# terms

id: PBO:0110068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol pyrophosphatase Siw14","termid":"PBO:0110068"}


id: GO:0106050
data:
  {"annotated_genes":["SJAG_01269","SJAG_01375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86475,93571],"is_not":false,"summary":null,"term":"GO:0106050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing a 2'-O-nucleotide.","definition_xrefs":["PMID:17242307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_01375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0140101","GO:0016741","GO:0140098","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9024159","Reactome:R-HSA-6788668","Reactome:R-HSA-6788684"],"termid":"GO:0106050","terms_by_termid":{"GO:0106050":null}}


id: PBO:0080715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN RecQ like helicase","termid":"PBO:0080715"}


id: PBO:0031207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization","termid":"PBO:0031207"}


id: PBO:0005771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CTD-binding SR-like protein rA9 homolog (predicted)","termid":"PBO:0005771"}


id: PBO:0051780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing C","termid":"PBO:0051780"}


id: PBO:0040588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACE2 intronic transcript 1","termid":"PBO:0040588"}


id: PBO:0082324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress","termid":"PBO:0082324"}


id: GO:0071976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility that results in the smooth movement of a cell along a solid surface.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell gliding","synonyms":[{"name":"cell gliding motility","type":"exact"}],"termid":"GO:0071976"}


id: PATO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000508 relative sensitivity value (obsolete PATO:0000508)","termid":"PATO:0000508"}


id: MOD:00467
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an iminobiotinyl group for a hydrogen atom.","definition_xrefs":["PubMed:9750125","Unimod:89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iminobiotinyl modified residue","synonyms":[{"name":"Iminobiotin","type":"related"},{"name":"Iminobiotinylation","type":"related"}],"termid":"MOD:00467"}


id: GO:0048378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048378"}


id: PR:P0C016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi3 gene.","definition_xrefs":["UniProtKB:P0C016","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-40S ribosomal protein S27a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.11c","synonyms":[{"name":"Spom972h-ubi3","type":"exact"}],"termid":"PR:P0C016"}


id: PBO:0062938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 3","termid":"PBO:0062938"}


id: PBO:0108942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 21","termid":"PBO:0108942"}


id: RO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with","termid":"RO:0002434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetically_interacts_with","termid":"RO:0002435"}


id: PBO:0084929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA binding protein, member of the CCCH zinc finger family; similar to mammalian Tis11 protein, which activates transcription and also has a role in mRNA degradation; functions with Tis11p in regulation of iron homeostasis; CTH1 has a paralog, TIS11, that arose from the whole genome duplication","termid":"PBO:0084929"}


id: RO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between a disease or an organism and a phenotype","direct_ancestors":[{"relation_name":"is_a","term_name":"has_phenotype","termid":"RO:0002200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_symptom","termid":"RO:0002452"}


id: FYPO:0001495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable, is elongated, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000004","FYPO:0000005","FYPO:0000032"],"is_obsolete":false,"name":"viable elongated multinucleate vegetative cell","synonyms":[{"name":"elongated multinucleate viable cell during vegetative growth","type":"exact"},{"name":"elongated multinucleate viable vegetative cell","type":"exact"},{"name":"viable elongated multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001495"}


id: PBO:0054821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2234","termid":"PBO:0054821"}


id: GO:0009432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An error-prone process for repairing damaged microbial DNA.","definition_xrefs":["PMID:16000023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"},{"relation_name":"is_a","term_name":"cellular response to extracellular stimulus","termid":"GO:0031668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SOS response","secondary_identifiers":["Wikipedia:SOS_response"],"termid":"GO:0009432"}


id: GO:1903562
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97219],"is_not":false,"summary":null,"term":"GO:1903562"}]},"cv_name":"biological_process","definition":"Any microtubule bundle formation that is involved in spindle midzone assembly involved in mitosis.","definition_xrefs":["GOC:TermGenie","PMID:15647375","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle formation","termid":"GO:0001578"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"},{"relation_name":"part_of","term_name":"mitotic spindle midzone assembly","termid":"GO:0051256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0008150","GO:0007010","GO:0007049","GO:0000070"],"is_obsolete":false,"name":"microtubule bundle formation involved in mitotic spindle midzone assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule bundle formation involved in mitotic spindle midzone formation","type":"exact"},{"name":"microtubule bundle formation involved in spindle midzone assembly involved in mitosis","type":"exact"},{"name":"microtubule bundling involved in mitotic spindle midzone assembly","type":"related"},{"name":"microtubule bundling involved in mitotic spindle midzone formation","type":"exact"},{"name":"microtubule bundling involved in spindle midzone assembly involved in mitosis","type":"exact"},{"name":"microtubule bundling involved in spindle midzone biogenesis involved in mitosis","type":"exact"},{"name":"microtubule bundling involved in spindle midzone formation involved in mitosis","type":"exact"}],"termid":"GO:1903562","terms_by_termid":{"GO:1903562":null}}


id: GO:0038076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in innate immune response (obsolete GO:0038076)","synonyms":[{"name":"MAP2K activity involved in innate immune response","type":"exact"},{"name":"MAPKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038076"}


id: PBO:0017866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug168","termid":"PBO:0017866"}


id: PBO:0072365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 51","termid":"PBO:0072365"}


id: FYPO:0006413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells). Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of histone gene mRNA during vegetative growth","synonyms":[{"name":"increased histone gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of histone gene RNA during vegetative growth","type":"exact"},{"name":"increased level of histone gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of histone gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0006413"}


id: MOD:00071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N,N,N-trimethyl-L-alanine.","definition_xrefs":["PubMed:12590383","PubMed:332162","PubMed:3979397","PubMed:6778808","RESID:AA0062","PubMed:7715456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-alanine","synonyms":[{"name":"(1S)-1-carboxy-N,N,N-trimethylethanaminium","type":"exact"},{"name":"(1S)-1-carboxy-N,N,N-trimethylethanazanium","type":"exact"},{"name":"(2S)-2-(trimethylammonio)propanoic acid","type":"exact"},{"name":"MOD_RES N,N,N-trimethylalanine","type":"exact"},{"name":"N,N,N-trimethyl-L-alanine","type":"exact"},{"name":"N,N,N-trimethylalanine cation","type":"exact"},{"name":"N,N,N-trimethylalaninium","type":"exact"},{"name":"N,N,N-trimethylated L-alanine","type":"exact"},{"name":"N2Me3+Ala","type":"exact"},{"name":"NMe3Ala","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00071"}


id: GO:0000132
data:
  {"annotated_genes":["SJAG_02737","SJAG_00140","SJAG_02695","SJAG_02040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84078,90876,92676,113042],"is_not":false,"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitotic spindle localization","termid":"GO:0040001"},{"relation_name":"is_a","term_name":"establishment of spindle orientation","termid":"GO:0051294"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_02040":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0051179","GO:0007163","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"establishment of mitotic spindle orientation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030607","GO:0030609"],"synonyms":[{"name":"establishment of spindle orientation during mitosis","type":"related"},{"name":"establishment of spindle orientation involved in mitotic cell cycle","type":"exact"},{"name":"mitotic spindle orientation","type":"exact"},{"name":"orienting of mitotic spindle","type":"exact"}],"termid":"GO:0000132","terms_by_termid":{"GO:0000132":null}}


id: GO:0140928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of non-mineral tissue, by preventing mineralization of non-skeletal tissue.","definition_xrefs":["PMID:21490328","PMID:30030150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibition of non-skeletal tissue mineralization","synonyms":[{"name":"inhibition of ectopic tissue mineralization","type":"narrow"}],"termid":"GO:0140928"}


id: PBO:0074449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival of motor neuron 1, telomeric","termid":"PBO:0074449"}


id: PBO:0062508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily H member 3","termid":"PBO:0062508"}


id: GO:2000536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of entry of bacterium into host cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of entry of bacterium into host cell","termid":"GO:2000535"},{"relation_name":"negatively_regulates","term_name":"entry of bacterium into host cell","termid":"GO:0035635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of entry of bacterium into host cell","synonyms":[{"name":"negative regulation of bacterial entry into host cell","type":"exact"},{"name":"negative regulation of invasion of bacteria into host cell","type":"exact"}],"termid":"GO:2000536"}


id: PBO:0079424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 7","termid":"PBO:0079424"}


id: PBO:0045083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like non-canonical Notch ligand 2","termid":"PBO:0045083"}


id: GO:1904325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["PMID:15937517","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"positively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"activation of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"positive regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"upregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904325"}


id: PBO:0080910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAH antisense RNA 1","termid":"PBO:0080910"}


id: PBO:0061673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 58 pseudogene 1","termid":"PBO:0061673"}


id: GO:0005745
data:
  {"annotated_genes":["SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106941],"is_not":false,"summary":null,"term":"GO:0005745"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane that is involved in mitochondrial protein turnover and in processing of proteins imported into mitochondria.","definition_xrefs":["GOC:mcc","PMID:12417197","PMID:21147776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"m-AAA complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005745","terms_by_termid":{"GO:0005745":null}}


id: PBO:0085363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylaminoimidazole carboxylase; catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway; red pigment accumulates in mutant cells deprived of adenine","termid":"PBO:0085363"}


id: PBO:0002986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (predicted)","termid":"PBO:0002986"}


id: PBO:0087418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 8 of the F0 sector of mitochondrial F1F0 ATP synthase; encoded on the mitochondrial genome; ATP8 and ATP6 mRNAs are not translated in the absence of the F1 sector of ATPase","termid":"PBO:0087418"}


id: FYPO:0007907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal when a cell is subject to amino acid starvation.","definition_xrefs":["PMID:34805795nPomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during amino acid starvation","termid":"FYPO:0007907"}


id: PBO:0059312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L52","termid":"PBO:0059312"}


id: PBO:0073933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 6","termid":"PBO:0073933"}


id: GO:1905023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of threonine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:8049265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"},{"relation_name":"is_a","term_name":"regulation of aminoacyl-tRNA ligase activity","termid":"GO:1903630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of threonine-tRNA ligase activity","synonyms":[{"name":"activation of L-threonine:tRNAThr ligase (AMP-forming)","type":"narrow"},{"name":"activation of TRS","type":"related"},{"name":"activation of threonine translase activity","type":"narrow"},{"name":"activation of threonine-tRNA ligase activity","type":"narrow"},{"name":"activation of threonine-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of threonyl ribonucleic synthetase activity","type":"narrow"},{"name":"activation of threonyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of TRS","type":"related"},{"name":"positive regulation of threonine translase activity","type":"exact"},{"name":"positive regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"up regulation of TRS","type":"related"},{"name":"up regulation of threonine translase activity","type":"exact"},{"name":"up regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"up regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"up regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of TRS","type":"related"},{"name":"up-regulation of threonine translase activity","type":"exact"},{"name":"up-regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"upregulation of TRS","type":"related"},{"name":"upregulation of threonine translase activity","type":"exact"},{"name":"upregulation of threonine-tRNA ligase activity","type":"exact"},{"name":"upregulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"upregulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905023"}


id: GO:1903342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25103240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation","termid":"GO:1903341"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic DNA double-strand break formation","synonyms":[{"name":"down regulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"down-regulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"downregulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"inhibition of meiotic DNA double-strand break formation","type":"narrow"}],"termid":"GO:1903342"}


id: GO:0070135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["GOC:mah","PMID:18234669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"beta-1,2-oligomannoside metabolic process","synonyms":[{"name":"beta-1,2-oligomannoside metabolism","type":"exact"}],"termid":"GO:0070135"}


id: PBO:0051594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 21 receptor","termid":"PBO:0051594"}


id: PBO:0001732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi2","termid":"PBO:0001732"}


id: GO:0030879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk. Its development starts with the formation of the mammary line and ends as the mature gland cycles between nursing and weaning stages.","definition_xrefs":["PMID:9576833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland development","synonyms":[{"name":"mammogenesis","type":"narrow"}],"termid":"GO:0030879"}


id: PBO:0054927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2341","termid":"PBO:0054927"}


id: GO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + hydrogen peroxide.","definition_xrefs":["RHEA:40459","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pristanoyl-CoA oxidase activity","secondary_identifiers":["Reactome:R-HSA-389889","Reactome:R-HSA-389891"],"termid":"GO:0016402"}


id: FYECO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature followed by growth at standard temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, low to high","termid":"FYECO:0000293"}


id: GO:0009203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside triphosphate catabolic process","synonyms":[{"name":"ribonucleoside triphosphate breakdown","type":"exact"},{"name":"ribonucleoside triphosphate catabolism","type":"exact"},{"name":"ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009203"}


id: GO:0018642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition or substitution of an OH group on C4 of a halogenated phenol.","definition_xrefs":["UM-BBD_enzymeID:e0252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"chlorophenol 4-monooxygenase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0018642"}


id: PBO:0091050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiator methionine tRNA 2'-O-ribosyl phosphate transferase","termid":"PBO:0091050"}


id: PBO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 1","termid":"PBO:0045006"}


id: PR:O94633
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dpm3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1677.02","synonyms":[{"name":"DPM synthase complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPD synthase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dpm3","type":"exact"},{"name":"dolichol-phosphate mannose synthase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-phosphate beta-D-mannosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mannose-P-dolichol synthase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94633"}


id: PBO:0040962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 33","termid":"PBO:0040962"}


id: PBO:0050148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 4","termid":"PBO:0050148"}


id: RO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","termid":"RO:0002328"}


id: PBO:0055891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 10","termid":"PBO:0055891"}


id: GO:0061569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into UDP, uridine diphosphate, to produce UTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP phosphorylation (obsolete GO:0061569)","termid":"GO:0061569"}


id: GO:1990819
data:
  {"annotated_genes":["SJAG_01171","SJAG_02718","SJAG_05001","SJAG_03646","SJAG_00938","SJAG_01943","SJAG_01017","SJAG_03444","SJAG_04887","SJAG_02486","SJAG_03011","SJAG_00677","SJAG_03453","SJAG_04781","SJAG_00667","SJAG_01888","SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83753,84590,86373,88072,89454,89652,90954,91036,95286,95889,97736,97737,103984,104047,107275,110679,112261,115701],"is_not":false,"summary":null,"term":"GO:1990819"}]},"cv_name":"cellular_component","definition":"A focus at the mating projection tip where the cell wall is degraded during conjugation with cellular fusion. Actin filaments form an aster-like structure from this location.","definition_xrefs":["PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_02486":null,"SJAG_02718":null,"SJAG_03011":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03646":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"mating projection actin fusion focus","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"actin fusion focus","type":"broad"}],"termid":"GO:1990819","terms_by_termid":{"GO:1990819":null}}


id: GO:0047809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + A = AH(2) + pyruvate.","definition_xrefs":["EC:1.1.99.6","RHEA:15089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-2-hydroxy-acid dehydrogenase activity","secondary_identifiers":["MetaCyc:D-2-HYDROXY-ACID-DEHYDROGENASE-RXN","KEGG_REACTION:R00297"],"synonyms":[{"name":"(R)-2-hydroxy-acid:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"2-hydroxy acid dehydrogenase activity","type":"related"}],"termid":"GO:0047809"}


id: PBO:0060409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 30, NatC catalytic subunit","termid":"PBO:0060409"}


id: FYPO:0007153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the breakdown of polyphosphate is normal (i.e. indistinguishable from wild type) during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah","PMID:1318242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal polyphosphate catabolism during cellular response to phosphate starvation","synonyms":[{"name":"normal polyphosphate catabolic process during cellular response to phosphate starvation","type":"exact"},{"name":"normal polyphosphate catabolism during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"normal polyphosphate catabolism during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"normal polyphosphate degradation during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0007153"}


id: PR:Q09814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tgs1 gene.","definition_xrefs":["UniProtKB:Q09814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylguanosine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.15c","synonyms":[{"name":"Spom972h-tgs1","type":"exact"},{"name":"cap-specific guanine-N2 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snRNA/snoRNA cap hypermethylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09814"}


id: PBO:0031732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis","termid":"PBO:0031732"}


id: PBO:0054985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2399","termid":"PBO:0054985"}


id: PBO:0040543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GAT1 divergent transcript","termid":"PBO:0040543"}


id: PBO:0070078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 35, pseudogene","termid":"PBO:0070078"}


id: GO:0016855
data:
  {"annotated_genes":["SJAG_00036","SJAG_04298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113450,88028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036361"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00036":null,"SJAG_04298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on amino acids and derivatives","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.1.1.-"],"termid":"GO:0016855","terms_by_termid":{"GO:0036361":null}}


id: _global:has_cross_section
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_cross_section","termid":"_global:has_cross_section"}


id: PBO:0079064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 4-1","termid":"PBO:0079064"}


id: PBO:0003757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Scr1","termid":"PBO:0003757"}


id: PBO:0080931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 9","termid":"PBO:0080931"}


id: PBO:0029174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptide-glutamate-N-acetyltransferase_activity","termid":"PBO:0029174"}


id: FYPO:0003672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ATP binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ATP binding","termid":"FYPO:0003671"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished ATP binding","synonyms":[{"name":"ATP binding abolished","type":"exact"}],"termid":"FYPO:0003672"}


id: FYPO:0006584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to shmoo tip membrane","synonyms":[{"name":"abnormal protein localisation to shmoo tip membrane","type":"exact"},{"name":"abnormal protein localization to mating projection tip membrane","type":"exact"},{"name":"abnormal protein localization to plasma membrane at shmoo tip","type":"exact"},{"name":"abnormal protein localization to shmoo membrane fusion domain","type":"exact"},{"name":"abnormal protein localization to shmoo projection membrane","type":"related"}],"termid":"FYPO:0006584"}


id: GO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by Sec complex (obsolete GO:0085011)","synonyms":[{"name":"interaction with host via protein secreted by Sec secretion system","type":"exact"}],"termid":"GO:0085011"}


id: PBO:0043894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 1","termid":"PBO:0043894"}


id: PBO:0088922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm1","termid":"PBO:0088922"}


id: FYPO:0006873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cell cortex at one or both cell tips is observed there.","definition_xrefs":["PMID:17895368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cell tip","termid":"FYPO:0003527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to cell cortex of cell tip","synonyms":[{"name":"ectopic protein localization to cell cortex of cell tip","type":"exact"},{"name":"protein mislocalised to cell cortex of cell tip","type":"exact"},{"name":"protein mislocalised to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell cortex of cell end","type":"exact"},{"name":"protein mislocalized to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell tip cortex","type":"exact"}],"termid":"FYPO:0006873"}


id: PR:Q92462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pub1 gene.","definition_xrefs":["UniProtKB:Q92462","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.02","synonyms":[{"name":"Spom972h-pub1","type":"exact"}],"termid":"PR:Q92462"}


id: PBO:0051186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-79 (pseudogene)","termid":"PBO:0051186"}


id: PR:O94419
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1620.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein C1620.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.12c","synonyms":[{"name":"Spom972h-SPCC1620.12c","type":"exact"}],"termid":"PR:O94419"}


id: GO:0004421
data:
  {"annotated_genes":["SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93762],"is_not":false,"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetyl-CoA + acetyl-CoA + H2O = (S)-3-hydroxy-3-methylglutaryl-CoA + CoA + H+.","definition_xrefs":["RHEA:10188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN","KEGG_REACTION:R01978","Reactome:R-HSA-191323","Reactome:R-HSA-73918","EC:2.3.3.10"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA-acetylating)","type":"related"},{"name":"(s)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA- acetylating) activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-coenzyme A synthase activity","type":"related"},{"name":"HMG-CoA synthase activity","type":"related"},{"name":"acetoacetyl coenzyme A transacetase activity","type":"related"},{"name":"acetyl-CoA:acetoacetyl-CoA C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-condensing enzyme","type":"related"},{"name":"hydroxymethylglutaryl coenzyme alpha-condensing enzyme activity","type":"related"}],"termid":"GO:0004421","terms_by_termid":{"GO:0004421":null}}


id: GO:0030515
data:
  {"annotated_genes":["SJAG_04424","SJAG_05186","SJAG_04754","SJAG_02608","SJAG_03028","SJAG_02377","SJAG_02662","SJAG_00566","SJAG_03846","SJAG_04908","SJAG_02702","SJAG_04069","SJAG_00559","SJAG_02530","SJAG_00945","SJAG_05187","SJAG_03569","SJAG_01764","SJAG_03252","SJAG_03156","SJAG_00897","SJAG_01907","SJAG_02372","SJAG_02300","SJAG_00744","SJAG_00344","SJAG_03341","SJAG_03125","SJAG_03654","SJAG_00572","SJAG_01234","SJAG_00083","SJAG_04224","SJAG_02025","SJAG_04339","SJAG_00879"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84741,86848,87048,87224,87597,88199,89760,94259,96530,97357,98937,101855,102094,102858,102995,103955,104527,105663,105916,106042,106517,107008,107312,107750,107976,109576,109965],"is_not":false,"summary":null,"term":"GO:0030515"},{"annotations":[91028,96950,102167,85532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034513"},{"annotations":[111824,89967,111263,91409,104631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034511"}]},"cv_name":"molecular_function","definition":"Binding to a small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00344":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00572":null,"SJAG_00744":null,"SJAG_00879":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_01234":null,"SJAG_01764":null,"SJAG_01907":null,"SJAG_02025":null,"SJAG_02300":null,"SJAG_02372":null,"SJAG_02377":null,"SJAG_02530":null,"SJAG_02608":null,"SJAG_02662":null,"SJAG_02702":null,"SJAG_03028":null,"SJAG_03125":null,"SJAG_03156":null,"SJAG_03252":null,"SJAG_03341":null,"SJAG_03569":null,"SJAG_03654":null,"SJAG_03846":null,"SJAG_04069":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04424":null,"SJAG_04754":null,"SJAG_04908":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snoRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030515","terms_by_termid":{"GO:0030515":null,"GO:0034511":null,"GO:0034513":null}}


id: GO:0047002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-ribulose + H+ + NADH.","definition_xrefs":["RHEA:21356","EC:1.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.13-RXN","KEGG_REACTION:R02441"],"synonyms":[{"name":"L-arabinitol 2-dehydrogenase (ribulose forming) activity","type":"exact"}],"termid":"GO:0047002"}


id: PBO:0079368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 2","termid":"PBO:0079368"}


id: GO:0046365
data:
  {"annotated_genes":["SJAG_03373","SJAG_01209","SJAG_02135","SJAG_04660","SJAG_03958","SJAG_04495","SJAG_02107","SJAG_03660","SJAG_01310","SJAG_00605","SJAG_02009","SJAG_04276","SJAG_03903","SJAG_03828","SJAG_04192","SJAG_06621","SJAG_02010","SJAG_02369","SJAG_00027","SJAG_00839","SJAG_04334","SJAG_06622","SJAG_02945","SJAG_00461","SJAG_02796","SJAG_03174"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96964,90681,91432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[93714,99209,105324,105325,105328,105329,101697,104855,101307,105326,112440,105323,104851,101309,101308,104850,93994,101698,104853,104854,105327,100310,104852,99478,104856,90676,90172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[91433,90683,96965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[104822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"},{"annotations":[115113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01209":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03174":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide degradation","type":"exact"},{"name":"monosaccharide breakdown","type":"exact"},{"name":"monosaccharide catabolism","type":"exact"}],"termid":"GO:0046365","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019388":null,"GO:0019568":null,"GO:0042843":null,"GO:0061621":null}}


id: PBO:0012535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_acquisition_of_features_of","termid":"PBO:0012535"}


id: PBO:0081227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 6","termid":"PBO:0081227"}


id: GO:0010062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that suppresses trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"negative regulation of plant epidermal cell differentiation","termid":"GO:1903889"},{"relation_name":"negatively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trichoblast fate specification","synonyms":[{"name":"down regulation of trichoblast fate","type":"exact"},{"name":"down-regulation of trichoblast fate","type":"exact"},{"name":"downregulation of trichoblast fate","type":"exact"},{"name":"inhibition of trichoblast fate","type":"narrow"}],"termid":"GO:0010062"}


id: PBO:0053798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1053","termid":"PBO:0053798"}


id: PBO:0109053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule associated protein 2 like","termid":"PBO:0109053"}


id: GO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The leaf morphogenesis process that results in the shaping of a compound leaf. A compound leaf is a leaf having two or more distinct leaflets that are evident as such from early in development.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaf morphogenesis","termid":"GO:0009965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound leaf morphogenesis","termid":"GO:0060777"}


id: PR:Q9P7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase copper chaperone that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16719:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.14c","secondary_identifiers":["UniProtKB:Q9P7Z7"],"synonyms":[{"name":"SPBC26H8.14c","type":"related"},{"name":"Spom972h-COX17","type":"exact"}],"termid":"PR:Q9P7Z7"}


id: GO:0033555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal response to stress","termid":"GO:0033555"}


id: FYPO:0005759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late-firing replication origins is increased.","definition_xrefs":["PomBase:mah","PMID:22987637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at replication origin","termid":"FYPO:0004961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at late replication origin","synonyms":[{"name":"increased protein localisation to chromatin at late replication origin","type":"exact"},{"name":"increased protein localization to chromatin at late origin","type":"exact"},{"name":"increased protein localization to chromatin at late replication origins during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at late replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0005759"}


id: PBO:0048359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 70","termid":"PBO:0048359"}


id: PBO:0004734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R68 (predicted)","termid":"PBO:0004734"}


id: GO:0097352
data:
  {"annotated_genes":["SJAG_02414","SJAG_06309","SJAG_00390","SJAG_02433","SJAG_02699","SJAG_00974","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83684,84762,85600,107017,109690],"is_not":false,"summary":null,"term":"GO:0097352"},{"annotations":[90275],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[93336],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Removal of PI3P and Atg8/LC3 after the closure of the phagophore and before the fusion with the endosome/lysosome (e.g. mammals and insects) or vacuole (yeast), and that very likely destabilizes other Atg proteins and thus enables their efficient dissociation and recycling.","definition_xrefs":["PMID:28077293","GOC:autophagy","GOC:lf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00390":null,"SJAG_00974":null,"SJAG_02414":null,"SJAG_02433":null,"SJAG_02699":null,"SJAG_03345":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000046"],"synonyms":[{"name":"autophagic vacuole fusion","type":"exact"},{"name":"autophagic vacuole maturation","type":"exact"},{"name":"autophagosome fusion","type":"related"}],"termid":"GO:0097352","terms_by_termid":{"GO:0016240":null,"GO:0097352":null,"GO:1901098":null}}


id: GO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus morphogenesis","termid":"GO:0060434"}


id: PBO:0056650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 17","termid":"PBO:0056650"}


id: PR:G2TRL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B2.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.06","synonyms":[{"name":"Spom972h-SPAC1B2.06","type":"exact"}],"termid":"PR:G2TRL6"}


id: PBO:0076561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3B","termid":"PBO:0076561"}


id: PBO:0057578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 875","termid":"PBO:0057578"}


id: GO:0060892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an limb basal epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell fate specification","termid":"GO:0009957"},{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"limb epidermis stratification","termid":"GO:0060888"},{"relation_name":"part_of","term_name":"limb basal epidermal cell differentiation","termid":"GO:0060889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb basal epidermal cell fate specification","termid":"GO:0060892"}


id: RO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Is_bouton_to","termid":"RO:0002106"}


id: PATO:0001926
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence which is higher than normal.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fluorescent","termid":"PATO:0001290"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fluorescence","synonyms":[{"name":"high fluorescence","type":"exact"}],"termid":"PATO:0001926"}


id: PBO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-Syndromic X-Linked Intellectual Disability","termid":"PBO:0024478"}


id: PR:P27638
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P27638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase spk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.09c","synonyms":[{"name":"MAP kinase spk1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spk1","type":"exact"}],"termid":"PR:P27638"}


id: MOD:01501
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["Unimod:214#K","OMSSA:174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ116K","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01501"}


id: SO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methylcytidine","secondary_identifiers":["RNAMOD:020"],"synonyms":[{"name":"3-methylcytidine","type":"exact"},{"name":"m3C","type":"exact"},{"name":"three methylcytidine","type":"exact"}],"termid":"SO:0001281"}


id: GO:1904797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of core promoter binding.","definition_xrefs":["PMID:22723415","GOC:nc","GOC:BHF_telomere","GO_REF:0000059","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of core promoter binding","termid":"GO:1904796"},{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of core promoter binding","synonyms":[{"name":"down regulation of core promoter binding","type":"exact"},{"name":"down-regulation of core promoter binding","type":"exact"},{"name":"downregulation of core promoter binding","type":"exact"},{"name":"inhibition of core promoter binding","type":"narrow"}],"termid":"GO:1904797"}


id: GO:0035433
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67483],"is_not":false,"summary":null,"term":"GO:0035433"},{"annotations":[94435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The process in which acetate is transported across a membrane. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate transport","termid":"GO:0006846"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"acetate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"acetate membrane transport","type":"exact"}],"termid":"GO:0035433","terms_by_termid":{"GO:0006847":null,"GO:0035433":null}}


id: PR:A6X993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C338.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.03c","synonyms":[{"name":"Spom972h-SPCC338.03c","type":"exact"}],"termid":"PR:A6X993"}


id: PBO:0064443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC1 centriolar protein B","termid":"PBO:0064443"}


id: PBO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X3-C motif chemokine ligand 1","termid":"PBO:0044256"}


id: PBO:0038590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 9","termid":"PBO:0038590"}


id: PBO:0050799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 7","termid":"PBO:0050799"}


id: GO:2000609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of nitrogen compound metabolic process","termid":"GO:0051171"},{"relation_name":"regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid hormone generation","termid":"GO:2000609"}


id: FYPO:0005200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to UV (obsolete FYPO:0005200)","synonyms":[{"name":"elongated inviable cell during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell during cellular response to ultraviolet light","type":"exact"},{"name":"lethal; elongated vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005200"}


id: GO:0018352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and pyridoxal-5-phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}


id: GO:0046178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"D-gluconate metabolic process","termid":"GO:0019521"},{"relation_name":"is_a","term_name":"aldonic acid biosynthetic process","termid":"GO:0046175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-gluconate biosynthetic process","synonyms":[{"name":"D-gluconate anabolism","type":"exact"},{"name":"D-gluconate biosynthesis","type":"exact"},{"name":"D-gluconate formation","type":"exact"},{"name":"D-gluconate synthesis","type":"exact"}],"termid":"GO:0046178"}


id: GO:0036352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of ubiquitin group at lysine 15 (H2A-K15) in metazoans, and at the equivalent residue in other organisms. Monoubiquitin is first attached to H2A-K15 and K63-linked ubiquitin chains are then extended from this monoubiquitin.","definition_xrefs":["PMID:22980979","PMID:22713238","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K15 ubiquitination (obsolete GO:0036352)","synonyms":[{"name":"histone H2A ubiquitination (H2A-K15)","type":"exact"}],"termid":"GO:0036352"}


id: PBO:0052096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 13","termid":"PBO:0052096"}


id: GO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"basement membrane assembly","termid":"GO:0070831"}


id: GO:1903565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:krc","PMID:22072986","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cilium","synonyms":[{"name":"down regulation of protein localization to cilium","type":"exact"},{"name":"down-regulation of protein localization to cilium","type":"exact"},{"name":"downregulation of protein localization to cilium","type":"exact"},{"name":"inhibition of protein localization to cilium","type":"narrow"}],"termid":"GO:1903565"}


id: GO:0036158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal dynein outer arm, an outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes.","definition_xrefs":["GOC:BHF","PMID:19944400","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex assembly","termid":"GO:0070286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"outer dynein arm assembly","synonyms":[{"name":"ODA assembly","type":"exact"}],"termid":"GO:0036158"}


id: PBO:0040594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 2","termid":"PBO:0040594"}


id: GO:2000438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of monocyte extravasation","termid":"GO:2000437"},{"relation_name":"negatively_regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte extravasation","termid":"GO:2000438"}


id: PBO:0065712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvalbumin like EF-hand containing","termid":"PBO:0065712"}


id: PBO:0086142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal actin organization and endocytosis; targeting subunit for protein phosphatase type 1; undergoes Crm1p-dependent nuclear-cytoplasmic shuttling; multicopy suppressor of clathrin deficiency","termid":"PBO:0086142"}


id: PBO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain roadblock-type 1","termid":"PBO:0045690"}


id: PBO:0061858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 2B","termid":"PBO:0061858"}


id: GO:0051599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrostatic pressure stimulus. Hydrostatic pressure is the force acting on an object in a system where the fluid is at rest (as opposed to moving). The weight of the fluid above the object creates pressure on it.","definition_xrefs":["Wikipedia:Hydrostatic_pressure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydrostatic pressure","synonyms":[{"name":"response to biomechanical stress","type":"broad"},{"name":"response to static fluid pressure","type":"exact"}],"termid":"GO:0051599"}


id: GO:0018753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanurate + H2O = 1-carboxybiuret + H+.","definition_xrefs":["EC:3.5.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"cyanuric acid amidohydrolase activity","secondary_identifiers":["RHEA:70363","UM-BBD_reactionID:r0116","MetaCyc:RXN-20062"],"termid":"GO:0018753"}


id: PBO:0067531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 675, pseudogene","termid":"PBO:0067531"}


id: PBO:0050955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma receptor 1","termid":"PBO:0050955"}


id: GO:0010729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:tb","GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide metabolic process","termid":"GO:0010726"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide biosynthetic process","termid":"GO:0010728"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species biosynthetic process","termid":"GO:1903428"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"positive regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010729"}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: PBO:0075718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin","termid":"PBO:0075718"}


id: PBO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit 3","termid":"PBO:0005633"}


id: GO:1901842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of high voltage-gated calcium channel activity.","definition_xrefs":["PMID:12754254","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of voltage-gated calcium channel activity","termid":"GO:1901386"},{"relation_name":"is_a","term_name":"regulation of high voltage-gated calcium channel activity","termid":"GO:1901841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of high voltage-gated calcium channel activity","synonyms":[{"name":"down regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"down regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of high voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"downregulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"inhibition of high voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of high voltage-dependent calcium channel activity","type":"exact"},{"name":"inhibition of high voltage-gated calcium channel activity","type":"narrow"},{"name":"negative regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:1901842"}


id: GO:1903723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of centriole elongation.","definition_xrefs":["GOC:als","PMID:20616062","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centriole elongation","termid":"GO:1903722"},{"relation_name":"negatively_regulates","term_name":"centriole elongation","termid":"GO:0061511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of centriole elongation","synonyms":[{"name":"down regulation of centriole elongation","type":"exact"},{"name":"down-regulation of centriole elongation","type":"exact"},{"name":"downregulation of centriole elongation","type":"exact"},{"name":"inhibition of centriole elongation","type":"narrow"}],"termid":"GO:1903723"}


id: PBO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalase Ntp1","termid":"PBO:0003078"}


id: PBO:0074093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 8","termid":"PBO:0074093"}


id: GO:0018532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N5,N10-methenyltetrahydromethanopterin + H2 = N5,N10-methylenetetrahydromethanopterin.","definition_xrefs":["UM-BBD_reactionID:r0353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity","secondary_identifiers":["EC:1.5.99.-"],"synonyms":[{"name":"F420-independent 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"F420-independent methylene-H4MPT dehydrogenase activity","type":"exact"},{"name":"coenzyme F420-independent 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"coenzyme F420-independent methylene-H4MPT dehydrogenase activity","type":"exact"}],"termid":"GO:0018532"}


id: GO:0052933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome cL] + a primary alcohol = 2 [Fe(II)cytochrome cL] + an aldehyde + 2 H+.","definition_xrefs":["RHEA:51004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alcohol dehydrogenase (cytochrome c(L)) activity","secondary_identifiers":["GO:0052931","KEGG_REACTION:R01146","KEGG_REACTION:R09128","GO:0052930","GO:0052932","KEGG_REACTION:R09127","MetaCyc:RXN-11332","MetaCyc:RXN-2861","EC:1.1.2.7"],"synonyms":[{"name":"2-chloroethanol cytochrome-c oxidoreductase activity","type":"narrow"},{"name":"alcohol:cytochrome c(L) oxidoreductase activity","type":"exact"},{"name":"ethanol cytochrome-c oxidoreductase activity","type":"narrow"},{"name":"methanol dehydrogenase activity","type":"narrow"},{"name":"methanol ferricytochrome-c oxidoreductase activity","type":"narrow"}],"termid":"GO:0052933"}


id: GO:0010203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Very low fluence red light is defined in this case as short pulses of red light followed by darkness, providing light levels of less than 0.001 mmol/m2/sec.","definition_xrefs":["GOC:sm","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"},{"relation_name":"is_a","term_name":"response to very low light intensity stimulus","termid":"GO:0055122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to very low fluence red light stimulus","termid":"GO:0010203"}


id: GO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lutropin-choriogonadotropic hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"lutropin-choriogonadotropic hormone receptor binding","synonyms":[{"name":"lutropin-choriogonadotropic hormone receptor ligand","type":"narrow"}],"termid":"GO:0031775"}


id: PBO:0072070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12","termid":"PBO:0072070"}


id: PBO:0013028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Brr2","termid":"PBO:0013028"}


id: PBO:0073241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 6","termid":"PBO:0073241"}


id: PR:000050503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOG/XMAP215 microtubule plus end tracking polymerase Dis1 that has been phosphorylated at the positions equivalent to Thr-279, Ser-293, Ser-300, Ser-551, Ser-556, and Ser-590 of the amino acid sequence represented by UniProtKB:Q09933. Example: UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046.","definition_xrefs":["PMID:16920624","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","termid":"PR:000050502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis1/Phos(T279,S293,S300,S551,S556,S590)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"Spom-dis1/Phos:1","type":"exact"},{"name":"UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046","type":"narrow"},{"name":"dis1/Phos(T279,S293,S300,S551,S556,S590)","type":"exact"}],"termid":"PR:000050503"}


id: PBO:0066528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 4","termid":"PBO:0066528"}


id: PBO:0034260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-negatively_regulated_by","termid":"PBO:0034260"}


id: PBO:0005555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0005555"}


id: PBO:0047601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 1B","termid":"PBO:0047601"}


id: PBO:0069838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1124, pseudogene","termid":"PBO:0069838"}


id: PBO:0110308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex associated protein (PNUTS)","termid":"PBO:0110308"}


id: PBO:0089647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein","termid":"PBO:0089647"}


id: PBO:0077494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 213","termid":"PBO:0077494"}


id: GO:0006837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transport","termid":"GO:0015844"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"serotonin transport","termid":"GO:0006837"}


id: PR:Q09714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.08c gene.","definition_xrefs":["UniProtKB:Q09714","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.08c","synonyms":[{"name":"Spom972h-SPAC18B11.08c","type":"exact"}],"termid":"PR:Q09714"}


id: PBO:0044368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic FMR1 interacting protein 1","termid":"PBO:0044368"}


id: PBO:0071085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 87","termid":"PBO:0071085"}


id: GO:0097367
data:
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id: GO:0061246
data:
  {"annotated_genes":["SJAG_03581","SJAG_00661","SJAG_01799","SJAG_00236","SJAG_00845","SJAG_02022","SJAG_04461","SJAG_03637","SJAG_00333","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100377],"is_not":false,"summary":null,"term":"GO:0061246"},{"annotations":[95926,89375,99536,101206],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[109072,86667,91343,90231,95929,101209,100381,114874],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a bipolar intracellular organization or cell growth patterns that regulates the shaping of a cell.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of bipolar cell polarity","termid":"GO:0061245"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061246","terms_by_termid":{"GO:0061246":null,"GO:2000100":null,"GO:2000247":null}}


id: GO:1990923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of at least EXD1, TDRD12 and some PIWI protein. The complex is required for MILI slicing-triggered biogenesis and loading of MIWI2 piRNAs.","definition_xrefs":["PMID:26669262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PET complex","termid":"GO:1990923"}


id: GO:0010565
data:
  {"annotated_genes":["SJAG_03130","SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[84692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01672":null,"SJAG_03130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of cellular ketone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010565","terms_by_termid":{"GO:0045717":null,"GO:1904775":null}}


id: PATO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being twisted or turned.","definition_xrefs":["freedictionary:freedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsioned","synonyms":[{"name":"twisted","type":"exact"}],"termid":"PATO:0002445"}


id: PBO:0012842
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renal cell cancer","termid":"PBO:0012842"}


id: PBO:0085862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; CUE4 has a paralog, CUE1, that arose from the whole genome duplication","termid":"PBO:0085862"}


id: GO:0072225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric late distal convoluted tubule over time, from its formation to the mature structure. The metanephric late distal convoluted tubule contains metanephric DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late distal convoluted tubule development","termid":"GO:0072068"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric late distal convoluted tubule development","termid":"GO:0072225"}


id: PBO:0038527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 1","termid":"PBO:0038527"}


id: PBO:0038939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 3","termid":"PBO:0038939"}


id: PBO:0028669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Kms1_foci_during_response_to_DNA_damage","termid":"PBO:0028669"}


id: GO:0034019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: violaxanthin = capsorubin, and antheraxanthin = capsanthin.","definition_xrefs":["EC:5.3.99.8"],"gene_count":0,"genotype_count":0,"name":"obsolete capsanthin/capsorubin synthase activity (obsolete GO:0034019)","synonyms":[{"name":"CCS","type":"related"},{"name":"capsanthin-capsorubin synthase activity","type":"related"},{"name":"capsanthin/capsorubin synthase activity","type":"exact"},{"name":"ketoxanthophyll synthase activity","type":"broad"},{"name":"violaxanthin-capsorubin isomerase (ketone-forming) activity","type":"narrow"}],"termid":"GO:0034019"}


id: PBO:0078087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 4","termid":"PBO:0078087"}


id: GO:0036212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the contractile ring is maintained, typically in response to an internal or external cue.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile ring maintenance (obsolete GO:0036212)","termid":"GO:0036212"}


id: PBO:0078329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-1","termid":"PBO:0078329"}


id: PBO:0088512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family zinc finger, PHD-type","termid":"PBO:0088512"}


id: GO:0033996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructopyranosyl-(2->6)-[D-fructofuranosyl-(2->6)]n-D-fructofuranoside = beta-D-fructopyranosyl-(2->6)-[D-fructofuranosyl-(2->6)](n-1)-D-fructofuranoside + di-beta-D-fructofuranose 2,6':2',6-dianhydride. This reaction is the production of di-beta-D-fructofuranose 2,6':2',6-dianhydride (DFA IV) by successively eliminating the diminishing (2->6)-beta-D-fructan (levan) chain from the terminal D-fructosyl-D-fructosyl disaccharide.","definition_xrefs":["EC:4.2.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"levan fructotransferase (DFA-IV-forming) activity","secondary_identifiers":["MetaCyc:4.2.2.16-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan D-fructosyl-D-fructosyltransferase (forming di-beta-D-fructofuranose 2,6':2',6-dianhydride) activity","type":"related"},{"name":"2,6-beta-D-fructan lyase (di-beta-D-fructofuranose-2,6':2',6-dianhydride-forming) activity","type":"related"},{"name":"levan fructotransferase activity","type":"related"}],"termid":"GO:0033996"}


id: FYPO:0000365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small nucleus","synonyms":[{"name":"size of nucleus: decreased","type":"related"},{"name":"small nuclei","type":"exact"},{"name":"small nucleus during mitotic cell cycle","type":"related"},{"name":"small nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0000365"}


id: GO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"}


id: SO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome variation derived from an event during meiosis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_variation","termid":"SO:0000240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_variation","synonyms":[{"name":"assortment derived variation","type":"related"}],"termid":"SO:0001504"}


id: FYPO:0000504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of necrotic cell death is decreased. Necrotic cell death is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["GO:0070265","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased necrotic cell death (obsolete FYPO:0000504)","synonyms":[{"name":"necrotic cell death: decreased","type":"related"},{"name":"reduced necrotic cell death","type":"exact"}],"termid":"FYPO:0000504"}


id: FYPO:0004080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"increased histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"increased histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3S10 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004080"}


id: SO:1000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An autosynaptic chromosome carrying the two right (D = dextro) telomeres.","definition_xrefs":["FB:manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosynaptic_chromosome","termid":"SO:1000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrosynaptic_chromosome","synonyms":[{"name":"dextrosynaptic chromosome","type":"exact"}],"termid":"SO:1000142"}


id: PBO:0048930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLM2 pseudogene 1","termid":"PBO:0048930"}


id: PBO:0057908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3611","termid":"PBO:0057908"}


id: PBO:0017928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet2","termid":"PBO:0017928"}


id: GO:0141038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a phosphatidylinositol 3-kinase (PI3K).","definition_xrefs":["PMID:31686003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase regulator activity","termid":"GO:0035014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase activator activity","termid":"GO:0141038"}


id: GO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 8.8S rRNA, the 2S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}


id: PBO:0079689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 3","termid":"PBO:0079689"}


id: GO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of adult somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of somatic muscle development","termid":"GO:0062224"},{"relation_name":"is_a","term_name":"regulation of adult somatic muscle development","termid":"GO:0062226"},{"relation_name":"positively_regulates","term_name":"adult somatic muscle development","termid":"GO:0007527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult somatic muscle development","termid":"GO:0062227"}


id: PBO:0049478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.2 linker histone, cluster member","termid":"PBO:0049478"}


id: PBO:0073954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 3","termid":"PBO:0073954"}


id: GO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-phosphate = 1D-myo-inositol 3-phosphate. This reaction requires NAD, which dehydrogenates the CHOH group to CO at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the aldehyde at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the CHOH form.","definition_xrefs":["RHEA:10716","EC:5.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"inositol-3-phosphate synthase activity","secondary_identifiers":["Reactome:R-HSA-1855178","KEGG_REACTION:R07324","MetaCyc:MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN"],"synonyms":[{"name":"1L-myo-inositol-1-phosphate lyase (isomerizing)","type":"related"},{"name":"D-glucose 6-phosphate cycloaldolase activity","type":"related"},{"name":"glucocycloaldolase activity","type":"related"},{"name":"glucose 6-phosphate cyclase activity","type":"related"},{"name":"glucose-6-phosphate inositol monophosphate cycloaldolase activity","type":"related"},{"name":"inositol 1-phosphate synthatase activity","type":"related"},{"name":"inositol 1-phosphate synthetase activity","type":"related"}],"termid":"GO:0004512"}


id: PBO:0060823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 1","termid":"PBO:0060823"}


id: PBO:0049726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 7","termid":"PBO:0049726"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: PBO:0080041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 27","termid":"PBO:0080041"}


id: PBO:0050567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H3","termid":"PBO:0050567"}


id: PBO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family (predicted)","termid":"PBO:0000850"}


id: PBO:0089583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Ell1","termid":"PBO:0089583"}


id: PBO:0031849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spore","termid":"PBO:0031849"}


id: PBO:0050461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hook microtubule tethering protein 2","termid":"PBO:0050461"}


id: GO:0010294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-abscisate + UDP-D-glucose = abscisic acid glucose ester + UDP.","definition_xrefs":["DOI:10.1016/j.tetasy.2004.11.062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"abscisic acid glucosyltransferase activity","secondary_identifiers":["RHEA:31031","MetaCyc:RXN-8155"],"termid":"GO:0010294"}


id: GO:0004194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Preferential cleavage: hydrophobic, preferably aromatic, residues in P1 and P1' positions. Cleaves Phe1-Val2, Gln4-His5, Glu13-Ala14, Ala14-Leu15, Leu15-Tyr16, Tyr16-Leu17, Gly23-Phe24, Phe24-Phe25 and Phe25-Tyr26 bonds in the B chain of insulin.","definition_xrefs":["EC:3.4.23.1"],"gene_count":0,"genotype_count":0,"name":"obsolete pepsin A activity (obsolete GO:0004194)","synonyms":[{"name":"P I","type":"related"},{"name":"P II","type":"related"},{"name":"elixir lactate of pepsin","type":"related"},{"name":"fundus-pepsin","type":"related"},{"name":"lactated pepsin","type":"related"},{"name":"lactated pepsin elixir","type":"related"},{"name":"pepsin A activity","type":"exact"},{"name":"pepsin D","type":"related"},{"name":"pepsin R","type":"related"},{"name":"pepsin activity","type":"broad"},{"name":"pepsin fortior","type":"related"}],"termid":"GO:0004194"}


id: PBO:0082250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the nascent polypeptide-associated complex (NAC); involved in protein sorting and translocation; associated with cytoplasmic ribosomes","termid":"PBO:0082250"}


id: MOD:01623
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a C-terminal 1-thioglycine.","definition_xrefs":["RESID:AA0265#var","PubMed:19145231","PubMed:9367957","PubMed:11463785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-thioglycine","termid":"MOD:01625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-thioglycine (C-terminal)","termid":"MOD:01623"}


id: PR:O59825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G/U mismatch-specific uracil DNA glycosylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.05c","synonyms":[{"name":"Spom972h-thp1","type":"exact"},{"name":"uracil mismatch repair protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59825"}


id: PBO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_beta-glucan_level","termid":"PBO:0030613"}


id: PBO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial citrate transporter (predicted)","termid":"PBO:0002336"}


id: PBO:0005102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid oxidoreductase superfamily protein (predicted)","termid":"PBO:0005102"}


id: PBO:0048142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6","termid":"PBO:0048142"}


id: PBO:0055551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2987","termid":"PBO:0055551"}


id: PBO:0051118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-3 (pseudogene)","termid":"PBO:0051118"}


id: PBO:0084861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit (L2); has similarity to E. coli L2 ribosomal protein; mutant allele (fat21) causes inability to utilize oleate, and induce oleic acid oxidation; may interfere with activity of the Adr1p transcription factor","termid":"PBO:0084861"}


id: PBO:0067812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 114","termid":"PBO:0067812"}


id: PBO:0078318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 3","termid":"PBO:0078318"}


id: PBO:0064581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B3","termid":"PBO:0064581"}


id: PBO:0044546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein 3","termid":"PBO:0044546"}


id: FYPO:0003602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is abolished.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"abolished mRNA splicing, via spliceosome","synonyms":[{"name":"abolished mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abolished mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abolished nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"abolished splicing","type":"broad"},{"name":"mRNA splicing via spliceosome abolished","type":"exact"}],"termid":"FYPO:0003602"}


id: GO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The receptor is defined as a protein on the cell membrane or within the cytoplasm or cell nucleus that binds to a specific molecule (a ligand) such as a neurotransmitter or a hormone or other substance, and initiates the cellular response to the ligand. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075078)","termid":"GO:0075078"}


id: GO:0031162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006790"],"is_obsolete":false,"name":"sulfur incorporation into metallo-sulfur cluster","synonyms":[{"name":"sulphur incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0031162"}


id: GO:0018402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Chondroitin sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.","definition_xrefs":["RESID:AA0208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"chondroitin sulfate metabolic process","termid":"GO:0030204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"protein-chondroitin sulfate linkage via chondroitin sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"protein-chondroitin sulphate linkage via chondroitin sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"}],"termid":"GO:0018402"}


id: PBO:0057567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 762","termid":"PBO:0057567"}


id: PBO:0000891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor protein Ste4","termid":"PBO:0000891"}


id: PBO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 5","termid":"PBO:0046563"}


id: GO:0043610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of carbohydrate utilization.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"carbohydrate utilization","termid":"GO:0009758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of carbohydrate utilization","synonyms":[{"name":"regulation of sugar utilization","type":"narrow"}],"termid":"GO:0043610"}


id: GO:0097507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated adenine (hypoxanthine).","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140097","GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hypoxanthine DNA N-glycosylase activity","synonyms":[{"name":"hypoxanthine-DNA glycosylase activity","type":"related"}],"termid":"GO:0097507"}


id: GO:0005947
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Mitochondrial complex that possesses alpha-ketoglutarate dehydrogenase activity.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial alpha-ketoglutarate dehydrogenase complex (obsolete GO:0005947)","synonyms":[{"name":"2-oxoglutarate dehydrogenase complex","type":"broad"}],"termid":"GO:0005947"}


id: PBO:0028810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028810"}


id: GO:0060091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmotile primary cilium that is found at the apical surface of auditory receptor cells. The kinocilium is surrounded by actin-based stereocilia.","definition_xrefs":["GOC:dph","PMID:15882574","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"is_a","term_name":"9+2 non-motile cilium","termid":"GO:0097732"},{"relation_name":"part_of","term_name":"stereocilium bundle","termid":"GO:0032421"},{"relation_name":"part_of","term_name":"organelle","termid":"GO:0043226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"kinocilium","secondary_identifiers":["Wikipedia:Kinocilium"],"termid":"GO:0060091"}


id: PBO:0072100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 31","termid":"PBO:0072100"}


id: GO:0015792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arabitol is transported across a lipid bilayer, from one side of a membrane to the other. Arabitol is the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"arabinitol transmembrane transport","synonyms":[{"name":"arabinitol transport","type":"related"},{"name":"arabitol transport","type":"related"}],"termid":"GO:0015792"}


id: PBO:0038852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS19 antisense RNA 1","termid":"PBO:0038852"}


id: GO:0050187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-phosphocreatine + H2O = creatine + phosphate.","definition_xrefs":["EC:3.9.1.1","RHEA:12977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid phosphorus-nitrogen bonds","termid":"GO:0016825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphoamidase activity","secondary_identifiers":["MetaCyc:PHOSPHOAMIDASE-RXN","KEGG_REACTION:R01882"],"synonyms":[{"name":"creatine phosphatase activity","type":"related"},{"name":"phosphamide hydrolase activity","type":"related"}],"termid":"GO:0050187"}


id: GO:0141029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts focal adhesion in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19489119","PMID:24905543","PMID:24573681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host focal adhesion","synonyms":[{"name":"disruption by symbiont of host focal adhesion","type":"exact"}],"termid":"GO:0141029"}


id: PBO:0048791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2 pseudogene 2","termid":"PBO:0048791"}


id: PR:O74470
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C1739.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.08c","synonyms":[{"name":"Spom972h-SPCC1739.08c","type":"exact"}],"termid":"PR:O74470"}


id: GO:0031217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4) linkages in (1->4)-beta-D-glucans, to remove successive glucose units.","definition_xrefs":["GOC:mlg","EC:3.2.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucan 1,4-beta-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.74-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucohydrolase activity","type":"broad"},{"name":"beta-1,4-beta-glucanase activity","type":"broad"},{"name":"beta-1,4-glucanase activity","type":"broad"},{"name":"exo-1,4-beta-D-glucosidase activity","type":"related"},{"name":"exo-1,4-beta-glucanase activity","type":"exact"},{"name":"exo-1,4-beta-glucosidase activity","type":"exact"},{"name":"exo-beta-1,4-glucanase activity","type":"exact"},{"name":"exo-beta-1,4-glucosidase activity","type":"exact"},{"name":"exocellulase activity","type":"exact"}],"termid":"GO:0031217"}


id: PBO:0063046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralemmin 2","termid":"PBO:0063046"}


id: PBO:0063981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 15","termid":"PBO:0063981"}


id: PR:Q92350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcd1 gene.","definition_xrefs":["UniProtKB:Q92350","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase C6G9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.05","synonyms":[{"name":"Spom972h-pcd1","type":"exact"}],"termid":"PR:Q92350"}


id: GO:0035322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal cell from one site to another that will contribute to the formation of a limb bud.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell migration","termid":"GO:0090497"},{"relation_name":"part_of","term_name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell migration involved in limb bud formation","termid":"GO:0035322"}


id: PBO:0005859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Puf family RNA-binding protein Puf6 (predicted)","termid":"PBO:0005859"}


id: GO:0047127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + thiomorpholine-3-carboxylate = NAD(P)H + 3,4-dehydro-1,4-thiomorpholine-3-carboxylate.","definition_xrefs":["MetaCyc:1.5.1.25-RXN","EC:1.5.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thiomorpholine-carboxylate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-5693347"],"synonyms":[{"name":"ketimine reductase activity","type":"related"},{"name":"ketimine-reducing enzyme","type":"related"},{"name":"thiomorpholine-3-carboxylate:NAD(P)+ 5,6-oxidoreductase activity","type":"related"}],"termid":"GO:0047127"}


id: PBO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and Fe(II) dioxygenase domain containing protein 1","termid":"PBO:0004138"}


id: PBO:0084524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs family (Chs5p-Arf1p-binding proteins); members include Bch1p, Bch2p, Bud7p, and Chs6p; ChAPs family proteins form the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; BUD7 has a paralog, BCH1, that arose from the whole genome duplication","termid":"PBO:0084524"}


id: PBO:0079199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 2","termid":"PBO:0079199"}


id: GO:0060884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which cells are removed from the inner loop of a semicircular canal.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"semicircular canal morphogenesis","termid":"GO:0048752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate","termid":"GO:0060884"}


id: GO:0036486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of trunk neural crest cells from the neural tube, travelling ventrally through the anterior half of each sclerotome. Trunk neural crest cells that remain in the sclerotome form the dorsal root ganglia containing the sensory neurons. Trunk neural crest cells that continue more ventrally form the sympathetic ganglia, the adrenal medulla, and the nerve clusters surrounding the aorta.","definition_xrefs":["GOC:PARL","PMID:16319111","PMID:19386662","GOC:bf","GOC:mat"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trunk neural crest cell migration","termid":"GO:0036484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral trunk neural crest cell migration","synonyms":[{"name":"trunk NCC migration through anterior sclerotome","type":"exact"},{"name":"trunk NCC migration within somite","type":"exact"},{"name":"ventral trunk NCC migration","type":"exact"}],"termid":"GO:0036486"}


id: PBO:0083375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF PGD1/YGL025C","termid":"PBO:0083375"}


id: PBO:0091138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, human C6orf136 ortholog","termid":"PBO:0091138"}


id: PBO:0108991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 3","termid":"PBO:0108991"}


id: PBO:0045729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 8","termid":"PBO:0045729"}


id: PBO:0069127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 377, pseudogene","termid":"PBO:0069127"}


id: PBO:0079502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin like 4B","termid":"PBO:0079502"}


id: PBO:0067910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 212","termid":"PBO:0067910"}


id: PBO:0079694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 2","termid":"PBO:0079694"}


id: GO:1901031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to reactive oxygen species","synonyms":[{"name":"regulation of response to AOS","type":"exact"},{"name":"regulation of response to ROI","type":"exact"},{"name":"regulation of response to ROS","type":"exact"},{"name":"regulation of response to active oxygen species","type":"exact"},{"name":"regulation of response to reactive oxidative species","type":"exact"},{"name":"regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901031"}


id: PBO:0004862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13 (predicted)","termid":"PBO:0004862"}


id: PBO:0027660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitochondrion","termid":"PBO:0027660"}


id: PBO:0065504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraspeckle component 1 pseudogene 1","termid":"PBO:0065504"}


id: PR:O60069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swf1 gene.","definition_xrefs":["UniProtKB:O60069","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase swf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.07","synonyms":[{"name":"Spom972h-swf1","type":"exact"}],"termid":"PR:O60069"}


id: GO:1901885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-hydroxybenzoyl-CoA.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA metabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901885"}


id: FYPO:0003892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-prone translesion synthesis is abnormal. Error-prone translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication.","definition_xrefs":["GO:0042276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal error-prone translesion synthesis","synonyms":[{"name":"abnormal error-prone translesion synthesis during mitotic cell cycle","type":"related"},{"name":"abnormal error-prone translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0003892"}


id: PBO:0091499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor Fub1","termid":"PBO:0091499"}


id: PBO:0074901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74","termid":"PBO:0074901"}


id: PBO:0064402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase pseudogene 1","termid":"PBO:0064402"}


id: PR:P36598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi1 gene.","definition_xrefs":["UniProtKB:P36598","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine repressible genes regulatory protein thi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.10","synonyms":[{"name":"Spom972h-thi1","type":"exact"},{"name":"transcription factor ntf1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36598"}


id: PBO:0053888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1168","termid":"PBO:0053888"}


id: PR:Q9C0W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.14c gene.","definition_xrefs":["UniProtKB:Q9C0W5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial membrane protein C800.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.14c","synonyms":[{"name":"Spom972h-SPBC800.14c","type":"exact"}],"termid":"PR:Q9C0W5"}


id: PBO:0088706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S10","termid":"PBO:0088706"}


id: GO:0034618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"arginine binding","synonyms":[{"name":"Arg binding","type":"exact"},{"name":"aminopentanoic acid binding","type":"related"}],"termid":"GO:0034618"}


id: PBO:0047608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four and a half LIM domains 3","termid":"PBO:0047608"}


id: PBO:0083232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; contained completely within TEL07R","termid":"PBO:0083232"}


id: GO:0070679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to inositol 1,4,5 trisphosphate.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"inositol 1,4,5 trisphosphate binding","synonyms":[{"name":"IP3 binding","type":"exact"},{"name":"InsP3 binding","type":"exact"}],"termid":"GO:0070679"}


id: PBO:0089074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase Erg8","termid":"PBO:0089074"}


id: PATO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A porosity quality inhering in a bearer by virtue of the bearer's being capable of admitting the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porosity","termid":"PATO:0000973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porous","termid":"PATO:0000984"}


id: GO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a copper protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with a copper protein as acceptor","secondary_identifiers":["EC:1.20.9.-"],"termid":"GO:0052882"}


id: GO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricoumaroyl spermidine + NADPH + O2 = dicoumaroyl monocaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tricoumaroylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11260"],"synonyms":[{"name":"tricoumaroyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072547"}


id: PBO:0084699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial glutamyl-tRNA synthetase; predicted to be palmitoylated","termid":"PBO:0084699"}


id: PBO:0068991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 235, pseudogene","termid":"PBO:0068991"}


id: SO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a signal recognition particle (SRP) RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"SRP_RNA_encoding","termid":"SO:0000642"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_gene","synonyms":[{"name":"SRP RNA gene","type":"exact"}],"termid":"SO:0001269"}


id: GO:0016593
data:
  {"annotated_genes":["SJAG_01610","SJAG_01218","SJAG_00139","SJAG_04933","SJAG_01151","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90879,94892,98862,101213,104745,107442],"is_not":false,"summary":null,"term":"GO:0016593"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p.","definition_xrefs":["PMID:11884586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_01151":null,"SJAG_01218":null,"SJAG_01610":null,"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"Cdc73/Paf1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Paf1 complex","type":"exact"},{"name":"Paf1p complex","type":"exact"}],"termid":"GO:0016593","terms_by_termid":{"GO:0016593":null}}


id: PBO:0084219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase); dimeric enzyme that catalyzes the third step in the common pathway for methionine and threonine biosynthesis; enzyme has nucleotide-binding, dimerization and catalytic regions","termid":"PBO:0084219"}


id: GO:1904448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GO_REF:0000058","PMID:2342602","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of aspartate secretion","termid":"GO:1904448"}


id: GO:1900637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asperfuranone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"asperfuranone biosynthetic process","termid":"GO:1900554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of asperfuranone biosynthetic process","synonyms":[{"name":"regulation of asperfuranone anabolism","type":"exact"},{"name":"regulation of asperfuranone biosynthesis","type":"exact"},{"name":"regulation of asperfuranone formation","type":"exact"},{"name":"regulation of asperfuranone synthesis","type":"exact"}],"termid":"GO:1900637"}


id: PBO:0034639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_telomere","termid":"PBO:0034639"}


id: PBO:0083728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane; involved in elongation of very long-chain fatty acids; evolutionarily conserved, similar to mammalian PTPLA and PTPLB; involved in sphingolipid biosynthesis and protein trafficking","termid":"PBO:0083728"}


id: PBO:0076432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 8","termid":"PBO:0076432"}


id: GO:0021717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the inferior olivary nucleus to attain its fully functional state. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"medulla oblongata maturation","termid":"GO:0021582"},{"relation_name":"part_of","term_name":"inferior olivary nucleus development","termid":"GO:0021713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus maturation","synonyms":[{"name":"inferior olive maturation","type":"related"}],"termid":"GO:0021717"}


id: GO:0048673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the axons of intact undamaged neurons as a result of injury to an axon. The collateral sprouts typically appear from undamaged axons in a tissue which has had part of its nerve supply removed, and they can often innervate successfully any cells that have lost some or all of their original synaptic input.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"},{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}


id: MOD:00862
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-alanine.","definition_xrefs":["RESID:AA0191","ChEBI:29949","PubMed:7961627","PubMed:7287302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ala)","type":"exact"},{"name":"MOD_RES D-alanine (Ser)","type":"exact"}],"termid":"MOD:00862"}


id: PBO:0076186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 1","termid":"PBO:0076186"}


id: PBO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030338"}


id: GO:0051549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte migration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell migration","termid":"GO:0010634"},{"relation_name":"is_a","term_name":"regulation of keratinocyte migration","termid":"GO:0051547"},{"relation_name":"positively_regulates","term_name":"keratinocyte migration","termid":"GO:0051546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte migration","synonyms":[{"name":"activation of keratinocyte migration","type":"narrow"},{"name":"stimulation of keratinocyte migration","type":"narrow"},{"name":"up regulation of keratinocyte migration","type":"exact"},{"name":"up-regulation of keratinocyte migration","type":"exact"},{"name":"upregulation of keratinocyte migration","type":"exact"}],"termid":"GO:0051549"}


id: PBO:0042507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 1","termid":"PBO:0042507"}


id: PBO:0056300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 gamma","termid":"PBO:0056300"}


id: PBO:0063701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGLS divergent transcript","termid":"PBO:0063701"}


id: GO:0021804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the loss of attachments of a cell in the ventricular zone.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","PMID:12626695","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"part_of","term_name":"somal translocation","termid":"GO:0021802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion in ventricular zone","synonyms":[{"name":"down regulation of cell adhesion in ventricular zone","type":"exact"},{"name":"down-regulation of cell adhesion in ventricular zone","type":"exact"},{"name":"downregulation of cell adhesion in ventricular zone","type":"exact"},{"name":"inhibition of cell adhesion in ventricular zone","type":"narrow"}],"termid":"GO:0021804"}


id: GO:1902108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mitochondrial membrane permeability that is involved in apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","GOC:pm","PMID:19168129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic mitochondrial changes","termid":"GO:0008637"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability involved in apoptotic process","synonyms":[{"name":"regulation of mitochondrial membrane permeability involved in apoptosis","type":"narrow"},{"name":"regulation of mitochondrial membrane permeability involved in apoptotic cell death","type":"exact"},{"name":"regulation of mitochondrial membrane permeability involved in apoptotic program","type":"narrow"},{"name":"regulation of mitochondrial membrane permeability involved in apoptotic programmed cell death","type":"exact"},{"name":"regulation of mitochondrial membrane permeability involved in programmed cell death by apoptosis","type":"exact"},{"name":"regulation of mitochondrial membrane permeability involved in signaling (initiator) caspase activity","type":"related"},{"name":"regulation of mitochondrial membrane permeability involved in type I programmed cell death","type":"narrow"},{"name":"regulation of transport across mitochondrial membrane involved in apoptosis","type":"narrow"},{"name":"regulation of transport across mitochondrial membrane involved in apoptotic cell death","type":"exact"},{"name":"regulation of transport across mitochondrial membrane involved in apoptotic process","type":"exact"},{"name":"regulation of transport across mitochondrial membrane involved in apoptotic program","type":"narrow"},{"name":"regulation of transport across mitochondrial membrane involved in apoptotic programmed cell death","type":"exact"},{"name":"regulation of transport across mitochondrial membrane involved in programmed cell death by apoptosis","type":"exact"},{"name":"regulation of transport across mitochondrial membrane involved in signaling (initiator) caspase activity","type":"related"},{"name":"regulation of transport across mitochondrial membrane involved in type I programmed cell death","type":"narrow"}],"termid":"GO:1902108"}


id: PR:Q1MTN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf1 gene.","definition_xrefs":["UniProtKB:Q1MTN9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly factor 1 subunit rlf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.03c","synonyms":[{"name":"Spom972h-pcf1","type":"exact"}],"termid":"PR:Q1MTN9"}


id: GO:0102416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-3-gentiotrioside + UDP-alpha-D-glucose = quercetin-3-gentiotetraside + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"quercetin gentiotrioside 1,6-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13799"],"termid":"GO:0102416"}


id: PBO:0028572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_without_septation","termid":"PBO:0028572"}


id: PBO:0061446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 3 group C member 1","termid":"PBO:0061446"}


id: GO:0032655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-12 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-12 production","termid":"GO:0032615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-12 production","secondary_identifiers":["GO:2001182","GO:0045075"],"synonyms":[{"name":"regulation of CLMF production","type":"related"},{"name":"regulation of IL-12 production","type":"exact"},{"name":"regulation of NKSF production","type":"related"},{"name":"regulation of interleukin-12 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-12 secretion","type":"narrow"}],"termid":"GO:0032655"}


id: GO:0015247
data:
  {"annotated_genes":["SJAG_05209","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95218,108494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Enables the transfer of aminophospholipids from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"aminophospholipid flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminophospholipid transmembrane transporter activity","type":"related"},{"name":"aminophospholipid transporter activity","type":"related"}],"termid":"GO:0015247","terms_by_termid":{"GO:0140346":null}}


id: PATO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along transverse axis.","definition_xrefs":["PATOC:msp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally compressed","synonyms":[{"name":"laterally flattened","type":"exact"},{"name":"transversely flattened","type":"related"}],"termid":"PATO:0002054"}


id: PBO:0080644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 91","termid":"PBO:0080644"}


id: PBO:0036528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator Bye1 (predicted)","termid":"PBO:0036528"}


id: GO:0099060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane (obsolete GO:0099060)","termid":"GO:0099060"}


id: GO:0015481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of maltose from one side of a membrane to the other. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the enzymatic breakdown of glycogen and starch. This transporter is a porin so enables the energy independent passage of substances, sized less than 1000 Da, across a membrane. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"maltose transporting porin activity","secondary_identifiers":["Wikipedia:Maltoporin"],"synonyms":[{"name":"maltoporin","type":"exact"}],"termid":"GO:0015481"}


id: PBO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 8, envelope","termid":"PBO:0046554"}


id: GO:0098926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"postsynaptic signal transduction","synonyms":[{"name":"postsynaptic signaling pathway","type":"exact"}],"termid":"GO:0098926"}


id: GO:0010888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"is_a","term_name":"negative regulation of lipid localization","termid":"GO:1905953"},{"relation_name":"negatively_regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid storage","termid":"GO:0010888"}


id: GO:0036445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a neuronal stem cell.","definition_xrefs":["CL:0000047","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal stem cell division","synonyms":[{"name":"NSC division","type":"exact"}],"termid":"GO:0036445"}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["PMID:23150719","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: PBO:0085644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in maintaining mitochondrial integrity and glutathione homeostasis; localized to the cytoplasm; in W303 strain IMI1 is encoded by one continuous open reading frame comprising of YDL037C, the intergenic region and YDL039C, while in the reference sequence of S288C, YDL037C encodes Bsc1p and YDL039C encodes Prm7p.","termid":"PBO:0085644"}


id: PR:Q96WV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdk9 gene.","definition_xrefs":["UniProtKB:Q96WV9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.10","synonyms":[{"name":"Spom972h-cdk9","type":"exact"},{"name":"cell division protein kinase 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV9"}


id: PBO:0086261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates phospholipid asymmetry at plasma membrane; may act to generate normal levels of PI4P; may act together with or upstream of Stt4p; at least partially mediates proper localization of Stt4p to the plasma membrane","termid":"PBO:0086261"}


id: PBO:0084537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p14.5 protein family; functionally complements Mmf1p function when targeted to mitochondria; heat shock inducible; high-dosage growth inhibitor; forms a homotrimer in vitro; HMF1 has a paralog, MMF1, that arose from the whole genome duplication","termid":"PBO:0084537"}


id: GO:0052352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the formation of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis by host of substance in symbiont (obsolete GO:0052352)","termid":"GO:0052352"}


id: GO:0016656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + 2 monodehydroascorbate = NAD+ + 2 ascorbate.","definition_xrefs":["EC:1.6.5.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"monodehydroascorbate reductase (NADH) activity","secondary_identifiers":["RHEA:14581","MetaCyc:1.6.5.4-RXN"],"synonyms":[{"name":"AFR","type":"related"},{"name":"AFR-reductase activity","type":"related"},{"name":"MDAsA reductase (NADPH)","type":"related"},{"name":"MDHA","type":"related"},{"name":"NADH-semidehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:AFR oxidoreductase activity","type":"related"},{"name":"NADH:ascorbate radical oxidoreductase activity","type":"related"},{"name":"NADH:monodehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:semidehydroascorbic acid oxidoreductase activity","type":"related"},{"name":"SDA reductase activity","type":"related"},{"name":"ascorbate free radical reductase activity","type":"related"},{"name":"ascorbate free-radical reductase activity","type":"related"},{"name":"ascorbic free radical reductase activity","type":"related"},{"name":"monodehydroascorbate reductase activity","type":"exact"},{"name":"semidehydroascorbate reductase activity","type":"related"}],"termid":"GO:0016656"}


id: PBO:0005197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21 (predicted)","termid":"PBO:0005197"}


id: PBO:0082230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha catalytic subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082230"}


id: GO:0070279
data:
  {"annotated_genes":["SJAG_03914","SJAG_03055","SJAG_04145","SJAG_03434","SJAG_03312","SJAG_00495","SJAG_02305","SJAG_04149","SJAG_04178","SJAG_03861","SJAG_05230","SJAG_04988","SJAG_04678","SJAG_00097","SJAG_03961","SJAG_00186","SJAG_00432","SJAG_01766","SJAG_00714","SJAG_00673","SJAG_02972","SJAG_03306","SJAG_00582","SJAG_02791","SJAG_03102","SJAG_00830","SJAG_02205","SJAG_00937","SJAG_03671","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84165,86834,89267,91458,106384,87241,83313,109999,90133,106455,95135,107794,99434,94077,59979,88397,94769,102773,114482,68579,96614,66255,67315,87766,101393,98102,102663,64458,99617,107193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin B6 compound: pyridoxal, pyridoxamine, pyridoxine, or the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"vitamin B6 binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0070279","terms_by_termid":{"GO:0030170":null}}


id: PBO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 5' to 3' DNA/RNA helicase Sen1","termid":"PBO:0001974"}


id: PBO:0086727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YNL034W has a paralog, YNL018C, that arose from a segmental duplication","termid":"PBO:0086727"}


id: PBO:0079271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC39C antisense RNA 1","termid":"PBO:0079271"}


id: GO:0070341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fat cells by cell division, resulting in the expansion of their population. A fat cell is an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell proliferation","synonyms":[{"name":"adipocyte proliferation","type":"exact"},{"name":"adipose cell proliferation","type":"exact"}],"termid":"GO:0070341"}


id: FYPO:0001128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is lower than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased septation index","synonyms":[{"name":"decreased septation","type":"related"},{"name":"reduced septation index","type":"exact"}],"termid":"FYPO:0001128"}


id: PBO:0045953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like, fibronectin type III and laminin G domains","termid":"PBO:0045953"}


id: PBO:0082372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication","termid":"PBO:0082372"}


id: PBO:0013477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase Atd3 (predicted)","termid":"PBO:0013477"}


id: GO:0102991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: myristoyl-CoA + H2O = H+ + tetradecanoate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete myristoyl-CoA hydrolase activity (obsolete GO:0102991)","termid":"GO:0102991"}


id: GO:0021759
data:
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id: GO:0050999
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id: SO:0000055
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id: PBO:0074552
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id: GO:0010232
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id: PBO:0090168
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id: PBO:0072308
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id: GO:0031323
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id: GO:0034032
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  {"annotated_genes":["SJAG_05277","SJAG_04499","SJAG_03731","SJAG_01187","SJAG_02769","SJAG_00866","SJAG_02741","SJAG_04627","SJAG_03715","SJAG_03163","SJAG_03064","SJAG_00084","SJAG_01139","SJAG_02158","SJAG_00427","SJAG_02247","SJAG_01524","SJAG_03313","SJAG_04288","SJAG_00982","SJAG_01989","SJAG_04007","SJAG_03471","SJAG_03290","SJAG_00902","SJAG_01402","SJAG_02380","SJAG_02006","SJAG_04895","SJAG_03349","SJAG_04865","SJAG_00947","SJAG_01474","SJAG_03909","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050428"},{"annotations":[94106,88871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[114546,104513,94776,90665,82881,110290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[93759,86973,110397,111833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[92516,104634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006637"},{"annotations":[84882,110899,87769,106549,113147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[95591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[92287,84190,90082,110965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[108050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[103368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[109452,101454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[94083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[107336,111540],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[111034,85427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a purine nucleoside bisphosphate, a compound consisting of a purine base linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_00427":null,"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02247":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04288":null,"SJAG_04499":null,"SJAG_04627":null,"SJAG_04865":null,"SJAG_04895":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0034032","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0015937":null,"GO:0015938":null,"GO:0019287":null,"GO:0019427":null,"GO:0033512":null,"GO:0035336":null,"GO:0035338":null,"GO:0050428":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: PBO:0059569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1M","termid":"PBO:0059569"}


id: GO:0051032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nucleic acids from one side of a membrane to the other. Nucleic acids are single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}


id: PBO:0003301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose-glycoprotein glucosyltransferase Gpt1","termid":"PBO:0003301"}


id: PBO:0058728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6856","termid":"PBO:0058728"}


id: FYPO:0007465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to chromatin over a different spatial extent than normal. The protein may localize to a larger or smaller region than normal, or its localization may be shifted along the length of the chromosome.","definition_xrefs":["PomBase:mah","PMID:31615333","PMID:18957202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered spatial extent of protein localization to chromatin","synonyms":[{"name":"abnormal spatial extent of protein localization to chromatin","type":"exact"},{"name":"altered spatial extent of protein localisation to chromatin","type":"exact"},{"name":"altered spatial extent of protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"altered spatial extent of protein localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007465"}


id: PATO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A trisomy quality inhering in a bearer by virtue of the bearer's having extra chromosomal material in only some of it's cells.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy","termid":"PATO:0001389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy","termid":"PATO:0001391"}


id: PBO:0085536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6B has a paralog, RPS6A, that arose from the whole genome duplication","termid":"PBO:0085536"}


id: PBO:0040160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit family member 5","termid":"PBO:0040160"}


id: PBO:0049304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 5","termid":"PBO:0049304"}


id: PBO:0052481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHDC7B divergent transcript","termid":"PBO:0052481"}


id: PBO:0082309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic-type endopeptidase; involved in the cleavage of long-chain polyubiquitinated substrates; role in proteasome-independent, ubiquitin (Ub)-dependent proteolysis and DNA-protein crosslink repair; Ub-shuttle receptor for HO and Ufo1p; DNA damage-inducible v-SNARE binding protein and negative regulator of constitutive exocytosis; possible role in the S-phase checkpoint; UBL-UBA family member containing Ub-like (UBL), helical, Ub-associated (UBA) and retroviral-like proteinase (RVP) domains","termid":"PBO:0082309"}


id: GO:0046507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + UDP-D-glucose = H2O + UDP-6-sulfoquinovose.","definition_xrefs":["EC:3.13.1.1","RHEA:13197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-sulfur bonds","termid":"GO:0046508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"UDPsulfoquinovose synthase activity","secondary_identifiers":["KEGG_REACTION:R05775","MetaCyc:RXN-1223"],"synonyms":[{"name":"UDP-6-sulfo-6-deoxyglucose sulfohydrolase activity","type":"related"},{"name":"UDP-sulfoquinovose synthase activity","type":"related"},{"name":"UDPsulphoquinovose synthase activity","type":"exact"},{"name":"sulfite:UDP-glucose sulfotransferase activity","type":"exact"}],"termid":"GO:0046507"}


id: GO:0098832
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A recycling endosome that is organized around the microtubule organizing center, close to the nucleus. This is the main recycling endosome of most cells. It receives input from the Golgi as well as recycled molecules from early endosomes.","definition_xrefs":["PMID:19696797","PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"peri-centrosomal recycling endosome","termid":"GO:0098832"}


id: SO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding regions of DNA sequence that separate genes coding for the 28S, 5.8S, and 18S ribosomal RNAs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_spacer_region","termid":"SO:0000638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_transcribed_spacer_region","synonyms":[{"name":"internal transcribed spacer region","type":"exact"}],"termid":"SO:0000639"}


id: PBO:0056210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B5","termid":"PBO:0056210"}


id: PBO:0069761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1044, pseudogene","termid":"PBO:0069761"}


id: PBO:0082713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mitotic exit network; associates with and is required for the activation and Cdc15p-dependent phosphorylation of the Dbf2p kinase; required for cytokinesis and cell separation; component of the CCR4 transcriptional complex; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress","termid":"PBO:0082713"}


id: GO:0140408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA alternative polyadenylation.","definition_xrefs":["PMID:29507755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"},{"relation_name":"regulates","term_name":"mRNA alternative polyadenylation","termid":"GO:0110104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA alternative polyadenylation","termid":"GO:0140408"}


id: GO:0036197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zymosterol, (5alpha-cholesta-8,24-dien-3beta-ol).","definition_xrefs":["GOC:yaf","MetaCyc:PWY-6074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"zymosterol metabolic process","termid":"GO:0036196"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"zymosterol biosynthetic process","synonyms":[{"name":"zymosterol anabolism","type":"exact"},{"name":"zymosterol biosynthesis","type":"exact"},{"name":"zymosterol formation","type":"exact"},{"name":"zymosterol synthesis","type":"exact"}],"termid":"GO:0036197"}


id: GO:1904491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary transition zone.","definition_xrefs":["GO_REF:0000087","GOC:kmv","GOC:TermGenie","PMID:21422230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to ciliary transition zone","synonyms":[{"name":"protein localisation in ciliary transition zone","type":"exact"},{"name":"protein localisation to ciliary transition zone","type":"exact"},{"name":"protein localization in ciliary transition zone","type":"exact"}],"termid":"GO:1904491"}


id: GO:0035627
data:
  {"annotated_genes":["SJAG_03690","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89876,113603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"}]},"cv_name":"biological_process","definition":"The directed movement of ceramides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ceramides are a class of lipid composed of sphingosine linked to a fatty acid.","definition_xrefs":["GOC:sart","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ceramide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035627","terms_by_termid":{"GO:0035621":null}}


id: GO:0043675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The third layer of the sexine.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sexine","termid":"GO:0043673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sculpture element","termid":"GO:0043675"}


id: GO:0051664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which nuclear pores are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear pore localization","secondary_identifiers":["GO:0031081"],"synonyms":[{"name":"establishment and maintenance of nuclear pore localization","type":"exact"},{"name":"nuclear pore distribution","type":"related"},{"name":"nuclear pore localisation","type":"exact"},{"name":"positioning of nuclear pores","type":"related"}],"termid":"GO:0051664"}


id: GO:0097580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining copper ions in an intracellular area such that they are separated from other components of a biological system.","definition_xrefs":["PMID:3099306","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of copper ion","termid":"GO:0097578"},{"relation_name":"part_of","term_name":"intracellular copper ion homeostasis","termid":"GO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0098771","GO:0051179"],"is_obsolete":false,"name":"intracellular sequestering of copper ion","synonyms":[{"name":"intracellular copper ion retention","type":"exact"},{"name":"intracellular copper ion sequestering","type":"exact"},{"name":"intracellular copper ion sequestration","type":"exact"},{"name":"intracellular copper ion storage","type":"exact"},{"name":"intracellular retention of copper ion","type":"exact"},{"name":"intracellular sequestration of copper ion","type":"exact"},{"name":"intracellular storage of copper ion","type":"exact"}],"termid":"GO:0097580"}


id: PR:Q9Y7Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.03","synonyms":[{"name":"Spom972h-gas4","type":"exact"}],"termid":"PR:Q9Y7Y7"}


id: GO:1990424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein arginine = ADP + protein arginine phosphate.","definition_xrefs":["GOC:imk","PMID:22517742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0004672","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein arginine kinase activity","synonyms":[{"name":"protein-arginine kinase activity","type":"exact"}],"termid":"GO:1990424"}


id: FYPO:0005299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0002102"},{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint","termid":"FYPO:0006578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005299"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: PBO:0002844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Snf21","termid":"PBO:0002844"}


id: PBO:0028046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_detached_from_cytoplasmic_microtubules","termid":"PBO:0028046"}


id: GO:1903268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GOC:bhm","PMID:12679340","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"positively_regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ornithine catabolic process","synonyms":[{"name":"activation of ornithine breakdown","type":"narrow"},{"name":"activation of ornithine catabolic process","type":"narrow"},{"name":"activation of ornithine catabolism","type":"narrow"},{"name":"activation of ornithine degradation","type":"narrow"},{"name":"positive regulation of ornithine breakdown","type":"exact"},{"name":"positive regulation of ornithine catabolism","type":"exact"},{"name":"positive regulation of ornithine degradation","type":"exact"},{"name":"up regulation of ornithine breakdown","type":"exact"},{"name":"up regulation of ornithine catabolic process","type":"exact"},{"name":"up regulation of ornithine catabolism","type":"exact"},{"name":"up regulation of ornithine degradation","type":"exact"},{"name":"up-regulation of ornithine breakdown","type":"exact"},{"name":"up-regulation of ornithine catabolic process","type":"exact"},{"name":"up-regulation of ornithine catabolism","type":"exact"},{"name":"up-regulation of ornithine degradation","type":"exact"},{"name":"upregulation of ornithine breakdown","type":"exact"},{"name":"upregulation of ornithine catabolic process","type":"exact"},{"name":"upregulation of ornithine catabolism","type":"exact"},{"name":"upregulation of ornithine degradation","type":"exact"}],"termid":"GO:1903268"}


id: PBO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 5","termid":"PBO:0062186"}


id: PBO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 31","termid":"PBO:0060011"}


id: GO:1990113
data:
  {"annotated_genes":["SJAG_04093","SJAG_04012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102363,114147],"is_not":false,"summary":null,"term":"GO:1990113"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase I complex.","definition_xrefs":["GOC:rb","PMID:23459708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase I assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase I complex assembly","type":"exact"},{"name":"RNA Polymerase I complex assembly","type":"exact"}],"termid":"GO:1990113","terms_by_termid":{"GO:1990113":null}}


id: PBO:0046313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoglin","termid":"PBO:0046313"}


id: PBO:0049060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 68","termid":"PBO:0049060"}


id: MOD:01791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal phosphohistidine residue to phosphohistidine immonium ion.","definition_xrefs":["PubMed:18688235","PubMed:20847263","PubMed:17690871"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"phosphorylated L-histidine","termid":"MOD:00890"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine immonium ion","synonyms":[{"name":"2-(1H-imidazolyl)ethaniminium","type":"exact"}],"termid":"MOD:01791"}


id: GO:0016962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor-associated protein activity (obsolete GO:0016962)","synonyms":[{"name":"receptor-associated protein activity","type":"exact"}],"termid":"GO:0016962"}


id: GO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIF complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["PMID:16858867","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"TFIIF-class transcription factor complex binding","synonyms":[{"name":"TFIIF-class transcription factor binding","type":"exact"}],"termid":"GO:0001096"}


id: PBO:0051498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 22","termid":"PBO:0051498"}


id: PBO:0045995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2B","termid":"PBO:0045995"}


id: SO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by pyrosequencing technology.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrosequenced_read","synonyms":[{"name":"pyorsequenced read","type":"related"}],"termid":"SO:0001424"}


id: PBO:0065219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase associated protein 2","termid":"PBO:0065219"}


id: PBO:0055774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 2","termid":"PBO:0055774"}


id: PBO:0028481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activation_of_monopolar_cell_growth_at_new_end","termid":"PBO:0028481"}


id: PBO:0072307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 4","termid":"PBO:0072307"}


id: CHEBI:16467
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An L-alpha-amino acid that is the L-isomer of arginine.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine","termid":"CHEBI:16467"}


id: GO:1990075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane region adjacent to the base of eukaryotic cilia and flagella that is enriched in endocytosis-associated proteins and vesicles and that appears to regulate ciliary membrane homeostasis.","definition_xrefs":["GOC:dr","PMID:22342749","GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"periciliary membrane compartment","synonyms":[{"name":"PCMC","type":"exact"}],"termid":"GO:1990075"}


id: PBO:0028684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope","termid":"PBO:0028684"}


id: GO:0061526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acetylcholine secretion","termid":"GO:0061526"}


id: PBO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A beta","termid":"PBO:0002337"}


id: GO:0051020
data:
  {"annotated_genes":["SJAG_02012","SJAG_03229","SJAG_03002","SJAG_02661","SJAG_04703","SJAG_03662","SJAG_04733","SJAG_00279","SJAG_00968","SJAG_01909","SJAG_03959","SJAG_03470","SJAG_02974","SJAG_01789","SJAG_01358","SJAG_00525","SJAG_04366","SJAG_04400","SJAG_00864","SJAG_03693","SJAG_01943","SJAG_02998","SJAG_02833","SJAG_03085"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73288],"is_not":false,"summary":null,"term":"GO:0051020"},{"annotations":[73149,61082,57240,64446,62775,58891,66358,61444,60163,67340,60830,64327,74013,71576,76709,68729,72758,76259,63595,68665,64648,58588,70919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031267"}]},"cv_name":"molecular_function","definition":"Binding to a GTPase, any enzyme that catalyzes the hydrolysis of GTP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00525":null,"SJAG_00864":null,"SJAG_00968":null,"SJAG_01358":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01943":null,"SJAG_02012":null,"SJAG_02661":null,"SJAG_02833":null,"SJAG_02974":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03085":null,"SJAG_03229":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04703":null,"SJAG_04733":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"GTPase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0051020","terms_by_termid":{"GO:0031267":null,"GO:0051020":null}}


id: PBO:0053208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 7B","termid":"PBO:0053208"}


id: PBO:0089038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1","termid":"PBO:0089038"}


id: GO:0007424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:8625828","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"open tracheal system development","termid":"GO:0007424"}


id: GO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + Na+(out) = glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glucose:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-5658163","Reactome:R-HSA-5656356","Reactome:R-HSA-8932955","Reactome:R-HSA-189208","Reactome:R-HSA-429613"],"synonyms":[{"name":"sodium/glucose symporter activity","type":"exact"}],"termid":"GO:0005412"}


id: PBO:0081668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 589","termid":"PBO:0081668"}


id: PBO:0003436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk27 (predicted)","termid":"PBO:0003436"}


id: PBO:0058129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4431","termid":"PBO:0058129"}


id: PBO:0071917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 2","termid":"PBO:0071917"}


id: FYPO:0005678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured in a cell is too low to detect. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"ubiquitinated protein absent from cell during vegetative growth","synonyms":[{"name":"ubiquitinated protein absent from cell during mitotic cell cycle","type":"related"},{"name":"ubiquitylated protein absent from cell during vegetative growth","type":"exact"},{"name":"undetectable cellular ubiquitinated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0005678"}


id: FYECO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vanoxerine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vanoxerine","termid":"FYECO:0000347"}


id: GO:0033497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sinapate, (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"sinapate metabolic process","termid":"GO:0033496"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sinapate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5168"],"synonyms":[{"name":"sinapate anabolism","type":"exact"},{"name":"sinapate biosynthesis","type":"exact"},{"name":"sinapate formation","type":"exact"},{"name":"sinapate synthesis","type":"exact"}],"termid":"GO:0033497"}


id: GO:0031788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a motilin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"motilin receptor binding","synonyms":[{"name":"motilin receptor ligand","type":"narrow"}],"termid":"GO:0031788"}


id: SO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcriptional_cis_regulatory_region that restricts the activity of a CRM to a single promoter and which functions only when both itself and an insulator are located between the CRM and the promoter.","definition_xrefs":["SO:regcreative"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001058 promoter_targeting_sequence (obsolete SO:0001058)","synonyms":[{"name":"promoter targeting sequence","type":"exact"}],"termid":"SO:0001058"}


id: FYPO:0002564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature transfer RNA (tRNA) measured in a cell is higher than normal. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature tRNA level during vegetative growth","termid":"FYPO:0002579"},{"relation_name":"is_a","term_name":"altered tRNA level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased mature tRNA level during vegetative growth","synonyms":[{"name":"increased mature tRNA accumulation during vegetative growth","type":"related"},{"name":"increased mature tRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature tRNA transcript level during vegetative growth","type":"exact"},{"name":"increased mature transfer RNA level during vegetative growth","type":"exact"},{"name":"increased tRNA level during vegetative growth","type":"broad"}],"termid":"FYPO:0002564"}


id: PBO:0077140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1","termid":"PBO:0077140"}


id: FYPO:0004810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased, and the protein is instead visible in one or a few foci or dots in the cytoplasm.","definition_xrefs":["PMID:25543137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm","termid":"FYPO:0004056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"decreased protein localisation to nucleus, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci, during mitotic interphase","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"}],"termid":"FYPO:0004810"}


id: PBO:0060897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEURL1 antisense RNA 1","termid":"PBO:0060897"}


id: GO:0034046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of guanine residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-purine tract binding","termid":"GO:0070717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"poly(G) binding","synonyms":[{"name":"poly(G) binding, within an RNA molecule","type":"exact"},{"name":"poly(rG) binding","type":"exact"}],"termid":"GO:0034046"}


id: GO:0061570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into dCDP to produce a dCTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete dCDP phosphorylation (obsolete GO:0061570)","termid":"GO:0061570"}


id: PBO:0090936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase Ptp4/Dgk1","termid":"PBO:0090936"}


id: GO:1904637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ionomycin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:17516843","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to ionomycin","termid":"GO:1904636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ionomycin","termid":"GO:1904637"}


id: GO:0150077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuroinflammatory response.","definition_xrefs":["GOC:bc","PMID:18164423","GOC:aruk","PMID:10981966","PMID:11099416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuroinflammatory response","termid":"GO:0150077"}


id: GO:0099569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the cytoskeleton contained within the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic cytoskeleton","termid":"GO:0099569"}


id: GO:0140547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition of seed longevity is the ordered series of events during seed development, that prevent embryo deterioration and ROS damage and thus contribute to seed viability over time or in response to adverse environmental conditions. These events include protective (e.g. production of glassy cytoplasm ) and repair (e.g. oxidative stress responses) processes.","definition_xrefs":["PMID:26637538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of seed longevity","termid":"GO:0140547"}


id: FYPO:0002405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and is curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable stubby vegetative cell","termid":"FYPO:0002106"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable curved stubby vegetative cell","synonyms":[{"name":"curved stubby viable cell","type":"exact"},{"name":"viable curved stubby cell during vegetative growth","type":"exact"},{"name":"viable curved stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable curved watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0002405"}


id: PBO:0048389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase","termid":"PBO:0048389"}


id: PBO:0091999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1 Rpp103","termid":"PBO:0091999"}


id: GO:1904244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["GO_REF:0000058","PMID:12771515","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of pancreatic trypsinogen secretion","termid":"GO:1904242"},{"relation_name":"positively_regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"activation of pancreatic trypsinogen release","type":"narrow"},{"name":"activation of pancreatic trypsinogen secretion","type":"narrow"},{"name":"positive regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"upregulation of pancreatic trypsinogen release","type":"exact"},{"name":"upregulation of pancreatic trypsinogen secretion","type":"exact"}],"termid":"GO:1904244"}


id: PBO:0071167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 6","termid":"PBO:0071167"}


id: GO:0018671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NAD(P)H + H+ + O2 = 3,4-dihydroxybenzoate + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.14.13.33-RXN"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate 3-monooxygenase (reduced nicotinamide adenine dinucleotide (phosphate))","type":"exact"},{"name":"4-hydroxybenzoate,NAD(P)H:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"4-hydroxybenzoate-3-hydroxylase activity","type":"related"}],"termid":"GO:0018671"}


id: PBO:0048216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho3","termid":"PBO:0048216"}


id: PBO:0062072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 3 pseudogene","termid":"PBO:0062072"}


id: GO:0032718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-9 production","termid":"GO:0032678"},{"relation_name":"negatively_regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-9 production","secondary_identifiers":["GO:0045418"],"synonyms":[{"name":"negative regulation of interleukin-9 biosynthetic process","type":"narrow"},{"name":"down regulation of interleukin-9 production","type":"exact"},{"name":"down-regulation of interleukin-9 production","type":"exact"},{"name":"downregulation of interleukin-9 production","type":"exact"},{"name":"inhibition of interleukin-9 production","type":"narrow"},{"name":"negative regulation of IL-9 production","type":"exact"}],"termid":"GO:0032718"}


id: GO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"molybdopterin cofactor binding","synonyms":[{"name":"Moco binding","type":"exact"}],"termid":"GO:0043546"}


id: GO:2001169
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ATP biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"regulation of ATP metabolic process","termid":"GO:1903578"},{"relation_name":"regulates","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of ATP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ATP anabolism","type":"exact"},{"name":"regulation of ATP biosynthesis","type":"exact"},{"name":"regulation of ATP formation","type":"exact"},{"name":"regulation of ATP regeneration","type":"related"},{"name":"regulation of ATP synthesis","type":"exact"}],"termid":"GO:2001169","terms_by_termid":{"GO:1905706":null}}


id: GO:0008070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by cells of the germ line.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral axis specification, ovarian follicular epithelium","termid":"GO:0008069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maternal determination of dorsal/ventral axis, ovarian follicular epithelium, germ-line encoded","synonyms":[{"name":"maternal determination of dorsal-ventral axis, ovarian follicular epithelium, germ-line encoded","type":"exact"},{"name":"maternal determination of dorsoventral axis, ovarian follicular epithelium, germ-line encoded","type":"exact"}],"termid":"GO:0008070"}


id: PR:P41005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mes1 gene.","definition_xrefs":["UniProtKB:P41005","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mes1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.08c","synonyms":[{"name":"Spom972h-mes1","type":"exact"}],"termid":"PR:P41005"}


id: GO:0047917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-glucose + H2O = D-glucose + GDP + H+.","definition_xrefs":["RHEA:15049","EC:3.2.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GDP-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R00337","MetaCyc:GDP-GLUCOSIDASE-RXN"],"synonyms":[{"name":"GDP-glucose glucohydrolase activity","type":"related"},{"name":"GDPglucose glucohydrolase activity","type":"related"},{"name":"GDPglucosidase activity","type":"related"},{"name":"guanosine diphosphate D-glucose glucohydrolase activity","type":"related"},{"name":"guanosine diphosphoglucosidase activity","type":"related"}],"termid":"GO:0047917"}


id: PBO:0047289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast activation protein alpha","termid":"PBO:0047289"}


id: GO:0034745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), the small GTPase Rac1, and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-IQGAP1-Rac1 complex","termid":"GO:0034745"}


id: GO:1904907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:26373281","GOC:BHF_telomere","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904907"}


id: PBO:0028345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028345"}


id: PBO:0069875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1162, pseudogene","termid":"PBO:0069875"}


id: PBO:0030449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphatase_activity","termid":"PBO:0030449"}


id: PBO:0058489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5683","termid":"PBO:0058489"}


id: PBO:0061650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 21 pseudogene 1","termid":"PBO:0061650"}


id: GO:1903815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["PMID:23897233","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of collecting lymphatic vessel constriction","termid":"GO:1903814"},{"relation_name":"negatively_regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"down regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"down regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"down-regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"down-regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"downregulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"downregulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"inhibition of collecting lymphatic vessel constriction","type":"narrow"},{"name":"inhibition of lymphatic vessel myogenic constriction","type":"narrow"},{"name":"negative regulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903815"}


id: PBO:0081979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZSCAN5A antisense RNA 1","termid":"PBO:0081979"}


id: GO:0097235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:1899286","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097235)","termid":"GO:0097235"}


id: MOD:01551
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01551"}


id: PBO:0015691
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homologue of Parp Zinc finger","termid":"PBO:0015691"}


id: PBO:0000943
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mitochondrial signal sequence","termid":"PBO:0000943"}


id: PBO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small endoribonuclease with 2 transmembrane domains","termid":"PBO:0090444"}


id: GO:0070540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to stearic acid, the 18-carbon saturated fatty acid octadecanoic acid.","definition_xrefs":["GOC:mah","GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"stearic acid binding","termid":"GO:0070540"}


id: GO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring the photoreceptor cell to its unexcited state after termination of the stimulus (photon).","definition_xrefs":["PMID:8316831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of rhodopsin mediated signaling pathway","termid":"GO:0022400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"deactivation of rhodopsin mediated signaling","synonyms":[{"name":"deactivation of rhodopsin mediated signalling","type":"exact"},{"name":"rod response recovery","type":"broad"}],"termid":"GO:0016059"}


id: SO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor gene cluster","type":"exact"},{"name":"vertebrate_immunoglobulin/T-cell receptor gene cluster","type":"exact"}],"termid":"SO:0000482"}


id: GO:2001273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose import in response to insulin stimulus (obsolete GO:2001273)","synonyms":[{"name":"regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001273"}


id: PBO:0083835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); involved in DNA mismatch repair during slow growth; weak similarity to Msh1p; structural study suggests Hsm3p is a scaffold protein for Rpt1p-Rpt2p complex formation; ortholog of human 19S subunit S5b","termid":"PBO:0083835"}


id: GO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH + H+.","definition_xrefs":["EC:1.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alanine dehydrogenase activity","secondary_identifiers":["RHEA:18405","MetaCyc:ALANINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"AlaDH","type":"related"},{"name":"L-alanine dehydrogenase activity","type":"related"},{"name":"L-alanine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"NAD-dependent alanine dehydrogenase activity","type":"related"},{"name":"NAD-linked alanine dehydrogenase activity","type":"related"},{"name":"NADH-dependent alanine dehydrogenase activity","type":"related"},{"name":"alanine oxidoreductase activity","type":"related"},{"name":"alpha-alanine dehydrogenase activity","type":"related"}],"termid":"GO:0000286"}


id: GO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"fibronectin binding","termid":"GO:0001968"}


id: PBO:0074516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A8","termid":"PBO:0074516"}


id: GO:0060297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of sarcomere organization","synonyms":[{"name":"regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060297"}


id: PBO:0052007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JDP2 antisense RNA 1","termid":"PBO:0052007"}


id: PBO:0051587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 19","termid":"PBO:0051587"}


id: FYPO:0000621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the onset of metaphase of mitosis begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of mitotic metaphase","synonyms":[{"name":"delayed mitotic metaphase","type":"exact"},{"name":"delayed onset of metaphase during mitotic cell cycle","type":"exact"},{"name":"delayed onset of mitotic metaphase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in metaphase: delayed","type":"related"},{"name":"mitotic metaphase delay","type":"exact"}],"termid":"FYPO:0000621"}


id: PBO:0083850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp45p (PM/SCL-75, EXOSC9); protein abundance increases in response to DNA replication stress","termid":"PBO:0083850"}


id: GO:0010316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric complex that catalyzes the pyrophosphate-dependent phosphorylation of D-fructose 6-phosphate into D-fructose 1,6-bisphosphate.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex","synonyms":[{"name":"PFK complex","type":"related"}],"termid":"GO:0010316"}


id: SO:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of double stranded RNA where the bases do not conform to WC base pairing. The loop is closed on both sides by canonical base pairing. If the interruption to base pairing occurs on one strand only, it is known as a bulge.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_internal_loop","synonyms":[{"name":"RNA internal loop","type":"exact"}],"termid":"SO:0000020"}


id: GO:0042168
data:
  {"annotated_genes":["SJAG_02896","SJAG_00366","SJAG_04109","SJAG_01786","SJAG_00097","SJAG_03173","SJAG_04397","SJAG_01192","SJAG_01372","SJAG_05283","SJAG_01841","SJAG_03961","SJAG_02876","SJAG_04944","SJAG_03862","SJAG_01155"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105466,88804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[101037,109932,112729,91454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[102485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[90073,67322,88459,113080,91456,92060,87903,86504],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[93516,111495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.","definition_xrefs":["GOC:jl","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"haem metabolic process","type":"exact"},{"name":"haem metabolism","type":"exact"},{"name":"heme metabolism","type":"exact"}],"termid":"GO:0042168","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: GO:0036261
data:
  {"annotated_genes":["SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91726],"is_not":false,"summary":null,"term":"GO:0036261"}]},"cv_name":"biological_process","definition":"Hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. This type of cap modification occurs on small nuclear RNAs (snRNAs) and small nucleolar RNAs (snoRNAs) and is dependent on prior guanine-N7 methylation.","definition_xrefs":["GOC:rl","PMID:11983179","PMID:18775984","GOC:krc","GOC:BHF","GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"7-methylguanosine cap hypermethylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"TMG cap formation","type":"exact"},{"name":"conversion of m(7)G to m(3)G","type":"exact"},{"name":"hypermethylation of snRNA cap","type":"narrow"},{"name":"hypermethylation of snoRNA cap","type":"narrow"},{"name":"m(7)G cap hypermethylation","type":"exact"},{"name":"snRNA capping","type":"narrow"},{"name":"snoRNA capping","type":"narrow"}],"termid":"GO:0036261","terms_by_termid":{"GO:0036261":null}}


id: GO:1901071
data:
  {"annotated_genes":["SJAG_00620","SJAG_00978","SJAG_00442","SJAG_04868","SJAG_03013","SJAG_04728","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[97298,87303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[100507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006038"},{"annotations":[98592,83662,84018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034221"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosamine-containing compounds (glucosamines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_03013":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucosamine-containing compound metabolism","type":"exact"},{"name":"glucosamines metabolic process","type":"exact"},{"name":"glucosamines metabolism","type":"exact"}],"termid":"GO:1901071","terms_by_termid":{"GO:0006038":null,"GO:0034217":null,"GO:0034221":null,"GO:0034232":null}}


id: PBO:0057017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 105-2","termid":"PBO:0057017"}


id: PBO:0082621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a heterodimeric Poc4p-Irc25p chaperone; involved in assembly of alpha subunits into the 20S proteasome; may regulate formation of proteasome isoforms with alternative subunits under different conditions; upregulates proteasome assembly in response to the unfolded protein response activated by mistargeting of proteins (UPRam)","termid":"PBO:0082621"}


id: GO:0018992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in an organism's germ line.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line sex determination","termid":"GO:0018992"}


id: PBO:0039999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 11","termid":"PBO:0039999"}


id: GO:0050935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an iridophore. Iridophores are pigment cells derived from the neural crest. They contain guanidine or other purine crystals deposited in stacks called reflecting platets or iridisomes. This gives them a silver, gold, or iridescent appearance.","definition_xrefs":["GOC:mh","PMID:11858836","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iridophore differentiation","synonyms":[{"name":"iridophore cell differentiation","type":"exact"}],"termid":"GO:0050935"}


id: PBO:0080732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC3 antisense RNA 1","termid":"PBO:0080732"}


id: PBO:0077081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOPBP1 interacting checkpoint and replication regulator","termid":"PBO:0077081"}


id: PBO:0073528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 1","termid":"PBO:0073528"}


id: FYPO:0005335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through mitotic cell cycle arrest at the mitotic G2/M phase transition occurs abnormally when the cell is subject to glucose starvation.","definition_xrefs":["PMID:26804466","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose deprivation","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose limitation","type":"related"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during glucose depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during glucose starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during glucose starvation","type":"related"}],"termid":"FYPO:0005335"}


id: PBO:0055219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2645","termid":"PBO:0055219"}


id: PBO:0039096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase like 2","termid":"PBO:0039096"}


id: GO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + cholesterol + O2 = 25-hydroxycholesterol + A + H2O.","definition_xrefs":["EC:1.14.99.38","RHEA:21104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholesterol 25-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.99.38-RXN","KEGG_REACTION:R07218"],"synonyms":[{"name":"cholesterol 25-monooxygenase activity","type":"related"},{"name":"cholesterol,hydrogen-donor:oxygen oxidoreductase (25-hydroxylating) activity","type":"related"}],"termid":"GO:0001567"}


id: GO:0102506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanin betaine + ferulate + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14432"],"termid":"GO:0102506"}


id: GO:1900814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monodictyphenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"monodictyphenone metabolic process","termid":"GO:1900813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"monodictyphenone catabolic process","synonyms":[{"name":"monodictyphenone breakdown","type":"exact"},{"name":"monodictyphenone catabolism","type":"exact"},{"name":"monodictyphenone degradation","type":"exact"}],"termid":"GO:1900814"}


id: GO:1904041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cystathionine beta-synthase activity.","definition_xrefs":["PMID:24416422","GO_REF:0000059","GOC:BHF","GOC:hal","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cystathionine beta-synthase activity","synonyms":[{"name":"regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"regulation of beta-thionase activity","type":"exact"},{"name":"regulation of methylcysteine synthase activity","type":"exact"},{"name":"regulation of serine sulfhydrase activity","type":"exact"},{"name":"regulation of serine sulfhydrylase activity","type":"exact"}],"termid":"GO:1904041"}


id: FYPO:0000490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion organization","termid":"FYPO:0000809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitochondrial genome maintenance","synonyms":[{"name":"loss of mitochondrial DNA","type":"narrow"},{"name":"mitochondrial DNA depletion","type":"narrow"},{"name":"mitochondrial genome maintenance: abnormal","type":"related"}],"termid":"FYPO:0000490"}


id: PBO:0088607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family","termid":"PBO:0088607"}


id: PBO:0066877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 177","termid":"PBO:0066877"}


id: GO:0016094
data:
  {"annotated_genes":["SJAG_00554","SJAG_02163","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93497,95757,103928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["GOC:go_curators","PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyprenol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol anabolism","type":"exact"},{"name":"polyprenol biosynthesis","type":"exact"},{"name":"polyprenol formation","type":"exact"},{"name":"polyprenol synthesis","type":"exact"}],"termid":"GO:0016094","terms_by_termid":{"GO:0019408":null}}


