activates the radical-SAM family members Bio2p and Lip5p; interacts with Ccr4p in the two-hybrid system","termid":"PBO:0085637"}


id: PBO:0049737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha pseudogene 1","termid":"PBO:0049737"}


id: SO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA_thermometer is a cis element in the 5' end of an mRNA that can change its secondary structure in response to temperature and coordinate temperature-dependent gene expression.","definition_xrefs":["PMID:22421878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_thermometer","secondary_identifiers":["https://en.wikipedia.org/wiki/RNA_thermometer"],"synonyms":[{"name":"RNA thermometer","type":"exact"},{"name":"RNA thermoregulator","type":"exact"},{"name":"RNAT","type":"exact"},{"name":"thermoregulator","type":"exact"}],"termid":"SO:0002168"}


id: PBO:0063330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 6","termid":"PBO:0063330"}


id: GO:0042541
data:
  {"annotated_genes":["SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91455],"is_not":false,"summary":null,"term":"GO:0042541"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"hemoglobin metabolic process","termid":"GO:0020027"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemoglobin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"haemoglobin biosynthesis","type":"exact"},{"name":"haemoglobin biosynthetic process","type":"exact"},{"name":"hemoglobin anabolism","type":"exact"},{"name":"hemoglobin biosynthesis","type":"exact"},{"name":"hemoglobin formation","type":"exact"},{"name":"hemoglobin synthesis","type":"exact"}],"termid":"GO:0042541","terms_by_termid":{"GO:0042541":null}}


id: PBO:0000886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase gamma subunit Ost3 (predicted)","termid":"PBO:0000886"}


id: PBO:0074249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 3","termid":"PBO:0074249"}


id: PBO:0069930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1223, pseudogene","termid":"PBO:0069930"}


id: GO:0010920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol phosphate biosynthetic process","termid":"GO:0010919"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"negative regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010920"}


id: GO:0022869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + lactose(out) = protein histidine + lactose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"lactose transmembrane transporter activity","termid":"GO:0015155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0005215","GO:0003674","GO:0022857","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity","synonyms":[{"name":"lactose PTS transporter activity","type":"exact"}],"termid":"GO:0022869"}


id: GO:0015790
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66189],"is_not":false,"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of UDP-xylose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"UDP-xylose transmembrane transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"UDP-xylose transport","type":"related"}],"termid":"GO:0015790","terms_by_termid":{"GO:0015790":null}}


id: PBO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-C (predicted)","termid":"PBO:0003288"}


id: FYPO:0007311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0002382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K16 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K16 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K16 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K16 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K16 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007311"}


id: GO:1901865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of capsorubin.","definition_xrefs":["GOC:yaf","MetaCyc:PWY-5174","GOC:TermGenie","UniPathway:UPA00807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"capsorubin metabolic process","termid":"GO:1901864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"capsorubin catabolic process","synonyms":[{"name":"capsorubin breakdown","type":"exact"},{"name":"capsorubin catabolism","type":"exact"},{"name":"capsorubin degradation","type":"exact"}],"termid":"GO:1901865"}


id: GO:0035469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the pancreas with respect to the left and right halves of the organism.","definition_xrefs":["GOC:dgh","PMID:12702646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of pancreatic left/right asymmetry","termid":"GO:0035469"}


id: PBO:0069997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1292, pseudogene","termid":"PBO:0069997"}


id: PBO:0005149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3 phosphoglycerate dehydrogenase (predicted)","termid":"PBO:0005149"}


id: PBO:0090226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S2","termid":"PBO:0090226"}


id: PBO:0076008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulator of interferon response cGAMP interactor 1","termid":"PBO:0076008"}


id: PR:Q10265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock cognate 71 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00951","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.02c","secondary_identifiers":["UniProtKB:Q10265"],"synonyms":[{"name":"Spom972h-HSPA8","type":"exact"}],"termid":"PR:Q10265"}


id: PBO:0053157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor","termid":"PBO:0053157"}


id: PBO:0082634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Dsc E3 ligase complex in vacuolar membranes; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; YIR014W is a non-essential gene","termid":"PBO:0082634"}


id: PBO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 18","termid":"PBO:0050240"}


id: PBO:0017783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase Pdx3 (predicted)","termid":"PBO:0017783"}


id: GO:0140732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of amphiregulin.","definition_xrefs":["PMID:24463227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of amphiregulin production","termid":"GO:0140731"},{"relation_name":"positively_regulates","term_name":"amphiregulin production","termid":"GO:0140730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amphiregulin production","synonyms":[{"name":"positive regulation of AREG production","type":"broad"}],"termid":"GO:0140732"}


id: PBO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family Glia Maturation Factor homolog Gmf1","termid":"PBO:0001291"}


id: GO:0031410
data:
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id: PBO:0059329
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id: SO:0000546
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id: MOD:01955
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id: PBO:0017986
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id: PBO:0082346
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id: GO:0003734
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id: GO:0071636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta production","secondary_identifiers":["GO:2001203"],"synonyms":[{"name":"positive regulation of TGF-B production","type":"exact"},{"name":"positive regulation of TGF-beta production","type":"exact"},{"name":"positive regulation of TGFB production","type":"exact"},{"name":"positive regulation of TGFbeta production","type":"exact"},{"name":"positive regulation of transforming growth factor-beta production","type":"exact"},{"name":"positive regulation of transforming growth factor-beta secretion","type":"narrow"}],"termid":"GO:0071636"}


id: PBO:0089864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP5 subunit Mod21","termid":"PBO:0089864"}


id: PBO:0062890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 2","termid":"PBO:0062890"}


id: GO:0072015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular visceral epithelial cell over time, from its formation to the mature structure. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte development","synonyms":[{"name":"glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:0072015"}


id: PBO:0090149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein Nab2","termid":"PBO:0090149"}


id: PBO:0055232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2659","termid":"PBO:0055232"}


id: PATO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Polyploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploid","termid":"PATO:0001377"}


id: PBO:0038735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7B","termid":"PBO:0038735"}


id: FYPO:0000999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the nucleus is larger than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"enlarged nucleus during nitrogen starvation","synonyms":[{"name":"enlarged nuclei during nitrogen starvation","type":"exact"},{"name":"enlarged nucleus during nitrogen depletion","type":"exact"},{"name":"enlarged nucleus during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000999"}


id: FYPO:0007189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sampangine. Cells stop growing (and may die) at a concentration of sampangine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sampangine","synonyms":[{"name":"hypersensitive to sampangine","type":"exact"},{"name":"sensitive to sampangine during mitotic cell cycle","type":"related"},{"name":"sensitive to sampangine during vegetative growth","type":"exact"}],"termid":"FYPO:0007189"}


id: GO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type I hypersensitivity","termid":"GO:0001810"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"negatively_regulates","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type I hypersensitivity","synonyms":[{"name":"down regulation of type I hypersensitivity","type":"exact"},{"name":"down-regulation of type I hypersensitivity","type":"exact"},{"name":"downregulation of type I hypersensitivity","type":"exact"},{"name":"inhibition of type I hypersensitivity","type":"narrow"}],"termid":"GO:0001811"}


id: GO:0070384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the Harderian gland over time, from its formation to the mature structure. The Harderian gland is an anterior orbital structure usually associated with the nictitating membrane, and produces and secretes a variety of substances to the eye, depending upon the species.","definition_xrefs":["PMID:16856596","GOC:hjd","PMID:7559104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Harderian gland development","termid":"GO:0070384"}


id: PBO:0081141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP41 zinc finger protein","termid":"PBO:0081141"}


id: PBO:0068690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 71, pseudogene","termid":"PBO:0068690"}


id: PBO:0086104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of cytochrome c oxidase; exists as an oligomer; described as both an integral mitochondrial inner membrane protein facing the intermembrane space (IMS) and as a soluble IMS protein; contains a twin Cx9C motif; imported into the IMS via the MIA import machinery","termid":"PBO:0086104"}


id: GO:1900960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 17-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"negatively_regulates","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900960"}


id: PBO:0041342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 49","termid":"PBO:0041342"}


id: PBO:0071459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32","termid":"PBO:0071459"}


id: GO:0005994
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"melibiose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"melibiose metabolism","type":"exact"}],"termid":"GO:0005994","terms_by_termid":{"GO:0005995":null}}


id: PR:O13998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An obg-like ATPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01661","PANTHER:PTHR23305:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obg-like ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.03c","secondary_identifiers":["UniProtKB:O13998"],"synonyms":[{"name":"Spom972h-OLA1","type":"exact"}],"termid":"PR:O13998"}


id: GO:0051546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a keratinocyte, epidermal cells which synthesize keratin, from one site to another.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte migration","termid":"GO:0051546"}


id: PBO:0055612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3051","termid":"PBO:0055612"}


id: PBO:0061682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP107 divergent transcript","termid":"PBO:0061682"}


id: PBO:0061868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory marker protein","termid":"PBO:0061868"}


id: PBO:0002994
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.77","termid":"PBO:0002994"}


id: PBO:0090154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1","termid":"PBO:0090154"}


id: FYPO:0001538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of potassium ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular potassium level","synonyms":[{"name":"normal cellular potassium accumulation","type":"related"},{"name":"normal cellular potassium ion level","type":"exact"},{"name":"normal cellular potassium level during mitotic cell cycle","type":"related"},{"name":"normal cellular potassium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001538"}


id: PBO:0090195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi zinc importer, CDF family, Zrg17","termid":"PBO:0090195"}


id: GO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of biotic stimulus","secondary_identifiers":["GO:0009596"],"synonyms":[{"name":"perception of biotic stimulus","type":"related"}],"termid":"GO:0009595"}


id: PBO:0075608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondin 2","termid":"PBO:0075608"}


id: GO:0062236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an ionocyte. Ionocytes are specialized epithelial cells that contribute to osmotic homeostasis.","definition_xrefs":["PMID:17555741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ionocyte differentiation","termid":"GO:0062236"}


id: PBO:0087260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0087260"}


id: PBO:0046738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 1","termid":"PBO:0046738"}


id: GO:0006809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular nitrogen compound biosynthetic process","termid":"GO:0044271"},{"relation_name":"is_a","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide biosynthetic process","synonyms":[{"name":"nitric oxide anabolism","type":"exact"},{"name":"nitric oxide biosynthesis","type":"exact"},{"name":"nitric oxide formation","type":"exact"},{"name":"nitric oxide synthesis","type":"exact"}],"termid":"GO:0006809"}


id: PBO:0028162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP_binding","termid":"PBO:0028162"}


id: GO:0033896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of poly(U) or poly(C) to fragments terminated by 3'-hydroxy and 5'-phosphate groups.","definition_xrefs":["EC:3.1.26.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"ribonuclease IX activity","secondary_identifiers":["MetaCyc:3.1.26.10-RXN"],"synonyms":[{"name":"poly(U)- and poly(C)-specific endoribonuclease activity","type":"related"}],"termid":"GO:0033896"}


id: PBO:0079518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase pseudogene 2","termid":"PBO:0079518"}


id: GO:0018894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern.","definition_xrefs":["UM-BBD_pathwayID:dpd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dibenzo-p-dioxin metabolic process","synonyms":[{"name":"dibenzo-p-dioxin metabolism","type":"exact"},{"name":"oxanthrene metabolic process","type":"exact"},{"name":"oxanthrene metabolism","type":"exact"},{"name":"phenodioxin metabolic process","type":"exact"},{"name":"phenodioxin metabolism","type":"exact"}],"termid":"GO:0018894"}


id: GO:0075504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of macropinosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus in a macropinosome, and results in release of the viral contents from the macropinosome into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeabilization of host organelle membrane involved in viral entry into host cell","termid":"GO:0039665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macropinosomal membrane permeabilization involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via macropinocytosis followed by macropinosomal membrane permeabilization","type":"related"}],"termid":"GO:0075504"}


id: GO:0006251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCDP metabolic process","termid":"GO:0046062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"dCDP catabolic process","synonyms":[{"name":"dCDP breakdown","type":"exact"},{"name":"dCDP catabolism","type":"exact"},{"name":"dCDP degradation","type":"exact"}],"termid":"GO:0006251"}


id: PBO:0080768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XIRP2 antisense RNA 1","termid":"PBO:0080768"}


id: PBO:0043875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 3","termid":"PBO:0043875"}


id: FYPO:0002317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of squalene measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular squalene level","synonyms":[{"name":"increased cellular squalene level during mitotic cell cycle","type":"related"},{"name":"increased cellular squalene level during vegetative growth","type":"exact"},{"name":"increased squalene accumulation","type":"related"}],"termid":"FYPO:0002317"}


id: GO:2000479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of AMPK","type":"related"},{"name":"regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"regulation of PKA","type":"related"},{"name":"regulation of PKA C","type":"related"},{"name":"regulation of STK22","type":"related"},{"name":"regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000479"}


id: PBO:0048136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 autosomal homolog 2","termid":"PBO:0048136"}


id: PBO:0088981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L43","termid":"PBO:0088981"}


id: GO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph","PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060781"}


id: PBO:0088642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum EF hand protein","termid":"PBO:0088642"}


id: PBO:0031185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_thiamine_level","termid":"PBO:0031185"}


id: PR:Q92373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication protein A 32 kDa subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04720","PANTHER:PTHR13989:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor A protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.01c","secondary_identifiers":["UniProtKB:Q92373"],"synonyms":[{"name":"Spom972h-RPA2","type":"exact"},{"name":"single-stranded DNA-binding protein P30 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92373"}


id: GO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the generation of sequence diversity of the FREP-based immune receptors of snails.","definition_xrefs":["GOC:add","PMID:16102575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of FREP-based immune receptors","termid":"GO:0002567"}


id: FYPO:0002532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm","type":"exact"}],"termid":"FYPO:0002532"}


id: PBO:0091263
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"until Jan-28-2019 this was erroneously annotated as mrpl1602","termid":"PBO:0091263"}


id: PBO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor (predicted)","termid":"PBO:0002206"}


id: PBO:0052659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 27","termid":"PBO:0052659"}


id: PBO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP3 regulating long intergenic non-coding RNA","termid":"PBO:0047675"}


id: GO:0006248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CMP, cytidine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CMP metabolic process","termid":"GO:0046035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086","GO:0044248"],"is_obsolete":false,"name":"CMP catabolic process","synonyms":[{"name":"CMP breakdown","type":"exact"},{"name":"CMP catabolism","type":"exact"},{"name":"CMP degradation","type":"exact"}],"termid":"GO:0006248"}


id: PBO:0053136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 3","termid":"PBO:0053136"}


id: PBO:0077188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 12, pseudogene","termid":"PBO:0077188"}


id: PBO:0039509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 29","termid":"PBO:0039509"}


id: PBO:0073066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 4","termid":"PBO:0073066"}


id: PBO:0058632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6764","termid":"PBO:0058632"}


id: GO:1902944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any aspartic-type endopeptidase activity that is involved in amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","GOC:sjp","PMID:10206644","PMID:24577224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartic-type endopeptidase activity","termid":"GO:0004190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"}],"termid":"GO:1902944"}


id: PBO:0070529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 28","termid":"PBO:0070529"}


id: GO:0020026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron-dense organelle with a granular internal matrix found throughout the merozoite life cycle stage of apicomplexan parasites; contains proteins destined to be secreted into the parasitophorous vacuole following parasite invasion of a host cell.","definition_xrefs":["GOC:mb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"merozoite dense granule","synonyms":[{"name":"dense body","type":"related"}],"termid":"GO:0020026"}


id: PBO:0031904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Tor1","termid":"PBO:0031904"}


id: PBO:0041483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 96","termid":"PBO:0041483"}


id: SO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An EST read from the 5' end of a transcript that usually codes for a protein. These regions tend to be conserved across species and do not change much within a gene family.","direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_EST","synonyms":[{"name":"5' EST","type":"exact"},{"name":"five prime EST","type":"exact"}],"termid":"SO:0001208"}


id: GO:0035434
data:
  {"annotated_genes":["SJAG_01493","SJAG_01119","SJAG_02399","SJAG_03079","SJAG_04743","SJAG_04246","SJAG_00547"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62034,66303,99626,100465],"is_not":false,"summary":null,"term":"GO:0035434"},{"annotations":[103762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[110649,83409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[97271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"}]},"cv_name":"biological_process","definition":"The directed movement of copper cation across a membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_02399":null,"SJAG_03079":null,"SJAG_04246":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"copper ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1901473"],"synonyms":[{"name":"copper cation transmembrane transport","type":"exact"},{"name":"copper ion membrane transport","type":"exact"}],"termid":"GO:0035434","terms_by_termid":{"GO:0035434":null,"GO:0060003":null,"GO:0097430":null,"GO:0098705":null}}


id: GO:0048256
data:
  {"annotated_genes":["SJAG_01648","SJAG_03994","SJAG_05237","SJAG_01044","SJAG_01173","SJAG_04183","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[92826,99014,96957,83878,100001,103664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01044":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140097","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"flap endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048256","terms_by_termid":{"GO:0017108":null,"GO:0048257":null}}


id: PATO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000816 relative odor acuity value (obsolete PATO:0000816)","termid":"PATO:0000816"}


id: PBO:0035764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_heterochromatin_assembly_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035764"}


id: PBO:0045713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 1","termid":"PBO:0045713"}


id: PBO:0091862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog","termid":"PBO:0091862"}


id: PBO:0028866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mRNA_level_during_vegetative_growth","termid":"PBO:0028866"}


id: PBO:0017884
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FPR1","termid":"PBO:0017884"}


id: GO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle, embryonic","termid":"GO:0045977"},{"relation_name":"positively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"activation of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"positive regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"stimulation of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"up regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"up-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"upregulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046002"}


id: RO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps y if and only if there exists some z such that x has part z and z part of y","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps","termid":"RO:0002131"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: PBO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in the current viewer tco1 gene is hidden behind SPNCRNA.600","termid":"PBO:0002126"}


id: PBO:0043362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 3","termid":"PBO:0043362"}


id: GO:0070611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 2) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 2). This reaction is the addition of a methyl group to the arginine residue at position 2 of histone H3.","definition_xrefs":["GOC:mah","PMID:17898714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"histone H3R2 methyltransferase activity","synonyms":[{"name":"histone H3R2 arginine methyltransferase activity","type":"exact"},{"name":"histone methylase activity (H3-R2 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-R2 specific)","type":"exact"},{"name":"histone-H3R2 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H3-R2 specific)","type":"exact"}],"termid":"GO:0070611"}


id: PBO:0029638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_ubiquitination","termid":"PBO:0029638"}


id: GO:0032260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus received in the context of the jasmonic acid- and ethylene (ethene)-dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to jasmonic acid","termid":"GO:0009753"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance","type":"related"}],"termid":"GO:0032260"}


id: GO:0004791
data:
  {"annotated_genes":["SJAG_04399","SJAG_03653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77768,106036],"is_not":false,"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thioredoxin-dithiol + NADP+ = thioredoxin-disulfide + H+ + NADPH.","definition_xrefs":["RHEA:20345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"protein-disulfide reductase (NAD(P)) activity","termid":"GO:0047134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03653":null,"SJAG_04399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0015036","GO:0016491","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"thioredoxin-disulfide reductase (NADP) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3323050","Reactome:R-HSA-1222485","Reactome:R-HSA-73646","KEGG_REACTION:R02016","Reactome:R-HSA-9617735","MetaCyc:THIOREDOXIN-REDUCT-NADPH-RXN","EC:1.8.1.9"],"synonyms":[{"name":"NADPH:oxidized thioredoxin oxidoreductase activity","type":"exact"},{"name":"thioredoxin disulfide reductase activity","type":"broad"},{"name":"thioredoxin reductase (NADPH) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase activity","type":"broad"},{"name":"thioredoxin-disulphide reductase activity","type":"broad"}],"termid":"GO:0004791","terms_by_termid":{"GO:0004791":null}}


id: GO:0150105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained, in a location within a cell-cell junction.","definition_xrefs":["PMID:26706435","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell junction","termid":"GO:1902414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell-cell junction","termid":"GO:0150105"}


id: PBO:0066389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ like helicase 5","termid":"PBO:0066389"}


id: GO:0097339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycolate is transported across a membrane. Glycolate is the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["PMID:11785976","GOC:am","PMID:11283302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolate transport","termid":"GO:1900866"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glycolate transmembrane transport","synonyms":[{"name":"glycolate membrane transport","type":"exact"}],"termid":"GO:0097339"}


id: PBO:0050938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 8","termid":"PBO:0050938"}


id: PBO:0079504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 2","termid":"PBO:0079504"}


id: PBO:0082399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of succinyl-CoA ligase; succinyl-CoA ligase is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate","termid":"PBO:0082399"}


id: PBO:0073059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1 pseudogene 1","termid":"PBO:0073059"}


id: GO:0045439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopenicillin N = penicillin N.","definition_xrefs":["EC:5.1.1.17","RHEA:20033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"isopenicillin-N epimerase activity","secondary_identifiers":["MetaCyc:5.1.1.17-RXN","KEGG_REACTION:R04147"],"synonyms":[{"name":"isopenicillin N epimerase activity","type":"exact"},{"name":"penicillin-N 5-amino-5-carboxypentanoyl-epimerase activity","type":"related"}],"termid":"GO:0045439"}


id: PBO:0061860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 1","termid":"PBO:0061860"}


id: GO:0046279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3,4-dihydroxybenzoate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"3,4-dihydroxybenzoate metabolic process","termid":"GO:0046278"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3,4-dihydroxybenzoate biosynthetic process","synonyms":[{"name":"protocatechuate anabolism","type":"exact"},{"name":"protocatechuate biosynthesis","type":"exact"},{"name":"protocatechuate biosynthetic process","type":"exact"},{"name":"protocatechuate formation","type":"exact"},{"name":"protocatechuate synthesis","type":"exact"}],"termid":"GO:0046279"}


id: GO:0048674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in reformation of a growth cone by the tip of an injured axon, or in collateral sprouting of the axon. Collateral sprouting is the process in which outgrowths develop from the shafts of existing axons.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:lm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"},{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of injured axon","termid":"GO:0048674"}


id: FYPO:0000578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gene silencing is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal gene silencing","synonyms":[{"name":"normal gene silencing during mitotic cell cycle","type":"related"},{"name":"normal gene silencing during vegetative growth","type":"exact"},{"name":"silencing: normal","type":"related"}],"termid":"FYPO:0000578"}


id: PBO:0063309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 3","termid":"PBO:0063309"}


id: PBO:0067526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 670, pseudogene","termid":"PBO:0067526"}


id: PBO:0073774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 8","termid":"PBO:0073774"}


id: GO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the breakdown of ethanolamine to form acetaldehyde and ammonia.","definition_xrefs":["PMID:1550360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase complex","termid":"GO:0009350"}


id: PR:Q9UT79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msc1 gene.","definition_xrefs":["UniProtKB:Q9UT79","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicopy suppressor of chk1 protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.11c","synonyms":[{"name":"Spom972h-msc1","type":"exact"}],"termid":"PR:Q9UT79"}


id: PBO:0061833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 1 pseudogene 1","termid":"PBO:0061833"}


id: GO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an angiotensin-mediated signaling system present in the brain regulates the force with which blood passes through the circulatory system.","definition_xrefs":["PMID:2909574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain renin-angiotensin system","termid":"GO:0002035"}


id: GO:0033520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"phytol metabolic process","termid":"GO:0033306"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phytol biosynthetic process","synonyms":[{"name":"phytol anabolism","type":"exact"},{"name":"phytol biosynthesis","type":"exact"},{"name":"phytol formation","type":"exact"},{"name":"phytol synthesis","type":"exact"}],"termid":"GO:0033520"}


id: PBO:0054297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1688","termid":"PBO:0054297"}


id: GO:0030981
data:
  {"annotated_genes":["SJAG_00140","SJAG_00113","SJAG_01370","SJAG_02561","SJAG_02045","SJAG_02286","SJAG_01297","SJAG_01224","SJAG_02336","SJAG_01613","SJAG_03073","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83215,86517,93282,107362],"is_not":false,"summary":null,"term":"GO:0030981"},{"annotations":[104160,86906,94954,97202,94348,99719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0055028"},{"annotations":[90866,93283,99577],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[86520],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032117"}]},"cv_name":"cellular_component","definition":"The portion of the microtubule cytoskeleton that lies just beneath the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00851":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02561":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"cortical microtubule cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030981","terms_by_termid":{"GO:0030981":null,"GO:0032117":null,"GO:0055028":null,"GO:1903754":null}}


id: GO:0008670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-2,3-didehydroacyl-CoA + NADP+ = trans,trans-2,3,4,5-tetradehydroacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.3.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,4-dienoyl-CoA reductase (NADPH) activity","secondary_identifiers":["RHEA:12136","MetaCyc:DIENOYLCOAREDUCT-RXN"],"synonyms":[{"name":"4-enoyl coenzyme A (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"4-enoyl-CoA reductase (NADPH) activity","type":"related"},{"name":"4-enoyl-CoA reductase (NADPH2)","type":"related"},{"name":"4-enoyl-CoA reductase activity","type":"related"},{"name":"trans-2,3-didehydroacyl-CoA:NADP+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0008670"}


id: MOD:01835
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfone","termid":"MOD:00256"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfone","termid":"MOD:01835"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: GO:2000464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"is_a","term_name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"},{"relation_name":"positively_regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of astrocyte chemotaxis","termid":"GO:2000464"}


id: PBO:0055196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2621","termid":"PBO:0055196"}


id: PBO:0031092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_at_high_temperature","termid":"PBO:0031092"}


id: PBO:0060668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudE neurodevelopment protein 1 pseudogene 1","termid":"PBO:0060668"}


id: FYPO:0000669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a peptidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished peptidase activity","synonyms":[{"name":"abolished protease activity","type":"exact"},{"name":"peptidase activity abolished","type":"exact"}],"termid":"FYPO:0000669"}


id: PATO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the stalk of an organism relative to another entity.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/cauline"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauline to","termid":"PATO:0002350"}


id: PBO:0031217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_replication","termid":"PBO:0031217"}


id: GO:2000062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"negatively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ureter smooth muscle cell differentiation","termid":"GO:2000062"}


id: FYPO:0006787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}


id: GO:0046852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone remodeling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"positively_regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone remodeling","synonyms":[{"name":"positive regulation of bone remodelling","type":"exact"},{"name":"activation of bone remodeling","type":"narrow"},{"name":"stimulation of bone remodeling","type":"narrow"},{"name":"up regulation of bone remodeling","type":"exact"},{"name":"up-regulation of bone remodeling","type":"exact"},{"name":"upregulation of bone remodeling","type":"exact"}],"termid":"GO:0046852"}


id: GO:1904903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an ESCRT III complex into its constituent components.","definition_xrefs":["PMID:20588296","GOC:pad","GO_REF:0000079","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex disassembly","termid":"GO:1904896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ESCRT III complex disassembly","termid":"GO:1904903"}


id: GO:0002784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"is_a","term_name":"regulation of antimicrobial humoral response","termid":"GO:0002759"},{"relation_name":"regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antimicrobial peptide production","termid":"GO:0002784"}


id: PBO:0054391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1787","termid":"PBO:0054391"}


id: GO:0033444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"AAG codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033444"}


id: GO:0008281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with sulfonylurea, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"sulfonylurea receptor activity","synonyms":[{"name":"sulphonylurea receptor activity","type":"exact"}],"termid":"GO:0008281"}


id: PBO:0035816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_acetaldehyde","termid":"PBO:0035816"}


id: GO:1902112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diethyl maleate stimulus.","definition_xrefs":["PMID:12100563","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to diethyl maleate","termid":"GO:1902111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diethyl maleate","termid":"GO:1902112"}


id: GO:0033736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + H2O + O2 = allysine + H2O2 + NH4.","definition_xrefs":["RHEA:22548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-lysine 6-oxidase activity","secondary_identifiers":["EC:1.4.3.20","KEGG_REACTION:R07598","MetaCyc:1.4.3.20-RXN"],"synonyms":[{"name":"L-lysine-epsilon-oxidase activity","type":"related"},{"name":"L-lysine:oxygen 6-oxidoreductase (deaminating) activity","type":"related"},{"name":"Lod","type":"related"},{"name":"LodA","type":"related"},{"name":"marinocine","type":"related"}],"termid":"GO:0033736"}


id: PBO:0061591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophic receptor tyrosine kinase 2","termid":"PBO:0061591"}


id: PBO:0089913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 Pep3/Vps18","termid":"PBO:0089913"}


id: PBO:0017493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo/keto reductase, predicted calcium channel regulator","termid":"PBO:0017493"}


id: PBO:0059381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 6","termid":"PBO:0059381"}


id: PBO:0038428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,3-galactosyltransferase 2","termid":"PBO:0038428"}


id: PBO:0005585
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YBR194W","termid":"PBO:0005585"}


id: PBO:0000826
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.8","termid":"PBO:0000826"}


id: PBO:0003939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1 (predicted)","termid":"PBO:0003939"}


id: FYPO:0004225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of nucleosome binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal nucleosome binding","termid":"FYPO:0004225"}


id: FYPO:0001421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein processing","termid":"FYPO:0006374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0002274","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein processing during vegetative growth","synonyms":[{"name":"abnormal protein cleavage during vegetative growth","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"abnormal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001421"}


id: GO:0000834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = 5,6-bisdiphosphoinositol-1D-myoinositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:16429326","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol heptakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"inositol heptakisphosphate 6-kinase activity","termid":"GO:0000834"}


id: PR:O94339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug96 gene.","definition_xrefs":["UniProtKB:O94339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 96 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.06c","synonyms":[{"name":"Spom972h-mug96","type":"exact"}],"termid":"PR:O94339"}


id: PBO:0028547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_copper_ion_starvation","termid":"PBO:0028547"}


id: FYPO:0002847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the proteasome is lower than normal.","definition_xrefs":["PMID:22906049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level in proteasome","synonyms":[{"name":"decreased proteasomal protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in proteasome during mitotic cell cycle","type":"related"},{"name":"decreased protein level in proteasome during vegetative growth","type":"exact"},{"name":"reduced protein level in proteasome","type":"exact"}],"termid":"FYPO:0002847"}


id: PBO:0042358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD101 molecule","termid":"PBO:0042358"}


id: GO:1902337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["PMID:12202035","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"regulation of apoptosis involved in development","type":"related"},{"name":"regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"regulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902337"}


id: MOD:01658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form an alpha-amino-Dabsyl-derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dabsyl derivatized residue","synonyms":[{"name":"N2DabsylRes","type":"exact"}],"termid":"MOD:01658"}


id: PBO:0068046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 351","termid":"PBO:0068046"}


id: PR:P40380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rum1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase inhibitor rum1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.09","synonyms":[{"name":"Spom972h-rum1","type":"exact"},{"name":"p25-rum1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40380"}


id: PBO:0074885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63","termid":"PBO:0074885"}


id: GO:0043304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of mast cell degranulation","synonyms":[{"name":"regulation of mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043304"}


id: GO:1990412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hercynylselenocysteine + 2H+ = selenoneine + pyruvate + ammonium.","definition_xrefs":["PMID:24828577"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylselenocysteine lyase activity (selenoneine-forming) (obsolete GO:1990412)","termid":"GO:1990412"}


id: GO:0044587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellopentaose, an oligosaccharide consisting of four glucose residues resulting from hydrolysis of cellulose.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellopentaose binding","termid":"GO:0044587"}


id: GO:0048023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of the chemical reactions and pathways resulting in the formation of melanin.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of melanin biosynthetic process","termid":"GO:0048021"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"melanin biosynthetic process","termid":"GO:0042438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanin biosynthetic process","synonyms":[{"name":"activation of melanin biosynthetic process","type":"narrow"},{"name":"positive regulation of melanin anabolism","type":"exact"},{"name":"positive regulation of melanin biosynthesis","type":"exact"},{"name":"positive regulation of melanin formation","type":"exact"},{"name":"positive regulation of melanin synthesis","type":"exact"},{"name":"stimulation of melanin biosynthetic process","type":"narrow"},{"name":"up regulation of melanin biosynthetic process","type":"exact"},{"name":"up-regulation of melanin biosynthetic process","type":"exact"},{"name":"upregulation of melanin biosynthetic process","type":"exact"}],"termid":"GO:0048023"}


id: PBO:0078374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase pseudogene 1","termid":"PBO:0078374"}


id: GO:1990891
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112770],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatid arms are physically detached from each other during mitosis.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990891","terms_by_termid":{"GO:1905824":null}}


id: PBO:0050453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 1","termid":"PBO:0050453"}


id: GO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+-)-trans-acenaphthene-1,2-diol + 2 NADP+ = acenaphthene-1,2-dione + 2 H+ + 2 NADPH.","definition_xrefs":["RHEA:22184","EC:1.10.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","termid":"GO:0016680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"trans-acenaphthene-1,2-diol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04059","MetaCyc:1.10.1.1-RXN"],"synonyms":[{"name":"(+-)-trans-acenaphthene-1,2-diol:NADP+ oxidoreductase activity","type":"related"},{"name":"trans-1,2-acenaphthenediol dehydrogenase activity","type":"related"}],"termid":"GO:0047062"}


id: GO:0045758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin polymerization and/or depolymerization (obsolete GO:0045758)","synonyms":[{"name":"positive regulation of actin polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045758"}


id: GO:1905424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:PARL","PMID:17244647","GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905424)","synonyms":[{"name":"regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of midbrain dopaminergic neuron differentiation by regulation of Wnt signaling","type":"related"}],"termid":"GO:1905424"}


id: GO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a nurse cell. During late oogenesis, following the transfer of substances from the nurse cells to the oocyte, nurse cell remnants are cleared from the egg chamber by apoptotic process.","definition_xrefs":["CL:0000026","PMID:11973306","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nurse cell apoptotic process","synonyms":[{"name":"apoptosis of nurse cells","type":"exact"},{"name":"invertebrate nurse cell apoptosis","type":"narrow"},{"name":"nurse cell apoptosis","type":"narrow"},{"name":"nurse cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of nurse cells by apoptosis","type":"exact"}],"termid":"GO:0045476"}


id: PBO:0061344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 2","termid":"PBO:0061344"}


id: PBO:0045310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 like","termid":"PBO:0045310"}


id: PBO:0053278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B4","termid":"PBO:0053278"}


id: PBO:0038364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_regulated_by","termid":"PBO:0038364"}


id: PBO:0070379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 1","termid":"PBO:0070379"}


id: PBO:0041406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 132","termid":"PBO:0041406"}


id: RO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and m when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that crosses m.","direct_ancestors":[{"relation_name":"is_a","term_name":"occurs_across","termid":"RO:0002021"},{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_across","termid":"RO:0002342"}


id: PBO:0054259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1644","termid":"PBO:0054259"}


id: GO:0035124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the caudal fin are generated and organized. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"caudal fin morphogenesis","termid":"GO:0035143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic caudal fin morphogenesis","termid":"GO:0035124"}


id: MOD:00891
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-serine.","definition_xrefs":["ChEBI:29998","PubMed:6893271","PubMed:7973665","RESID:AA0195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser","type":"exact"},{"name":"D-serine","type":"exact"}],"termid":"MOD:00891"}


id: PBO:0075179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 9","termid":"PBO:0075179"}


id: PBO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine family transporter (predicted)","termid":"PBO:0003290"}


id: PBO:0090667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mmm1","termid":"PBO:0090667"}


id: GO:0102333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + 3 H+ + a stearoyl-[acp] = nonadec-1-ene + 2 carbon dioxide + coenzyme A + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"stearoyl-[acp] elongase/decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-13261"],"termid":"GO:0102333"}


id: GO:0061336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shape change of an epithelial cell from a columnar to squamous cell morphology that contributes to the shaping of the Malpighian tubule.","definition_xrefs":["PMID:19783135","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis involved in Malpighian tubule morphogenesis","termid":"GO:0061336"}


id: PBO:0055122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2541","termid":"PBO:0055122"}


id: GO:0034497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the phagophore assembly site (PAS).","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006914","GO:0044248","GO:0051179"],"is_obsolete":false,"name":"protein localization to phagophore assembly site","synonyms":[{"name":"protein localisation to phagophore assembly site","type":"exact"},{"name":"protein localization to PAS","type":"exact"},{"name":"protein localization to pre-autophagosomal structure","type":"narrow"}],"termid":"GO:0034497"}


id: PR:Q9USK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cbp3 gene.","definition_xrefs":["UniProtKB:Q9USK6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBP3-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.17","synonyms":[{"name":"Spom972h-cbp3","type":"exact"}],"termid":"PR:Q9USK6"}


id: PBO:0086389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative channel-like protein; similar to Fps1p; mediates passive diffusion of glycerol in the presence of ethanol","termid":"PBO:0086389"}


id: PBO:0054012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1342","termid":"PBO:0054012"}


id: GO:0039659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of the host TBK1-IKBKE-DDX3 complex.","definition_xrefs":["VZ:719"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host TBK1-IKBKE-DDX3 complex activity (obsolete GO:0039659)","synonyms":[{"name":"inhibition of host TBK1-IKBKE-DDX3 complex by virus","type":"exact"},{"name":"suppression by virus of host TBK1-IKKE-DDX3 complex activity","type":"exact"}],"termid":"GO:0039659"}


id: GO:0034973
data:
  {"annotated_genes":["SJAG_04597","SJAG_03936"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90043,106467],"is_not":false,"summary":null,"term":"GO:0034973"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a protein kinase (Sid2 in S. pombe) and its regulatory subunit (Mob1). The Sid2p-Mob1p kinase complex is a component of the septation initiation network in fission yeast (called the mitotic exit network in S. cerevisiae) and is required for cytokinesis. The analogous complex in S. cerevisiae is called Dbf2p-Mob1p complex.","definition_xrefs":["PMID:10837231","GOC:vw","PMID:15060149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03936":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Sid2-Mob1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dbf2p-Mob1p complex","type":"exact"},{"name":"Sid2-Mob1 kinase complex","type":"exact"},{"name":"Sid2p-Mob1p complex","type":"exact"}],"termid":"GO:0034973","terms_by_termid":{"GO:0034973":null}}


id: PATO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotational curvature","termid":"PATO:0001787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral and rotional curvature","termid":"PATO:0002049"}


id: PBO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 8","termid":"PBO:0043729"}


id: GO:0003857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+.","definition_xrefs":["EC:1.1.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:OHACYL-COA-DEHYDROG-RXN","Reactome:R-HSA-6809264","Reactome:R-HSA-77312","Reactome:R-HSA-77323","Reactome:R-HSA-77331","Reactome:R-HSA-77303","Reactome:R-HSA-390251","Reactome:R-HSA-77342","Reactome:R-HSA-193508","Reactome:R-HSA-389995","Reactome:R-HSA-77283","Reactome:R-HSA-70837","Reactome:R-HSA-193455","Reactome:R-HSA-508369","Reactome:R-HSA-77254","UM-BBD_enzymeID:e0664","RHEA:22432"],"synonyms":[{"name":"3-oxoacyl-thioester reductase activity","type":"related"},{"name":"L-3-hydroxyacyl CoA dehydrogenase activity","type":"related"},{"name":"L-3-hydroxyacyl coenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxyacyl dehydrogenase activity","type":"related"},{"name":"beta-hydroxyacyl-coenzyme A synthetase activity","type":"related"},{"name":"beta-hydroxyacylcoenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyrylcoenzyme A dehydrogenase activity","type":"narrow"},{"name":"beta-keto-reductase activity","type":"related"},{"name":"beta-ketoacyl-CoA reductase","type":"broad"}],"termid":"GO:0003857"}


id: PBO:0044724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 11 (pseudogene)","termid":"PBO:0044724"}


id: PBO:0051112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-68 (pseudogene)","termid":"PBO:0051112"}


id: PBO:0029657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0029657"}


id: GO:0098588
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id: PBO:0058943
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 2","termid":"PBO:0058943"}


id: MOD:02063
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an D-phenylalanine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-phenylalanine","termid":"MOD:00201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked D-phenylalanine residue","synonyms":[{"name":"XlnkDPhe","type":"exact"}],"termid":"MOD:02063"}


id: GO:0140282
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + lipid II + ATP + H2O = L-glutamate + beta-D-GlcNAc(1->4)-Mur2Ac(oyl-L-Ala-D-isoGln-L-Lys-D-Ala-D-Ala)-diphospho-di-trans,octa-cis-undecaprenol + ADP + phosphate.","definition_xrefs":["PMID:22291598","PMID:30093673","RHEA:57928","PMID:30154570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"carbon-nitrogen ligase activity on lipid II","secondary_identifiers":["EC:6.3.5.13"],"synonyms":[{"name":"L-glutamate--lipid II transaminase activity","type":"exact"},{"name":"undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl pentapeptide amidotransferase (glutamine-hydrolyzing) activity","type":"exact"}],"termid":"GO:0140282"}


id: GO:0071629
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  {"annotated_genes":["SJAG_01556","SJAG_02341","SJAG_02419","SJAG_00552","SJAG_00173"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103917,105580,105684,106273,109661],"is_not":false,"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["GOC:mah","GOC:rb","PMID:20080635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"},{"relation_name":"is_a","term_name":"cytoplasm protein quality control","termid":"GO:0140455"},{"relation_name":"part_of","term_name":"cellular response to misfolded protein","termid":"GO:0071218"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"cytoplasm protein quality control by the ubiquitin-proteasome system","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome","type":"exact"}],"termid":"GO:0071629","terms_by_termid":{"GO:0071629":null}}


id: PR:O74648
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoamyl acetate-hydrolyzing esterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04955","PANTHER:PTHR14209:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate-hydrolyzing esterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.10","secondary_identifiers":["UniProtKB:O74648"],"synonyms":[{"name":"Spom972h-IAH1","type":"exact"}],"termid":"PR:O74648"}


id: GO:0002130
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  {"annotated_genes":["SJAG_02352","SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93567,98698],"is_not":false,"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The process in which the ribose base of the nucleotide at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA nucleoside ribose methylation","termid":"GO:0002128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_02352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"wobble position ribose methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002130","terms_by_termid":{"GO:0002130":null}}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: PBO:0078653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (CTT) 6-1","termid":"PBO:0078653"}


id: PBO:0082189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol dehydrogenase isoenzyme V; involved in ethanol production; ADH5 has a paralog, ADH1, that arose from the whole genome duplication","termid":"PBO:0082189"}


id: FYPO:0007323
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PMID:32071154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal stress granule assembly during vegetative growth","termid":"FYPO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal stress granule assembly during cellular response to heat","synonyms":[{"name":"normal cytoplasmic stress granule assembly during cellular response to heat","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal stress granule assembly during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat stress","type":"exact"},{"name":"normal stress granule formation during cellular response to heat","type":"exact"}],"termid":"FYPO:0007323"}


id: GO:0102563
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aurachin C + O2 + H+ + NAD(P)H = aurachin C epoxide + H2O + NAD(P).","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aurachin C monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-15029"],"termid":"GO:0102563"}


id: GO:0021938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in cerebellar granule cells that contributes to the regulation of proliferation of the cells.","definition_xrefs":["PMID:15157725","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation","termid":"GO:0021937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of granule cell precursor cell proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of granule cell precursor cell proliferation","type":"exact"},{"name":"smoothened signalling pathway in regulation of granule cell precursor cell proliferation","type":"exact"}],"termid":"GO:0021938"}


id: GO:0010896
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.","definition_xrefs":["GOC:tb","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of triglyceride metabolic process","termid":"GO:0090207"},{"relation_name":"regulates","term_name":"triglyceride catabolic process","termid":"GO:0019433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of triglyceride catabolic process","synonyms":[{"name":"regulation of triacylglycerol catabolic process","type":"exact"}],"termid":"GO:0010896"}


id: GO:1901213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901213)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901213"}


id: PBO:0065815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A, member RAS oncogene family","termid":"PBO:0065815"}


id: PBO:0089978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Pob3","termid":"PBO:0089978"}


id: PBO:0066667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR3 antisense RNA 1","termid":"PBO:0066667"}


id: GO:1900043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any leptin-mediated signaling pathway that is involved in negative regulation of appetite.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete leptin-mediated signaling pathway involved in negative regulation of appetite (obsolete GO:1900043)","synonyms":[{"name":"adipocytokine signaling pathway of appetite suppression","type":"related"},{"name":"adipocytokine signaling pathway of down regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of down-regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of downregulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of inhibition of appetite","type":"related"},{"name":"adipocytokine signaling pathway of negative regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of negative regulation of hunger","type":"related"},{"name":"leptin-mediated signaling pathway involved in negative regulation of appetite","type":"exact"},{"name":"leptin-mediated signaling pathway of appetite suppression","type":"related"},{"name":"leptin-mediated signaling pathway of down regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of down-regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of downregulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of inhibition of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of negative regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of negative regulation of hunger","type":"related"},{"name":"leptin-mediated signalling pathway of appetite suppression","type":"related"},{"name":"leptin-mediated signalling pathway of down regulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of down-regulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of downregulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of inhibition of appetite","type":"narrow"},{"name":"leptin-mediated signalling pathway of negative regulation of appetite","type":"related"},{"name":"leptin-mediated signalling pathway of negative regulation of hunger","type":"related"}],"termid":"GO:1900043"}


id: RO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partner_in","termid":"RO:0002461"}


id: PBO:0012284
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparant orthologs","termid":"PBO:0012284"}


id: PBO:0028309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_methylglyoxal","termid":"PBO:0028309"}


id: PBO:0047774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box C1","termid":"PBO:0047774"}


id: GO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the siderochrome pyoverdine.","definition_xrefs":["PMID:15317763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"pyoverdine metabolic process","synonyms":[{"name":"pyoverdine metabolism","type":"exact"}],"termid":"GO:0002048"}


id: FYPO:0005939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the replicative lifespan of a cell population, i.e. the number of divisions cells in the population undergo before death, is lower than normal.","definition_xrefs":["PomBase:mah","PMID:28139976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased replicative lifespan","synonyms":[{"name":"decreased cell population replicative lifespan","type":"exact"},{"name":"decreased population replicative lifespan","type":"exact"},{"name":"reduced replicative lifespan","type":"exact"}],"termid":"FYPO:0005939"}


id: PBO:0050023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP beta 1","termid":"PBO:0050023"}


id: PBO:0028273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_microtubule_dwell_time_at_cell_tip","termid":"PBO:0028273"}


id: PBO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A9","termid":"PBO:0039627"}


id: PR:O14002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak2 gene.","definition_xrefs":["UniProtKB:O14002","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.09","synonyms":[{"name":"Spom972h-mak2","type":"exact"},{"name":"his-Asp phosphorelay kinase phk1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14002"}


id: GO:2000724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"is_a","term_name":"regulation of cardiac vascular smooth muscle cell differentiation","termid":"GO:2000722"},{"relation_name":"positively_regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"positive regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000724"}


id: GO:0006060
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"sorbitol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P461-PWY"],"synonyms":[{"name":"sorbitol metabolism","type":"exact"}],"termid":"GO:0006060","terms_by_termid":{"GO:0006062":null}}


id: PATO:0005015
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an entity or set of entities in which size increases or decreases along the extent of the entity or set.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapered size","synonyms":[{"name":"gradient of size","type":"exact"}],"termid":"PATO:0005015"}


id: FYPO:0004711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more translation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PMID:18203864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of translation gene mRNA during vegetative growth","termid":"FYPO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of translation gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of translation gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of translation gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of translation gene transcripts during vegetative growth","type":"exact"},{"name":"decreased translation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of translation gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004711"}


id: PBO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.8","termid":"PBO:0001461"}


id: PBO:0004762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg3","termid":"PBO:0004762"}


id: PBO:0091099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 5, Pup2","termid":"PBO:0091099"}


id: PBO:0058281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4658","termid":"PBO:0058281"}


id: PBO:0047118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 166 member A","termid":"PBO:0047118"}


id: PBO:0045438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 3","termid":"PBO:0045438"}


id: GO:0044242
data:
  {"annotated_genes":["SJAG_02089","SJAG_04292","SJAG_04973","SJAG_04954","SJAG_01219","SJAG_04110","SJAG_03204","SJAG_00706","SJAG_01036","SJAG_00199","SJAG_02161","SJAG_02100","SJAG_02543","SJAG_00413","SJAG_02093","SJAG_00321","SJAG_00622","SJAG_03604","SJAG_00519","SJAG_02091","SJAG_04311","SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88129,93394,109901],"is_not":false,"summary":null,"term":"GO:0044242"},{"annotations":[76920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046464"},{"annotations":[107810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[97302,98789,110816,87427,87418,93485,85639,96588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046475"},{"annotations":[89554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046461"},{"annotations":[113075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[89555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[89003,91611,97650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009395"},{"annotations":[95759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[104741,85340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"},{"annotations":[89669,87433,113669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipids, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_00413":null,"SJAG_00519":null,"SJAG_00622":null,"SJAG_00706":null,"SJAG_01036":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02543":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04311":null,"SJAG_04954":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"cellular lipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular lipid breakdown","type":"exact"},{"name":"cellular lipid catabolism","type":"exact"},{"name":"cellular lipid degradation","type":"exact"}],"termid":"GO:0044242","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0006660":null,"GO:0009395":null,"GO:0016095":null,"GO:0019433":null,"GO:0034638":null,"GO:0044242":null,"GO:0046461":null,"GO:0046464":null,"GO:0046475":null,"GO:0046521":null}}


id: GO:0031688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A2B adenosine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"A2B adenosine receptor binding","synonyms":[{"name":"A2B adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031688"}


id: PBO:0029775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_branched,_curved,_elongated_cells_(obsolete_FYPO:0002464)","termid":"PBO:0029775"}


id: PBO:0075960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 3","termid":"PBO:0075960"}


id: GO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + taurolithocholate = adenosine 3',5'-bisphosphate + taurolithocholate sulfate.","definition_xrefs":["EC:2.8.2.14","MetaCyc:BILE-SALT-SULFOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"bile-salt sulfotransferase activity","secondary_identifiers":["RHEA:14013"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:glycolithocholate sulfotransferase activity","type":"related"},{"name":"BAST I activity","type":"narrow"},{"name":"bile acid sulfotransferase I activity","type":"narrow"},{"name":"bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity","type":"related"},{"name":"bile salt:3'phosphoadenosine-5'-phosphosulfate:sulfotransferase activity","type":"related"},{"name":"bile-salt sulphotransferase activity","type":"exact"},{"name":"glycolithocholate sulfotransferase activity","type":"narrow"}],"termid":"GO:0047704"}


id: GO:0044202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the host nuclear envelope; continuous with the endoplasmic reticulum of the host cell and sometimes studded with ribosomes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host organelle outer membrane","termid":"GO:0039661"},{"relation_name":"is_a","term_name":"host cell nuclear membrane","termid":"GO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear outer membrane","termid":"GO:0044202"}


id: PBO:0031074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_phenotype","termid":"PBO:0031074"}


id: SO:0000791
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000791 cloned_genomic (obsolete SO:0000791)","termid":"SO:0000791"}


id: PBO:0084169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved SUMO E3 ligase subunit of SMC5-SMC6 complex; required for anchoring dsDNA breaks to the nuclear periphery; SMC5-SMC6 plays a key role in removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; required for efficient sister chromatid cohesion; mutants are sensitive to MMS, show increased spontaneous mutation and mitotic recombination; SUMOylates and inhibits Snf1p function; supports nucleolar function","termid":"PBO:0084169"}


id: PBO:0047036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 99 member A","termid":"PBO:0047036"}


id: PBO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog (predicted)","termid":"PBO:0002518"}


id: PR:O14154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde5 gene.","definition_xrefs":["UniProtKB:O14154","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase mde5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.09","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mde5","type":"exact"},{"name":"mei4-dependent protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14154"}


id: PBO:0048922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member S","termid":"PBO:0048922"}


id: PBO:0083999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol 3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase; dual substrate-specific acyltransferase of the glycerolipid biosynthesis pathway; prefers 16-carbon fatty acids; similar to Gpt2p; gene is constitutively transcribed","termid":"PBO:0083999"}


id: PBO:0055386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2816","termid":"PBO:0055386"}


id: PBO:0058968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mohawk homeobox","termid":"PBO:0058968"}


id: PBO:0030243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_water_deprivation","termid":"PBO:0030243"}


id: GO:0050468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-reticuline + O2 = (S)-scoulerine + H2O2 + H+.","definition_xrefs":["RHEA:19885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"reticuline oxidase activity","secondary_identifiers":["KEGG_REACTION:R03831","MetaCyc:RETICULINE-OXIDASE-RXN","EC:1.21.3.3"],"synonyms":[{"name":"(S)-reticuline:oxygen oxidoreductase (methylene-bridge-forming)","type":"related"},{"name":"BBE","type":"related"},{"name":"berberine bridge enzyme activity","type":"related"},{"name":"berberine-bridge-forming enzyme activity","type":"related"},{"name":"tetrahydroprotoberberine synthase activity","type":"related"}],"termid":"GO:0050468"}


id: PBO:0088520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, 2-oxoadipate/2-oxoglutarate","termid":"PBO:0088520"}


id: PBO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 13","termid":"PBO:0072196"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: PBO:0077099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8 homolog B","termid":"PBO:0077099"}


id: PBO:0108600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_causally_upstream_of","termid":"PBO:0108600"}


id: PBO:0077508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 225B","termid":"PBO:0077508"}


id: FYECO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pantothenate was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited pantothenate","termid":"FYECO:0000189"}


id: GO:1901944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving miltiradiene.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene metabolic process","synonyms":[{"name":"miltiradiene metabolism","type":"exact"}],"termid":"GO:1901944"}


id: PBO:0080426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 10","termid":"PBO:0080426"}


id: GO:0015362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["TC:2.A.47.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high-affinity sodium:dicarboxylate symporter activity","secondary_identifiers":["Reactome:R-HSA-433101"],"synonyms":[{"name":"high affinity sodium:dicarboxylate cotransporter activity","type":"broad"},{"name":"high affinity sodium:dicarboxylate symporter activity","type":"exact"}],"termid":"GO:0015362"}


id: PBO:0081789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 717","termid":"PBO:0081789"}


id: GO:0120190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph","PMID:22767443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of bile acid secretion","termid":"GO:0120188"},{"relation_name":"negatively_regulates","term_name":"bile acid secretion","termid":"GO:0032782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of bile acid secretion","termid":"GO:0120190"}


id: PR:000028938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1-like transcription factor reduced form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-1-like transcription factor","termid":"PR:000027897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1-like transcription factor reduced form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1783.07c","synonyms":[{"name":"Spom-pap1/Red+","type":"exact"}],"termid":"PR:000028938"}


id: PBO:0042097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 169","termid":"PBO:0042097"}


id: PBO:0049821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC11 antisense RNA 1","termid":"PBO:0049821"}


id: PBO:0079862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC homeobox","termid":"PBO:0079862"}


id: FYPO:0002859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the non-growing cell tip is abolished. The new cell tip formed upon cell division does not grow until after new end take-off.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to non-growing cell tip","synonyms":[{"name":"abolished protein localisation to non-growing cell tip","type":"exact"},{"name":"abolished protein localization to new cell end","type":"related"},{"name":"abolished protein localization to new cell tip","type":"related"},{"name":"abolished protein localization to new non-growing cell tip","type":"exact"},{"name":"abolished protein localization to non-growing cell end","type":"exact"},{"name":"abolished protein localization to non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to non-growing cell tip during vegetative growth","type":"exact"},{"name":"protein localization to non-growing cell tip abolished","type":"exact"}],"termid":"FYPO:0002859"}


id: PR:O94662
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C651.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.04","synonyms":[{"name":"Spom972h-SPBC651.04","type":"exact"}],"termid":"PR:O94662"}


id: GO:1990666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of the serine protease PCSK9 (proprotein convertase subtilisin/kexin-9) and a low-density lipoprotein receptor (LDLR). Interaction typically occurs through the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR, and complex formation promotes degradation of the LDLR through the endosome/lysosome pathway.","definition_xrefs":["GOC:nc","PMID:24440079","GOC:BHF","PMID:18250299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PCSK9-LDLR complex","synonyms":[{"name":"PCSK9.LDLR complex","type":"exact"},{"name":"PCSK9/LDL-R complex","type":"exact"},{"name":"PCSK9:EGF-A complex","type":"related"},{"name":"PCSK9:low-density lipoprotein receptor complex","type":"exact"}],"termid":"GO:1990666"}


id: GO:0043075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The nucleus of a plant pollen cell, the male gamete, and its descendents.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm cell nucleus (sensu Magnoliophyta) (obsolete GO:0043075)","synonyms":[{"name":"pollen germ cell nucleus","type":"exact"},{"name":"pollen germ-cell nucleus","type":"exact"},{"name":"sperm cell nucleus (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0043075"}


id: PBO:0002972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transporter Pgt1","termid":"PBO:0002972"}


id: MOD:00632
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this chemical derivative modification from Unimod 321 is deprecated.","definition_xrefs":["Unimod:321"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00632 N-succinimide (obsolete MOD:00632)","termid":"MOD:00632"}


id: PBO:0035980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_DNA_replication_initiation_from_late_origin","termid":"PBO:0035980"}


id: PBO:0031880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0031880"}


id: PBO:0055960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 74A","termid":"PBO:0055960"}


id: GO:0075099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075099)","termid":"GO:0075099"}


id: PR:O13614
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1002 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.08","synonyms":[{"name":"Spom972h-rps1002","type":"exact"}],"termid":"PR:O13614"}


id: PBO:0045656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled segment polarity protein 1","termid":"PBO:0045656"}


id: PR:O74809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alb1 gene.","definition_xrefs":["UniProtKB:O74809","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2D10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.19c","synonyms":[{"name":"Spom972h-alb1","type":"exact"}],"termid":"PR:O74809"}


id: PBO:0069868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1155, pseudogene","termid":"PBO:0069868"}


id: GO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by erythrocytes. The process often starts with binding of complement receptor 1 (CR1) on the surface of erythrocytes to a complement coated immune complex. The complex bound to erythrocyte CR1 is then transported to the liver or spleen where it is presented to phagocytes. The process ends when the complex is removed from CR1, allowing the erythrocyte to return to general circulation.","definition_xrefs":["PMID:11414352","PMID:24022490","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by erythrocytes","secondary_identifiers":["Wikipedia:Immune_complex"],"synonyms":[{"name":"immune complex clearance by RBCs","type":"exact"},{"name":"immune complex clearance by red blood cells","type":"exact"}],"termid":"GO:0002435"}


id: PBO:0064094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITRM1 antisense RNA 1","termid":"PBO:0064094"}


id: GO:0061182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of chondrocyte differentiation","termid":"GO:0032331"},{"relation_name":"is_a","term_name":"regulation of chondrocyte development","termid":"GO:0061181"},{"relation_name":"negatively_regulates","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte development","termid":"GO:0061182"}


id: GO:1905308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a miconazole stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to miconazole","termid":"GO:1905307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to miconazole","termid":"GO:1905308"}


id: GO:0043639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzoate, the anion of benzoic acid (benzenecarboxylic acid), a fungistatic compound widely used as a food preservative; it is conjugated to glycine in the liver and excreted as hippuric acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate metabolic process","termid":"GO:0018874"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"benzoate catabolic process","synonyms":[{"name":"benzoate breakdown","type":"exact"},{"name":"benzoate catabolism","type":"exact"},{"name":"benzoate degradation","type":"exact"}],"termid":"GO:0043639"}


id: GO:0042129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell proliferation","synonyms":[{"name":"regulation of T lymphocyte proliferation","type":"exact"},{"name":"regulation of T-cell proliferation","type":"exact"},{"name":"regulation of T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042129"}


id: GO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"}


id: PBO:0064846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 13 like","termid":"PBO:0064846"}


id: PBO:0081791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 721","termid":"PBO:0081791"}


id: PBO:0053656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 709","termid":"PBO:0053656"}


id: PBO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 3, pseudogene","termid":"PBO:0039640"}


id: PBO:0054108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1473","termid":"PBO:0054108"}


id: PBO:0079399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 6","termid":"PBO:0079399"}


id: FYPO:0004208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K4 specific histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity (H3-K4 specific)","synonyms":[{"name":"abnormal H3-K4 specific histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004208"}


id: PBO:0061253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 3","termid":"PBO:0061253"}


id: PBO:0069519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 788, pseudogene","termid":"PBO:0069519"}


id: PBO:0088213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable element zinc finger related protein","termid":"PBO:0088213"}


id: GO:0004680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete casein kinase activity (obsolete GO:0004680)","synonyms":[{"name":"casein kinase activity","type":"exact"}],"termid":"GO:0004680"}


id: PBO:0004036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0004036"}


id: GO:0018782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-3-chloroacrylic acid + H2O = H+ + HCl + malonate semialdehyde.","definition_xrefs":["UM-BBD_reactionID:r0688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cis-chloroacrylic acid dehalogenase activity","termid":"GO:0018782"}


id: PBO:0062167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 8 pseudogene","termid":"PBO:0062167"}


id: GO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of receptor recycling","termid":"GO:0001919"}


id: SO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_LTR_component","termid":"SO:0000849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_three_prime_LTR_region","synonyms":[{"name":"U5 3' long terminal repeat region","type":"exact"},{"name":"U5 three prime LTR region","type":"exact"}],"termid":"SO:0000432"}


id: MOD:00952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the loss of a water molecule.","definition_xrefs":["PubMed:10801322","RESID:AA0441#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asp)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asp-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:00952"}


id: GO:0010396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnogalacturonan II, a low molecular mass (5-10KDa) pectic polysaccharide. The backbone of RG-II contains at least 8 1,4-linked alpha-D-GalpA residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan II metabolic process","synonyms":[{"name":"rhamnogalacturonan II metabolism","type":"exact"}],"termid":"GO:0010396"}


id: PBO:0043045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 1","termid":"PBO:0043045"}


id: GO:0030053
data:
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id: PBO:0027676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_small_cell","termid":"PBO:0027676"}


id: PBO:0027806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5926","termid":"PBO:0027806"}


id: PBO:0045107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA meiotic recombinase 1","termid":"PBO:0045107"}


id: GO:1905459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["PMID:26493107","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"regulation of VSMC apoptosis","type":"narrow"},{"name":"regulation of VSMC apoptotic process","type":"exact"},{"name":"regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"regulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905459"}


id: FYPO:0000432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of fermentation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased fermentation","synonyms":[{"name":"decreased fermentation during mitotic cell cycle","type":"related"},{"name":"decreased fermentation during vegetative growth","type":"exact"},{"name":"decreased fermentative metabolism","type":"exact"},{"name":"fermentative metabolism: decreased","type":"related"},{"name":"reduced fermentation","type":"exact"}],"termid":"FYPO:0000432"}


id: MOD:01993
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and the beta-carbon of another amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"}


id: PBO:0044845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 130D (pseudogene)","termid":"PBO:0044845"}


id: GO:0098813
data:
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id: GO:0021923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain region that is adjacent to the ventricular cavity.","definition_xrefs":["PMID:15157725","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","GOC:cls","PMID:12593981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}


id: PR:Q9UTD5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg10 gene.","definition_xrefs":["UniProtKB:Q9UTD5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like-conjugating enzyme ATG10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.04","synonyms":[{"name":"Spom972h-atg10","type":"exact"},{"name":"autophagy-related protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTD5"}


id: GO:0016327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The apical end of the lateral plasma membrane of epithelial cells.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"apicolateral plasma membrane","synonyms":[{"name":"apical lateral plasma membrane","type":"exact"}],"termid":"GO:0016327"}


id: PBO:0060491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 2","termid":"PBO:0060491"}


id: PBO:0090129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Any1","termid":"PBO:0090129"}


id: PR:O94276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- stc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein P8B7.28c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.28c","synonyms":[{"name":"Spom972h-stc1","type":"exact"}],"termid":"PR:O94276"}


id: FYPO:0000087
data:
  {"alleles_by_uniquename":{"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115705],"is_not":false,"summary":null,"term":"FYPO:0000087"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrogen peroxide. Cells stop growing (and may die) at a concentration of hydrogen peroxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"},{"relation_name":"is_a","term_name":"sensitive to oxidative stress","termid":"FYPO:0000726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":1,"genotypes_by_uniquename":{"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to hydrogen peroxide","references_by_uniquename":{"PMID:27678009":null},"single_locus_annotated_genes":["SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta"],"synonyms":[{"name":"hypersensitive to hydrogen peroxide","type":"exact"},{"name":"sensitive to H2O2","type":"exact"},{"name":"sensitive to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000087","terms_by_termid":{"FYPO:0000087":null}}


id: PBO:0073601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 2","termid":"PBO:0073601"}


id: PBO:0031057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_normal_cell_morphology","termid":"PBO:0031057"}


id: PBO:0048748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1 pseudogene 1","termid":"PBO:0048748"}


id: PBO:0088841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2","termid":"PBO:0088841"}


id: PBO:0041838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 18","termid":"PBO:0041838"}


id: PBO:0017563
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonprogressive congenital ataxia","termid":"PBO:0017563"}


id: PBO:0049321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase like domain containing 1","termid":"PBO:0049321"}


id: GO:0097510
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109958],"is_not":false,"summary":null,"term":"GO:0097510"}]},"cv_name":"biological_process","definition":"A base-excision repair, AP site formation process occurring via excision of a deaminated base.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"base-excision repair, AP site formation via deaminated base removal","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097510","terms_by_termid":{"GO:0097510":null}}


id: GO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + O2 = glutathione disulfide + H2O2.","definition_xrefs":["EC:1.8.3.3","RHEA:24112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glutathione oxidase activity","secondary_identifiers":["KEGG_REACTION:R00120","MetaCyc:GLUTATHIONE-OXIDASE-RXN"],"synonyms":[{"name":"glutathione:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047950"}


id: PR:P87309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.08","synonyms":[{"name":"Spom972h-mde2","type":"exact"}],"termid":"PR:P87309"}


id: GO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-glucose + H2O = AMP + glucose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-glucose pyrophosphohydrolase activity","termid":"GO:0080042"}


id: PBO:0012040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTR family peptide transporter Ptr2","termid":"PBO:0012040"}


id: FYPO:0006788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased ribonuclease activity","termid":"FYPO:0003822"},{"relation_name":"is_a","term_name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased poly(A)-specific ribonuclease activity","synonyms":[{"name":"reduced poly(A)-specific ribonuclease activity","type":"exact"}],"termid":"FYPO:0006788"}


id: GO:0047610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylsalicylate + H2O = acetate + H+ + salicylate.","definition_xrefs":["EC:3.1.1.55","RHEA:11752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0019213","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acetylsalicylate deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLSALICYLATE-DEACETYLASE-RXN","KEGG_REACTION:R02942"],"synonyms":[{"name":"acetylsalicylate O-acetylhydrolase activity","type":"related"},{"name":"acetylsalicylic acid esterase activity","type":"related"},{"name":"aspirin esterase activity","type":"related"},{"name":"aspirin hydrolase activity","type":"related"}],"termid":"GO:0047610"}


id: PBO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase pseudogene","termid":"PBO:0002480"}


id: GO:0010102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a lateral root are generated and organized. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic root morphogenesis","termid":"GO:0010101"},{"relation_name":"part_of","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root morphogenesis","termid":"GO:0010102"}


id: PBO:0071177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 18","termid":"PBO:0071177"}


id: SOFP:chromosome
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Name of chromosome the feature occurs on(?)","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome","termid":"SOFP:chromosome"}


id: PBO:0059156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase 1 pseudogene 1","termid":"PBO:0059156"}


id: GO:0051632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetylcholine uptake","termid":"GO:0051631"},{"relation_name":"is_a","term_name":"negative regulation of amine transport","termid":"GO:0051953"},{"relation_name":"negatively_regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of acetylcholine uptake","synonyms":[{"name":"down regulation of acetylcholine uptake","type":"exact"},{"name":"down-regulation of acetylcholine uptake","type":"exact"},{"name":"downregulation of acetylcholine uptake","type":"exact"},{"name":"negative regulation of acetylcholine import","type":"exact"}],"termid":"GO:0051632"}


id: PBO:0071384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 7","termid":"PBO:0071384"}


id: GO:1990713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that negatively regulates apoptotic processes. In human, this anti-apoptotic complex is a homodimer of BIRC5 (survivin) and provides one survivin molecule to the chromosomal passenger complex (CPC).","definition_xrefs":["GOC:bhm","PMID:10949038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"survivin complex","synonyms":[{"name":"Baculoviral IAP repeat-containing protein 5 complex","type":"exact"},{"name":"survivin homodimer complex","type":"narrow"}],"termid":"GO:1990713"}


id: GO:0071272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound metabolic process","termid":"GO:1901376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphine metabolic process","secondary_identifiers":["Wikipedia:Morphine"],"synonyms":[{"name":"morphine metabolism","type":"exact"}],"termid":"GO:0071272"}


id: PBO:0073644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 31, pseudogene","termid":"PBO:0073644"}


id: PBO:0029799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_misoriented_actin_cables","termid":"PBO:0029799"}


id: PBO:0027324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_normal_numbers","termid":"PBO:0027324"}


id: PBO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 8","termid":"PBO:0071169"}


id: GO:1900189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"positively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"activation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"activation of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"positive regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"up-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"upregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"upregulation of cell adhesion involved in single-species biofilm formation","type":"exact"}],"termid":"GO:1900189"}


id: PBO:0052313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0825","termid":"PBO:0052313"}


id: PBO:0070613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 81","termid":"PBO:0070613"}


id: PBO:0083714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein that plays a central role in ERAD; forms HRD complex with Hrd1p and ER-associated protein degradation (ERAD) determinants that engages in lumen to cytosol communication and coordination of ERAD events","termid":"PBO:0083714"}


id: GO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrokinin and transmitting the signal within the cell to induce a change in cell activity. Pyrokinins are a group of insect neuropeptides that share the common C-terminal pentapeptide sequence Phe-X-Pro-Arg-Leu-NH2 (X = S, T, K, A, or G). They play a central role in diverse physiological processes including stimulation of gut motility, production and release of sex pheromones, diapause, and pupariation.","definition_xrefs":["PMID:19186060","GOC:ha","PMID:12951076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"pyrokinin receptor activity","synonyms":[{"name":"PK receptor activity","type":"exact"}],"termid":"GO:0036401"}


id: PR:Q09805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00316","PRO:DNx","PANTHER:PTHR11679:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.03c","secondary_identifiers":["UniProtKB:Q09805"],"synonyms":[{"name":"Spom972h-VPS45","type":"exact"}],"termid":"PR:Q09805"}


id: PBO:0049870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger 2","termid":"PBO:0049870"}


id: PBO:0090499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Ndc80","termid":"PBO:0090499"}


id: PBO:0005701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase Adg3 (predicted)","termid":"PBO:0005701"}


id: GO:0097152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf","CL:0000134","PMID:18231833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process","synonyms":[{"name":"mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:0097152"}


id: PR:P24782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P24782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.16c","synonyms":[{"name":"Spom972h-dbp2","type":"exact"},{"name":"p68-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P24782"}


id: PBO:0012608
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ADR2","termid":"PBO:0012608"}


id: PR:O59667
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine biosynthesis bifunctional protein his7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.02c","synonyms":[{"name":"Spom972h-his7","type":"exact"}],"termid":"PR:O59667"}


id: PBO:0072421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 26","termid":"PBO:0072421"}


id: PBO:0077144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine kinase 1","termid":"PBO:0077144"}


id: GO:0062126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid primary amide metabolic process","synonyms":[{"name":"primary fatty amide metabolic process","type":"exact"}],"termid":"GO:0062126"}


id: PBO:0044705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX5 pseudogene 1","termid":"PBO:0044705"}


id: GO:1990058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit replum over time, from its formation to the mature structure. The fruit replum is a portion of fruit placenta tissue that divides a fruit into two or more chambers and develops from a replum.","definition_xrefs":["PMID:23133401","PO:0025267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit replum development","termid":"GO:1990058"}


id: GO:0052866
data:
  {"annotated_genes":["SJAG_00880","SJAG_03375","SJAG_04545","SJAG_00063","SJAG_02706","SJAG_02289","SJAG_03248","SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[104222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"},{"annotations":[107124,104223,83196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"},{"annotations":[87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106018"},{"annotations":[87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004438"},{"annotations":[104224,107125,96734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"},{"annotations":[92603,101863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol phosphate(n) + H2O = phosphatidylinositol phosphate(n-1) + phosphate. This reaction is the removal of a phosphate group from a phosphatidylinositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00880":null,"SJAG_02289":null,"SJAG_02706":null,"SJAG_03131":null,"SJAG_03248":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide phosphatase activity","type":"exact"}],"termid":"GO:0052866","terms_by_termid":{"GO:0004438":null,"GO:0004439":null,"GO:0016314":null,"GO:0034485":null,"GO:0043812":null,"GO:0043813":null,"GO:0106018":null}}


id: PBO:0079588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2D3 antisense RNA 1","termid":"PBO:0079588"}


id: GO:0039595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA).","definition_xrefs":["PMID:17360652","PMID:12163576","PMID:22696660","PMID:16477041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated degradation of host mRNA","secondary_identifiers":["VZ:901"],"synonyms":[{"name":"induction by virus of catabolism of host mRNA","type":"exact"},{"name":"induction by virus of host mRNA catabolic process","type":"exact"},{"name":"induction of host mRNA decay","type":"exact"},{"name":"promotion of host mRNA degradation","type":"exact"},{"name":"viral induction of host mRNA decay","type":"exact"},{"name":"virus-mediated mRNA decay","type":"exact"}],"termid":"GO:0039595"}


id: PBO:0075269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 22","termid":"PBO:0075269"}


id: GO:0009720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hormone stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"detection of endogenous stimulus","termid":"GO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hormone stimulus","synonyms":[{"name":"perception of hormone stimulus","type":"related"}],"termid":"GO:0009720"}


id: PBO:0041293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 antisense RNA 1","termid":"PBO:0041293"}


id: PBO:0034433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_vegetative_growth","termid":"PBO:0034433"}


id: PBO:0040316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit beta","termid":"PBO:0040316"}


id: PBO:0074425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 24","termid":"PBO:0074425"}


id: PBO:0073043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 1","termid":"PBO:0073043"}


id: PBO:0025466
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mrc1 associates with origins later than MCM complex, but slightly earlier than Cdc45","termid":"PBO:0025466"}


id: PR:P40376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pka1 gene.","definition_xrefs":["UniProtKB:P40376","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.10","synonyms":[{"name":"Spom972h-pka1","type":"exact"}],"termid":"PR:P40376"}


id: GO:0036206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:bf","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone gene expression (obsolete GO:0036206)","synonyms":[{"name":"regulation of expression of histone-encoding gene","type":"exact"}],"termid":"GO:0036206"}


id: GO:0030804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030804)","synonyms":[{"name":"activation of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"positive regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of cyclic nucleotide formation","type":"exact"},{"name":"positive regulation of cyclic nucleotide synthesis","type":"exact"},{"name":"stimulation of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of cyclic nucleotide biosynthetic process","type":"exact"}],"termid":"GO:0030804"}


id: PBO:0003512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR6 family, implicated in cell cycle","termid":"PBO:0003512"}


id: GO:0050899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"nitrile catabolic process","synonyms":[{"name":"nitrile breakdown","type":"exact"},{"name":"nitrile catabolism","type":"exact"},{"name":"nitrile degradation","type":"exact"}],"termid":"GO:0050899"}


id: PBO:0084480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maturase-like protein","termid":"PBO:0084480"}


id: GO:0003435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that contributes to the progression of a growth plate cartilage chondrocyte over time.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte development","termid":"GO:0003431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in growth plate cartilage chondrocyte development","synonyms":[{"name":"hedgehog signaling pathway involved in growth plate cartilage chondrocyte development","type":"exact"},{"name":"hh signaling pathway involved in growth plate cartilage chondrocyte development","type":"exact"},{"name":"smoothened signalling pathway involved in growth plate cartilage chondrocyte development","type":"exact"}],"termid":"GO:0003435"}


id: PBO:0091360
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human HRAS","termid":"PBO:0091360"}


id: PBO:0048340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 51","termid":"PBO:0048340"}


id: PBO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Hrp1","termid":"PBO:0001404"}


id: PBO:0091115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase, involved in protein processing","termid":"PBO:0091115"}


id: GO:0075325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism disseminates its spores.","definition_xrefs":["Wikipedia:Spore"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproduction","termid":"GO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore dispersal","secondary_identifiers":["GO:0075326","GO:0075327"],"synonyms":[{"name":"active spore dispersal on or near host","type":"narrow"},{"name":"active spore dispersal on or near host during symbiotic interaction","type":"narrow"},{"name":"passive spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host during symbiotic interaction","type":"exact"}],"termid":"GO:0075325"}


id: GO:0080134
data:
  {"annotated_genes":["SJAG_01253","SJAG_04457","SJAG_04825","SJAG_01632","SJAG_05000","SJAG_02875","SJAG_00823","SJAG_01150","SJAG_00293","SJAG_03048","SJAG_00642","SJAG_02104","SJAG_00369","SJAG_01114","SJAG_04522","SJAG_03695","SJAG_03568","SJAG_02392","SJAG_00573","SJAG_04039","SJAG_03417","SJAG_01205","SJAG_03263","SJAG_02682","SJAG_03160"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99642,91529,95186,102936,103514,114401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[98161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[87894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903298"},{"annotations":[107683,86768,101768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[113361,108015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[103302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[109468,109469,109470,113085,89318,89319,89320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[98183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[85572,89516,106129,102465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006282"},{"annotations":[86448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[105254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00369":null,"SJAG_00573":null,"SJAG_00642":null,"SJAG_00823":null,"SJAG_01114":null,"SJAG_01150":null,"SJAG_01205":null,"SJAG_01253":null,"SJAG_01632":null,"SJAG_02104":null,"SJAG_02392":null,"SJAG_02682":null,"SJAG_02875":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03263":null,"SJAG_03417":null,"SJAG_03568":null,"SJAG_03695":null,"SJAG_04039":null,"SJAG_04457":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0080134","terms_by_termid":{"GO:0006282":null,"GO:0010569":null,"GO:0045739":null,"GO:1903138":null,"GO:1903298":null,"GO:1904332":null,"GO:1904547":null,"GO:2000639":null,"GO:2000640":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0041332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3","termid":"PBO:0041332"}


id: PBO:0088519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein binding protein Sla1 family, Shd1","termid":"PBO:0088519"}


id: PBO:0075300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 1","termid":"PBO:0075300"}


id: GO:0006005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-fucose (6-deoxy-L-galactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose biosynthetic process","termid":"GO:0042353"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-fucose biosynthetic process","synonyms":[{"name":"L-fucose anabolism","type":"exact"},{"name":"L-fucose biosynthesis","type":"exact"},{"name":"L-fucose formation","type":"exact"},{"name":"L-fucose synthesis","type":"exact"}],"termid":"GO:0006005"}


id: GO:0071589
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[104423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any pyridine nucleoside, one of a family of organic molecules consisting of a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyridine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleoside anabolism","type":"exact"},{"name":"pyridine nucleoside biosynthesis","type":"exact"},{"name":"pyridine nucleoside formation","type":"exact"},{"name":"pyridine nucleoside synthesis","type":"exact"}],"termid":"GO:0071589","terms_by_termid":{"GO:0071590":null,"GO:0071592":null}}


id: PBO:0047104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member C, pseudogene","termid":"PBO:0047104"}


id: FYPO:0005687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable equatorial microtubule organizing center (eMTOC).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0002399"],"is_obsolete":false,"name":"eMTOC absent from cell","synonyms":[{"name":"equatorial microtubule organizing center absent from cell","type":"exact"},{"name":"absent eMTOC","type":"exact"},{"name":"eMTOC absent from cell during mitotic cell cycle","type":"related"},{"name":"eMTOC absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005687"}


id: GO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanolamine metabolic process","termid":"GO:0006580"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine biosynthetic process","synonyms":[{"name":"ethanolamine anabolism","type":"exact"},{"name":"ethanolamine biosynthesis","type":"exact"},{"name":"ethanolamine formation","type":"exact"},{"name":"ethanolamine synthesis","type":"exact"}],"termid":"GO:0046335"}


id: PR:P34068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P34068","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm1","termid":"PR:000025003"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.05","synonyms":[{"name":"Spom972h-mfm1","type":"exact"}],"termid":"PR:P34068"}


id: PATO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid.","definition_xrefs":["wordreference.com:wordreference.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wetness","termid":"PATO:0001822"}


id: GO:2000606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"}


id: GO:1990935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein involved in the process of removing sections of the primary RNA transcript to form the mature form of the RNA.","definition_xrefs":["PMID:11118435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"splicing factor binding","termid":"GO:1990935"}


id: GO:0047669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1,4-alpha-D-glucosyl(n) = D-fructose + 1,4-alpha-D-glucosyl(n+1).","definition_xrefs":["EC:2.4.1.4","MetaCyc:AMYLOSUCRASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"amylosucrase activity","secondary_identifiers":["RHEA:24572"],"synonyms":[{"name":"sucrose-1,4-alpha-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047669"}


id: PATO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000003 assay (obsolete PATO:0000003)","termid":"PATO:0000003"}


id: FYPO:0003973
data:
  {"alleles_by_uniquename":{"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115594],"is_not":false,"summary":null,"term":"FYPO:0003973"}]},"cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization is abnormal, resulting in an abnormal spatial arrangement of nuclear pores within the nuclear envelope.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleus organization","termid":"FYPO:0000810"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01374":null},"genotype_count":1,"genotypes_by_uniquename":{"nup132delta":{"display_name":"nup132delta","display_uniquename":"nup132delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01374:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear pore localization","references_by_uniquename":{"PMID:33495454":null},"single_locus_annotated_genes":["SJAG_01374"],"single_locus_genotype_uniquenames":["nup132delta"],"synonyms":[{"name":"abnormal NPC localization","type":"exact"},{"name":"abnormal nuclear pore complex localization","type":"exact"},{"name":"abnormal nuclear pore distribution","type":"exact"},{"name":"abnormal nuclear pore localisation","type":"exact"},{"name":"abnormal nuclear pore localization during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear pore localization during vegetative growth","type":"exact"}],"termid":"FYPO:0003973","terms_by_termid":{"FYPO:0003973":null}}


id: PBO:0077559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 266","termid":"PBO:0077559"}


id: GO:0035522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.","definition_xrefs":["PMID:20436459","PMID:18226187","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete monoubiquitinated histone H2A deubiquitination (obsolete GO:0035522)","synonyms":[{"name":"monoubiquitinated histone H2A deubiquitinylation","type":"exact"},{"name":"monoubiquitinated histone H2A deubiquitylation","type":"exact"}],"termid":"GO:0035522"}


id: GO:0004594
data:
  {"annotated_genes":["SJAG_00427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106551],"is_not":false,"summary":null,"term":"GO:0004594"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate.","definition_xrefs":["EC:2.7.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00427":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"pantothenate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PANTOTHENATE-KIN-RXN","Reactome:R-HSA-196857","Reactome:R-HSA-199203","RHEA:16373"],"synonyms":[{"name":"ATP:(R)-pantothenate 4'-phosphotransferase activity","type":"related"},{"name":"ATP:pantothenate 4'-phosphotransferase activity","type":"related"},{"name":"D-pantothenate kinase activity","type":"related"},{"name":"pantothenate kinase (phosphorylating) activity","type":"related"},{"name":"pantothenic acid kinase activity","type":"related"}],"termid":"GO:0004594","terms_by_termid":{"GO:0004594":null}}


id: PBO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SKN7","termid":"PBO:0015697"}


id: GO:0046695
data:
  {"annotated_genes":["SJAG_02458","SJAG_02927","SJAG_04274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57802,57915,62791],"is_not":false,"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A SAGA-type histone acetyltransferase complex that contains a smaller form of Spt7 (lacking the SPT8 binding region) than the fungal SAGA complex, and consequently lacks Spt8. The complex is involved in the yeast retrograde response pathway, which is important for gene expression changes during mitochondrial dysfunction.","definition_xrefs":["PMID:33864814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02458":null,"SJAG_02927":null,"SJAG_04274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"SLIK (SAGA-like) complex","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"SAGA (alt) complex","type":"exact"},{"name":"SALSA complex","type":"exact"},{"name":"SLIK/SALSA complex","type":"exact"}],"termid":"GO:0046695","terms_by_termid":{"GO:0046695":null}}


id: PBO:0044336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 19","termid":"PBO:0044336"}


id: PBO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0005802"}


id: GO:1904738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a vascular associated smooth muscle cell from one site to another.","definition_xrefs":["GOC:TermGenie","PMID:20693317","GO_REF:0000091","GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell migration","synonyms":[{"name":"vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904738"}


id: PBO:0090475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Vti1","termid":"PBO:0090475"}


id: GO:0008901
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110826],"is_not":false,"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2.","definition_xrefs":["EC:1.12.7.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor","termid":"GO:0016699"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ferredoxin hydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:17445","GO:0016948","GO:0016951","UM-BBD_enzymeID:e0418","GO:0016949","GO:0016950","MetaCyc:HYDROG-RXN"],"synonyms":[{"name":"H(2) oxidizing hydrogenase activity","type":"broad"},{"name":"H(2) producing hydrogenase activity","type":"broad"},{"name":"H2 oxidizing hydrogenase","type":"broad"},{"name":"H2 producing hydrogenase","type":"broad"},{"name":"Ni-Fe hydrogenase activity","type":"narrow"},{"name":"Ni-Fe-Se hydrogenase activity","type":"narrow"},{"name":"[Fe] hydrogenase activity","type":"exact"},{"name":"[Fe] hydrogenase gamma","type":"related"},{"name":"bidirectional hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:ferredoxin oxidoreductase activity","type":"exact"},{"name":"hydrogenase (ferredoxin) activity","type":"related"},{"name":"hydrogenase I","type":"related"},{"name":"hydrogenase II","type":"related"},{"name":"hydrogenase activity","type":"broad"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"iron hydrogenase activity","type":"narrow"},{"name":"iron-only hydrogenase activity","type":"narrow"},{"name":"nickel hydrogenase activity","type":"narrow"},{"name":"nickel-iron hydrogenase activity","type":"narrow"},{"name":"nickel-iron-selenium hydrogenase activity","type":"narrow"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0008901","terms_by_termid":{"GO:0008901":null}}


id: PBO:0064175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XB, pseudogene","termid":"PBO:0064175"}


id: PBO:0041145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 4","termid":"PBO:0041145"}


id: PBO:0088071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; specifically disassembles unanchored ubiquitin chains; involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; similar to human isopeptidase T","termid":"PBO:0088071"}


id: PBO:0058149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4444-2","termid":"PBO:0058149"}


id: PBO:0066894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 194","termid":"PBO:0066894"}


id: GO:0102907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + sesquisabinene.","definition_xrefs":["EC:4.2.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"sesquisabinene synthase activity","secondary_identifiers":["MetaCyc:RXN-8622"],"termid":"GO:0102907"}


id: CHEBI:15996
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A purine ribonucleoside 5'-triphosphate that has formula C10H16N5O14P3.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP","termid":"CHEBI:15996"}


id: PBO:0031069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore","termid":"PBO:0031069"}


id: PBO:0053567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 582","termid":"PBO:0053567"}


id: PBO:0039839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 9","termid":"PBO:0039839"}


id: GO:1904008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium glutamate stimulus.","definition_xrefs":["GOC:TermGenie","PMID:20704590","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete response to monosodium glutamate (obsolete GO:1904008)","termid":"GO:1904008"}


id: PBO:0016889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug121","termid":"PBO:0016889"}


id: PBO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex PHD finger subunit Cti6","termid":"PBO:0090047"}


id: PBO:0044582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drebrin 1","termid":"PBO:0044582"}


id: GO:0030882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipid antigen.","definition_xrefs":["PMID:14500461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen binding","termid":"GO:0003823"},{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipid antigen binding","termid":"GO:0030882"}


id: PBO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein Fsc1","termid":"PBO:0013753"}


id: PBO:0084004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerophosphocholine acyltransferase (GPCAT); involved in in phosphatidylcholine (PC) synthesis; uses acyl-CoA to acylate glycero-3-phosphocholine to yield lyso-PC; also catalyzes acylation of glycerophosphoethanolamine with acyl-CoA; predicted to be an integral membrane protein","termid":"PBO:0084004"}


id: PBO:0055189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2613","termid":"PBO:0055189"}


id: PBO:0069733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1014, pseudogene","termid":"PBO:0069733"}


id: PBO:0073296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 18","termid":"PBO:0073296"}


id: GO:0016802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a thioether bond, -S-.","definition_xrefs":["EC:3.3.1.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ether bonds","termid":"GO:0016801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"trialkylsulfonium hydrolase activity","synonyms":[{"name":"thioether hydrolase activity","type":"exact"},{"name":"trialkylsulphonium hydrolase activity","type":"exact"}],"termid":"GO:0016802"}


id: GO:0035680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a posterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035680"}


id: PBO:0108692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Sec72","termid":"PBO:0108692"}


id: PBO:0011449
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe is missing the conserved C-terminal region found in other species","termid":"PBO:0011449"}


id: PBO:0053655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 708","termid":"PBO:0053655"}


id: GO:0070297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphorelay signal transduction system","synonyms":[{"name":"regulation of histidyl-aspartyl phosphorelay","type":"exact"},{"name":"regulation of two-component signal transduction system","type":"exact"},{"name":"regulation of two-component signal transduction system (phosphorelay)","type":"narrow"}],"termid":"GO:0070297"}


id: PBO:0068528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 129, pseudogene","termid":"PBO:0068528"}


id: GO:0006061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbitol metabolic process","termid":"GO:0006060"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"sorbitol biosynthetic process","synonyms":[{"name":"sorbitol anabolism","type":"exact"},{"name":"sorbitol biosynthesis","type":"exact"},{"name":"sorbitol formation","type":"exact"},{"name":"sorbitol synthesis","type":"exact"}],"termid":"GO:0006061"}


id: PBO:0041612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin binding protein 1","termid":"PBO:0041612"}


id: PBO:0084340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kynureninase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p","termid":"PBO:0084340"}


id: PBO:0075284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 25","termid":"PBO:0075284"}


id: GO:0018503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-1,2-dihydrodiolphenanthrene + NAD+ = H+ + NADH + 1,2-dihydroxyphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trans-1,2-dihydrodiolphenanthrene dehydrogenase activity","termid":"GO:0018503"}


id: PBO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med17","termid":"PBO:0018281"}


id: GO:1904389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a rod bipolar cell.","definition_xrefs":["GO_REF:0000086","PMID:16914133","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rod bipolar cell differentiation","termid":"GO:1904389"}


id: PBO:0073578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 9","termid":"PBO:0073578"}


id: PBO:0048005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 5","termid":"PBO:0048005"}


id: GO:0008737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fuculose + ATP = L-fuculose 1-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.51","RHEA:12376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"L-fuculokinase activity","secondary_identifiers":["KEGG_REACTION:R03241","MetaCyc:FUCULOKIN-RXN"],"synonyms":[{"name":"ATP:L-fuculose 1-phosphotransferase activity","type":"related"},{"name":"L-fuculokinase (phosphorylating)","type":"related"},{"name":"L-fuculose kinase activity","type":"related"}],"termid":"GO:0008737"}


id: PBO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming]","termid":"PBO:0002071"}


id: GO:2001244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway","synonyms":[{"name":"positive regulation of intrinsic apoptosis","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001244"}


id: PBO:0060317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYLK pseudogene 2","termid":"PBO:0060317"}


id: GO:0035344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hypoxanthine, 6-hydroxypurine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"hypoxanthine transport","synonyms":[{"name":"6-hydroxypurine transport","type":"exact"},{"name":"hypoxanthine transmembrane transport","type":"exact"}],"termid":"GO:0035344"}


id: GO:0006922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of lamins during apoptosis, leading to the irreversible breakdown of the nuclear lamina.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah","ISBN:0815332181"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of lamin involved in execution phase of apoptosis (obsolete GO:0006922)","synonyms":[{"name":"cleavage of lamin","type":"broad"},{"name":"cleavage of lamin involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0006922"}


id: PBO:0080079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 41","termid":"PBO:0080079"}


id: GO:0023017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via a diffusible molecule.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via diffusible molecule (obsolete GO:0023017)","synonyms":[{"name":"signal transmission via diffusible molecule","type":"exact"},{"name":"signaling via diffusible mediator","type":"exact"}],"termid":"GO:0023017"}


id: PBO:0017084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug150","termid":"PBO:0017084"}


id: GO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"M phase","secondary_identifiers":["Wikipedia:M_phase"],"synonyms":[{"name":"M-phase","type":"exact"}],"termid":"GO:0000279"}


id: GO:0046304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-nitropropane, a clear, colorless liquid with a mild, fruity odor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-nitropropane metabolic process","termid":"GO:0018938"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"2-nitropropane catabolic process","synonyms":[{"name":"2-nitropropane breakdown","type":"exact"},{"name":"2-nitropropane catabolism","type":"exact"},{"name":"2-nitropropane degradation","type":"exact"}],"termid":"GO:0046304"}


id: PBO:0068158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 465","termid":"PBO:0068158"}


id: PBO:0089169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop4","termid":"PBO:0089169"}


id: GO:0002819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune response","termid":"GO:0002819"}


id: PBO:0054205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1585","termid":"PBO:0054205"}


id: GO:0046550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of asparagine to (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine as found in microcin C7 produced from the mccA gene in E. coli plasmid pMccC7.","definition_xrefs":["RESID:AA0328"],"gene_count":0,"genotype_count":0,"name":"obsolete (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine (obsolete GO:0046550)","synonyms":[{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine anabolism from asparagine","type":"exact"},{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine formation from asparagine","type":"exact"},{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine synthesis from asparagine","type":"exact"}],"termid":"GO:0046550"}


id: FYPO:0000880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"},{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000880"}


id: GO:0039682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of unidirectional viral DNA replication that takes place on a circular DNA to rapidly produce numerous copies of the viral genome. Involves creating a nick in one strand of the circular DNA molecule at the origin of replication. DNA is then synthesized by DNA polymerase. Using the non-nicked strand as a template, replication proceeds around the circular DNA molecule, displacing the nicked strand as single-stranded DNA.","definition_xrefs":["VZ:915","GOC:bf","GOC:jl","Wikipedia:Rolling_circle_replication"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA strand displacement replication","termid":"GO:0039687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"rolling circle viral DNA replication","termid":"GO:0039682"}


id: PBO:0091416
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ELO3","termid":"PBO:0091416"}


id: PR:Q10276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eki1 gene.","definition_xrefs":["UniProtKB:Q10276","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.12c","synonyms":[{"name":"Spom972h-eki1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:Q10276"}


id: GO:0060571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelial sheet bends along a linear axis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial fold","synonyms":[{"name":"epithelial folding","type":"exact"},{"name":"folding of an epithelial sheet","type":"related"}],"termid":"GO:0060571"}


id: PBO:0063747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 12","termid":"PBO:0063747"}


id: GO:0005576
data:
  {"annotated_genes":["SJAG_02959","SJAG_05001","SJAG_02131","SJAG_00751","SJAG_00620","SJAG_02290","SJAG_02580","SJAG_04073","SJAG_04067","SJAG_03646","SJAG_00975","SJAG_00781","SJAG_03444","SJAG_02949","SJAG_02093","SJAG_00981","SJAG_01888","SJAG_02091","SJAG_02192","SJAG_04301","SJAG_01970","SJAG_01171","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83038,83039,83670,83752,84589,87416,87424,90765,91384,96108,96434,96585,97295,97380,97381,97734,97735,98249,98786,103983,106387,106388,109362,109363,109750,109751,110813,111649,112207],"is_not":false,"summary":null,"term":"GO:0005576"},{"annotations":[113724],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070062"}]},"cv_name":"cellular_component","definition":"The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_00751":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00981":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_01970":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02192":null,"SJAG_02290":null,"SJAG_02580":null,"SJAG_02949":null,"SJAG_02959":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04301":null,"SJAG_05001":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular region","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Extracellular"],"synonyms":[{"name":"extracellular","type":"exact"}],"termid":"GO:0005576","terms_by_termid":{"GO:0005576":null,"GO:0070062":null}}


id: GO:1905885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of triglyceride transport.","definition_xrefs":["GOC:TermGenie","PMID:25849533","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acylglycerol transport","termid":"GO:1901508"},{"relation_name":"is_a","term_name":"regulation of triglyceride transport","termid":"GO:1905883"},{"relation_name":"positively_regulates","term_name":"triglyceride transport","termid":"GO:0034197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of triglyceride transport","synonyms":[{"name":"activation of triacylglycerol transport","type":"narrow"},{"name":"activation of triglyceride transport","type":"narrow"},{"name":"positive regulation of triacylglycerol transport","type":"exact"},{"name":"up regulation of triacylglycerol transport","type":"exact"},{"name":"up regulation of triglyceride transport","type":"exact"},{"name":"up-regulation of triacylglycerol transport","type":"exact"},{"name":"up-regulation of triglyceride transport","type":"exact"},{"name":"upregulation of triacylglycerol transport","type":"exact"},{"name":"upregulation of triglyceride transport","type":"exact"}],"termid":"GO:1905885"}


id: PBO:0089506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1","termid":"PBO:0089506"}


id: PBO:0081039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 15","termid":"PBO:0081039"}


id: PBO:0056162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 1 like 1","termid":"PBO:0056162"}


id: PBO:0060604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit H2","termid":"PBO:0060604"}


id: RO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"RO:0002427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated_by","termid":"RO:0002334"}


id: PBO:0062298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 9","termid":"PBO:0062298"}


id: PR:000050398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, PR:000026291.","definition_xrefs":["PMID:23333317","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/UnPhos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom-cut12/UnPhos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, PR:000026291","type":"narrow"},{"name":"cut12/UnPhos(T75,T78)","type":"exact"}],"termid":"PR:000050398"}


id: GO:0035038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the haploid nucleus of the unfertilized egg.","definition_xrefs":["GOC:bf","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"female pronucleus assembly","termid":"GO:0035038"}


id: GO:0003255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of an endocardial precursor cell. A endocardial precursor cell is a cell that has been committed to a endocardial cell fate, but will undergo further cell divisions rather than terminally differentiate.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial precursor cell differentiation","termid":"GO:0003255"}


id: GO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell becomes committed to becoming a CD4-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"is_a","term_name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","termid":"GO:0043369"},{"relation_name":"part_of","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD4-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0043373"}


id: PBO:0001772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph3 (predicted)","termid":"PBO:0001772"}


id: GO:0045224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD4 production","termid":"GO:0045223"},{"relation_name":"positively_regulates","term_name":"CD4 biosynthetic process","termid":"GO:0045222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4 production","synonyms":[{"name":"activation of CD4 biosynthetic process","type":"narrow"},{"name":"positive regulation of CD4 anabolism","type":"exact"},{"name":"positive regulation of CD4 biosynthesis","type":"exact"},{"name":"positive regulation of CD4 biosynthetic process","type":"exact"},{"name":"positive regulation of CD4 formation","type":"exact"},{"name":"positive regulation of CD4 synthesis","type":"exact"},{"name":"stimulation of CD4 biosynthetic process","type":"narrow"},{"name":"up regulation of CD4 biosynthetic process","type":"exact"},{"name":"up-regulation of CD4 biosynthetic process","type":"exact"},{"name":"upregulation of CD4 biosynthetic process","type":"exact"}],"termid":"GO:0045224"}


id: GO:0080133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of an alkane to a secondary alcohol.","definition_xrefs":["PMID:17905869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"midchain alkane hydroxylase activity","termid":"GO:0080133"}


id: PBO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function depends on a functional spindle assembly checkpoint","termid":"PBO:0001387"}


id: PR:Q09742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12C2.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.01c","synonyms":[{"name":"Spom972h-SPBC12C2.01c","type":"exact"}],"termid":"PR:Q09742"}


id: PBO:0055336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2764","termid":"PBO:0055336"}


id: PBO:0030982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0030982"}


id: GO:0140525
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pole of the kinetoplast associated with kinetoplast DNA replication. The antipodal sites flank the kinetoplast DNA disk and are positioned approximately 180 degrees apart. In Trypanosoma brucei and Crithidia fasciculata, minicircles are attached at antipodal sites and they contain enzymes that catalyse some of the later reactions in minicircle replication.","definition_xrefs":["PMID:17462016","PMID:12455998","PMID:8045928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetoplast","termid":"GO:0020023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"antipodal site","synonyms":[{"name":"antipodal zone","type":"exact"}],"termid":"GO:0140525"}


id: PBO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof5","termid":"PBO:0001702"}


id: PBO:0063546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet and endothelial cell adhesion molecule 1","termid":"PBO:0063546"}


id: PBO:0057619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1184-2","termid":"PBO:0057619"}


id: PBO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.50","termid":"PBO:0002442"}


id: PBO:0088462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase","termid":"PBO:0088462"}


id: GO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a neuron cell soma closest to the point where the basilar dendrite emerges.","definition_xrefs":["NIF_Subcellular:sao1186862860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal pole of neuron","termid":"GO:0044226"}


id: GO:1905760
data:
  {"annotated_genes":["SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86915],"is_not":false,"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a post-anaphase array microtubule.","definition_xrefs":["PMID:11007487","GOC:TermGenie","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"post-anaphase array microtubule","termid":"GO:1905759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"post-anaphase array microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule end of microtubule of PAA","type":"exact"},{"name":"microtubule end of microtubule of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubule of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of microtubuli of PAA","type":"exact"},{"name":"microtubule end of microtubuli of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubuli of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of microtubulus of PAA","type":"exact"},{"name":"microtubule end of microtubulus of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubulus of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of neurotubule of PAA","type":"narrow"},{"name":"microtubule end of neurotubule of post-anaphase array","type":"narrow"},{"name":"microtubule end of neurotubule of post-anaphase microtubule array","type":"narrow"},{"name":"microtubule end of post-anaphase array microtubule","type":"exact"}],"termid":"GO:1905760","terms_by_termid":{"GO:1905760":null}}


