# terms

id: PBO:0039937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 1A","termid":"PBO:0039937"}


id: PBO:0034705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase subunit Rad15","termid":"PBO:0034705"}


id: PBO:0054417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1813","termid":"PBO:0054417"}


id: GO:0033344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cholesterol efflux","synonyms":[{"name":"cholesterol export","type":"exact"}],"termid":"GO:0033344"}


id: GO:1905298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal epithelial cell development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA","PMID:23904268","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"intestinal epithelial cell development","termid":"GO:0060576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal epithelial cell development","termid":"GO:1905298"}


id: PBO:0083465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MRPL38","termid":"PBO:0083465"}


id: PBO:0044205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 3","termid":"PBO:0044205"}


id: PBO:0091738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin A1-like ortholog, implicated in endocytosis","termid":"PBO:0091738"}


id: GO:0061075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural retina development","termid":"GO:0061074"},{"relation_name":"is_a","term_name":"positive regulation of retina development in camera-type eye","termid":"GO:1902868"},{"relation_name":"positively_regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural retina development","termid":"GO:0061075"}


id: GO:0060264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:rl","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of respiratory burst","termid":"GO:0060263"},{"relation_name":"regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060264"}


id: PBO:0005214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Rrp5 (predicted)","termid":"PBO:0005214"}


id: PBO:0004689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10 (predicted)","termid":"PBO:0004689"}


id: PBO:0031678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031678"}


id: GO:0035022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rac protein signal transduction","termid":"GO:0035020"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rac protein signal transduction","termid":"GO:0016601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Rac protein signal transduction","synonyms":[{"name":"activation of Rac protein signal transduction","type":"narrow"},{"name":"stimulation of Rac protein signal transduction","type":"narrow"},{"name":"up regulation of Rac protein signal transduction","type":"exact"},{"name":"up-regulation of Rac protein signal transduction","type":"exact"},{"name":"upregulation of Rac protein signal transduction","type":"exact"}],"termid":"GO:0035022"}


id: PBO:0087535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis; subunits of the phosphopantothenoylcysteine decarboxylase (PPCDC) complex are: Cab3p, Sis2p, Vhs3p, while the subunits of the CoA-synthesizing protein complex (CoA-SPC) are: Cab2p, Cab3p, Cab4p, and Cab5p as well as Sis2p and Vhs3p; null mutant lethality is complemented by E. coli coaBC","termid":"PBO:0087535"}


id: GO:0001098
data:
  {"annotated_genes":["SJAG_00159","SJAG_00448","SJAG_02691","SJAG_04933","SJAG_01610","SJAG_03118","SJAG_01707","SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[71963,76639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[75155,70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[76792,75314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[75189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of the RNA polymerase core enzyme and the basal transcription factor(s), the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00159":null,"SJAG_00448":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_02691":null,"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"basal transcription machinery binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0001098","terms_by_termid":{"GO:0000993":null,"GO:0001097":null,"GO:0001139":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0042888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 410","termid":"PBO:0042888"}


id: PBO:0081864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 800","termid":"PBO:0081864"}


id: GO:0072167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"mesonephric tubule formation","termid":"GO:0072172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric tubule identity","termid":"GO:0072167"}


id: PBO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(9)(q12)","termid":"PBO:0047914"}


id: PR:G2TRS4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C36.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.13","synonyms":[{"name":"Spom972h-SPBC36.13","type":"exact"}],"termid":"PR:G2TRS4"}


id: GO:0071893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to nephric duct formation.","definition_xrefs":["GOC:mah","GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in nephric duct formation (obsolete GO:0071893)","synonyms":[{"name":"BMP signalling pathway involved in nephric duct formation","type":"exact"}],"termid":"GO:0071893"}


id: PBO:0047356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein, pseudogene","termid":"PBO:0047356"}


id: PBO:0076329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin like 2","termid":"PBO:0076329"}


id: GO:0008902
data:
  {"annotated_genes":["SJAG_02421","SJAG_02420","SJAG_04282"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109628,109634,112104],"is_not":false,"summary":null,"term":"GO:0008902"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-amino-5-hydroxymethyl-2-methylpyrimidine + ATP = 4-amino-2-methyl-5-phosphomethylpyrimidine + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.49","RHEA:23096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02420":null,"SJAG_02421":null,"SJAG_04282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"hydroxymethylpyrimidine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:OHMETPYRKIN-RXN","KEGG_REACTION:R03471"],"synonyms":[{"name":"ATP:4-amino-5-hydroxymethyl-2-methylpyrimidine 5-phosphotransferase activity","type":"related"},{"name":"hydroxymethylpyrimidine kinase (phosphorylating)","type":"related"}],"termid":"GO:0008902","terms_by_termid":{"GO:0008902":null}}


id: PBO:0060977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroguidin","termid":"PBO:0060977"}


id: PBO:0004053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cysteine desulfurase Nfs1 (predicted)","termid":"PBO:0004053"}


id: PBO:0066651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor like","termid":"PBO:0066651"}


id: PBO:0084775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein of unknown function; major constituent of the outer membrane, extending into the intermembrane space; interacts with porin (Por1p) and with Om14p; imported via the presequence pathway involving the TOM and TIM23 complexes, then assembled in the outer membrane by Mim1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0084775"}


id: PBO:0072642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of telomere elongation helicase 1","termid":"PBO:0072642"}


id: PBO:0088776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap111","termid":"PBO:0088776"}


id: GO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-27 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-27 receptor binding","synonyms":[{"name":"IL-27","type":"narrow"},{"name":"interleukin-27 receptor ligand","type":"narrow"}],"termid":"GO:0045523"}


id: PBO:0065872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family","termid":"PBO:0065872"}


id: GO:0035078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by the steroid hormone 20-hydroxyecdysone (ecdysone) that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death by hormones","termid":"GO:0035081"},{"relation_name":"part_of","term_name":"response to ecdysone","termid":"GO:0035075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by ecdysone","termid":"GO:0035078"}


id: PBO:0071228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 69","termid":"PBO:0071228"}


id: PBO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 97","termid":"PBO:0042865"}


id: PBO:0089292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a","termid":"PBO:0089292"}


id: GO:0099610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initiating cycle of an action potential. In vertebrate neurons this typically occurs at an axon hillock. Not all initiated axon potentials propagate.","definition_xrefs":["PMID:19439602","ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"action potential initiation","synonyms":[{"name":"action potential firing","type":"exact"},{"name":"action potential triggering","type":"exact"}],"termid":"GO:0099610"}


id: PBO:0069456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 721, pseudogene","termid":"PBO:0069456"}


id: PR:Q10309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipid-transporting ATPase IIA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00966","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-transporting ATPase C6C3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.06c","secondary_identifiers":["UniProtKB:Q10309"],"synonyms":[{"name":"Spom972h-ATP9A","type":"exact"}],"termid":"PR:Q10309"}


id: PBO:0075894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression of tumorigenicity 7","termid":"PBO:0075894"}


id: GO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Long, dynamic tubular channels, formed by invagination of the nuclear envelope, that extend deep into the nucleoplasm. The channels have an underlying lamina and are implicated in functioning in signaling and transport.","definition_xrefs":["GOC:jl","PMID:17959832","PMID:9024685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleoplasmic reticulum","synonyms":[{"name":"nuclear channels","type":"exact"}],"termid":"GO:0044195"}


id: PBO:0074550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 3","termid":"PBO:0074550"}


id: PBO:0089128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein/dubious","termid":"PBO:0089128"}


id: PATO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased strength","synonyms":[{"name":"weak","type":"exact"}],"termid":"PATO:0001779"}


id: PBO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methylase subunit Trm72 (predicted)","termid":"PBO:0013480"}


id: PATO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that inheres in a part of a surface. An object can have different surface shapes on different parts of its surface.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002004 surface shape (obsolete PATO:0002004)","termid":"PATO:0002004"}


id: PBO:0056894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIDEAS antisense RNA 1","termid":"PBO:0056894"}


id: PBO:0079291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 9","termid":"PBO:0079291"}


id: GO:0052119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in host environment (obsolete GO:0052119)","synonyms":[{"name":"negative energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052119"}


id: FYPO:0005915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the portion of ribosomal DNA encoding 5S rRNA. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:25798942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at 5S rRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at 5S rRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at 5S rRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in 5S rRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at 5S rRNA genes","type":"exact"}],"termid":"FYPO:0005915"}


id: PATO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000459 relative quantity value (obsolete PATO:0000459)","termid":"PATO:0000459"}


id: PBO:0031589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_apoptosis","termid":"PBO:0031589"}


id: SO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that has been processed \\\"incorrectly\\\", for example by the failure of splicing of one or more exons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aberrant_processed_transcript","synonyms":[{"name":"aberrant processed transcript","type":"exact"}],"termid":"SO:0000681"}


id: GO:0060760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of a response to cytokine stimulus.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"positively_regulates","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"}


id: GO:0030402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete matrilysin-2 activity (obsolete GO:0030402)","synonyms":[{"name":"MMP-26","type":"exact"},{"name":"matrilysin-2 activity","type":"exact"},{"name":"matrix metalloproteinase 26","type":"exact"}],"termid":"GO:0030402"}


id: GO:0048702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neurocranium are generated and organized during the embryonic phase. The neurocranium is the portion of the vertebrate skull surrounding the brain.","definition_xrefs":["GOC:dsf","PMID:16049113","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic cranial skeleton morphogenesis","termid":"GO:0048701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic neurocranium morphogenesis","synonyms":[{"name":"embryonic braincase morphogenesis","type":"exact"},{"name":"embryonic chondrocranium morphogenesis","type":"exact"}],"termid":"GO:0048702"}


id: PBO:0071482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 23","termid":"PBO:0071482"}


id: GO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"bicarbonate transport","synonyms":[{"name":"hydrogencarbonate transport","type":"exact"}],"termid":"GO:0015701"}


id: GO:0070948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a target cell, the directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"regulates","term_name":"neutrophil mediated cytotoxicity","termid":"GO:0070942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated cytotoxicity","synonyms":[{"name":"regulation of neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070948"}


id: GO:0070979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at position 11 of the ubiquitin monomers. K11-linked polyubiquitination targets the substrate protein for degradation. The anaphase-promoting complex promotes the degradation of mitotic regulators by assembling K11-linked polyubiquitin chains.","definition_xrefs":["PMID:21113135","PMID:20655260","GOC:jsg","GOC:pr","GOC:sp","PMID:18485873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K11-linked ubiquitination","termid":"GO:0070979"}


id: GO:1900218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.","definition_xrefs":["GOC:TermGenie","GOC:yaf","GOC:mtg_kidney_jan10","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900217"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"down regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"down regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"down regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"down regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"down-regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"downregulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of apoptotic process involved in metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"inhibition of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"negative regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900218"}


id: PBO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poikiloderma with neutropenia","termid":"PBO:0011982"}


id: GO:0045281
data:
  {"annotated_genes":["SJAG_00260","SJAG_02398","SJAG_01671","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84683,109218,84305,112852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005749"}]},"cv_name":"cellular_component","definition":"A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind or react with quinones.","definition_xrefs":["InterPro:IPR000701","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"respiratory chain complex II","termid":"GO:0045273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"succinate dehydrogenase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045281","terms_by_termid":{"GO:0005749":null}}


id: GO:0097705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to pulsatile fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:bc","PMID:21768538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to pulsatile fluid shear stress","termid":"GO:0097703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to pulsatile fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to pulsatile fluid shear stress","type":"exact"}],"termid":"GO:0097705"}


id: PBO:0057940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3665","termid":"PBO:0057940"}


id: GO:0030956
data:
  {"annotated_genes":["SJAG_01577","SJAG_02721","SJAG_05560"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92352,107249,114488],"is_not":false,"summary":null,"term":"GO:0030956"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses glutamyl-tRNA(Gln) amidotransferase activity, and therefore creates Gln-tRNA by amidating Glu-tRNA; usually composed of 3 subunits: A, B, and C. Note that the C subunit may not be required in all organisms.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glutamyl-tRNA(Gln) amidotransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AdT","type":"related"},{"name":"GatCAB","type":"narrow"},{"name":"GatFAB","type":"narrow"}],"termid":"GO:0030956","terms_by_termid":{"GO:0030956":null}}


id: PBO:0057965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3686","termid":"PBO:0057965"}


id: PATO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000506 absolute sensitivity value (obsolete PATO:0000506)","termid":"PATO:0000506"}


id: PBO:0046184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 3","termid":"PBO:0046184"}


id: PBO:0086094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein possibly involved in assembly of actin patches; interacts with an actin assembly factor Las17p and with the SH3 domains of Type I myosins Myo3p and Myo5p; localized predominantly to cortical actin patches","termid":"PBO:0086094"}


id: GO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products.","definition_xrefs":["EC:3.1.22.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"deoxyribonuclease II activity","secondary_identifiers":["MetaCyc:3.1.22.1-RXN"],"synonyms":[{"name":"DNase II activity","type":"related"},{"name":"acid DNase activity","type":"related"},{"name":"acid deoxyribonuclease activity","type":"related"},{"name":"deoxyribonucleate 3'-nucleotidohydrolase activity","type":"related"},{"name":"lysosomal DNase II activity","type":"narrow"},{"name":"pancreatic DNase II","type":"related"}],"termid":"GO:0004531"}


id: GO:1901351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:dgf","PMID:12869188","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"regulation of phosphatidylglycerol formation","type":"exact"},{"name":"regulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901351"}


id: FYPO:0000847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased protein degradation during vegetative growth","synonyms":[{"name":"increased protein breakdown during vegetative growth","type":"exact"},{"name":"increased protein catabolic process during vegetative growth","type":"exact"},{"name":"increased protein catabolism during vegetative growth","type":"exact"},{"name":"increased protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000847"}


id: PBO:0040122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 9","termid":"PBO:0040122"}


id: FYPO:0000034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis is abnormal. Endocytosis is a vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah","GO:0006897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal endocytosis during vegetative growth","synonyms":[{"name":"abnormal actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"abnormal endocytosis during mitotic cell cycle","type":"related"},{"name":"abnormal protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis defects during vegetative growth","type":"exact"},{"name":"endocytosis: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000034"}


id: PBO:0054955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2369","termid":"PBO:0054955"}


id: FYPO:0001812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered 5-phosphoribosyl diphosphate level","termid":"FYPO:0001811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased 5-phosphoribosyl diphosphate level","synonyms":[{"name":"increased 5-O-phosphono-alpha-D-ribofuranosyl diphosphate level","type":"exact"},{"name":"increased 5-phosphoribosyl diphosphate accumulation","type":"related"},{"name":"increased 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"increased 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"increased cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0001812"}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: FYPO:0000203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which ergosterol biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ergosterol biosynthetic process","synonyms":[{"name":"abnormal ergosterol biosynthesis","type":"exact"},{"name":"abnormal ergosterol biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal ergosterol biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0000203"}


id: PBO:0066241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 48","termid":"PBO:0066241"}


id: PBO:0087482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromosomal passenger complex (CPC); CPC is comprised of Ipl1p-Sli15p-Bir1p-Nbl1p and regulates chromosome segregation; required for chromosome bi-orientation and for spindle assembly checkpoint activation upon reduced sister kinetochore tension; relative distribution to shortened microtubules increases upon DNA replication stress; sumoylated in an Mms21p-dependent manner; human survivin homolog","termid":"PBO:0087482"}


id: GO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond between peptides. Peptides are compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide stabilization activity (obsolete GO:0048191)","synonyms":[{"name":"peptide stabilization activity","type":"exact"}],"termid":"GO:0048191"}


id: PBO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.2","termid":"PBO:0004968"}


id: PBO:0079915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein like","termid":"PBO:0079915"}


id: PBO:0051611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 alpha","termid":"PBO:0051611"}


id: PBO:0082656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; involved in transcription initiation and elongation and in mRNA degradation; conserved lysine in human homolog of Not3p and Not5p is mutated in cancers","termid":"PBO:0082656"}


id: GO:1990002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxyacetone + NADP+ = H+ + methylglyoxal + NADPH.","definition_xrefs":["PMID:16077126","RHEA:27986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methylglyoxal reductase (NADPH-dependent, acetol producing)","secondary_identifiers":["MetaCyc:RXN0-4281"],"termid":"GO:1990002"}


id: PBO:0041891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catsper channel auxiliary subunit zeta","termid":"PBO:0041891"}


id: PBO:0055431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2861","termid":"PBO:0055431"}


id: PBO:0086962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of the Fps1p glycerol channel; under nonstress conditions, binds to Fps1p to positively regulate glycerol transport; under osmotic stress, multiple phosphorylation by Hog1p causes Ask10p to dissociate from Fps1p; forms homodimers and heterodimerizes with paralog Rgc1p; phosphorylated in response to oxidative stress; has a role in destruction of Ssn8p; associates with RNA polymerase II holoenzyme","termid":"PBO:0086962"}


id: PBO:0057725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1302-9 host gene","termid":"PBO:0057725"}


id: GO:0051150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation.","definition_xrefs":["CL:0000192","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"}


id: PR:Q9UR07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-11 gene.","definition_xrefs":["UniProtKB:Q9UR07","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-11 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.17","synonyms":[{"name":"Spom972h-Tf2-11","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR07"}


id: GO:0098025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multiprotein component at the distal (head) end of the virus tail to which fibers of tailed viruses may be attached.","definition_xrefs":["GOC:bm","VZ:3957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, baseplate","synonyms":[{"name":"bacteriophage baseplate","type":"narrow"},{"name":"tail structure","type":"related"},{"name":"tail tip","type":"related"}],"termid":"GO:0098025"}


id: PBO:0053144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6F, pseudogene","termid":"PBO:0053144"}


id: PBO:0056823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14A","termid":"PBO:0056823"}


id: PBO:0083125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichyl pyrophosphate (Dol-P-P) phosphatase; cleaves the anhydride linkage in Dol-P-P; involved in  synthesis of Dol-P-P-linked oligosaccharide intermediate required for protein N-glycosylation; has a luminally oriented active site in the ER; mutation affects vesicular transport, membrane and cell wall biogenesis and lipid homeostasis","termid":"PBO:0083125"}


id: GO:0102976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol + NADP = versiconal hemiacetal + NADPH + H+.","definition_xrefs":["GOC:pz","EC:1.1.1.353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"versiconal reductase activity","secondary_identifiers":["MetaCyc:RXN-9491","RHEA:35699"],"termid":"GO:0102976"}


id: PBO:0036062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_during_vegetative_growth","termid":"PBO:0036062"}


id: GO:0000400
data:
  {"annotated_genes":["SJAG_02226","SJAG_02690","SJAG_02181","SJAG_02708","SJAG_02294","SJAG_04752","SJAG_02262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86340,88220,90386,90531,92624,96419,101951],"is_not":false,"summary":null,"term":"GO:0000400"},{"annotations":[90383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.","definition_xrefs":["ISBN:0815332181","PMID:15563464","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02181":null,"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"four-way junction DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Holliday junction binding","type":"exact"},{"name":"forked DNA binding","type":"broad"}],"termid":"GO:0000400","terms_by_termid":{"GO:0000400":null,"GO:0000402":null}}


id: GO:1905910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dauer entry.","definition_xrefs":["GO_REF:0000058","PMID:21531333","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dauer larval development","termid":"GO:0061067"},{"relation_name":"is_a","term_name":"regulation of dauer entry","termid":"GO:1905909"},{"relation_name":"negatively_regulates","term_name":"dauer entry","termid":"GO:0043053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dauer entry","synonyms":[{"name":"down regulation of dauer entry","type":"exact"},{"name":"down regulation of nematode entry into dormancy","type":"exact"},{"name":"down-regulation of dauer entry","type":"exact"},{"name":"down-regulation of nematode entry into dormancy","type":"exact"},{"name":"downregulation of dauer entry","type":"exact"},{"name":"downregulation of nematode entry into dormancy","type":"exact"},{"name":"inhibition of dauer entry","type":"narrow"},{"name":"inhibition of nematode entry into dormancy","type":"narrow"},{"name":"negative regulation of nematode entry into dormancy","type":"exact"}],"termid":"GO:1905910"}


id: PBO:0087897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; contains a N-terminal regulatory motif (RI) that acts as a cytoplasmic retention determinant and as an Asi dependent degron in the nucleus; undergoes proteolytic processing by SPS (Ssy1p-Ptr3p-Ssy5p)-sensor component Ssy5p in response to extracellular amino acids; activates transcription of amino acid permease genes and may have a role in tRNA processing; STP1 has a paralog, STP2, that arose from the whole genome duplication","termid":"PBO:0087897"}


id: GO:0060443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland are generated and organized. Morphogenesis refers to the creation of shape. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland morphogenesis","termid":"GO:0060443"}


id: PBO:0027275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_during_vegetative_growth","termid":"PBO:0027275"}


id: PBO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion/proton antiporter Kha1 (predicted)","termid":"PBO:0001153"}


id: GO:0033651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any member of a family of organelles as found in the cytoplasm of host cells, which are membrane-bounded and contain DNA. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plastid","termid":"GO:0033651"}


id: GO:0097390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 12 (CXCL12) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 12 production","synonyms":[{"name":"CXCL12 production","type":"exact"}],"termid":"GO:0097390"}


id: GO:0072690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of population growth during which single celled organisms reproduce by budding, fission, or other asexual methods.","definition_xrefs":["GOV:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-celled organism vegetative growth phase","secondary_identifiers":["GO:0062178"],"synonyms":[{"name":"stationary phase","type":"narrow"},{"name":"vegetative growth of a single-celled organism","type":"exact"}],"termid":"GO:0072690"}


id: PBO:0059683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 49","termid":"PBO:0059683"}


id: GO:0006882
data:
  {"annotated_genes":["SJAG_04584","SJAG_00923","SJAG_02847","SJAG_01803","SJAG_01990","SJAG_00328","SJAG_00668","SJAG_00222","SJAG_02080","SJAG_03528","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85969,89404,89405,90371,91873,95906,97012,98578,99408,100157,110392],"is_not":false,"summary":null,"term":"GO:0006882"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of zinc ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_00668":null,"SJAG_00923":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02080":null,"SJAG_02847":null,"SJAG_03528":null,"SJAG_04584":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular zinc ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular zinc ion homeostasis","type":"exact"},{"name":"zinc homeostasis","type":"broad"}],"termid":"GO:0006882","terms_by_termid":{"GO:0006882":null}}


id: PBO:0058203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4496","termid":"PBO:0058203"}


id: GO:0042176
data:
  {"annotated_genes":["SJAG_00475","SJAG_04546","SJAG_03699","SJAG_00071","SJAG_01210","SJAG_02244","SJAG_04477","SJAG_01533","SJAG_01131","SJAG_00712","SJAG_00052","SJAG_02723","SJAG_03048","SJAG_01544","SJAG_00766","SJAG_00642","SJAG_04990","SJAG_04088","SJAG_01528","SJAG_01489","SJAG_02485"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68876],"is_not":false,"summary":null,"term":"GO:0042176"},{"annotations":[98157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[102838,85925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[84439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[61290,67211,67013,65310,68687,68141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[92207,98178,107684,113166,102542,104818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[98179,107129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045732"},{"annotations":[95142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[92233,95614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061136"},{"annotations":[110687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GOC:jl","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01528":null,"SJAG_01533":null,"SJAG_01544":null,"SJAG_02244":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04088":null,"SJAG_04477":null,"SJAG_04546":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of protein catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1903362","GO:2000598"],"synonyms":[{"name":"regulation of cellular protein breakdown","type":"exact"},{"name":"regulation of cellular protein catabolic process","type":"exact"},{"name":"regulation of cellular protein catabolism","type":"exact"},{"name":"regulation of cellular protein degradation","type":"exact"},{"name":"regulation of cyclin breakdown","type":"narrow"},{"name":"regulation of cyclin catabolic process","type":"narrow"},{"name":"regulation of cyclin catabolism","type":"narrow"},{"name":"regulation of cyclin degradation","type":"narrow"},{"name":"regulation of degradation of cyclin","type":"narrow"},{"name":"regulation of protein breakdown","type":"exact"},{"name":"regulation of protein catabolism","type":"exact"},{"name":"regulation of protein degradation","type":"exact"}],"termid":"GO:0042176","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0042176":null,"GO:0045732":null,"GO:0061136":null,"GO:1901800":null,"GO:1904352":null,"GO:1905785":null,"GO:1905786":null}}


id: PR:O14013
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn5 gene.","definition_xrefs":["UniProtKB:O14013","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.10","synonyms":[{"name":"Spom972h-rrn5","type":"exact"}],"termid":"PR:O14013"}


id: PBO:0033790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033790"}


id: GO:0060918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of auxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Auxins are a group of plant hormones that regulates aspects of plant growth.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"auxin transport","termid":"GO:0060918"}


id: PBO:0089729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1","termid":"PBO:0089729"}


id: PBO:0034649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-globally_decreased_mitotic_recombination","termid":"PBO:0034649"}


id: PR:Q10281
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein subunit beta-2-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19868:SF0","OMA:SCHPO01018","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit beta-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.15","secondary_identifiers":["UniProtKB:Q10281"],"synonyms":[{"name":"Spom972h-GNB2L1","type":"exact"},{"name":"receptor of activated protein kinase C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10281"}


id: PBO:0084512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family with seven members; in S. cerevisiae, family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane and at the nuclear envelope; regulated by sterol binding; OSH2 has a paralog, SWH1, that arose from the whole genome duplication","termid":"PBO:0084512"}


id: PATO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The specific wavelength of light emitted by a fluorescent molecule, such as a labelled probe, upon absorption of light at the (higher) excitation wavelength.","definition_xrefs":["web:http://www.expertglossary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emmision wavelength","termid":"PATO:0002059"}


id: GO:1903785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine across a membrane.","definition_xrefs":["PMID:20944394","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine transport","termid":"GO:0015829"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-valine transmembrane transport","termid":"GO:1903785"}


id: GO:0140272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex from a different species, for example a pathogen molecule binding to a host protein.","definition_xrefs":["PMID:28861068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"exogenous protein binding","termid":"GO:0140272"}


id: GO:0042342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanogenic glycosides, any glycoside containing a cyano group that is released as hydrocyanic acid on acid hydrolysis; such compounds occur in the kernels of various fruits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"cyanogenic glycoside metabolic process","termid":"GO:0042341"},{"relation_name":"is_a","term_name":"nitrile catabolic process","termid":"GO:0050899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"cyanogenic glycoside catabolic process","synonyms":[{"name":"cyanogenic glycoside breakdown","type":"exact"},{"name":"cyanogenic glycoside catabolism","type":"exact"},{"name":"cyanogenic glycoside degradation","type":"exact"}],"termid":"GO:0042342"}


id: PBO:0058422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4791","termid":"PBO:0058422"}


id: PBO:0003518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase (predicted)","termid":"PBO:0003518"}


id: GO:0007094
data:
  {"annotated_genes":["SJAG_02169","SJAG_01330","SJAG_04999","SJAG_01297","SJAG_01679","SJAG_03681","SJAG_03126","SJAG_01837","SJAG_04884","SJAG_04259","SJAG_02336","SJAG_00883","SJAG_04699","SJAG_03353","SJAG_01082","SJAG_04126","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86252,95182,97588,102197,105850,109834,110560,111619,112764],"is_not":false,"summary":null,"term":"GO:0007094"},{"annotations":[103125,99733,104172,109830,110320,107939,86249,111981,95326],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[89833],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112768],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle checkpoint that delays mitotic sister chromatid separation and consequently the mitotic metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle. Spindle assembly checkpoint signaling begins with the activated Mph family kinase, and results in the inhibition of the Anaphase Promoting Complex and its activator Sleepy/Cdc20 by the mitotic checkpoint complex (MCC).","definition_xrefs":["PMID:12360190","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic metaphase/anaphase transition","termid":"GO:0045841"},{"relation_name":"is_a","term_name":"spindle assembly checkpoint signaling","termid":"GO:0071173"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0044772","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902420","GO:0072480","GO:0044810"],"synonyms":[{"name":"Dma1-dependent checkpoint","type":"narrow"},{"name":"Mad2-dependent checkpoint","type":"narrow"},{"name":"SAC-independent checkpoint","type":"narrow"},{"name":"mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"mitotic checkpoint","type":"exact"},{"name":"mitotic spindle assembly checkpoint","type":"exact"},{"name":"mitotic spindle assembly checkpoint signalling","type":"exact"},{"name":"signal transduction involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signal transduction involved in SAC-independent checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic spindle assembly checkpoint","type":"exact"},{"name":"signaling cascade involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signaling cascade involved in SAC-independent checkpoint","type":"narrow"},{"name":"signaling pathway involved in Dma1-dependent checkpoint","type":"related"},{"name":"signaling pathway involved in SAC-independent checkpoint","type":"related"},{"name":"signalling cascade involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signalling cascade involved in SAC-independent checkpoint","type":"narrow"},{"name":"signalling pathway involved in Dma1-dependent checkpoint","type":"related"},{"name":"signalling pathway involved in SAC-independent checkpoint","type":"related"}],"termid":"GO:0007094","terms_by_termid":{"GO:0007094":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: GO:0016338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"related"}],"termid":"GO:0016338"}


id: GO:0019751
data:
  {"annotated_genes":["SJAG_03739","SJAG_00237","SJAG_02305","SJAG_02706","SJAG_04986","SJAG_01148","SJAG_04048","SJAG_04192","SJAG_02321","SJAG_01970","SJAG_04870","SJAG_03098","SJAG_03275","SJAG_01057","SJAG_00880","SJAG_00409","SJAG_03409","SJAG_04067","SJAG_04178","SJAG_02429","SJAG_04264","SJAG_01154","SJAG_01012","SJAG_01702","SJAG_03609","SJAG_00244","SJAG_04320","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[101040,84203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[109867,89612,102379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[112442,88672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[65395,88673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006071"},{"annotations":[84098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[65753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[111106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006020"},{"annotations":[89001,94532,111107,113102,114906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[84204,111108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[67880,111109,102797,102796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043647"},{"annotations":[100889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"},{"annotations":[88396,93377,92602,101392,101862,105655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[95998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006670"},{"annotations":[104442,85824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["PMID:30240188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_00321":null,"SJAG_00409":null,"SJAG_00880":null,"SJAG_01012":null,"SJAG_01057":null,"SJAG_01148":null,"SJAG_01154":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_02305":null,"SJAG_02321":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_03409":null,"SJAG_03609":null,"SJAG_03739":null,"SJAG_04048":null,"SJAG_04067":null,"SJAG_04178":null,"SJAG_04192":null,"SJAG_04264":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyol metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol metabolic process","type":"exact"},{"name":"polyol metabolism","type":"exact"}],"termid":"GO:0019751","terms_by_termid":{"GO:0006020":null,"GO:0006021":null,"GO:0006062":null,"GO:0006071":null,"GO:0006114":null,"GO:0006670":null,"GO:0006729":null,"GO:0019563":null,"GO:0019564":null,"GO:0032958":null,"GO:0043647":null,"GO:0046512":null,"GO:0061613":null,"GO:0071543":null,"GO:0071545":null}}


id: GO:0060072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","PMID:17115074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"large conductance calcium-activated potassium channel activity","secondary_identifiers":["GO:0022895"],"synonyms":[{"name":"BK KCa channel activity","type":"exact"},{"name":"BK calcium-activated potassium channel activity","type":"exact"},{"name":"BK channel activity","type":"related"},{"name":"large conductance KCa channel activity","type":"exact"}],"termid":"GO:0060072"}


id: FYPO:0005950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in euchromatin","termid":"FYPO:0000854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"increased nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005950"}


id: PBO:0075517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle apparatus coiled-coil protein 1","termid":"PBO:0075517"}


id: PBO:0053505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 488","termid":"PBO:0053505"}


id: PBO:0017710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase involved in depalmitoylation (predicted)","termid":"PBO:0017710"}


id: PBO:0080485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5A","termid":"PBO:0080485"}


id: PR:Q9P771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane fusion protein prm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.03","synonyms":[{"name":"Spom972h-prm1","type":"exact"}],"termid":"PR:Q9P771"}


id: GO:0048172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of short-term neuronal synaptic plasticity","termid":"GO:0048172"}


id: PATO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000105 p h sensitivity (obsolete PATO:0000105)","termid":"PATO:0000105"}


id: GO:0019074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The packaging of viral RNA (single-stranded or double-stranded) into a nucleocapsid.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome packaging","termid":"GO:0019072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome packaging","termid":"GO:0019074"}


id: PBO:0079450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor 2, mitochondrial calcium regulator","termid":"PBO:0079450"}


id: PBO:0002548
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Mediator Component","termid":"PBO:0002548"}


id: PBO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 6","termid":"PBO:0046720"}


id: GO:1901166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell migration that is involved in autonomic nervous system development.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in autonomic nervous system development","termid":"GO:1901166"}


id: PR:Q92348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug183 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 183 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.03c","synonyms":[{"name":"Spom972h-mug183","type":"exact"}],"termid":"PR:Q92348"}


id: GO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor production","termid":"GO:0090270"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor production","termid":"GO:0090271"}


id: FYECO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ZnCl2","synonyms":[{"name":"zinc chloride added","type":"exact"}],"termid":"FYECO:0000173"}


id: PBO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 1 pseudogene 1","termid":"PBO:0048030"}


id: PR:O74519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- naa50 gene.","definition_xrefs":["UniProtKB:O74519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C663.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.13c","synonyms":[{"name":"Spom972h-naa50","type":"exact"}],"termid":"PR:O74519"}


id: PBO:0079775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UGDH antisense RNA 1","termid":"PBO:0079775"}


id: GO:0072313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular epithelial cell over time, from its formation to the mature structure. Metanephric glomerular epithelial cells are specialized epithelial cells that form part of the metanephric glomerulus; there are two types, metanephric glomerular parietal epithelial cells and metanephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"}


id: PBO:0074534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA G2","termid":"PBO:0074534"}


id: GO:0072303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"positively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular metanephric mesangial cell proliferation","termid":"GO:0072303"}


id: FYPO:0001401
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[115402,115403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115385,115381,115373,115374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell division site","type":"exact"},{"name":"abnormal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0001401","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0003946":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: PBO:0035825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_ubiquitination_during_vegetative_growth","termid":"PBO:0035825"}


id: PBO:0040418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 3","termid":"PBO:0040418"}


id: GO:0006026
data:
  {"annotated_genes":["SJAG_03013","SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87303,97298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan breakdown","type":"exact"},{"name":"aminoglycan catabolism","type":"exact"},{"name":"aminoglycan degradation","type":"exact"}],"termid":"GO:0006026","terms_by_termid":{"GO:0034232":null}}


id: MOD:01002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyryl","termid":"MOD:01002"}


id: PBO:0034588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_galactose-specific_flocculation","termid":"PBO:0034588"}


id: FYPO:0000561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G1 phase progression","synonyms":[{"name":"mitotic cell cycle progression in G1 phase: normal","type":"related"},{"name":"normal G1 phase progression during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G1 phase progression during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle progression in G1","type":"exact"}],"termid":"FYPO:0000561"}


id: GO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide antigen to the antigen binding groove of an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex assembly","termid":"GO:0002398"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"peptide antigen assembly with MHC class Ib protein complex","termid":"GO:0002492"}


id: PBO:0086860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative S-adenosylmethionine-dependent methyltransferase; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YMR209C is not an essential gene","termid":"PBO:0086860"}


id: GO:0008149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["MetaCyc:PABASYN-CPLX","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete para-aminobenzoic acid (PABA) synthase (obsolete GO:0008149)","synonyms":[{"name":"para-aminobenzoic acid (PABA) synthase","type":"exact"}],"termid":"GO:0008149"}


id: GO:0042423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"},{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catecholamine biosynthetic process","secondary_identifiers":["Wikipedia:Catecholamines"],"synonyms":[{"name":"catecholamine anabolism","type":"exact"},{"name":"catecholamine biosynthesis","type":"exact"},{"name":"catecholamine formation","type":"exact"},{"name":"catecholamine synthesis","type":"exact"}],"termid":"GO:0042423"}


id: GO:0006368
data:
  {"annotated_genes":["SJAG_01149","SJAG_02319","SJAG_00913","SJAG_04353","SJAG_04933","SJAG_01610","SJAG_00483","SJAG_00540","SJAG_00119","SJAG_03061","SJAG_01151","SJAG_02209","SJAG_03211","SJAG_01707","SJAG_00914","SJAG_02873","SJAG_03967","SJAG_04038","SJAG_00320","SJAG_04670","SJAG_03118","SJAG_00293","SJAG_03006","SJAG_02551","SJAG_02238","SJAG_02691","SJAG_02393","SJAG_02314","SJAG_03128","SJAG_01713","SJAG_03944","SJAG_00925","SJAG_03481","SJAG_00139","SJAG_02097","SJAG_00150","SJAG_02698","SJAG_02416","SJAG_04257"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87517,88208,89582,90882,94896,95675,101358,102042,102712,103605,103801,107444,109211,110127,110453],"is_not":false,"summary":null,"term":"GO:0006368"},{"annotations":[97567],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001193"},{"annotations":[114021],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034244"},{"annotations":[91486,104960,101216,98866,101919,111363,113094],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032968"},{"annotations":[109643,113004,85587,86770,89011,110603,114929,104701,91160,107236,90259,104706,87944,99397,112301],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00483":null,"SJAG_00540":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01713":null,"SJAG_02097":null,"SJAG_02209":null,"SJAG_02238":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02393":null,"SJAG_02416":null,"SJAG_02551":null,"SJAG_02691":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_03944":null,"SJAG_03967":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04353":null,"SJAG_04670":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA elongation from Pol II promoter","type":"exact"},{"name":"RNA polymerase II transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase II promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006368","terms_by_termid":{"GO:0001193":null,"GO:0006368":null,"GO:0032968":null,"GO:0034244":null,"GO:0140673":null}}


id: FYPO:0004443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to prospore membrane during meiosis II","type":"exact"}],"termid":"FYPO:0004443"}


id: GO:0050351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + trimetaphosphate = 2 H+ + triphosphate.","definition_xrefs":["EC:3.6.1.2","RHEA:11088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"trimetaphosphatase activity","secondary_identifiers":["KEGG_REACTION:R02504","MetaCyc:TRIMETAPHOSPHATASE-RXN"],"synonyms":[{"name":"inorganic trimetaphosphatase activity","type":"related"},{"name":"trimetaphosphate hydrolase activity","type":"related"}],"termid":"GO:0050351"}


id: PBO:0046707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETV5 antisense RNA 1","termid":"PBO:0046707"}


id: GO:1990358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multifunctional supermolecular complex, containing several proteins with hemicellulase activity. Functions to hydrolyze hemicellulose.","definition_xrefs":["PMID:16769147","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"xylanosome","synonyms":[{"name":"xylanolytic complex","type":"exact"}],"termid":"GO:1990358"}


id: PBO:0082909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulfurase (Nfs1p) activator; essential for the formation of the persulfide intermediate at the desulfurase active site during pyridoxal phosphate-dependent desulfuration of cysteine; required for mitochondrial iron-sulfur cluster biosynthesis; exclusive to eukaryotes, implicated as eukaryotic supplement to the bacterium-derived Fe-S cluster (ISC) assembly apparatus; involved in regulation of iron metabolism; member of the LYR protein family","termid":"PBO:0082909"}


id: PBO:0004345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HVA22/TB2/DP1 family protein","termid":"PBO:0004345"}


id: PBO:0042233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 5 (pseudogene)","termid":"PBO:0042233"}


id: MOD:00421
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on a carbon with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"C-glycosylated residue","synonyms":[{"name":"CGlycoRes","type":"exact"}],"termid":"MOD:00421"}


id: GO:0050044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose 6-phosphate = D-tagatose 6-phosphate.","definition_xrefs":["RHEA:13033","EC:5.3.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"galactose-6-phosphate isomerase activity","secondary_identifiers":["MetaCyc:LACTOSE-6-PHOSPHATE-ISOMERASE-RXN","KEGG_REACTION:R03240"],"synonyms":[{"name":"D-galactose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-galactose-6-phosphate ketol-isomerase activity","type":"related"}],"termid":"GO:0050044"}


id: PR:P87137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 14 B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.06","secondary_identifiers":["UniProtKB:P87137"],"synonyms":[{"name":"Spom972h-Utp14b","type":"exact"}],"termid":"PR:P87137"}


id: GO:0075109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts a receptor-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","synonyms":[{"name":"perturbation of host receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075109"}


id: PBO:0027062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0027062"}


id: PBO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 1","termid":"PBO:0000072"}


id: GO:0031320
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hexitol + acceptor = hexose + reduced acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hexitol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031320","terms_by_termid":{"GO:0046526":null}}


id: GO:1900216
data:
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process","type":"related"}],"termid":"GO:0022414","terms_by_termid":{"GO:0000212":null,"GO:0000706":null,"GO:0000707":null,"GO:0000708":null,"GO:0000709":null,"GO:0000710":null,"GO:0000712":null,"GO:0000755":null,"GO:0006279":null,"GO:0006311":null,"GO:0007127":null,"GO:0007129":null,"GO:0007131":null,"GO:0007135":null,"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0010032":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0030437":null,"GO:0030476":null,"GO:0030989":null,"GO:0030999":null,"GO:0031321":null,"GO:0031322":null,"GO:0031382":null,"GO:0031619":null,"GO:0032118":null,"GO:0032120":null,"GO:0032121":null,"GO:0032220":null,"GO:0033315":null,"GO:0033316":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0040020":null,"GO:0042138":null,"GO:0044778":null,"GO:0044821":null,"GO:0045128":null,"GO:0045132":null,"GO:0045141":null,"GO:0045143":null,"GO:0045144":null,"GO:0045836":null,"GO:0051232":null,"GO:0051257":null,"GO:0051307":null,"GO:0051316":null,"GO:0051321":null,"GO:0051445":null,"GO:0051446":null,"GO:0051447":null,"GO:0051455":null,"GO:0051456":null,"GO:0051598":null,"GO:0051728":null,"GO:0051755":null,"GO:0060629":null,"GO:0061982":null,"GO:0062123":null,"GO:0062209":null,"GO:0070197":null,"GO:0070583":null,"GO:0070591":null,"GO:0071171":null,"GO:0071515":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:0090006":null,"GO:0090029":null,"GO:0090306":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0140013":null,"GO:0140434":null,"GO:0140456":null,"GO:0140642":null,"GO:0140648":null,"GO:0140748":null,"GO:1901993":null,"GO:1902103":null,"GO:1902346":null,"GO:1902441":null,"GO:1902917":null,"GO:1903024":null,"GO:1903563":null,"GO:1904514":null,"GO:1904600":null,"GO:1904967":null,"GO:1905191":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990571":null,"GO:1990813":null,"GO:1990918":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null}}


id: PATO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer whose structure deteriorates or is lost over time due to an active pathological process.","definition_xrefs":["PATOC:PortlandMeetingFeb2015","PATOC:mb"],"direct_ancestors":[{"relation_name":"has_part","term_name":"hypotrophic","termid":"PATO:0000585"},{"relation_name":"is_a","term_name":"degeneration","termid":"PATO:0002037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerate","synonyms":[{"name":"degeneration","type":"narrow"}],"termid":"PATO:0000639"}


id: GO:0000149
data:
  {"annotated_genes":["SJAG_02349","SJAG_03536","SJAG_03403","SJAG_00072","SJAG_03499","SJAG_01309","SJAG_04909","SJAG_05345","SJAG_01748","SJAG_04023","SJAG_02241","SJAG_01697","SJAG_00826","SJAG_02811","SJAG_05344","SJAG_04978","SJAG_03963"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71041,71457,72929,73806,74195,74721,74996,75182,76379,76951],"is_not":false,"summary":null,"term":"GO:0000149"},{"annotations":[75150,74328,77955,69658,69732,75326,76747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019905"}]},"cv_name":"molecular_function","definition":"Binding to a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein.","definition_xrefs":["PMID:12642621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00826":null,"SJAG_01309":null,"SJAG_01697":null,"SJAG_01748":null,"SJAG_02241":null,"SJAG_02349":null,"SJAG_02811":null,"SJAG_03403":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04909":null,"SJAG_04978":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SNARE binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380901","Reactome:R-HSA-376369","Reactome:R-HSA-380574","Reactome:R-HSA-376357","Reactome:R-HSA-9023173","Reactome:R-HSA-210426","Reactome:R-HSA-372529","Reactome:R-HSA-380869","Reactome:R-HSA-210430","Reactome:R-HSA-888589","Reactome:R-HSA-374922","Reactome:R-HSA-380905","Reactome:R-HSA-376364","Reactome:R-HSA-265166","Reactome:R-HSA-917744","Reactome:R-HSA-372505","Reactome:R-HSA-374899"],"synonyms":[{"name":"SNAP receptor binding","type":"exact"}],"termid":"GO:0000149","terms_by_termid":{"GO:0000149":null,"GO:0019905":null}}


id: GO:0008545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of tyrosine and threonine residues in a c-Jun NH2-terminal kinase (JNK), a member of a subgroup of mitogen-activated protein kinases (MAPKs), which signal in response to cytokines and exposure to environmental stress. JUN kinase kinase (JNKK) is a dual-specificity protein kinase kinase and requires activation by a serine/threonine kinase JUN kinase kinase kinase.","definition_xrefs":["PMID:11790549","GOC:bf","PMID:11057897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase activity","termid":"GO:0004708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0016301","GO:0004672","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"JUN kinase kinase activity","secondary_identifiers":["Reactome:R-HSA-168162"],"synonyms":[{"name":"JNKK","type":"exact"}],"termid":"GO:0008545"}


id: PBO:0005217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS ion channel protein 1 (predicted)","termid":"PBO:0005217"}


id: PBO:0057456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 575","termid":"PBO:0057456"}


id: MOD:01300
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-histidine residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["Unimod:335#H","PubMed:11910026","PubMed:12148805","PubMed:15133838"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"histidine 4-hydroxynonenal adduct","termid":"MOD:01239"},{"relation_name":"is_a","term_name":"reduced 4-hydroxynonenal adduct","termid":"MOD:00642"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced histidine 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:01300"}


id: GO:0034699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a luteinizing hormone stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gonadotropin","termid":"GO:0034698"},{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to luteinizing hormone","synonyms":[{"name":"response to luteinizing hormone stimulus","type":"exact"}],"termid":"GO:0034699"}


id: PBO:0066296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member X, pseudogene","termid":"PBO:0066296"}


id: PBO:0077735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS2 antisense RNA 1","termid":"PBO:0077735"}


id: GO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plant organ formation at a consistent predetermined time point during development.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of plant organ formation","termid":"GO:0090709"}


id: FYPO:0006211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates but dies before forming a germ tube or dividing. Such spores exit dormancy and undergo isotropic swelling but the spore wall does not rupture and no germ tube emerges.","definition_xrefs":["PomBase:mah","PMID:28572514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, before germ tube formation","synonyms":[{"name":"inviable following spore germination, before germ tube formation","type":"exact"},{"name":"inviable germinated spore, without germ tube formation","type":"exact"},{"name":"lethal after spore germination, before germ tube formation","type":"exact"}],"termid":"FYPO:0006211"}


id: PBO:0059536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site H","termid":"PBO:0059536"}


id: PBO:0042533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5R2 antisense RNA 1","termid":"PBO:0042533"}


id: PBO:0084841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels; protein abundance increases in response to DNA replication stress","termid":"PBO:0084841"}


id: PBO:0048276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 12","termid":"PBO:0048276"}


id: GO:0050329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetrahydroxypteridine = H+ + xanthine-8-carboxylate.","definition_xrefs":["RHEA:18097","EC:5.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"tetrahydroxypteridine cycloisomerase activity","secondary_identifiers":["MetaCyc:TETRAHYDROXYPTERIDINE-CYCLOISOMERASE-RXN","KEGG_REACTION:R04154"],"synonyms":[{"name":"tetrahydroxypteridine lyase (isomerizing)","type":"related"}],"termid":"GO:0050329"}


id: PBO:0029343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_tRNA_3'-end_processing","termid":"PBO:0029343"}


id: GO:2001140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"positively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phospholipid transport","termid":"GO:2001140"}


id: MOD:01911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one chlorine atom.","definition_xrefs":["Unimod:936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated residue","synonyms":[{"name":"Cl1Res","type":"exact"}],"termid":"MOD:01911"}


id: GO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to electroception in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"electroception","termid":"GO:0050956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in electroception","synonyms":[{"name":"detection of electrical stimulus during electroreception","type":"related"},{"name":"electroception, detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory transduction","type":"exact"},{"name":"electroception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during electroception","type":"related"},{"name":"sensory transduction of electrical stimulus during electroception","type":"related"}],"termid":"GO:0050964"}


id: PBO:0029313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029313"}


id: PBO:0059537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site L","termid":"PBO:0059537"}


id: MOD:01169
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-oxoalanine.","definition_xrefs":["DeltaMass:349","PubMed:14563551","PubMed:7628016","PubMed:9478923","PubMed:8681943","RESID:AA0185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Cys)","type":"exact"},{"name":"MOD_RES 3-oxoalanine (Ser)","type":"exact"}],"termid":"MOD:01169"}


id: PBO:0027143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_resistant_to_ionizing_radiation","termid":"PBO:0027143"}


id: FYPO:0005461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule-based movement is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule-based movement during vegetative growth","synonyms":[{"name":"abnormal microtubule-based movement during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005461"}


id: FYPO:0004696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more fatty acids (usually supplied as the corresponding anions). Cells stop growing (and may die) at a concentration of fatty acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:12963726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to fatty acid","synonyms":[{"name":"hypersensitive to fatty acid","type":"exact"},{"name":"sensitive to fatty acid anion","type":"exact"},{"name":"sensitive to fatty acid during mitotic cell cycle","type":"related"},{"name":"sensitive to fatty acid during vegetative growth","type":"exact"},{"name":"sensitive to free fatty acids","type":"exact"}],"termid":"FYPO:0004696"}


id: PBO:0012277
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombe methyltransferase","termid":"PBO:0012277"}


id: GO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCMP, deoxycytidine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCMP metabolic process","termid":"GO:0046063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCMP biosynthetic process","synonyms":[{"name":"dCMP anabolism","type":"exact"},{"name":"dCMP biosynthesis","type":"exact"},{"name":"dCMP formation","type":"exact"},{"name":"dCMP synthesis","type":"exact"}],"termid":"GO:0046064"}


id: PR:Q10146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex exonuclease rrp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.01","synonyms":[{"name":"Spom972h-rrp6","type":"exact"},{"name":"ribosomal RNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10146"}


id: PBO:0069053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 299, pseudogene","termid":"PBO:0069053"}


id: GO:0150013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process in which the anatomical structures of a neuron projection are generated and organized into branches.","definition_xrefs":["PMID:17114044","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection arborization","termid":"GO:0150011"},{"relation_name":"negatively_regulates","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection arborization","synonyms":[{"name":"negative regulation of neurite arborization","type":"exact"},{"name":"negative regulation of neurite branching","type":"exact"},{"name":"negative regulation of neuron projection branching","type":"exact"}],"termid":"GO:0150013"}


id: PBO:0084033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi PI4K effector, PtdIns4P sensor, and retention receptor; interacts with glycosyltransferases, and in the PtdIns4P-bound state mediates retention of these enzymes in the Golgi; PtdIns4P sensor that limits PI4K signaling and regulates lipid homeostasis, interacting with the catalytic domain of Sac1p, the major PtdIns4P phosphatase, directing dephosphosphorylation of the Golgi pool of PtdIns4P; tetramerization required for function; contributes to telomere function; ortholog of human GOLPH3","termid":"PBO:0084033"}


id: PBO:0049156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 2A","termid":"PBO:0049156"}


id: PBO:0065270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 32","termid":"PBO:0065270"}


id: PBO:0068836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 74, pseudogene","termid":"PBO:0068836"}


id: GO:1902594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A nuclear import which involves another organism.","definition_xrefs":["GOC:TermGenie","GO_REF:0000089","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism nuclear import (obsolete GO:1902594)","synonyms":[{"name":"multi organism nuclear import","type":"exact"}],"termid":"GO:1902594"}


id: PBO:0086374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role; AAD3 has a paralog, AAD15, that arose from a segmental duplication; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086374"}


id: PR:O74368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmm1 gene.","definition_xrefs":["UniProtKB:O74368","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of mitochondrial morphology protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.01c","synonyms":[{"name":"Spom972h-mmm1","type":"exact"}],"termid":"PR:O74368"}


id: PBO:0029738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_II_activity","termid":"PBO:0029738"}


id: PBO:0002944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR58 (predicted)","termid":"PBO:0002944"}


id: PBO:0066788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 87","termid":"PBO:0066788"}


id: MOD:01196
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant, replaced with MOD:01654. Remap to MOD:01654.","definition_xrefs":["Unimod:139"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01196 5-dimethylaminonaphthalene-1-sulfonyl - site K (obsolete MOD:01196)","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"}],"termid":"MOD:01196"}


id: GO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acyl-D-amino acid = D-amino acid + an acid.","definition_xrefs":["MetaCyc:3.5.1.81-RXN","EC:3.5.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-acyl-D-amino-acid deacylase activity","secondary_identifiers":["RHEA:18309"],"synonyms":[{"name":"D-aminoacylase activity","type":"related"},{"name":"N-acyl-D-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0047420"}


id: PBO:0065738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein 2","termid":"PBO:0065738"}


id: FYPO:0006330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers occurs to a lower extent than normal.","definition_xrefs":["GO:0061817","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased endoplasmic reticulum-plasma membrane tethering","synonyms":[{"name":"abnormal ER-PM contact formation","type":"related"},{"name":"decreased ER-PM tethering","type":"exact"},{"name":"decreased ER-plasma membrane tethering","type":"exact"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during mitotic cell cycle","type":"related"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during vegetative growth","type":"exact"},{"name":"increased ER-PM contact removal","type":"related"},{"name":"increased ER-PM uncoupling","type":"related"},{"name":"reduced endoplasmic reticulum-plasma membrane tethering","type":"exact"}],"termid":"FYPO:0006330"}


id: FYPO:0003812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal near the promoter regions of genes that are expressed in response to stress. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at protein-coding gene","termid":"FYPO:0007833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome positioning at stress response genes","synonyms":[{"name":"abnormal nucleosome occupancy at stress response genes","type":"related"},{"name":"abnormal nucleosome positioning at stress response genes during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning at stress response genes during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing at stress response genes","type":"exact"}],"termid":"FYPO:0003812"}


id: PBO:0088775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex (poly(A)-specific ribonuclease) ubiquitin C-terminal hydrolase subunit Pan2","termid":"PBO:0088775"}


id: GO:0034471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of a non-coding RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 5'-end processing","termid":"GO:0000966"},{"relation_name":"is_a","term_name":"ncRNA processing","termid":"GO:0034470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"ncRNA 5'-end processing","synonyms":[{"name":"ncRNA 5' end processing","type":"exact"}],"termid":"GO:0034471"}


id: GO:0075002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a germination tube of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont germination tube to host","synonyms":[{"name":"adhesion of symbiont germination tube to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075002"}


id: GO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A factor is necessary for cleavage but not for poly(A) addition in mRNA 3' end processing; can stimulate poly(A) addition on substrates with a CstF binding site upstream of the AAUAAA hexanucleotide.","definition_xrefs":["PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage stimulation factor activity (obsolete GO:0030365)","synonyms":[{"name":"CstF","type":"exact"},{"name":"cleavage stimulation factor activity","type":"exact"}],"termid":"GO:0030365"}


id: PBO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human retinoblastoma binding protein 2-like family","termid":"PBO:0000776"}


id: GO:0048816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ocellus are generated and organized. The ocellus is a simple visual organ of insects.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"eye-antennal disc morphogenesis","termid":"GO:0007455"},{"relation_name":"part_of","term_name":"ocellus development","termid":"GO:0008056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus morphogenesis","termid":"GO:0048816"}


id: PBO:0085278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix protein; well-conserved in fungi; contains tripartite homology domain of thiamine pyrophosphate (TPP) enzymes; targeted to peroxisomes by Pex5p; contains low sequence identity with Pdc1p; mRNA identified as translated by ribosome profiling data","termid":"PBO:0085278"}


id: PBO:0087099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal lysine methyltransferase; specific for monomethylation of Rpl42ap and Rpl42bp (lysine 55); nuclear SET-domain containing protein","termid":"PBO:0087099"}


id: PBO:0058053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4274","termid":"PBO:0058053"}


id: PBO:0086273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a likely role in ribosomal maturation; required for accumulation of wild-type levels of large (60S) ribosomal subunits; binds to the helicase Dbp6p in pre-60S ribosomal particles in the nucleolus","termid":"PBO:0086273"}


id: PBO:0040602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 6","termid":"PBO:0040602"}


id: FYPO:0003074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to pericentric heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromere during vegetative growth","termid":"FYPO:0000634"},{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromeric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localisation to pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to centric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear centromeric heterochromatin","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic cell cycle during mitotic cell cycle during mitotic cell cycle","type":"related"},{"name":"protein localization to centromeric heterochromatin abolished during vegetative growth","type":"exact"},{"name":"protein localization to pericentric heterochromatin abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003074"}


id: FYPO:0005569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the establishment or maintenance of cell polarity is abnormal when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0005568","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell polarity during G0 to G1 transition","synonyms":[{"name":"abnormal cell polarity during cell cycle re-entry","type":"exact"},{"name":"abnormal cell polarity during cell quiescence to G1 transition","type":"exact"},{"name":"abnormal cell polarity during exit from cell quiescence","type":"exact"},{"name":"abnormal cell polarity during quiescence to G1 transition","type":"exact"},{"name":"abnormal cell polarity during recovery from quiescence","type":"exact"},{"name":"abnormal cell polarity process during G0 to G1 transition","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity during G0 to G1 transition","type":"exact"},{"name":"cell polarity defects during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005569"}


id: PBO:0045182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B3","termid":"PBO:0045182"}


id: PBO:0076547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1 pseudogene 1","termid":"PBO:0076547"}


id: PR:O74882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase cytochrome b560 subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10978:SF0","OMA:SCHPO04199","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase cytochrome B subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.12c","secondary_identifiers":["UniProtKB:O74882"],"synonyms":[{"name":"Spom972h-SDHC","type":"exact"}],"termid":"PR:O74882"}


id: GO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA 5'-end processing","termid":"GO:0090617"}


id: FYPO:0003668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caffeine than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to caffeine","termid":"FYPO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to caffeine during cellular response to hydroxyurea","synonyms":[{"name":"resistance to caffeine during cellular response to HU","type":"exact"},{"name":"resistance to caffeine during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"resistant to caffeine during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0003668"}


id: GO:0020032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense ring at the most posterior position of the apical complex, from which the subpellicular microtubules originate; formed during an invasive life cycle stage of an apicomplexan parasite.","definition_xrefs":["GOC:mah","PMID:16518471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal ring of apical complex","synonyms":[{"name":"lower polar ring of apical complex","type":"exact"},{"name":"posterior polar ring of apical complex","type":"exact"},{"name":"preconoidal ring of apical complex","type":"exact"}],"termid":"GO:0020032"}


id: FYPO:0004068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0071620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004068"}


id: PBO:0004176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heatshock protein Hsp78 (predicted)","termid":"PBO:0004176"}


id: PBO:0072776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A like 1","termid":"PBO:0072776"}


id: _global:has_penetrance
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed penetrance in a population. Penetrance is the proportion of individuals carrying an allele that express a trait associated with the allele.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_penetrance","synonyms":[{"name":"penetrance","type":"exact"}],"termid":"_global:has_penetrance"}


id: PR:O74497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC285.10c gene.","definition_xrefs":["UniProtKB:O74497","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain-containing protein C285.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.10c","synonyms":[{"name":"Spom972h-SPCC285.10c","type":"exact"}],"termid":"PR:O74497"}


id: PBO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 14 (pseudogene)","termid":"PBO:0045603"}


id: PBO:0060832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD1 gamma-tubulin ring complex targeting factor","termid":"PBO:0060832"}


id: PBO:0054801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2214","termid":"PBO:0054801"}


id: PBO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_mutualism","termid":"PBO:0034147"}


id: PBO:0049953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible factor 3 subunit alpha","termid":"PBO:0049953"}


id: PR:000085719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P10651, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PomBase:VW","PMID:37459529","PRO:DAN"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K36)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-37, MOD:00663","type":"exact"},{"name":"Spom-hht3/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-37, MOD:00663","type":"exact"},{"name":"hht3/Me(K36)","type":"exact"}],"termid":"PR:000085719"}


id: PBO:0005385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 5","termid":"PBO:0005385"}


id: GO:0050122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + H2O + O2 = N-acetyl-D-glucosaminate + H2O2 + H+.","definition_xrefs":["EC:1.1.3.29","RHEA:13029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N-acylhexosamine oxidase activity","secondary_identifiers":["KEGG_REACTION:R01203","MetaCyc:N-ACYLHEXOSAMINE-OXIDASE-RXN"],"synonyms":[{"name":"N-acyl-D-hexosamine oxidase activity","type":"related"},{"name":"N-acyl-D-hexosamine:oxygen 1-oxidoreductase activity","type":"related"},{"name":"N-acyl-beta-D-hexosamine:oxygen 1-oxidoreductase activity","type":"related"}],"termid":"GO:0050122"}


id: PBO:0031513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_molecular_function","termid":"PBO:0031513"}


id: PBO:0003657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK family kinase","termid":"PBO:0003657"}


id: GO:0018222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-L-cysteine methyl disulfide.","definition_xrefs":["RESID:AA0101"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine methyl disulfide biosynthetic process from peptidyl-cysteine (obsolete GO:0018222)","synonyms":[{"name":"peptidyl-L-cysteine methyl disulfide anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl disulfide formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl disulfide synthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl disulphide biosynthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl disulphide biosynthetic process from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018222"}


id: PBO:0088692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha family nuclear import signal receptor adaptor Imp1","termid":"PBO:0088692"}


id: PBO:0050054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, U (pseudogene)","termid":"PBO:0050054"}


id: GO:0006314
data:
  {"annotated_genes":["SJAG_MIT06","SJAG_MIT07","SJAG_MIT05"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115123,115124,115131,115132],"is_not":false,"summary":null,"term":"GO:0006314"}]},"cv_name":"biological_process","definition":"Lateral transfer of an intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron.","definition_xrefs":["PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"intron homing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006314","terms_by_termid":{"GO:0006314":null}}


id: PBO:0088405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase","termid":"PBO:0088405"}


id: GO:0052112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism reduces the flow of fluid within the host xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28871268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated occlusion of host xylem","synonyms":[{"name":"occlusion by symbiont of host xylem","type":"exact"}],"termid":"GO:0052112"}


id: FYPO:0001187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population reaches stationary phase at, and maintains, a lower cell density than wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell density in stationary phase","synonyms":[{"name":"reduced cell density in stationary phase","type":"exact"}],"termid":"FYPO:0001187"}


id: PBO:0051714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSIG1 divergent transcript","termid":"PBO:0051714"}


id: PBO:0069921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1213, pseudogene","termid":"PBO:0069921"}


id: GO:0040033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway mediated by the action of small regulatory non-coding RNAs (sRNAs). sRNAs are 20-500 nucleotides in length and found in bacteria.","definition_xrefs":["PMID:12460531","PMID:2468565","PMID:33963446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"sRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"RNA-mediated gene silencing by inhibition of translation","type":"broad"},{"name":"downregulation of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"inhibition of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"sRNA-mediated gene silencing","type":"broad"},{"name":"small RNA-mediated gene silencing","type":"exact"}],"termid":"GO:0040033"}


id: PBO:0074676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 60","termid":"PBO:0074676"}


id: PBO:0060952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor I X","termid":"PBO:0060952"}


id: GO:0071847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of tumor necrosis factor ligand superfamily member 11 (TNFSF11) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF","PMID:18606301"],"gene_count":0,"genotype_count":0,"name":"obsolete TNFSF11-mediated signaling pathway (obsolete GO:0071847)","synonyms":[{"name":"RANKL-mediated signaling pathway","type":"exact"},{"name":"TNF-related activation-induced cytokine-mediated signaling pathway","type":"exact"},{"name":"TNFSF11-mediated signalling pathway","type":"exact"},{"name":"receptor activator of nuclear factor kappa-B ligand signaling pathway","type":"exact"},{"name":"tumor necrosis factor superfamily member 11-mediated signaling pathway","type":"exact"}],"termid":"GO:0071847"}


id: SO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of three nucleotide bases in tRNA. It has sequence T-Psi-C.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_loop","synonyms":[{"name":"T loop","type":"exact"},{"name":"TpsiC loop","type":"exact"}],"termid":"SO:0001177"}


id: PBO:0000844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of condensation (RCC1) domains","termid":"PBO:0000844"}


id: GO:0050582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xylitol + O2 = xylose + H2O2.","definition_xrefs":["MetaCyc:1.1.3.41-RXN","EC:1.1.3.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xylitol oxidase activity","synonyms":[{"name":"xylitol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050582"}


id: PBO:0036026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_proline","termid":"PBO:0036026"}


id: GO:0016918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"retinal binding","synonyms":[{"name":"UV-sensitive opsin","type":"related"},{"name":"blue-sensitive opsin","type":"related"},{"name":"green-sensitive opsin","type":"related"},{"name":"long-wave-sensitive opsin","type":"related"},{"name":"opsin","type":"related"},{"name":"red-sensitive opsin","type":"related"},{"name":"retinaldehyde binding","type":"exact"},{"name":"short-wave-sensitive opsin","type":"related"},{"name":"violet-sensitive opsin","type":"related"},{"name":"vitamin A binding","type":"broad"}],"termid":"GO:0016918"}


id: PBO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1/PHO80 domain containing 1","termid":"PBO:0043477"}


id: GO:0033376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"part_of","term_name":"protein localization to T cell secretory granule","termid":"GO:0033374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to T cell secretory granule","synonyms":[{"name":"establishment of protein localisation in T cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of protein localization in T-cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033376"}


id: GO:0009808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:lr","GOC:yl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignin metabolic process","synonyms":[{"name":"lignin metabolism","type":"exact"}],"termid":"GO:0009808"}


id: PBO:0041680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dependent secretion activator","termid":"PBO:0041680"}


id: PBO:0083860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl cysteine-carboxyl methyltransferase; mediates the carboxyl methylation step during C-terminal CAAX motif processing of a-factor and RAS proteins in the endoplasmic reticulum, localizes to the ER membrane","termid":"PBO:0083860"}


id: PBO:0086728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YPL216W has a paralog, ITC1, that arose from the whole genome duplication","termid":"PBO:0086728"}


id: GO:0043659
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A double-enveloped cell compartment, composed of an endosymbiont with its plasmalemma (as inner envelope) and a non-endosymbiotic outer envelope (the perisymbiontic membrane).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"symbiosome","termid":"GO:0043659"}


id: PBO:0109518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPDYE1 and UBE2D4 antisense RNA 1","termid":"PBO:0109518"}


id: PBO:0080230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VKORC1 pseudogene 1","termid":"PBO:0080230"}


id: PBO:0045077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 4","termid":"PBO:0045077"}


id: PBO:0028599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_elongation_from_RNA_polymerase_III_promoter_during_vegetative_growth","termid":"PBO:0028599"}


id: GO:0071972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a peptidoglycan dimer (tetrapeptide) + 3 H2O = a peptidoglycan tetramer with L,D cross-links (L-Lys-D-Asn-L-Lys) + di-trans,poly-cis-undecaprenyl diphosphate + 4 D-alanine.","definition_xrefs":["MetaCyc:RXN-11349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type carboxypeptidase activity","termid":"GO:0004185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0003824","GO:0008233"],"is_obsolete":false,"name":"peptidoglycan L,D-transpeptidase activity","termid":"GO:0071972"}


id: MOD:01722
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01722"}


id: PBO:0057753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1912","termid":"PBO:0057753"}


id: GO:1990507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone, and independent of ATP hydrolysis.","definition_xrefs":["PMID:25242142","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-independent chaperone mediated protein folding (obsolete GO:1990507)","termid":"GO:1990507"}


id: GO:0102410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin 4'-O-glucoside + UDP-alpha-D-glucose(2-) = quercetin 3,4'-O-diglucoside + UDP(3-).","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin-4',3-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13765"],"termid":"GO:0102410"}


id: PR:Q8J1M8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8J1M8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein C1952.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.04c","synonyms":[{"name":"Spom972h-SPAC1952.04c","type":"exact"}],"termid":"PR:Q8J1M8"}


id: GO:2000610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"is_a","term_name":"regulation of thyroid hormone generation","termid":"GO:2000609"},{"relation_name":"negatively_regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid hormone generation","termid":"GO:2000610"}


id: FYPO:0003170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal arginine import","termid":"FYPO:0001654"},{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased arginine import","synonyms":[{"name":"increased L-arginine import","type":"exact"},{"name":"increased L-arginine import across plasma membrane","type":"exact"},{"name":"increased L-arginine uptake","type":"exact"},{"name":"increased arginine import during mitotic cell cycle","type":"related"},{"name":"increased arginine import during vegetative growth","type":"exact"},{"name":"increased arginine import into cell","type":"exact"}],"termid":"FYPO:0003170"}


id: PBO:0088498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein, peroxidase","termid":"PBO:0088498"}


id: GO:0099127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the activation of the cytosolic argininosuccinate synthase in the bitten organism.","definition_xrefs":["PMID:19491403"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of argininosuccinate synthase activity in another organism (obsolete GO:0099127)","synonyms":[{"name":"envenomation resulting in positive regulation of argininosuccinate synthase activity in other organism","type":"exact"}],"termid":"GO:0099127"}


id: SO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the three_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_coding_region","synonyms":[{"name":"three prime exon coding region","type":"exact"}],"termid":"SO:0000197"}


id: PR:O13787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec62 gene.","definition_xrefs":["UniProtKB:O13787","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.09","synonyms":[{"name":"Spom972h-sec62","type":"exact"}],"termid":"PR:O13787"}


id: PBO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 21","termid":"PBO:0072302"}


id: FYPO:0000590
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115315,115318],"is_not":false,"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal sporulation","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["rip1delta","cox6delta"],"synonyms":[{"name":"normal ascospore formation","type":"exact"},{"name":"sporulation: normal","type":"related"}],"termid":"FYPO:0000590","terms_by_termid":{"FYPO:0000590":null}}


id: PBO:0069086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 333, pseudogene","termid":"PBO:0069086"}


id: PBO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 like","termid":"PBO:0070443"}


id: FYPO:0002765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased tRNA methyltransferase activity","termid":"FYPO:0001772"},{"relation_name":"is_a","term_name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased tRNA (guanine(9)-N(1))-methyltransferase activity","synonyms":[{"name":"reduced tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"}],"termid":"FYPO:0002765"}


id: FYPO:0003019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["GO:0031952","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein autophosphorylation during vegetative growth","synonyms":[{"name":"abnormal protein autophosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003019"}


id: GO:0047508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-citramalate = 2-methylmaleate + H2O.","definition_xrefs":["EC:4.2.1.35","RHEA:22332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R)-2-methylmalate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03896","MetaCyc:R-2-METHYLMALATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"(-)-citramalate hydro-lyase activity","type":"related"},{"name":"(R)-2-methylmalate hydro-lyase (2-methylmaleate-forming)","type":"related"},{"name":"(R)-2-methylmalate hydro-lyase activity","type":"related"},{"name":"citraconase activity","type":"related"},{"name":"citraconate hydratase activity","type":"related"},{"name":"citramalate hydro-lyase activity","type":"related"}],"termid":"GO:0047508"}


id: PBO:0027855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027855"}


id: PBO:0076706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 7","termid":"PBO:0076706"}


id: PBO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 10","termid":"PBO:0048509"}


id: GO:0033349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving apiose, the branched tetrose 3-C-(hydroxymethyl)-D-glycero-tetrose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrose metabolic process","termid":"GO:0033347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"apiose metabolic process","synonyms":[{"name":"apiose metabolism","type":"exact"}],"termid":"GO:0033349"}


id: PBO:0048942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi reassembly stacking protein 2","termid":"PBO:0048942"}


id: PBO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S18 (predicted)","termid":"PBO:0002779"}


id: PBO:0028988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_small_RNA_level_(obsolete_FYPO:0003262)","termid":"PBO:0028988"}


id: GO:1901798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signal transduction by p53 class mediator","synonyms":[{"name":"activation of signal transduction by p53 class mediator","type":"narrow"},{"name":"up regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"up-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"upregulation of signal transduction by p53 class mediator","type":"exact"}],"termid":"GO:1901798"}


id: FYPO:0005072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is normal (i.e. indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"},{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to centromeric chromatin","synonyms":[{"name":"normal protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere","type":"exact"}],"termid":"FYPO:0005072"}


id: GO:0015400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ammonium from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonium transmembrane transporter activity","termid":"GO:0008519"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low-affinity secondary active ammonium transmembrane transporter activity","synonyms":[{"name":"low affinity ammonium transmembrane transporter activity","type":"related"},{"name":"low affinity secondary active ammonium transmembrane transporter activity","type":"exact"}],"termid":"GO:0015400"}


id: PBO:0061613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear distribution C pseudogene 1","termid":"PBO:0061613"}


id: PBO:0041655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 1","termid":"PBO:0041655"}


id: PBO:0069867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1154, pseudogene","termid":"PBO:0069867"}


id: PBO:0026743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_negative_regulation_of_protein_kinase_activity","termid":"PBO:0026743"}


id: PBO:0085936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0085936"}


id: GO:1990563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is wholly or partially contained within the lumen or membrane of the extracellular vesicular exosome.","definition_xrefs":["GOC:bhm","PMID:22660413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular exosome","termid":"GO:0070062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"extracellular exosome complex","synonyms":[{"name":"exosome complex","type":"exact"},{"name":"extracellular vesicular exosome complex","type":"exact"}],"termid":"GO:1990563"}


id: PBO:0072889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 1","termid":"PBO:0072889"}


id: PBO:0045029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3L antisense RNA 1","termid":"PBO:0045029"}


id: GO:0019664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into ethanol, lactate, formate, succinate, and acetate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:FERMENTATION-PWY","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"succinate metabolic process","termid":"GO:0006105"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"mixed acid fermentation","secondary_identifiers":["Wikipedia:Mixed_acid_fermentation"],"synonyms":[{"name":"glucose catabolic process to mixed acids","type":"broad"},{"name":"glucose fermentation to mixed acids","type":"exact"}],"termid":"GO:0019664"}


id: PBO:0091038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase Ecm31","termid":"PBO:0091038"}


id: PBO:0073105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sidekick cell adhesion molecule 1","termid":"PBO:0073105"}


id: PBO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B","termid":"PBO:0043032"}


id: PBO:0089785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notchless-like ribosome biogenesis protein Rsa4","termid":"PBO:0089785"}


id: PBO:0091161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, CCHC-type","termid":"PBO:0091161"}


id: GO:0042625
data:
  {"annotated_genes":["SJAG_01817","SJAG_04015","SJAG_04955","SJAG_00212","SJAG_01471","SJAG_03406","SJAG_01397","SJAG_05294","SJAG_00136","SJAG_02023","SJAG_01447","SJAG_00516","SJAG_02782","SJAG_01913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87603,85357,91337,92316,83507,97429,99753,98473,94666,85684,95688,105812,114818,95766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an ion from one side of a membrane to the other, driven by the reaction: ATP + H2O = ADP + phosphate.","definition_xrefs":["GOC:mtg_transport","GOC:jl","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent ion transmembrane transporter activity","type":"exact"},{"name":"ATPase activity, coupled to transmembrane movement of ions","type":"exact"},{"name":"ATPase coupled ion transmembrane transporter activity","type":"exact"}],"termid":"GO:0042625","terms_by_termid":{"GO:0046961":null}}


id: PBO:0050135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 45","termid":"PBO:0050135"}


id: GO:0071525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["PMID:17204561","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrrolysine metabolic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct metabolic process","type":"exact"},{"name":"pyrrolysine metabolism","type":"exact"}],"termid":"GO:0071525"}


id: PBO:0047054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 114 member A2","termid":"PBO:0047054"}


id: PBO:0090001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3/SUMO transferase, Topors, possibly associated with DNA damage","termid":"PBO:0090001"}


id: PBO:0061193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronatin","termid":"PBO:0061193"}


id: PBO:0039590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7 like 1 (pseudogene)","termid":"PBO:0039590"}


id: GO:0006821
data:
  {"annotated_genes":["SJAG_01168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"}]},"cv_name":"biological_process","definition":"The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01168":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chloride transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006821","terms_by_termid":{"GO:1902476":null}}


id: PBO:0070423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 1","termid":"PBO:0070423"}


id: GO:0010910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis by an increase in epimerase activity. This epimerase activity catalyzes the reaction that converts D-glucuronate into its diastereoisomer in heparan sulfate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heparan sulfate proteoglycan biosynthetic process","termid":"GO:0010909"},{"relation_name":"is_a","term_name":"positive regulation of isomerase activity","termid":"GO:0010912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of heparan sulfate proteoglycan biosynthesis by positive regulation of epimerase activity","termid":"GO:0010910"}


id: GO:0034515
data:
  {"annotated_genes":["SJAG_04088","SJAG_03638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101186,109062],"is_not":false,"summary":null,"term":"GO:0034515"}]},"cv_name":"cellular_component","definition":"An aggregation of proteasome core protease (CP) and regulatory particle (RP) complexes that localizes in the cytoplasm as dot-like structures when cells are in a quiescent state.","definition_xrefs":["PMID:30204036","GOC:krc","GOC:rb","PMID:18504300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03638":null,"SJAG_04088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proteasome storage granule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PSG","type":"related"}],"termid":"GO:0034515","terms_by_termid":{"GO:0034515":null}}


id: PBO:0063109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 2","termid":"PBO:0063109"}


id: PBO:0038515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 1","termid":"PBO:0038515"}


id: GO:0050888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of where on the body surface, within the body or in the environment a stimulus originates.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of stimulus location","termid":"GO:0050888"}


id: GO:0021556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the central nervous system. This process pertains to the initial formation of a structure from unspecified parts. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"central nervous system morphogenesis","termid":"GO:0021551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system formation","termid":"GO:0021556"}


id: PBO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, human PPP1R16A ortholog","termid":"PBO:0017610"}


id: PR:O14021
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prw1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RbAp48-related WD40 repeat-containing protein prw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.18","synonyms":[{"name":"Spom972h-prw1","type":"exact"}],"termid":"PR:O14021"}


id: GO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo sac over time, from its formation as the megaspore to the mature structure. The process begins when three of the four haploid megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center.","definition_xrefs":["GOC:mtg_plant","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"embryo sac development","termid":"GO:0009553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megagametogenesis","secondary_identifiers":["Wikipedia:Megagametogenesis"],"synonyms":[{"name":"embryo sac development from the megaspore","type":"exact"},{"name":"megagametophyte nucleus division","type":"exact"}],"termid":"GO:0009561"}


id: FYPO:0004579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from transposable element transcripts measured in a cell normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal transposable element-derived small RNA level","synonyms":[{"name":"normal transposable element-derived small RNA accumulation","type":"related"},{"name":"normal transposable element-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"normal transposable element-derived small RNA level during vegetative growth","type":"exact"},{"name":"normal transposable element-derived small RNA transcript level","type":"exact"}],"termid":"FYPO:0004579"}


id: PBO:0078771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-3","termid":"PBO:0078771"}


id: GO:0090555
data:
  {"annotated_genes":["SJAG_05209","SJAG_02897","SJAG_00669","SJAG_01945","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90069,93654,95217,95946,108492],"is_not":false,"summary":null,"term":"GO:0090555"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:16452632","GOC:ab","RHEA:36440","PMID:20043909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:66132"],"synonyms":[{"name":"ATP-dependent phosphatidylethanolamine transporter activity","type":"related"},{"name":"ATPase-coupled phosphatidylethanolamine transporter activity","type":"broad"},{"name":"phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"},{"name":"phosphatidylethanolamine-translocating ATPase activity","type":"related"}],"termid":"GO:0090555","terms_by_termid":{"GO:0090555":null}}


id: PBO:0079237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 9C","termid":"PBO:0079237"}


id: PBO:0038710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 4","termid":"PBO:0038710"}


id: GO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host protein.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host molecular function (obsolete GO:0039507)","synonyms":[{"name":"down regulation by virus of host protein function","type":"exact"},{"name":"down-regulation by virus of host protein function","type":"exact"},{"name":"inhibition by virus of host protein function","type":"narrow"},{"name":"inhibition of host protein function","type":"narrow"},{"name":"negative regulation by virus of host molecular function","type":"exact"},{"name":"negative regulation by virus of host protein function","type":"exact"}],"termid":"GO:0039507"}


id: GO:0034143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"regulation of TLR4 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034143"}


id: PBO:0039556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 3","termid":"PBO:0039556"}


id: PR:Q10164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.09c","synonyms":[{"name":"Spom972h-rga2","type":"exact"}],"termid":"PR:Q10164"}


id: GO:0035460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ascorbate 6-phosphate + H2O = 3-keto-L-gulonate 6-phosphate.","definition_xrefs":["PMID:20359483","PMID:18097099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"L-ascorbate 6-phosphate lactonase activity","secondary_identifiers":["RHEA:28803"],"termid":"GO:0035460"}


id: PBO:0039394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 3","termid":"PBO:0039394"}


id: PBO:0050295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A0","termid":"PBO:0050295"}


id: PBO:0082899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-like component of RNA polymerase II holoenzyme; involved in phosphorylation of RNAPII C-terminal domain; forms kinase-cyclin pair in RNAPII holoenzyme with Ssn3p; needed for entry into and execution of meiotic program; involved in glucose repression, telomere maintenance; degraded in response to nitrogen starvation, and also to oxidative stress, but in different cellular compartments, and with different cellular outcomes; 35% identical to human cyclin C","termid":"PBO:0082899"}


id: PBO:0072570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase catalytic subunit M1","termid":"PBO:0072570"}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: PBO:0065800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A, member RAS oncogene family","termid":"PBO:0065800"}


id: GO:0016529
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.","definition_xrefs":["GOC:mtg_muscle","ISBN:0124325653","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum","termid":"GO:0005783"},{"relation_name":"part_of","term_name":"sarcoplasm","termid":"GO:0016528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sarcoplasmic reticulum","secondary_identifiers":["GO:0008221","Wikipedia:Endoplasmic_reticulum#Sarcoplasmic_reticulum"],"termid":"GO:0016529"}


id: PBO:0044971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 8","termid":"PBO:0044971"}


id: PBO:0084299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven closely related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in the reference strain (S288C)","termid":"PBO:0084299"}


id: PBO:0068671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 52, pseudogene","termid":"PBO:0068671"}


id: GO:0018031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.","definition_xrefs":["PMID:29074776","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}


id: PBO:0053549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 556","termid":"PBO:0053549"}


id: FYPO:0006753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:29632066","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased H4-K20 dimethylation during vegetative growth","termid":"FYPO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H4-K20 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H4K20me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006753"}


id: PBO:0080954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBED9 antisense RNA 1","termid":"PBO:0080954"}


id: PBO:0064563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraoxonase 1","termid":"PBO:0064563"}


id: PBO:0056496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 1","termid":"PBO:0056496"}


id: PBO:0004844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane alkaline phosphatase (predicted)","termid":"PBO:0004844"}


id: PBO:0091935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere proximal small non-coding RNA","termid":"PBO:0091935"}


id: PBO:0089826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor-like protein","termid":"PBO:0089826"}


id: GO:1904687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["PMID:25963819","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle disassembly","termid":"GO:1904686"},{"relation_name":"positively_regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic spindle disassembly","synonyms":[{"name":"activation of mitotic spindle breakdown","type":"narrow"},{"name":"activation of mitotic spindle catabolism","type":"narrow"},{"name":"activation of mitotic spindle degradation","type":"narrow"},{"name":"activation of mitotic spindle disassembly","type":"narrow"},{"name":"activation of spindle breakdown during mitosis","type":"narrow"},{"name":"activation of spindle degradation during mitosis","type":"narrow"},{"name":"activation of spindle disassembly during mitosis","type":"narrow"},{"name":"positive regulation of mitotic spindle breakdown","type":"exact"},{"name":"positive regulation of mitotic spindle catabolism","type":"exact"},{"name":"positive regulation of mitotic spindle degradation","type":"exact"},{"name":"positive regulation of spindle breakdown during mitosis","type":"exact"},{"name":"positive regulation of spindle degradation during mitosis","type":"exact"},{"name":"positive regulation of spindle disassembly during mitosis","type":"exact"},{"name":"up regulation of mitotic spindle breakdown","type":"exact"},{"name":"up regulation of mitotic spindle catabolism","type":"exact"},{"name":"up regulation of mitotic spindle degradation","type":"exact"},{"name":"up regulation of mitotic spindle disassembly","type":"exact"},{"name":"up regulation of spindle breakdown during mitosis","type":"exact"},{"name":"up regulation of spindle degradation during mitosis","type":"exact"},{"name":"up regulation of spindle disassembly during mitosis","type":"exact"},{"name":"up-regulation of mitotic spindle breakdown","type":"exact"},{"name":"up-regulation of mitotic spindle catabolism","type":"exact"},{"name":"up-regulation of mitotic spindle degradation","type":"exact"},{"name":"up-regulation of mitotic spindle disassembly","type":"exact"},{"name":"up-regulation of spindle breakdown during mitosis","type":"exact"},{"name":"up-regulation of spindle degradation during mitosis","type":"exact"},{"name":"up-regulation of spindle disassembly during mitosis","type":"exact"},{"name":"upregulation of mitotic spindle breakdown","type":"exact"},{"name":"upregulation of mitotic spindle catabolism","type":"exact"},{"name":"upregulation of mitotic spindle degradation","type":"exact"},{"name":"upregulation of mitotic spindle disassembly","type":"exact"},{"name":"upregulation of spindle breakdown during mitosis","type":"exact"},{"name":"upregulation of spindle degradation during mitosis","type":"exact"},{"name":"upregulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904687"}


id: PBO:0088054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein of the SUMO family; conjugated to lysine residues of target proteins; associates with transcriptionally active genes; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; human homolog SUMO1 can complement yeast null mutant","termid":"PBO:0088054"}


id: PATO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000561 length value (obsolete PATO:0000561)","termid":"PATO:0000561"}


id: PBO:0050304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 6","termid":"PBO:0050304"}


id: MOD:00480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["OMSSA:129","Unimod:105#C","URL:http://www.appliedbiosystems.com/products/productdetail.cfm?prod_id=153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems cleavable ICAT(TM) light","synonyms":[{"name":"Applied Biosystems cleavable ICAT(TM) light","type":"related"},{"name":"ICAT-C","type":"related"},{"name":"icatlight","type":"exact"}],"termid":"MOD:00480"}


id: PBO:0078020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 10","termid":"PBO:0078020"}


id: PBO:0054437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1833","termid":"PBO:0054437"}


id: PBO:0083509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CRN1","termid":"PBO:0083509"}


id: PBO:0069068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 315, pseudogene","termid":"PBO:0069068"}


id: PBO:0027807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5823","termid":"PBO:0027807"}


id: PBO:0075406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 4","termid":"PBO:0075406"}


id: PBO:0069360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 620, pseudogene","termid":"PBO:0069360"}


id: GO:0090291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of osteoclast proliferation","termid":"GO:0090289"},{"relation_name":"negatively_regulates","term_name":"osteoclast proliferation","termid":"GO:0002158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoclast proliferation","termid":"GO:0090291"}


id: GO:0052105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host cell wall thickening (obsolete GO:0052105)","synonyms":[{"name":"activation by organism of defense-related host cell wall thickening","type":"exact"},{"name":"activation by organism of host defensive cell wall thickening","type":"exact"},{"name":"activation by symbiont of defense-related host cell wall thickening","type":"exact"},{"name":"induction by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by organism of host defensive cell wall thickening","type":"exact"},{"name":"positive regulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of host defensive cell wall thickening","type":"related"},{"name":"positive regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"stimulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"up regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"up-regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"upregulation by symbiont of defense-related host cell wall thickening","type":"related"}],"termid":"GO:0052105"}


id: GO:0046717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of acid by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acid secretion","termid":"GO:0046717"}


id: GO:0044643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of complement activation, alternative pathway in another organism (obsolete GO:0044643)","synonyms":[{"name":"envenomation resulting in positive regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044643"}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:11299204","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: GO:0070527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"},{"relation_name":"part_of","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"platelet aggregation","synonyms":[{"name":"blood platelet aggregation","type":"exact"},{"name":"thrombocyte aggregation","type":"related"}],"termid":"GO:0070527"}


id: PBO:0044820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109C","termid":"PBO:0044820"}


id: PBO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD101 antisense RNA 1","termid":"PBO:0042359"}


id: GO:1990416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brain-derived neurotrophic factor stimulus.","definition_xrefs":["PMID:21958434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nerve growth factor stimulus","termid":"GO:1990090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brain-derived neurotrophic factor stimulus","synonyms":[{"name":"cellular response to BDNF stimulus","type":"exact"}],"termid":"GO:1990416"}


id: PBO:0031199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0031199"}


id: GO:0016187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Internalization of the contents of a synaptic vesicle into the postsynaptic membrane following endocytosis.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle internalization (obsolete GO:0016187)","synonyms":[{"name":"synaptic vesicle internalization","type":"exact"}],"termid":"GO:0016187"}


id: FYPO:0000516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear import is normal (i.e. indistinguishable from wild type). Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleocytoplasmic transport","termid":"FYPO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear import","synonyms":[{"name":"normal nuclear import during mitotic cell cycle","type":"related"},{"name":"normal nuclear import during vegetative growth","type":"exact"},{"name":"nuclear import: normal","type":"related"}],"termid":"FYPO:0000516"}


id: PBO:0044170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin alpha 1","termid":"PBO:0044170"}


id: PBO:0034583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_cortex,_with_protein_mislocalized_to_vacuole,_during_vegetative_growth","termid":"PBO:0034583"}


id: PBO:0088166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40 repeat-containing protein associated with the CCR4-NOT complex; interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission; CAF4 has a paralog, MDV1, that arose from the whole genome duplication","termid":"PBO:0088166"}


id: GO:0019072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral genome within the capsid.","definition_xrefs":["ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome packaging","termid":"GO:0019072"}


id: MOD:01962
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine.","definition_xrefs":["RESID:AA0606","PubMed:19236052","PubMed:12186869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetylamino-2,4,6-trideoxy-beta-D-glucopyranosyl)amino]-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (DATDGlc) asparagine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine","type":"exact"},{"name":"N4-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-asparagine","type":"exact"},{"name":"N4-[N,N-diacetylbacillosaminyl]asparagine","type":"exact"},{"name":"N4-[N2,N4-diacetylbacillosaminyl]asparagine","type":"exact"}],"termid":"MOD:01962"}


id: GO:0075229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of encysted zoospore germination","termid":"GO:0075227"},{"relation_name":"is_a","term_name":"negative regulation of spore germination","termid":"GO:1904360"},{"relation_name":"negatively_regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of encysted zoospore germination","synonyms":[{"name":"negative regulation of encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075229"}


id: PBO:0077940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 1-1","termid":"PBO:0077940"}


id: PBO:0017037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR93","termid":"PBO:0017037"}


id: GO:0102914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methyl-3-aminomethylindole + S-adenosyl-L-methionine = H+ + gramine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"N-methyl-3-aminomethylindole N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8687","RHEA:52272"],"termid":"GO:0102914"}


id: GO:0014031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell development","termid":"GO:0014031"}


id: GO:0052067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which in a symbiont interferes with or inhibits host phagocytosis by targeting phagocytic signaling or the cellular phagocytic machinery. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23084912","PMID:29114249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defenses","termid":"GO:0030682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host phagocytosis","secondary_identifiers":["GO:0052380","GO:0052483"],"synonyms":[{"name":"antiphagocytosis","type":"related"},{"name":"disruption of host phagocytosis","type":"exact"},{"name":"inhibition by symbiont of entry into host cell via phagocytosis","type":"narrow"},{"name":"modulation by organism of entry into host via host phagocytosis","type":"broad"},{"name":"modulation by symbiont of entry into host via phagocytosis","type":"broad"},{"name":"phagocytosis avoidence","type":"related"}],"termid":"GO:0052067"}


id: PBO:0049183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine rich extracellular protein 1","termid":"PBO:0049183"}


id: GO:0120288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of intramembrane cleaving aspartic-type endopeptidase activity.","definition_xrefs":["PMID:32616437","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic endopeptidase activity, intramembrane cleaving (obsolete GO:0120288)","termid":"GO:0120288"}


id: PBO:0017804
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 Associated protein","termid":"PBO:0017804"}


id: PBO:0004367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 1 Pre3 (predicted)","termid":"PBO:0004367"}


id: PBO:0003392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl reductase (predicted)","termid":"PBO:0003392"}


id: PBO:0056071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G5B","termid":"PBO:0056071"}


id: GO:0015083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of aluminum (Al) ions from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"aluminum ion transmembrane transporter activity","secondary_identifiers":["GO:0015084"],"synonyms":[{"name":"aluminium ion transporter activity","type":"exact"},{"name":"aluminium resistance permease activity","type":"exact"},{"name":"aluminum resistance permease activity","type":"exact"}],"termid":"GO:0015083"}


id: GO:0043289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of apocarotenoids by the oxidative cleavage of carotenoids. Many apocarotenoids are biologically important e.g. retinal and abscisic acid.","definition_xrefs":["GOC:jl","PMID:27485225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"},{"relation_name":"is_a","term_name":"apocarotenoid metabolic process","termid":"GO:0043288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"apocarotenoid biosynthetic process","synonyms":[{"name":"apo carotenoid biosynthetic process","type":"exact"},{"name":"apocarotenoid anabolism","type":"exact"},{"name":"apocarotenoid biosynthesis","type":"exact"},{"name":"apocarotenoid formation","type":"exact"},{"name":"apocarotenoid synthesis","type":"exact"}],"termid":"GO:0043289"}


id: FYECO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which alpha-tocopherol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ alpha-tocopherol","synonyms":[{"name":"vitamin E added","type":"related"}],"termid":"FYECO:0000183"}


id: GO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine or peptidyl-serine to peptidyl-L-3-oxoalanine; characteristic of the active sites of arylsulfatases.","definition_xrefs":["RESID:AA0185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3-oxoalanine biosynthetic process from peptidyl-cysteine or peptidyl-serine","synonyms":[{"name":"peptidyl-L-3-oxoalanine anabolism from peptidyl-cysteine or peptidyl-serine","type":"exact"},{"name":"peptidyl-L-3-oxoalanine formation from peptidyl-cysteine or peptidyl-serine","type":"exact"},{"name":"peptidyl-L-3-oxoalanine synthesis from peptidyl-cysteine or peptidyl-serine","type":"exact"}],"termid":"GO:0018083"}


id: GO:0047258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sphingosine + UDP-D-galactose = H+ + psychosine + UDP.","definition_xrefs":["RHEA:19485","EC:2.4.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"sphingosine beta-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01928","MetaCyc:2.4.1.23-RXN"],"synonyms":[{"name":"UDP-galactose:sphingosine 1-beta-galactotransferase activity","type":"related"},{"name":"UDPgalactose:sphingosine 1-beta-galactotransferase activity","type":"related"},{"name":"UDPgalactose:sphingosine O-galactosyl transferase activity","type":"related"},{"name":"galactosyl-sphingosine transferase activity","type":"related"},{"name":"psychosine-UDP galactosyltransferase activity","type":"related"},{"name":"psychosine-uridine diphosphate galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-sphingosine beta-galactosyltransferase activity","type":"related"}],"termid":"GO:0047258"}


id: GO:0043827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine57/adenosine58 in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N1-methyladenosine57/N1-methyladenosine58 in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:41740","PMID:14739239","PMID:20483913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140101","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"tRNA (adenine(57)-N1)/(adenine(58)-N1)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.219"],"synonyms":[{"name":"tRNA (adenine(57)-N(1))/(adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-)/(adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-/adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58 N1-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N(1)-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N1-) methyltransferase activity","type":"exact"}],"termid":"GO:0043827"}


id: PBO:0048141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 5","termid":"PBO:0048141"}


id: PBO:0054458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1855","termid":"PBO:0054458"}


id: PBO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lgl family protein (predicted)","termid":"PBO:0000486"}


id: PBO:0072490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 19","termid":"PBO:0072490"}


id: PATO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000450 low percentage (obsolete PATO:0000450)","termid":"PATO:0000450"}


id: GO:0098829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of folic into the blood by absorption from the small intestine.","definition_xrefs":["PMID:19762432","GOC:BHF","GOC:dos","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal folate absorption","termid":"GO:0098829"}


id: PBO:0061740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 3","termid":"PBO:0061740"}


id: GO:0033381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the protease granzyme B to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protease localization to T cell secretory granule","termid":"GO:0033378"},{"relation_name":"part_of","term_name":"granzyme B localization to T cell secretory granule","termid":"GO:0033380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"establishment of granzyme B localization to T cell secretory granule","synonyms":[{"name":"T-lymphocyte secretory granule storage of granzyme B","type":"related"},{"name":"establishment of granzyme B localisation in T cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T-cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033381"}


id: PBO:0017925
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thei gene was called cdc2L (cdc2 left) in PMID:16453669, name not added as potentially misleading","termid":"PBO:0017925"}


id: PBO:0056394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 1","termid":"PBO:0056394"}


id: PBO:0048430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 1","termid":"PBO:0048430"}


id: PBO:0013450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein (predicted)","termid":"PBO:0013450"}


id: FYPO:0005747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein transport","termid":"FYPO:0005747"}


id: PBO:0072512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 41","termid":"PBO:0072512"}


id: PBO:0090514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi calcium and manganese antiporter Gdt1","termid":"PBO:0090514"}


id: PBO:0011980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad57/Rhp57","termid":"PBO:0011980"}


id: GO:0018585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluorene + 2 H+ + 2 e- + O2 = H2O + 9-fluorenol.","definition_xrefs":["UM-BBD_reactionID:r0407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fluorene oxygenase activity","termid":"GO:0018585"}


id: PBO:0048829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 13","termid":"PBO:0048829"}


id: PBO:0040043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARNT2 divergent transcript","termid":"PBO:0040043"}


id: SO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylguanosine","secondary_identifiers":["RNAMOD:032"],"synonyms":[{"name":"2'-O-methylguanosine","type":"exact"},{"name":"Gm","type":"exact"},{"name":"two prime O methylguanosine","type":"exact"}],"termid":"SO:0001327"}


id: PBO:0075793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 11 pseudogene 1","termid":"PBO:0075793"}


id: PBO:0054814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2227","termid":"PBO:0054814"}


id: PBO:0074416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM15 pseudogene 1","termid":"PBO:0074416"}


id: GO:0090354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of auxin metabolic process","synonyms":[{"name":"regulation of auxin metabolism","type":"exact"}],"termid":"GO:0090354"}


id: PBO:0040091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member K","termid":"PBO:0040091"}


id: GO:0008868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactitol-1-phosphate + NAD+ = D-tagatose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"galactitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.251-RXN","RHEA:15137"],"synonyms":[{"name":"galactitol-1-phosphate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008868"}


id: GO:0050833
data:
  {"annotated_genes":["SJAG_01924","SJAG_04593"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90031,110214],"is_not":false,"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyruvate, 2-oxopropanoate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372342"],"synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0050833","terms_by_termid":{"GO:0050833":null}}


id: PATO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000457 deviation(from_normal) value (obsolete PATO:0000457)","termid":"PATO:0000457"}


id: SO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of a 21 nucleotide double stranded, polyadenylated non coding RNA, transcribed from the TAS gene.","definition_xrefs":["PMID:16145017"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tasiRNA_primary_transcript","termid":"SO:0001801"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tasiRNA","synonyms":[{"name":"trans acting small interfering RNA","type":"related"}],"termid":"SO:0001800"}


id: PBO:0045997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1","termid":"PBO:0045997"}


id: GO:0051740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene binding","termid":"GO:0072328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ethylene binding","synonyms":[{"name":"ethene binding","type":"exact"}],"termid":"GO:0051740"}


id: GO:0046578
data:
  {"annotated_genes":["SJAG_01254","SJAG_02379","SJAG_00329","SJAG_04943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88454],"is_not":false,"summary":null,"term":"GO:0046578"},{"annotations":[107328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[101779,86690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046579"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Ras protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Ras protein signal transduction","termid":"GO:0007265"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00329":null,"SJAG_01254":null,"SJAG_02379":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046578","terms_by_termid":{"GO:0046578":null,"GO:0046579":null,"GO:0046580":null}}


id: FYPO:0006696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-homocysteine (SAH) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-homocysteine level during vegetative growth","synonyms":[{"name":"decreased S-adenosyl-L-homocysteine accumulation during vegetative growth","type":"related"},{"name":"decreased cellular S-adenosyl-L-homocysteine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosylhomocysteine level during vegetative growth","type":"exact"},{"name":"decreased cellular SAH level during vegetative growth","type":"exact"},{"name":"reduced cellular S-adenosyl-L-homocysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006696"}


id: GO:0034637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbohydrate biosynthetic process (obsolete GO:0034637)","termid":"GO:0034637"}


id: GO:0039706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a coreceptor. A coreceptor acts in cooperation with a primary receptor to transmit a signal within the cell.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"co-receptor binding","termid":"GO:0039706"}


id: PBO:0088307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec63","termid":"PBO:0088307"}


id: PBO:0034110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_at_point","termid":"PBO:0034110"}


id: PR:O94470
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC23G7.14 gene.","definition_xrefs":["UniProtKB:O94470","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23G7.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.14","synonyms":[{"name":"Spom972h-SPBC23G7.14","type":"exact"}],"termid":"PR:O94470"}


id: PBO:0063270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 16","termid":"PBO:0063270"}


id: PBO:0052278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5D pseudogene 1","termid":"PBO:0052278"}


id: GO:0018879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving biphenyl, a toxic aromatic hydrocarbon used as a heat transfer agent, as a fungistat in packaging citrus fruits and in plant disease control. Biphenyl can be chlorinated with 1-10 chlorine molecules to form polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biphenyl metabolic process","secondary_identifiers":["UM-BBD_pathwayID:bph"],"synonyms":[{"name":"biphenyl metabolism","type":"exact"},{"name":"xenene metabolic process","type":"exact"},{"name":"xenene metabolism","type":"exact"}],"termid":"GO:0018879"}


id: PATO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is less than moderate in type or degree or effect or force.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mild intensity","termid":"PATO:0000394"}


id: GO:0009745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of sucrose.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar mediated signaling pathway","termid":"GO:0010182"},{"relation_name":"part_of","term_name":"cellular response to sucrose stimulus","termid":"GO:0071329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sucrose mediated signaling","synonyms":[{"name":"sucrose mediated signalling","type":"exact"}],"termid":"GO:0009745"}


id: PBO:0057404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-1","termid":"PBO:0057404"}


id: GO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Par3, the tumor suppressor protein adenomatous polyposis coli (APC), and the kinesin-related protein KIF3A; involved in establishing neuronal cell polarity.","definition_xrefs":["PMID:15556865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Par3-APC-KIF3A complex","termid":"GO:0034748"}


id: PR:P87294
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sub1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcriptional coactivator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.02","synonyms":[{"name":"Spom972h-sub1","type":"exact"}],"termid":"PR:P87294"}


id: PBO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating cysteine peptidase Ulp2 (predicted)","termid":"PBO:0001168"}


id: PBO:0089131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot15","termid":"PBO:0089131"}


id: GO:0033946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the endohydrolysis of (1->4)-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"xyloglucan-specific endo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.151-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucanohydrolase activity","type":"broad"},{"name":"XEG","type":"related"},{"name":"XH","type":"related"},{"name":"[(1->6)-beta-D-xylo]-(1->4)-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"xyloglucan endo-beta-1,4-glucanase activity","type":"related"},{"name":"xyloglucanase activity","type":"related"},{"name":"xyloglucanendohydrolase activity","type":"related"}],"termid":"GO:0033946"}


id: PBO:0059836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission regulator 1 like","termid":"PBO:0059836"}


id: GO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Blocks the binding of interleukin-1 to the interleukin-1 receptor complex.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"interleukin-1 binding","termid":"GO:0019966"},{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"interleukin-1 receptor antagonist activity","synonyms":[{"name":"IL-1ra","type":"exact"}],"termid":"GO:0005152"}


id: PBO:0040028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARMCX3 antisense RNA 1","termid":"PBO:0040028"}


id: PBO:0016568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85a (predicted)","termid":"PBO:0016568"}


id: PBO:0078994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 2-1","termid":"PBO:0078994"}


id: PBO:0049325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIA subunit 2","termid":"PBO:0049325"}


id: PBO:0028036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_astral_microtubule_anchoring_at_mitotic_spindle_pole_body","termid":"PBO:0028036"}


id: PBO:0065631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 11","termid":"PBO:0065631"}


id: GO:1904314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methamphetamine hydrochloride stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22174933","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"},{"relation_name":"is_a","term_name":"response to methamphetamine hydrochloride","termid":"GO:1904313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methamphetamine hydrochloride","synonyms":[{"name":"cellular response to methamphetamine HCL","type":"exact"}],"termid":"GO:1904314"}


id: GO:0120179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an adherens junction into its constituent components. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:bc","PMID:25490267","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"},{"relation_name":"is_a","term_name":"cell-cell junction disassembly","termid":"GO:0150147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction disassembly","termid":"GO:0120179"}


id: PBO:0109089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 3","termid":"PBO:0109089"}


id: GO:1902523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K63-linked ubiquitination","termid":"GO:1900044"},{"relation_name":"is_a","term_name":"positive regulation of protein polyubiquitination","termid":"GO:1902916"},{"relation_name":"positively_regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein K63-linked ubiquitination","synonyms":[{"name":"activation of protein K63-linked polyubiquitination","type":"narrow"},{"name":"activation of protein K63-linked ubiquitination","type":"narrow"},{"name":"positive regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up regulation of protein K63-linked ubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked ubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked ubiquitination","type":"exact"}],"termid":"GO:1902523"}


id: GO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule nucleation","termid":"GO:0010968"},{"relation_name":"is_a","term_name":"positive regulation of microtubule polymerization","termid":"GO:0031116"},{"relation_name":"positively_regulates","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0065003","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"positive regulation of microtubule nucleation","termid":"GO:0090063"}


id: GO:0001097
data:
  {"annotated_genes":["SJAG_00159"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75189],"is_not":false,"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIH complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["PMID:16858867","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"TFIIH-class transcription factor complex binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"TFIIH-class transcription factor binding","type":"exact"}],"termid":"GO:0001097","terms_by_termid":{"GO:0001097":null}}


id: GO:0106358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + sn-glycerol 1-phosphate = dihydroxyacetone phosphate + H+ + NADPH.","definition_xrefs":["RHEA:21416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0050492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase [NADP+] activity","termid":"GO:0106358"}


id: PR:Q10061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsh1 gene.","definition_xrefs":["UniProtKB:Q10061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog lhs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.06","synonyms":[{"name":"Spom972h-lsh1","type":"exact"}],"termid":"PR:Q10061"}


id: PBO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.8","termid":"PBO:0001483"}


id: PBO:0077928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 1","termid":"PBO:0077928"}


id: PBO:0080597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 27","termid":"PBO:0080597"}


id: PBO:0068846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 84, pseudogene","termid":"PBO:0068846"}


id: PBO:0083452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CTI6/YPL181W","termid":"PBO:0083452"}


id: FYPO:0001486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during cellular response to osmotic stress","termid":"FYPO:0003793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to salt stress","synonyms":[{"name":"normal RNA accumulation during cellular response to salt stress","type":"related"},{"name":"normal RNA level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to salt stress","type":"narrow"},{"name":"normal transcript level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001486"}


id: GO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3b product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"complement component C3b binding","termid":"GO:0001851"}


id: PBO:0066789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 88","termid":"PBO:0066789"}


id: PBO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_alpha-glucosidase_activity","termid":"PBO:0030602"}


id: GO:0110158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium-dependent protease complex that processes its substrate by limited proteolysis rather than degrading it. In some cases limited proteolysis is required for the activation of its substrate.","definition_xrefs":["GOC:bhm","PMID:10639123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caspase complex","termid":"GO:0008303"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calpain complex","synonyms":[{"name":"M-calpain","type":"narrow"},{"name":"mu-calpain","type":"narrow"}],"termid":"GO:0110158"}


id: PBO:0026710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_MCM_complex_binding","termid":"PBO:0026710"}


id: PBO:0001444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate adaptor for cullin 3 ubiquitin ligase Btb3","termid":"PBO:0001444"}


id: PBO:0051513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 3","termid":"PBO:0051513"}


id: GO:0052001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of bacterial clusters to the surface of the host in a type IV pili dependent manner. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion to host cell via type IV pili","synonyms":[{"name":"type IV pili-dependent localized adherence to host","type":"exact"}],"termid":"GO:0052001"}


id: PBO:0051994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional adhesion molecule 2","termid":"PBO:0051994"}


id: GO:0019384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caprolactam metabolic process","termid":"GO:0018883"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"caprolactam catabolic process","secondary_identifiers":["MetaCyc:P621-PWY"],"synonyms":[{"name":"caprolactam breakdown","type":"exact"},{"name":"caprolactam catabolism","type":"exact"},{"name":"caprolactam degradation","type":"exact"}],"termid":"GO:0019384"}


id: PBO:0089673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multispanning 7TM plasma membrane rhodopsin family protein, implicated in signalling","termid":"PBO:0089673"}


id: PR:O94650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02376","PRO:DNx","PANTHER:PTHR13042:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like modifier hub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.03","secondary_identifiers":["UniProtKB:O94650"],"synonyms":[{"name":"Spom972h-UBL5","type":"exact"}],"termid":"PR:O94650"}


id: PBO:0082141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Chs3p (chitin synthase III) during vegetative growth; recruits Chs3p to the bud neck via interaction with Bni4p; SKT5 has a paralog, SHC1, that arose from the whole genome duplication","termid":"PBO:0082141"}


id: GO:2001002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of hemicellulose catabolic process","termid":"GO:2000990"},{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"positively_regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of xylan catabolic process","synonyms":[{"name":"positive regulation of xylan breakdown","type":"exact"},{"name":"positive regulation of xylan catabolism","type":"exact"},{"name":"positive regulation of xylan degradation","type":"exact"}],"termid":"GO:2001002"}


id: GO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of norepinephrine secretion","termid":"GO:0014061"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of norepinephrine secretion","termid":"GO:0010701"}


id: PBO:0005287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-GATA type (predicted)","termid":"PBO:0005287"}


id: GO:1902493
data:
  {"annotated_genes":["SJAG_04205","SJAG_03776","SJAG_02920","SJAG_00783","SJAG_04815","SJAG_04355","SJAG_01658","SJAG_00087","SJAG_03628","SJAG_06449","SJAG_02927","SJAG_00187","SJAG_00676","SJAG_02458","SJAG_04793","SJAG_01016","SJAG_04097","SJAG_02066","SJAG_04131","SJAG_03792","SJAG_03215","SJAG_01009","SJAG_02726","SJAG_01385","SJAG_02541","SJAG_02629","SJAG_02990","SJAG_01475","SJAG_01711","SJAG_02165","SJAG_03036","SJAG_04631","SJAG_00545","SJAG_02773","SJAG_03599","SJAG_00349","SJAG_00184","SJAG_04179","SJAG_03230","SJAG_03045","SJAG_04613","SJAG_02385","SJAG_00411","SJAG_03145","SJAG_03752","SJAG_03668","SJAG_05282","SJAG_04274","SJAG_00641","SJAG_01826","SJAG_00584","SJAG_03579"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043189"},{"annotations":[83912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000123"},{"annotations":[86281,101156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070776"},{"annotations":[95411,101157,100273,86282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[114075,112890,84901,106359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[111406,98361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[108788,99412,101338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"},{"annotations":[101158,89585,103833,102391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[86283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"},{"annotations":[99874,89640,92930,109167,108219,97476,94704,114655,108986,111661,96753,89938,87932,95412,104986,86213,102763,100562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"},{"annotations":[113649,83977,84781,83821,94237,99188,103586,108988,112370,101641,113697,86941,87933,111445,103221,93538,107719,110356,108545,102788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[57802,62791,57915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of acetyltransferase activity.","definition_xrefs":["GOC:TermGenie","PMID:8077207","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00411":null,"SJAG_00545":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00783":null,"SJAG_01009":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01826":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02385":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02629":null,"SJAG_02726":null,"SJAG_02773":null,"SJAG_02920":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03045":null,"SJAG_03145":null,"SJAG_03215":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03628":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04355":null,"SJAG_04613":null,"SJAG_04631":null,"SJAG_04793":null,"SJAG_04815":null,"SJAG_05282":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:1902493","terms_by_termid":{"GO:0000123":null,"GO:0000124":null,"GO:0031415":null,"GO:0031416":null,"GO:0031417":null,"GO:0033100":null,"GO:0035267":null,"GO:0036410":null,"GO:0043189":null,"GO:0046695":null,"GO:0070776":null,"GO:1990467":null}}


id: PBO:0005278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Spc7","termid":"PBO:0005278"}


id: PBO:0062624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 1","termid":"PBO:0062624"}


id: PBO:0052967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE-1 type transposase domain containing 1 pseudogene 1","termid":"PBO:0052967"}


id: PBO:0029008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleoplasm","termid":"PBO:0029008"}


id: GO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + inorganic triphosphate = diphosphate + phosphate.","definition_xrefs":["EC:3.6.1.25","RHEA:14157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inorganic triphosphate phosphatase activity","secondary_identifiers":["MetaCyc:TRIPHOSPHATASE-RXN","KEGG_REACTION:R00138"],"synonyms":[{"name":"inorganic triphosphatase activity","type":"related"},{"name":"triphosphatase activity","type":"broad"},{"name":"triphosphate phosphohydrolase activity","type":"related"},{"name":"tripolyphosphatase activity","type":"exact"}],"termid":"GO:0050355"}


id: GO:0033326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of cerebrospinal fluid (CSF) from the choroid plexus of the lateral, third and fourth ventricles. The cerebrospinal fluid is a clear liquid that located within the ventricles, spinal canal, and subarachnoid spaces.","definition_xrefs":["PMID:10716451","GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cerebrospinal fluid secretion","synonyms":[{"name":"CSF secretion","type":"exact"}],"termid":"GO:0033326"}


id: FYPO:0002720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more enzymes that degrades cell wall polysaccharides by hydrolyzing beta-glucan linkages. Cells stop growing (and may die) at a concentration of such enzymes that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to cell wall-degrading enzymes","termid":"FYPO:0001190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to beta-glucanase","synonyms":[{"name":"hypersensitive to beta-glucanase","type":"exact"},{"name":"sensitive to beta-glucanase during mitotic cell cycle","type":"related"},{"name":"sensitive to beta-glucanase during vegetative growth","type":"exact"}],"termid":"FYPO:0002720"}


id: GO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing electron carrier acting between cytochrome b(6)-f and P700 of photosystem I.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plastocyanin (obsolete GO:0015006)","synonyms":[{"name":"plastocyanin","type":"exact"}],"termid":"GO:0015006"}


id: GO:0072012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a glomerulus vasculature from an initial condition to its mature state. This process begins with the formation of the glomerulus vasculature and ends with the mature structure. The glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"is_a","term_name":"kidney vasculature development","termid":"GO:0061440"},{"relation_name":"part_of","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus vasculature development","synonyms":[{"name":"glomerulus capillary development","type":"related"}],"termid":"GO:0072012"}


id: FYPO:0005352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore mitosis","type":"exact"},{"name":"normal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"normal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005352"}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: PBO:0017987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haemolysin-III family plasma membrane receptor implicated in zinc ion homeostasis Izh2 (predicted)","termid":"PBO:0017987"}


id: PBO:0004112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit Ctu1","termid":"PBO:0004112"}


id: SO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_acetylation_site","synonyms":[{"name":"H3K4 acetylation site","type":"exact"},{"name":"H3K4ac","type":"exact"}],"termid":"SO:0001943"}


id: PBO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE","termid":"PBO:0000345"}


id: FYPO:0003388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biotin import","termid":"FYPO:0001744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased biotin import","synonyms":[{"name":"decreased biotin import across plasma membrane","type":"exact"},{"name":"decreased biotin import during mitotic cell cycle","type":"related"},{"name":"decreased biotin import during vegetative growth","type":"exact"},{"name":"decreased biotin import into cell","type":"exact"},{"name":"decreased biotin uptake","type":"exact"},{"name":"reduced biotin import","type":"exact"}],"termid":"FYPO:0003388"}


id: PBO:0089089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex (ER membrane insertion) TPR repeat subunit Sgt2","termid":"PBO:0089089"}


id: PBO:0059147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPN domain containing","termid":"PBO:0059147"}


id: SO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration whereby the copy number of a given regions is greater than the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_gain","synonyms":[{"name":"copy number gain","type":"exact"},{"name":"gain","type":"related"}],"termid":"SO:0001742"}


id: PR:Q10475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SAFB-like transcription modulator that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.03","secondary_identifiers":["UniProtKB:Q10475"],"synonyms":[{"name":"Spom972h-SLTM","type":"exact"},{"name":"eIF-4-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4G (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10475"}


id: PBO:0004659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein, histone chaperone Hip1","termid":"PBO:0004659"}


id: PBO:0017820
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caffeine Induced cell Death","termid":"PBO:0017820"}


id: PBO:0072132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 9","termid":"PBO:0072132"}


id: PBO:0057742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1537","termid":"PBO:0057742"}


id: PBO:0069346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 606, pseudogene","termid":"PBO:0069346"}


id: PBO:0090774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 for APC and SCF Ubc4/UbcP1","termid":"PBO:0090774"}


id: PBO:0042540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 7 pseudogene 1","termid":"PBO:0042540"}


id: PBO:0055357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2786","termid":"PBO:0055357"}


id: PR:O74897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc5 gene.","definition_xrefs":["UniProtKB:O74897","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.13","synonyms":[{"name":"Spom972h-swc5","type":"exact"}],"termid":"PR:O74897"}


id: PBO:0072269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 7","termid":"PBO:0072269"}


id: GO:0006621
data:
  {"annotated_genes":["SJAG_01001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87678],"is_not":false,"summary":null,"term":"GO:0006621"}]},"cv_name":"biological_process","definition":"The retention in the endoplasmic reticulum (ER) lumen of soluble resident proteins. Sorting receptors retrieve proteins with ER localization signals, such as KDEL and HDEL sequences or some transmembrane domains, that have escaped to the cis-Golgi network and return them to the ER. Abnormally folded proteins and unassembled subunits are also selectively retained in the ER.","definition_xrefs":["ISBN:0716731363","PMID:12972550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in endoplasmic reticulum","termid":"GO:0035437"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein retention in ER lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of protein location in ER lumen","type":"broad"}],"termid":"GO:0006621","terms_by_termid":{"GO:0006621":null}}


id: PBO:0028504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphodiesterase_I_activity","termid":"PBO:0028504"}


id: GO:0009917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a C-5 double bond in the B ring of a sterol.","definition_xrefs":["ISBN:0943088399"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol 5-alpha reductase activity (obsolete GO:0009917)","termid":"GO:0009917"}


id: PBO:0087123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-type ubiquitin ligase of the endosomal and vacuolar membranes; binds phosphatidylinositol 3-phosphate; contains a FYVE finger domain","termid":"PBO:0087123"}


id: PR:O59670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B subunit 6-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.07c","synonyms":[{"name":"Spom972h-sap14","type":"exact"},{"name":"pre-mRNA branch site p14-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59670"}


id: PBO:0089745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Mpp10","termid":"PBO:0089745"}


id: PBO:0090438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm6","termid":"PBO:0090438"}


id: PBO:0063224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 4","termid":"PBO:0063224"}


id: PBO:0029597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pyruvylated_galactose_absent_from_cell","termid":"PBO:0029597"}


id: FYPO:0005605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Ssb1 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Ssb1 foci","type":"related"},{"name":"increased duration of RPA focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad11 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rpa1 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Ssb1 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Ssb1 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005605"}


id: PBO:0050349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 52","termid":"PBO:0050349"}


id: PBO:0074233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC47A1 pseudogene 2","termid":"PBO:0074233"}


id: PBO:0048078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain like 18, pseudogene","termid":"PBO:0048078"}


id: GO:1990817
data:
  {"annotated_genes":["SJAG_02725","SJAG_04946","SJAG_01176","SJAG_00797","SJAG_02720","SJAG_02383","SJAG_02370","SJAG_03257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68798,83864,87204,91936,95842,99668,107264,114073],"is_not":false,"summary":null,"term":"GO:1990817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n)-3'-adenine ribonucleotide. The primer may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["PMID:13965521","RHEA:11332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_03257":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"poly(A) RNA polymerase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.7.19","MetaCyc:POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN","Reactome:R-HSA-72185","Reactome:R-HSA-9833031"],"synonyms":[{"name":"NTP polymerase activity","type":"broad"},{"name":"RNA adenylating enzyme","type":"exact"},{"name":"RNA adenyltransferase activity","type":"exact"},{"name":"RNA adenylyltransferase activity","type":"exact"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"GO:1990817","terms_by_termid":{"GO:1990817":null}}


id: PBO:0046034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 2","termid":"PBO:0046034"}


id: PBO:0040321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit epsilon","termid":"PBO:0040321"}


id: GO:1903742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["PMID:25329901","GO_REF:0000058","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"}


id: PBO:0042394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD302 molecule","termid":"PBO:0042394"}


id: GO:0102702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (+)-2-carene + diphosphoric acid.","definition_xrefs":["PMID:10700382","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-carene synthase activity","secondary_identifiers":["MetaCyc:RXN-5122"],"termid":"GO:0102702"}


id: GO:1900171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucocorticoid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid mediated signaling pathway","termid":"GO:1900169"},{"relation_name":"positively_regulates","term_name":"glucocorticoid mediated signaling pathway","termid":"GO:0043402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucocorticoid mediated signaling pathway","synonyms":[{"name":"activation of glucocorticoid mediated signaling pathway","type":"narrow"},{"name":"activation of glucocorticoid mediated signalling","type":"narrow"},{"name":"positive regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"up regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"up regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"up-regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"upregulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"upregulation of glucocorticoid mediated signalling","type":"exact"}],"termid":"GO:1900171"}


id: PBO:0088620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide pyrophosphatase Npp1","termid":"PBO:0088620"}


id: GO:0017180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of peptidyl-diphthine from other compounds, including peptidyl-histidine.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete protein histidyl modification to diphthine (obsolete GO:0017180)","synonyms":[{"name":"peptidyl-diphthine anabolism from peptidyl-histidine","type":"exact"},{"name":"peptidyl-diphthine biosynthetic process from peptidyl-histidine","type":"exact"},{"name":"peptidyl-diphthine formation from peptidyl-histidine","type":"exact"},{"name":"peptidyl-diphthine synthesis from peptidyl-histidine","type":"exact"}],"termid":"GO:0017180"}


id: GO:0015828
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63232],"is_not":false,"summary":null,"term":"GO:0015828"},{"annotations":[99678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"}]},"cv_name":"biological_process","definition":"The directed movement of tyrosine, 2-amino-3-(4-hydroxyphenyl)propanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"tyrosine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"L-tyrosine transport","type":"narrow"}],"termid":"GO:0015828","terms_by_termid":{"GO:0015828":null,"GO:0090514":null}}


id: PBO:0044374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYLD antisense RNA 1","termid":"PBO:0044374"}


id: PBO:0005174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp11","termid":"PBO:0005174"}


id: FYPO:0003371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:18256290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to actomyosin contractile ring","termid":"FYPO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0000138","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to actomyosin contractile ring abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003371"}


id: PBO:0089928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER DNAJ domain protein Erj5","termid":"PBO:0089928"}


id: PBO:0052382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF23 and PAQR5 antisense RNA 1","termid":"PBO:0052382"}


id: PBO:0084438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL2","termid":"PBO:0084438"}


id: PBO:0040271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophin 1","termid":"PBO:0040271"}


id: PBO:0072291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 9","termid":"PBO:0072291"}


id: PBO:0066624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC8 guanine nucleotide exchange factor A","termid":"PBO:0066624"}


id: PBO:0079204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR2 ribosome maturation factor","termid":"PBO:0079204"}


id: GO:2001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellooligosaccharide binding","termid":"GO:2001064"}


id: GO:0045852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pH elevation","termid":"GO:0045852"}


id: PBO:0000932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein protein Pof1","termid":"PBO:0000932"}


id: GO:0106388
data:
  {"annotated_genes":["SJAG_03755"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87832],"is_not":false,"summary":null,"term":"GO:0106388"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N1-methylpseudouridine in 18S rRNA + S-adenosyl-L-methionine = H+ + N1-methyl-N3-[(3S)-3-amino-3-carboxypropyl]pseudouridine in 18S rRNA + S-methyl-5'-thioadenosine.","definition_xrefs":["PMID:27084949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a rRNA","termid":"GO:0140102"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"18S rRNA aminocarboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:63296"],"termid":"GO:0106388","terms_by_termid":{"GO:0106388":null}}


id: PBO:0053024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3","termid":"PBO:0053024"}


id: FYPO:0005550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during cellular response to hydroxyurea","synonyms":[{"name":"normal protein accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal protein level during cellular response to HU","type":"exact"},{"name":"normal protein level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0005550"}


id: PBO:0042956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 10","termid":"PBO:0042956"}


id: GO:1990111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome specifically found in mammalian testis. Contains the proteasome activator PA200 in the regulatory particle, and beta1i, beta2i, beta5i and/or alpha4s in the core (20S) subunit. Beta1i, beta2i and beta5i are inducible catalytic subunits, closely related to beta1, beta2 and beta5. Alpha4s is a sperm-specific 20S subunit, but unlike other alternative 20S subunits alpha4s lies in the outer alpha-ring and lacks catalytic activity.","definition_xrefs":["GOC:sp","PMID:23706739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"spermatoproteasome complex","termid":"GO:1990111"}


id: PBO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 76 pseudogene","termid":"PBO:0070162"}


