# terms

id: PR:O74962
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pantothenate kinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03694","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.01c","secondary_identifiers":["UniProtKB:O74962"],"synonyms":[{"name":"Spom972h-PANK3","type":"exact"},{"name":"pantothenic acid kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74962"}


id: PBO:0078050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 40","termid":"PBO:0078050"}


id: GO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of butyrate, the anion of butyric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"},{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"butyrate catabolic process","secondary_identifiers":["GO:0043440"],"synonyms":[{"name":"butanoic acid breakdown","type":"exact"},{"name":"butanoic acid catabolic process","type":"exact"},{"name":"butanoic acid catabolism","type":"exact"},{"name":"butanoic acid degradation","type":"exact"},{"name":"butyrate breakdown","type":"exact"},{"name":"butyrate catabolism","type":"exact"},{"name":"butyrate degradation","type":"exact"}],"termid":"GO:0046359"}


id: PBO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, transcriptional and translational regulator (predicted)","termid":"PBO:0004282"}


id: GO:0036477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon.","definition_xrefs":["GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatodendritic compartment","termid":"GO:0036477"}


id: GO:0140984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H4 L-lysine (position 12) = S-adenosyl-L-homocysteine + histone H4 N6-methyl-L-lysine (position 12). This reaction is the addition of a methyl group to the lysine residue at position 12 of the histone H4 protein.","definition_xrefs":["PMID:12086618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0008276","GO:0003824","GO:0016741","GO:0140096"],"is_obsolete":false,"name":"histone H4K12 methyltransferase activity","synonyms":[{"name":"histone H4 lysine 12-specific methyltransferase activity","type":"exact"},{"name":"histone H4K12 methylase activity","type":"broad"},{"name":"histone H4K12 methylation","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone methylase activity (H4-K12 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone-H4K12 methyltransferase activity","type":"exact"}],"termid":"GO:0140984"}


id: GO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + ceramide = ADP + ceramide-1-phosphate.","definition_xrefs":["EC:2.7.1.138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ceramide kinase activity","secondary_identifiers":["Reactome:R-HSA-1638845","MetaCyc:CERAMIDE-KINASE-RXN","RHEA:17929"],"synonyms":[{"name":"ATP:ceramide 1-phosphotransferase activity","type":"related"},{"name":"acylsphingosine kinase activity","type":"related"}],"termid":"GO:0001729"}


id: MOD:00209
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["PubMed:3181159","RESID:AA0204#SER","PubMed:3769923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-D-cysteine","termid":"MOD:01850"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine (Cys-Ser)","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-D-cysteine (Ser-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"},{"name":"XLNK-(D)SCys-VinAm","type":"exact"}],"termid":"MOD:00209"}


id: GO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte anergy","termid":"GO:0002913"},{"relation_name":"positively_regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell anergy","synonyms":[{"name":"activation of B cell anergy","type":"narrow"},{"name":"positive regulation of B lymphocyte anergy","type":"exact"},{"name":"positive regulation of B-cell anergy","type":"exact"},{"name":"positive regulation of B-lymphocyte anergy","type":"exact"},{"name":"stimulation of B cell anergy","type":"narrow"},{"name":"up regulation of B cell anergy","type":"exact"},{"name":"up-regulation of B cell anergy","type":"exact"},{"name":"upregulation of B cell anergy","type":"exact"}],"termid":"GO:0002672"}


id: GO:0048773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an erythrophore cell. Erythrophores are pigment cells derived from the neural crest. They contain pteridine and/or carotenoid pigments in structures called pterinosomes or erythrosomes. This gives them an orange to red appearance.","definition_xrefs":["GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrophore differentiation","synonyms":[{"name":"erythrophore cell differentiation","type":"exact"}],"termid":"GO:0048773"}


id: PBO:0048620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 1","termid":"PBO:0048620"}


id: PBO:0087483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability; plays a role in copper homeostasis","termid":"PBO:0087483"}


id: FYPO:0005618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of repair of double-strand breaks formed as part of meiotic recombination is longer than normal.","definition_xrefs":["PomBase:mah","PMID:18378696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"increased duration of meiotic recombination double-strand break repair","synonyms":[{"name":"increased duration of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair during meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"prolonged meiotic recombination double-strand break repair","type":"exact"}],"termid":"FYPO:0005618"}


id: PBO:0005043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1751 family protein","termid":"PBO:0005043"}


id: PBO:0045590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 1 (pseudogene)","termid":"PBO:0045590"}


id: PBO:0041972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC13 antisense RNA 2","termid":"PBO:0041972"}


id: PBO:0049003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1 like","termid":"PBO:0049003"}


id: GO:1900557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of emericellamide.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"depsipeptide biosynthetic process","termid":"GO:0050763"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"},{"relation_name":"is_a","term_name":"emericellamide metabolic process","termid":"GO:1900555"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"emericellamide biosynthetic process","synonyms":[{"name":"emericellamide anabolism","type":"exact"},{"name":"emericellamide biosynthesis","type":"exact"},{"name":"emericellamide formation","type":"exact"},{"name":"emericellamide synthesis","type":"exact"}],"termid":"GO:1900557"}


id: PBO:0076163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase 1","termid":"PBO:0076163"}


id: PBO:0070769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 5","termid":"PBO:0070769"}


id: PBO:0084460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase involved in protein N-glycosylation; member of the KTR1 family; located in the Golgi apparatus; YUR1 has a paralog, KTR2, that arose from the whole genome duplication","termid":"PBO:0084460"}


id: GO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an AV node cardiomyocyte and a bundle of His cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication by electrical coupling","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086053"}


id: GO:0035062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleoplasmic speckle distributed in the interchromatin space of cells in close proximity to chromatin. Omega speckles are distinct from interchromatin granules and contain heterogeneous nuclear RNA-binding proteins (hnRNPs).","definition_xrefs":["GOC:bf","PMID:10984439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear speck","termid":"GO:0016607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"omega speckle","termid":"GO:0035062"}


id: GO:0007144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the first meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"female meiosis I","synonyms":[{"name":"female meiosis I nuclear division","type":"exact"}],"termid":"GO:0007144"}


id: GO:1901396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta2 production","termid":"GO:0032912"},{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta activation","termid":"GO:1901389"},{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta2 activation","termid":"GO:1901395"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta2 activation","termid":"GO:0036365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta2 activation","synonyms":[{"name":"down regulation of TGF-beta 2 activation","type":"exact"},{"name":"down regulation of TGFB2 activation","type":"exact"},{"name":"down regulation of TGFbeta 2 activation","type":"exact"},{"name":"down regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"down-regulation of TGF-beta 2 activation","type":"exact"},{"name":"down-regulation of TGFB2 activation","type":"exact"},{"name":"down-regulation of TGFbeta 2 activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"downregulation of TGF-beta 2 activation","type":"exact"},{"name":"downregulation of TGFB2 activation","type":"exact"},{"name":"downregulation of TGFbeta 2 activation","type":"exact"},{"name":"downregulation of transforming growth factor beta2 activation","type":"exact"},{"name":"inhibition of TGF-beta 2 activation","type":"exact"},{"name":"inhibition of TGFB2 activation","type":"exact"},{"name":"inhibition of TGFbeta 2 activation","type":"exact"},{"name":"inhibition of transforming growth factor beta2 activation","type":"narrow"},{"name":"negative regulation of TGF-beta 2 activation","type":"exact"},{"name":"negative regulation of TGFB2 activation","type":"exact"},{"name":"negative regulation of TGFbeta 2 activation","type":"exact"}],"termid":"GO:1901396"}


id: FYPO:0006451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylated histone binding by a gene product (usually a protein) in a mutant occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal methylated histone binding","termid":"FYPO:0004231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased methylated histone binding","synonyms":[{"name":"reduced methylated histone binding","type":"exact"}],"termid":"FYPO:0006451"}


id: PBO:0069566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 838, pseudogene","termid":"PBO:0069566"}


id: FYPO:0005691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body (SPB) moves rapidly back and forth to a lower extent and over a smaller area than normal, causing decreased chromosome movement. Normally, SPB oscillation occurs during mitotic interphase (as well as prophase) but is restricted to a small space.","definition_xrefs":["PomBase:mah","PMID:19001497","PMID:12390246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"},{"relation_name":"is_a","term_name":"decreased microtubule-based movement during vegetative growth","termid":"FYPO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"decreased mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"decreased mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"decreased mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"decreased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"decreased spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"reduced mitotic spindle pole body oscillation during mitotic interphase","type":"exact"}],"termid":"FYPO:0005691"}


id: PATO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A force which relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased force","synonyms":[{"name":"increased force amplitude","type":"exact"}],"termid":"PATO:0002245"}


id: PBO:0075584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 8 (putative)","termid":"PBO:0075584"}


id: PBO:0057164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320b-2","termid":"PBO:0057164"}


id: PBO:0005409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf5","termid":"PBO:0005409"}


id: GO:2000357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"},{"relation_name":"negatively_regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney smooth muscle cell differentiation","termid":"GO:2000357"}


id: PBO:0003397
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Activated Ras1","termid":"PBO:0003397"}


id: GO:0016216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + O2 = 2 H2O + isopenicillin N.","definition_xrefs":["EC:1.21.3.1","RHEA:22428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isopenicillin-N synthase activity","secondary_identifiers":["MetaCyc:1.21.3.1-RXN","KEGG_REACTION:R04872"],"synonyms":[{"name":"N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine:oxygen oxidoreductase (cyclizing)","type":"related"},{"name":"isopenicillin N synthase activity","type":"related"},{"name":"isopenicillin-N synthetase activity","type":"exact"}],"termid":"GO:0016216"}


id: PBO:0079395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 2","termid":"PBO:0079395"}


id: PBO:0045719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4","termid":"PBO:0045719"}


id: PBO:0091003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4451 family conserved fungal protein","termid":"PBO:0091003"}


id: FYPO:0002192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a normal volume and spheroid shape, and contain one or more septa each. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, normal volume septated spheroid cells (obsolete FYPO:0002192)","synonyms":[{"name":"inviable microcolony, normal volume septated rounded cells","type":"exact"},{"name":"inviable microcolony, normal volume septated spheroid vegetative cells","type":"exact"}],"termid":"FYPO:0002192"}


id: PBO:0085604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in clathrin-mediated endocytosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YHR097C has a paralog, PAL1, that arose from the whole genome duplication","termid":"PBO:0085604"}


id: FYPO:0005766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions where nucleosomes are depleted.","definition_xrefs":["PomBase:mah","PMID:27611590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased replication fork pausing at nucleosome-depleted regions","synonyms":[{"name":"increased replication fork pausing at nucleosome-depleted regions during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at nucleosome-depleted regions during vegetative growth","type":"exact"}],"termid":"FYPO:0005766"}


id: PBO:0048959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein 2","termid":"PBO:0048959"}


id: PBO:0036398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily Ysa1 (predicted)","termid":"PBO:0036398"}


id: PATO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete irregular shape (obsolete PATO:0000940)","termid":"PATO:0000940"}


id: PBO:0068700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 81, pseudogene","termid":"PBO:0068700"}


id: PBO:0068523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 119, pseudogene","termid":"PBO:0068523"}


id: PBO:0089433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Hhp2","termid":"PBO:0089433"}


id: PBO:0110044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP3 pseudogene 1","termid":"PBO:0110044"}


id: PBO:0051640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP U3 small nucleolar ribonucleoprotein 4","termid":"PBO:0051640"}


id: GO:0021946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the ventricular zone to the deep hindbrain nuclei.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","PMID:15157725","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deep nuclear neuron cell migration","termid":"GO:0021946"}


id: GO:0098854
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection originating from a renal glomerular podocyte and extending to the renal glomerular podocyte foot.","definition_xrefs":["PMID:24309184","PMID:25324828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"podocyte primary projection","synonyms":[{"name":"glomerular visceral epithelial cell primary projection","type":"exact"},{"name":"podocyte major process","type":"exact"},{"name":"primary podocyte process","type":"exact"}],"termid":"GO:0098854"}


id: GO:0047448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydro-4-deoxy-D-glucarate + H+ = 2,5-dioxopentanoate + CO2 + H2O.","definition_xrefs":["EC:4.2.1.41","RHEA:24608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"5-dehydro-4-deoxyglucarate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02279","MetaCyc:4.2.1.41-RXN"],"synonyms":[{"name":"5-dehydro-4-deoxy-D-glucarate hydro-lyase (decarboxylating)","type":"related"},{"name":"5-dehydro-4-deoxy-D-glucarate hydro-lyase (decarboxylating; 2,5-dioxopentanoate-forming)","type":"related"},{"name":"5-keto-4-deoxy-glucarate dehydratase activity","type":"related"},{"name":"D-4-deoxy-5-ketoglucarate hydro-lyase activity","type":"related"},{"name":"deoxyketoglucarate dehydratase activity","type":"related"}],"termid":"GO:0047448"}


id: PBO:0066222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 26","termid":"PBO:0066222"}


id: PBO:0091123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7","termid":"PBO:0091123"}


id: GO:0010793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of mRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"mRNA export from nucleus","termid":"GO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"regulation of mRNA export from nucleus","termid":"GO:0010793"}


id: PBO:0030943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_depolymerization","termid":"PBO:0030943"}


id: GO:1900350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"activation of methane biosynthetic process from methylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from methylamine","type":"exact"}],"termid":"GO:1900350"}


id: GO:0034111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"negatively_regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"}


id: PR:P19117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inorganic pyrophosphatase 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00883","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.05","secondary_identifiers":["UniProtKB:P19117"],"synonyms":[{"name":"PPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPA2","type":"exact"},{"name":"pyrophosphate phospho-hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P19117"}


id: PBO:0030641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glucose_carbon_source","termid":"PBO:0030641"}


id: PBO:0031239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_S_phase_of_mitotic_cell_cycle_(obsolete_FYPO:0000192)","termid":"PBO:0031239"}


id: GO:0140994
data:
  {"annotated_genes":["SJAG_01654","SJAG_03126","SJAG_01286","SJAG_03967","SJAG_03624","SJAG_02592","SJAG_03061","SJAG_00150","SJAG_02389","SJAG_02203","SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93556,91489,101926,90016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008353"},{"annotations":[87138,89279,92897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[89978,101927,104967,91490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140834"},{"annotations":[89979,104968,101928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140836"},{"annotations":[91516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[107946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"A catalytic activity that acts on the RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS). Reversible modifications cof the RNA polymerase II CTD repeats contribute to regulation of RNA polymerase activity.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01286":null,"SJAG_01654":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02592":null,"SJAG_03061":null,"SJAG_03126":null,"SJAG_03624":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat modifying activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II CTD repeat modifying activity","type":"exact"},{"name":"RNA polymerase II large subunit CTD heptapeptide repeat modifying activity","type":"exact"}],"termid":"GO:0140994","terms_by_termid":{"GO:0008353":null,"GO:0008420":null,"GO:0140834":null,"GO:0140836":null,"GO:0180005":null,"GO:0180007":null}}


id: PR:G2TRU0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ost5 gene.","definition_xrefs":["UniProtKB:G2TRU0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit ost5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.19c","synonyms":[{"name":"Spom972h-ost5","type":"exact"},{"name":"oligosaccharyl transferase subunit ost5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit zeta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRU0"}


id: GO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) -> ADP + phosphate + Na+(out), by a rotational mechanism.","definition_xrefs":["RHEA:58157","PMID:30791207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium-transporting ATPase activity, rotational mechanism","secondary_identifiers":["MetaCyc:3.6.3.15-RXN","RHEA:58156","EC:7.2.2.1"],"synonyms":[{"name":"ATP phosphohydrolase (Na+-transporting) activity","type":"related"},{"name":"ATP synthase, sodium ion specific activity","type":"related"},{"name":"Na(+)-translocating ATPase activity","type":"broad"},{"name":"Na(+)-transporting two-sector ATPase activity","type":"related"},{"name":"Na+-translocating ATPase activity","type":"related"},{"name":"Na+-translocating F1Fo-ATPase","type":"narrow"},{"name":"Na+-transporting two-sector ATPase","type":"narrow"},{"name":"sodium transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"sodium-translocating F-type ATPase activity","type":"narrow"},{"name":"sodium-translocating V-type ATPase activity","type":"narrow"},{"name":"sodium-transporting two-sector ATPase activity","type":"narrow"},{"name":"vacuolar-type Na+-ATPase","type":"narrow"},{"name":"vacuolar-type Na+-translocating ATPase","type":"narrow"}],"termid":"GO:0046962"}


id: PBO:0034689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K16_acetylation","termid":"PBO:0034689"}


id: GO:0030041
data:
  {"annotated_genes":["SJAG_01268","SJAG_00677","SJAG_04982","SJAG_02245","SJAG_00279","SJAG_04100","SJAG_04479","SJAG_00521","SJAG_01894","SJAG_03086","SJAG_04703","SJAG_01993","SJAG_03655","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64767,87881,89457,93437,94571],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[110372,114728,94640,83732,87882],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[98545,85336,101013,86201,106050],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93440,110375],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03655":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin filament polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin polymerization","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0030041","terms_by_termid":{"GO:0030041":null,"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: MOD:02012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a oleoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"oleoylated residue","termid":"MOD:02012"}


id: GO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"}


id: PBO:0067821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 123","termid":"PBO:0067821"}


id: PR:O94661
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TBC1 domain family member 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02782","PANTHER:PTHR20913:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.03c","secondary_identifiers":["UniProtKB:O94661"],"synonyms":[{"name":"Spom972h-TBC1D20","type":"exact"}],"termid":"PR:O94661"}


id: PBO:0012256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TRK1 and TRK2","termid":"PBO:0012256"}


id: GO:0004100
data:
  {"annotated_genes":["SJAG_04868","SJAG_00442"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84196,100509],"is_not":false,"summary":null,"term":"GO:0004100"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + [->4)-N-acetyl-beta-D-glucosaminyl-(1-](n) = UDP + [->4)-N-acetyl-beta-D-glucosaminyl-(1-](n+1).","definition_xrefs":["EC:2.4.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"chitin synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CHITIN-SYNTHASE-RXN","RHEA:16637"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyl-transferase activity","type":"related"},{"name":"chitin synthetase activity","type":"related"},{"name":"chitin-UDP N-acetylglucosaminyltransferase activity","type":"related"},{"name":"chitin-UDP acetyl-glucosaminyl transferase activity","type":"related"},{"name":"chitin-uridine diphosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"trans-N-acetylglucosaminosylase activity","type":"related"}],"termid":"GO:0004100","terms_by_termid":{"GO:0004100":null}}


id: PBO:0061477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal regeneration related protein","termid":"PBO:0061477"}


id: PBO:0040913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 17","termid":"PBO:0040913"}


id: GO:1990919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a proteasome complex and a nuclear inner membrane, to maintain the nuclear membrane localization of the proteasome.","definition_xrefs":["PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"proteasome-nuclear membrane anchor activity","synonyms":[{"name":"nuclear membrane proteasome adaptor","type":"related"},{"name":"nuclear membrane proteasome anchor","type":"exact"},{"name":"nuclear membrane proteasome tether","type":"exact"},{"name":"nuclear membrane proteasome tether activity","type":"exact"},{"name":"nuclear membrane-proteasome anchor activity","type":"exact"},{"name":"nuclear membrane-proteasome tether activity","type":"exact"},{"name":"tethering factor for nuclear proteasome","type":"related"}],"termid":"GO:1990919"}


id: GO:0180023
data:
  {"annotated_genes":["SJAG_02868","SJAG_04180","SJAG_02436","SJAG_01161","SJAG_05248","SJAG_05679","SJAG_04992","SJAG_01122","SJAG_02840","SJAG_02427","SJAG_03466","SJAG_02535","SJAG_04599","SJAG_01339","SJAG_04492","SJAG_04304"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83112,87645,90489,92767,93696,95199,97696,97697,98316,99894,99972,100126,100654,101063,106686,106687,111418,111419,112665,112666],"is_not":false,"summary":null,"term":"GO:0180023"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cytosolic large ribosomal subunit.","definition_xrefs":["PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02535":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_03466":null,"SJAG_04180":null,"SJAG_04304":null,"SJAG_04492":null,"SJAG_04599":null,"SJAG_04992":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"cytosolic large ribosomal subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180023","terms_by_termid":{"GO:0180023":null}}


id: GO:0050493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-threonyl ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a threonyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor biosynthetic process","termid":"GO:0006506"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0042158"],"is_obsolete":false,"name":"GPI anchor biosynthetic process via N-threonyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPI anchor anabolism via N-threonyl-glycosylphosphatidylinositolethanolamine","type":"exact"},{"name":"GPI anchor formation via N-threonyl-glycosylphosphatidylinositolethanolamine","type":"exact"},{"name":"GPI anchor synthesis via N-threonyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"GO:0050493"}


id: FYPO:0001259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hypoxia","synonyms":[{"name":"decreased RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"decreased RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"decreased RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"decreased transcript level during cellular response to hypoxia","type":"exact"},{"name":"reduced RNA level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001259"}


id: PBO:0029402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_cell_division_site","termid":"PBO:0029402"}


id: PBO:0077153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 3B","termid":"PBO:0077153"}


id: GO:0018712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-5-oxohexanoyl-CoA + CoASH = 3-hydroxybutyryl-CoA + acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA thiolase activity","secondary_identifiers":["MetaCyc:R7-RXN"],"termid":"GO:0018712"}


id: PBO:0078234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 16","termid":"PBO:0078234"}


id: GO:0019018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of two sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete bipartite viral genome (obsolete GO:0019018)","termid":"GO:0019018"}


id: PBO:0047632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 1","termid":"PBO:0047632"}


id: PBO:0040295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3","termid":"PBO:0040295"}


id: PBO:0084259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol polyphosphate multikinase (IPMK); sequentially phosphorylates Ins(1,4,5)P3 to form Ins(1,3,4,5,6)P5; also has diphosphoinositol polyphosphate synthase activity; regulates genes responsive to arginine, phosphate, and nitrogen; needed by most [PSI+] variants for prion propagation","termid":"PBO:0084259"}


id: PBO:0070398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor C","termid":"PBO:0070398"}


id: GO:0070008
data:
  {"annotated_genes":["SJAG_04928","SJAG_04819","SJAG_01868","SJAG_00975"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100234,87355,83679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[97080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type peptidase activity","termid":"GO:0008236"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01868":null,"SJAG_04819":null,"SJAG_04928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003824","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"serine-type exopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070008","terms_by_termid":{"GO:0004185":null,"GO:0008240":null}}


id: GO:0099042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The first step in clathrin-dependent endocytosis: invagination of the plasma membrane to form a pit.","definition_xrefs":["PMID:21779028","GOC:dos","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleation of clathrin-coated pit (obsolete GO:0099042)","termid":"GO:0099042"}


id: PBO:0017489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-never_in_taxon","termid":"PBO:0017489"}


id: PBO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 9","termid":"PBO:0043448"}


id: PBO:0048769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor gamma","termid":"PBO:0048769"}


id: PBO:0045780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodysplasin A","termid":"PBO:0045780"}


id: FYPO:0001926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to hydroxyurea","synonyms":[{"name":"normal cellular response to HU","type":"exact"},{"name":"normal cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0001926"}


id: SO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_2prime_O_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethylguanosine","secondary_identifiers":["RNAMOD:096"],"synonyms":[{"name":"1,2'-O-dimethylguanosine","type":"exact"},{"name":"m1Gm","type":"exact"},{"name":"one two prime O dimethylguanosine","type":"exact"}],"termid":"SO:0001340"}


id: PBO:0053256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 9","termid":"PBO:0053256"}


id: PBO:0081173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 16","termid":"PBO:0081173"}


id: PBO:0053457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 410","termid":"PBO:0053457"}


id: PBO:0017969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase regulatory unit Ilv6 (predicted)","termid":"PBO:0017969"}


id: PBO:0080182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 3","termid":"PBO:0080182"}


id: PBO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase","termid":"PBO:0090228"}


id: GO:0035697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a CD8-positive, alpha-beta T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000625","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}


id: PBO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 10","termid":"PBO:0047177"}


id: GO:0006499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein lipidation","termid":"GO:0006498"},{"relation_name":"is_a","term_name":"protein myristoylation","termid":"GO:0018377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal protein myristoylation","termid":"GO:0006499"}


id: GO:0032984
data:
  {"annotated_genes":["SJAG_04038","SJAG_04841","SJAG_00390","SJAG_03232","SJAG_02560","SJAG_02433","SJAG_05296","SJAG_04312","SJAG_04703","SJAG_02336","SJAG_02314","SJAG_03126","SJAG_02624","SJAG_01894","SJAG_00330","SJAG_03345","SJAG_01224","SJAG_04283","SJAG_02189","SJAG_01993","SJAG_00642","SJAG_02601","SJAG_02700","SJAG_05265","SJAG_03380","SJAG_02414","SJAG_00974","SJAG_02699","SJAG_01518","SJAG_00597","SJAG_03025","SJAG_00338","SJAG_03949","SJAG_01696","SJAG_00279","SJAG_01252","SJAG_00286","SJAG_02812","SJAG_00308","SJAG_01653","SJAG_03301","SJAG_05025","SJAG_04129","SJAG_03658","SJAG_06309","SJAG_01297","SJAG_05221","SJAG_04909","SJAG_02704","SJAG_00723","SJAG_02691","SJAG_00840","SJAG_00206"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[88101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030043"},{"annotations":[92991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[109690,83684,107017,85600,84762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097352"},{"annotations":[90275],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[114728,110372,83732,94640,87882],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[85819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[90454,103066,105089,112109,105088,86623,90785,90786,92170,113586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[101762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903259"},{"annotations":[104175,85125,94358,114228,99734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[97862,100551,91620,94386,91178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[99501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[113002,85585,92786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"},{"annotations":[104183,99742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[93336],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[97641],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[107942],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[90455,66478,68382],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[107685],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"},{"annotations":[86699,96522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035494"},{"annotations":[85709,109918,100365,84488,83245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"},{"annotations":[98383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035617"},{"annotations":[88206],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031564"},{"annotations":[61718,99224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006415"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-containing macromolecular complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"protein-containing complex 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complex disassembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0043624","GO:0034623","GO:0043241"],"synonyms":[{"name":"cellular macromolecule complex disassembly","type":"related"},{"name":"cellular protein complex disassembly","type":"related"},{"name":"macromolecule complex disassembly","type":"related"},{"name":"protein complex disassembly","type":"exact"}],"termid":"GO:0032984","terms_by_termid":{"GO:0000390":null,"GO:0002184":null,"GO:0006337":null,"GO:0006415":null,"GO:0006449":null,"GO:0007019":null,"GO:0016240":null,"GO:0030042":null,"GO:0030043":null,"GO:0031117":null,"GO:0031564":null,"GO:0035494":null,"GO:0035617":null,"GO:0045905":null,"GO:0051016":null,"GO:0060172":null,"GO:0070126":null,"GO:0070462":null,"GO:0072318":null,"GO:0097352":null,"GO:0140516":null,"GO:1901098":null,"GO:1903259":null,"GO:1904595":null}}


id: GO:0099072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the the local concentration of neurotransmitter receptor at the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"}


id: PBO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 32","termid":"PBO:0072101"}


id: PBO:0073511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 4B","termid":"PBO:0073511"}


id: PBO:0050287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1 homeobox A","termid":"PBO:0050287"}


id: PBO:0003972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA/DNA helicase (predicted)","termid":"PBO:0003972"}


id: PBO:0045085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 3","termid":"PBO:0045085"}


id: PBO:0014590
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rrm-containing protein, isolated from a synthetic lethal Mutant with Nab2","termid":"PBO:0014590"}


id: PBO:0075144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C","termid":"PBO:0075144"}


id: PBO:0082535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; expression is downregulated at acidic pH and induced by cold shock and anaerobiosis; abundance is increased in cells cultured without shaking; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0082535"}


id: PBO:0074302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1 homolog B, structure-specific endonuclease subunit","termid":"PBO:0074302"}


id: PBO:0067972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 274","termid":"PBO:0067972"}


id: PBO:0075218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snurportin 1","termid":"PBO:0075218"}


id: PBO:0088465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation HECT-type ubiquitin-protein ligase E3 Ipa1","termid":"PBO:0088465"}


id: GO:1903465
data:
  {"annotated_genes":["SJAG_03048","SJAG_03160","SJAG_02074","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98174],"is_not":false,"summary":null,"term":"GO:1903465"},{"annotations":[108016,99142,113362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mtg_cell_cycle","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear cell cycle DNA replication","termid":"GO:0010571"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle DNA replication","termid":"GO:1903463"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"activation of DNA replication involved in S phase involved in mitotic cell cycle","type":"narrow"},{"name":"activation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"narrow"},{"name":"activation of mitotic cell cycle DNA replication","type":"narrow"},{"name":"activation of mitotic nuclear cell cycle DNA replication","type":"narrow"},{"name":"activation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"positive regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"positive regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"positive regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"up regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"up regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"up regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"up-regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"up-regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"upregulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"upregulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"upregulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903465","terms_by_termid":{"GO:1903465":null,"GO:1903468":null}}


id: PBO:0057819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3139","termid":"PBO:0057819"}


id: GO:0043061
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83335,89463],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during meiosis II chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["PMID:10809666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013","GO:0051179"],"is_obsolete":false,"name":"meiotic metaphase II chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043061","terms_by_termid":{"GO:0051456":null}}


id: PBO:0056959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20b","termid":"PBO:0056959"}


id: GO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the anatomical structures of a polarized epithelium are generated and organized. A polarized epithelium is an epithelium where the epithelial sheet is oriented with respect to the planar axis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of a polarized epithelium","synonyms":[{"name":"epithelial polarization","type":"exact"}],"termid":"GO:0001738"}


id: PBO:0048625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 1","termid":"PBO:0048625"}


id: PBO:0066883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 183","termid":"PBO:0066883"}


id: PBO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine accumulation causes a defect in purine biosynthesis","termid":"PBO:0001000"}


id: GO:0080191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of tissue from a secondary thickening meristem.","definition_xrefs":["PO:0025414","JSTOR:4354165","PO:0025004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral growth","termid":"GO:0080190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary thickening","termid":"GO:0080191"}


id: PBO:0078555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 43C, pseudogene","termid":"PBO:0078555"}


id: PBO:0082935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; functions with J-protein partner Zuo1p; may be involved in the folding of newly-synthesized polypeptide chains; member of the HSP70 family; SSB2 has a paralog, SSB1, that arose from the whole genome duplication","termid":"PBO:0082935"}


id: GO:0035261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the external genitalia are generated and organized. The external genitalia are the outer sex organs, such as the penis or vulva in mammals.","direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"external genitalia morphogenesis","termid":"GO:0035261"}


id: PBO:0084588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YDL038C was originally annotated as an independent ORF, but as a result of a sequence correction, was merged with adjacent ORF PRM7/YDL039C into a single open reading frame","termid":"PBO:0084588"}


id: PBO:0080629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 76","termid":"PBO:0080629"}


id: PBO:0052917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 17-1","termid":"PBO:0052917"}


id: PBO:0090834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane thiamine/proton high affinity transmembrane transporter Thi9","termid":"PBO:0090834"}


id: PBO:0076185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 1","termid":"PBO:0076185"}


id: PATO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's having an onset and time course between acute and chronic.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute","termid":"PATO:0002091"}


id: GO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of spore movement on or near host (obsolete GO:0075233)","termid":"GO:0075233"}


id: PBO:0077632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 4","termid":"PBO:0077632"}


id: PBO:0064495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit H","termid":"PBO:0064495"}


id: PBO:0074833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28B","termid":"PBO:0074833"}


id: PATO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001119 absolute momentum value (obsolete PATO:0001119)","termid":"PATO:0001119"}


id: GO:0009848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole-3-acetic acid that occurs through metabolism of L-tryptophan.","definition_xrefs":["GOC:lr","PMID:10375566","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"indoleacetic acid biosynthetic process","termid":"GO:0009684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"indoleacetic acid biosynthetic process via tryptophan","secondary_identifiers":["MetaCyc:PWY-581"],"synonyms":[{"name":"IAA biosynthetic process via tryptophan","type":"exact"},{"name":"indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"indoleacetic acid formation via tryptophan","type":"exact"},{"name":"indoleacetic acid synthesis via tryptophan","type":"exact"}],"termid":"GO:0009848"}


id: PR:000027845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dma1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dma1","synonyms":[{"name":"dma1","type":"exact"}],"termid":"PR:000027845"}


id: GO:2000740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of stem cell differentiation","termid":"GO:2000737"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal stem cell differentiation","termid":"GO:2000740"}


id: PBO:0083038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated","termid":"PBO:0083038"}


id: GO:0048575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change from vegetative to reproductive phase as a result of detection of, or exposure to, a period of light that falls short of the critical day length. The critical day length varies between species. Although the term is short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 minus the critical day length.","definition_xrefs":["GOC:jid","ISBN:0582015952","ISBN:0697037754","ISBN:0709408862","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-day photoperiodism","termid":"GO:0048572"},{"relation_name":"is_a","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-day photoperiodism, flowering","synonyms":[{"name":"long-night photoperiodism, flowering","type":"exact"},{"name":"response to long-night, flowering","type":"exact"},{"name":"response to short-day, flowering","type":"exact"},{"name":"short-day photoperiodic control of flowering","type":"exact"},{"name":"short-day photoperiodic control of flowering time","type":"exact"},{"name":"short-day photoperiodic control of inflorescence development","type":"exact"}],"termid":"GO:0048575"}


id: PBO:0064451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POF1B actin binding protein","termid":"PBO:0064451"}


id: PBO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 1","termid":"PBO:0042130"}


id: GO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of cell wall invaginations in a synergid cell, similar to those in transfer cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"filiform apparatus","termid":"GO:0043680"}


id: PBO:0051965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersectin 1","termid":"PBO:0051965"}


id: MOD:01471
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (Z)-dehydrobutyrine.","definition_xrefs":["RESID:AA0182","PubMed:1547888","DeltaMass:0","PubMed:3769923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"(Z)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01471"}


id: PBO:0055615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3054","termid":"PBO:0055615"}


id: PBO:0004413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1-Scd pathway protein Ral2","termid":"PBO:0004413"}


id: GO:0102273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionate + L-gamma-glutamyl-L-cysteinyl-beta-alaninate = gamma-Glu-Cys-gamma-Glu-Cys-beta-Ala + glycine.","definition_xrefs":["EC:2.3.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"homophytochelatin synthase (dimmer forming) activity","secondary_identifiers":["MetaCyc:RXN-12529"],"termid":"GO:0102273"}


id: GO:0060308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of GTP cyclohydrolase I. GTP cyclohydrolase I activity catalyzes the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"GTP cyclohydrolase I regulator activity","termid":"GO:0060308"}


id: PBO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan","termid":"PBO:0000075"}


id: GO:0043736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of alkylated DNA; recognizes and removes both N-3- and N-7-methyl purines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site.","definition_xrefs":["PMID:10375529"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA-3-methyladenine glycosylase IV activity (obsolete GO:0043736)","synonyms":[{"name":"DNA-3-methyladenine glycosylase IV activity","type":"exact"},{"name":"Mpg II","type":"narrow"},{"name":"MpgII","type":"narrow"}],"termid":"GO:0043736"}


id: FYPO:0000228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which sister chromatids do not move towards the spindle poles at the same time during mitosis, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Mitotic sister chromatid segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PMID:20211136","PomBase:mah","PMID:11809834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"lagging chromosomes","termid":"FYPO:0002090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"lagging mitotic chromosomes","synonyms":[{"name":"chromosome segregation defects, lagging mitotic chromosomes","type":"exact"},{"name":"lagging chromosomes during mitotic cell cycle","type":"related"},{"name":"lagging chromosomes during vegetative growth","type":"exact"},{"name":"lagging mitotic sister chromatids","type":"exact"}],"termid":"FYPO:0000228"}


id: GO:0097590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to the motion of one or more archaeal-type flagella. An archaeal-type flagellum (also called archaellum) is a non-membrane-bounded organelle superficially similar to a bacterial-type flagellum, but having a different molecular structure and lacking a central channel.","definition_xrefs":["GOC:cilia","GOC:krc","Wikipedia:Flagellum#Archaeal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"archaeal or bacterial-type flagellum-dependent cell motility","termid":"GO:0097588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"archaeal-type flagellum-dependent cell motility","synonyms":[{"name":"archaeal-type flagellar cell motility","type":"related"}],"termid":"GO:0097590"}


id: PBO:0033813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SMARCD1, SMARCD2 and SMARCD3 ortholog","termid":"PBO:0033813"}


id: PBO:0005451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase Ade6","termid":"PBO:0005451"}


id: RO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a colocalizes_with b if and only if  a is transiently or peripherally associated with b[GO].","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","termid":"RO:0002325"}


id: GO:0070867
data:
  {"annotated_genes":["SJAG_02924","SJAG_02351"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92055,106138],"is_not":false,"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a mating projection tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane of cell tip","termid":"GO:0031520"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02351":null,"SJAG_02924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"mating projection tip membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mating projection membrane fusion domain","type":"exact"},{"name":"shmoo tip membrane","type":"narrow"}],"termid":"GO:0070867","terms_by_termid":{"GO:0070867":null}}


id: PBO:0059902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 25","termid":"PBO:0059902"}


id: PBO:0011443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kelley-Seegmiller syndrome","termid":"PBO:0011443"}


id: GO:0097749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane organization process resulting in the formation of a tubular projection. This may face inwardly (as in tubular membrane invaginations) or outwardly (as in endosomal tubules).","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane tubulation","termid":"GO:0097749"}


id: GO:0048556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the microsporocyte. The microsporocyte is a diploid cell in which meiosis will occur, resulting in four microspores. A microspore is a spore that, in vascular plants, gives rise to a male gametophyte.","definition_xrefs":["ISBN:047186840X","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"microsporocyte nucleus","secondary_identifiers":["GO:0043074"],"synonyms":[{"name":"microspore mother cell nucleus","type":"exact"},{"name":"pollen mother cell nucleus","type":"exact"}],"termid":"GO:0048556"}


id: PBO:0052336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2013","termid":"PBO:0052336"}


id: PBO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Glc9 (predicted)","termid":"PBO:0001170"}


id: GO:0014841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of satellite cells, resulting in the expansion of the cell population. Satellite cells are quiescent cells that are located between the basal lamina and the plasmalemma of the muscle fiber, which are the main contributors to postnatal muscle growth. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","PMID:16607119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}


id: PBO:0089904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein, implicated in cellular detoxification","termid":"PBO:0089904"}


id: GO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast fate commitment","termid":"GO:0002051"}


id: GO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 4 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:curators","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 4 development","termid":"GO:0021570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}


id: GO:0015427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type efflux porter activity (obsolete GO:0015427)","synonyms":[{"name":"ABC-type efflux porter activity","type":"exact"}],"termid":"GO:0015427"}


id: PBO:0081091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 intronic transcript 1","termid":"PBO:0081091"}


id: MOD:00995
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to (81)Br-L-2'-bromophenylalanine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2'-bromophenylalanine","termid":"MOD:00183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(81)Br labeled 2'-bromophenylalanine","termid":"MOD:00995"}


id: GO:0018216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to an arginine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine methylation","secondary_identifiers":["GO:0018017"],"termid":"GO:0018216"}


id: GO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"glycerol ether catabolic process","synonyms":[{"name":"glycerol ether breakdown","type":"exact"},{"name":"glycerol ether catabolism","type":"exact"},{"name":"glycerol ether degradation","type":"exact"}],"termid":"GO:0044269"}


id: PBO:0085075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase; required for 'de novo' purine nucleotide biosynthesis; red pigment accumulates in mutant cells deprived of adenine; protein abundance increases in response to DNA replication stress","termid":"PBO:0085075"}


id: PBO:0027310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_5'_deoxyribonuclease_(pyrimidine_dimer)_activity","termid":"PBO:0027310"}


id: PBO:0030055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_adenylyl_cyclase_activity","termid":"PBO:0030055"}


id: GO:0019264
data:
  {"annotated_genes":["SJAG_03914","SJAG_01766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86829,90128],"is_not":false,"summary":null,"term":"GO:0019264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine from other compounds, including serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine biosynthetic process","termid":"GO:0006545"},{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"glycine biosynthetic process from serine","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYSYN-PWY"],"synonyms":[{"name":"glycine anabolism from serine","type":"exact"},{"name":"glycine formation from serine","type":"exact"},{"name":"glycine synthesis from serine","type":"exact"}],"termid":"GO:0019264","terms_by_termid":{"GO:0019264":null}}


id: PBO:0086614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086614"}


id: GO:0060505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells that contribute to the radial growth of a lung bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"},{"relation_name":"part_of","term_name":"bud dilation involved in lung branching","termid":"GO:0060503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in lung bud dilation","termid":"GO:0060505"}


id: PBO:0058504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5694","termid":"PBO:0058504"}


id: PBO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal fragment of Rec8 generated by separase-mediated cleavage is an endogenous substrate of the N-end rule pathway","termid":"PBO:0015687"}


id: GO:0035271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the ring gland over time, from its formation to a mature structure. The ring gland is a neuroendocrine organ found in higher Dipterans, which is composed of the prothoracic gland, the corpus allatum, and the corpora cardiacum. The ring gland is the site of production and release of ecdysteroids and juvenile hormones.","definition_xrefs":["PMID:11223816","PMID:9584098","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ring gland development","termid":"GO:0035271"}


id: FYPO:0001281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"normal protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0001281"}


id: PBO:0061829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-GlcNAcase","termid":"PBO:0061829"}


id: GO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the dorsal motor nucleus of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve structural organization","synonyms":[{"name":"dorsal motor nucleus of vagus nerve structural organisation","type":"exact"}],"termid":"GO:0035763"}


id: GO:1903497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 11-deoxycorticosterone stimulus.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000071","PMID:3585228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to 11-deoxycorticosterone","termid":"GO:1903496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 11-deoxycorticosterone","termid":"GO:1903497"}


id: GO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of BMP signaling pathway","termid":"GO:0030510"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"negatively_regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of BMP signaling pathway","secondary_identifiers":["GO:0090099"],"synonyms":[{"name":"down regulation of BMP signaling pathway","type":"exact"},{"name":"down-regulation of BMP signaling pathway","type":"exact"},{"name":"downregulation of BMP signaling pathway","type":"exact"},{"name":"inhibition of BMP signaling pathway","type":"narrow"},{"name":"negative regulation of BMP receptor signaling pathway","type":"related"},{"name":"negative regulation of BMP signalling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"negative regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030514"}


id: PBO:0054139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1505","termid":"PBO:0054139"}


id: PBO:0078894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 5-1","termid":"PBO:0078894"}


id: GO:1900982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen compound metabolic process","termid":"GO:0051173"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"positively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenazine biosynthetic process","synonyms":[{"name":"up regulation of azophenylene biosynthetic process","type":"related"},{"name":"activation of acridizine biosynthesis","type":"related"},{"name":"activation of acridizine biosynthetic process","type":"related"},{"name":"activation of azophenylene biosynthesis","type":"related"},{"name":"activation of azophenylene biosynthetic process","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"activation of dibenzopyrazine biosynthesis","type":"related"},{"name":"activation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"activation of phenazine biosynthetic process","type":"narrow"},{"name":"positive regulation of acridizine biosynthesis","type":"related"},{"name":"positive regulation of acridizine biosynthetic process","type":"related"},{"name":"positive regulation of azophenylene biosynthesis","type":"related"},{"name":"positive regulation of azophenylene biosynthetic process","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of acridizine biosynthesis","type":"related"},{"name":"up regulation of acridizine biosynthetic process","type":"related"},{"name":"up regulation of azophenylene biosynthesis","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of phenazine biosynthetic process","type":"exact"},{"name":"up-regulation of acridizine biosynthesis","type":"related"},{"name":"up-regulation of acridizine biosynthetic process","type":"related"},{"name":"up-regulation of azophenylene biosynthesis","type":"related"},{"name":"up-regulation of azophenylene biosynthetic process","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up-regulation of phenazine biosynthetic process","type":"exact"},{"name":"upregulation of acridizine biosynthesis","type":"related"},{"name":"upregulation of acridizine biosynthetic process","type":"related"},{"name":"upregulation of azophenylene biosynthesis","type":"related"},{"name":"upregulation of azophenylene biosynthetic process","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"upregulation of phenazine biosynthetic process","type":"exact"}],"termid":"GO:1900982"}


id: GO:0015863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of xanthosine, xanthine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"xanthosine transport","termid":"GO:0015863"}


id: PBO:0046105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 8","termid":"PBO:0046105"}


id: PBO:0072478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 7","termid":"PBO:0072478"}


id: GO:0080008
data:
  {"annotated_genes":["SJAG_03454","SJAG_03680","SJAG_04540","SJAG_03130","SJAG_00341","SJAG_01573","SJAG_01480","SJAG_04087","SJAG_02119","SJAG_01540","SJAG_03417","SJAG_00756","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83838,86393,86444,92377,92422,101188,107223],"is_not":false,"summary":null,"term":"GO:0080008"},{"annotations":[89981,110042,114894,92421,113778,106425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[107102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein.","definition_xrefs":["PMID:18552200","PMID:18223036","PMID:16792691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_01573":null,"SJAG_02119":null,"SJAG_03130":null,"SJAG_03417":null,"SJAG_03454":null,"SJAG_03680":null,"SJAG_04087":null,"SJAG_04540":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul4-RING E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0080008","terms_by_termid":{"GO:0031464":null,"GO:0043494":null,"GO:0080008":null}}


id: GO:0090635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The desmosomal part containing the desmosomal cadherins, desmogleins and desmocollins, that establish contact and adhere to neighboring cells in a Ca2+-dependent manner.","definition_xrefs":["PMID:20066089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"desmosome","termid":"GO:0030057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular core region of desmosome","synonyms":[{"name":"desmoglea","type":"exact"}],"termid":"GO:0090635"}


id: PBO:0060873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural EGFL like 1","termid":"PBO:0060873"}


id: PBO:0082855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)","termid":"PBO:0082855"}


id: GO:0090120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, from the lysosome to the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"lysosome to ER cholesterol transport","synonyms":[{"name":"lysosome to endoplasmic reticulum cholesterol transport","type":"exact"}],"termid":"GO:0090120"}


id: GO:0034505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts are deposited into calcareous tooth structures such as dental enamel, dentin and cementum.","definition_xrefs":["MSH:D014074","GOC:mah","MP:0002817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"},{"relation_name":"part_of","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth mineralization","synonyms":[{"name":"tooth calcification","type":"exact"}],"termid":"GO:0034505"}


id: PBO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 190","termid":"PBO:0042118"}


id: PBO:0062750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 2","termid":"PBO:0062750"}


id: PBO:0072427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 1","termid":"PBO:0072427"}


id: GO:0140666
data:
  {"annotated_genes":["SJAG_01643","SJAG_03682","SJAG_03832","SJAG_00871","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98993,108523,111996,109422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[103204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033592"}]},"cv_name":"molecular_function","definition":"An activity that facilitates the formation of a complementary double-stranded polynucleotide molecule.","definition_xrefs":["PMID:22888405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01643":null,"SJAG_03682":null,"SJAG_03780":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"annealing activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5686642","GO:0097617"],"synonyms":[{"name":"renaturation","type":"related"}],"termid":"GO:0140666","terms_by_termid":{"GO:0033592":null,"GO:1990814":null}}


id: PR:O13776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ftp105 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp5-interacting protein ftp105 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.16","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Hid-1 family protein ftp105 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ftp105","type":"exact"}],"termid":"PR:O13776"}


id: PBO:0029764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_double-strand_break_site","termid":"PBO:0029764"}


id: FYPO:0004345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at long terminal repeats is decreased.","definition_xrefs":["PMID:25002536","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at long terminal repeat","synonyms":[{"name":"decreased protein localisation to chromatin at long terminal repeat","type":"exact"},{"name":"decreased protein localization to chromatin at LTR","type":"exact"},{"name":"decreased protein localization to chromatin at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at long terminal repeat during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at long terminal repeat","type":"exact"}],"termid":"FYPO:0004345"}


id: PBO:0081391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF230 divergent transcript","termid":"PBO:0081391"}


id: PBO:0110302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0110302"}


id: GO:0042142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The strong but reversible binding of a heavy metal ion by a larger molecule such as protein.","definition_xrefs":["ISBN:0124325653","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal chelation (obsolete GO:0042142)","synonyms":[{"name":"heavy metal chelation","type":"exact"}],"termid":"GO:0042142"}


id: PBO:0066216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 12","termid":"PBO:0066216"}


id: PBO:0084802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; conserved among S. cerevisiae strains; extensively overlaps a Ty1 LTR; YER181C is not an essential gene","termid":"PBO:0084802"}


id: GO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a anaphylatoxin chemotactic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"C5a anaphylatoxin chemotactic receptor binding","synonyms":[{"name":"C5a anaphylatoxin chemotactic receptor ligand","type":"narrow"}],"termid":"GO:0031714"}


id: PBO:0047851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p22)","termid":"PBO:0047851"}


id: PBO:0031747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_centromeric_sister_chromatid_cohesion","termid":"PBO:0031747"}


id: GO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that plays a role in determining cell polarity by directing the localized assembly of actin filaments at polarization sites; in Saccharomyces the polarisome includes Bni1p, Spa2p, Pea2p, and Bud6p.","definition_xrefs":["PMID:14998522","PMID:9632790","PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"part_of","term_name":"site of polarized growth","termid":"GO:0030427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"polarisome","termid":"GO:0000133"}


id: PBO:0040183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asporin","termid":"PBO:0040183"}


id: GO:0140460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a Gram-negative bacterium.","definition_xrefs":["PMID:23664307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gram-negative bacterium","termid":"GO:0140460"}


id: FYPO:0000241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which any process that affects the physical integrity, replication, or segregation of genomic DNA is abnormal. Encompasses effects on DNA metabolism, chromosome organization, the spindle assembly checkpoint, and any DNA integrity checkpoint.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete genome stability defects (obsolete FYPO:0000241)","synonyms":[{"name":"genome stability defects during mitotic cell cycle","type":"related"},{"name":"genome stability defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000241"}


id: PBO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 2","termid":"PBO:0050879"}


id: GO:0000112
data:
  {"annotated_genes":["SJAG_03206","SJAG_00995","SJAG_00901","SJAG_00512","SJAG_03618"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85394,85776,87713,98961,108061],"is_not":false,"summary":null,"term":"GO:0000112"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. Note that Ssl2p is also called Rad25p).","definition_xrefs":["PMID:10915862","PMID:7813015","GOC:ew","PMID:14500720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00512":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_03206":null,"SJAG_03618":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nucleotide-excision repair factor 3 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NEF3 complex","type":"exact"}],"termid":"GO:0000112","terms_by_termid":{"GO:0000112":null}}


id: GO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become granulosa cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"granulosa cell differentiation","termid":"GO:0060014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell fate commitment","termid":"GO:0060015"}


id: GO:0047727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isobutyryl-CoA = butanoyl-CoA.","definition_xrefs":["EC:5.4.99.13","RHEA:13141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isobutyryl-CoA mutase activity","secondary_identifiers":["KEGG_REACTION:R01181","MetaCyc:ISOBUTYRYL-COA-MUTASE-RXN"],"synonyms":[{"name":"2-methylpropanoyl-CoA CoA-carbonylmutase activity","type":"related"},{"name":"butyryl-CoA:isobutyryl-CoA mutase activity","type":"related"},{"name":"isobutyryl coenzyme A mutase activity","type":"related"}],"termid":"GO:0047727"}


id: GO:0090295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:rb","PMID:19104072","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"catabolite repression","termid":"GO:0061984"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"nitrogen catabolite repression of transcription","synonyms":[{"name":"negative regulation of transcription by nitrogen catabolites","type":"exact"},{"name":"nitrogen catabolite repression","type":"exact"}],"termid":"GO:0090295"}


id: GO:1900240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of phenotypic switching","termid":"GO:1900239"},{"relation_name":"negatively_regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phenotypic switching","synonyms":[{"name":"down regulation of phenotypic dimorphism","type":"related"},{"name":"down regulation of phenotypic switching","type":"exact"},{"name":"down-regulation of phenotypic dimorphism","type":"related"},{"name":"down-regulation of phenotypic switching","type":"exact"},{"name":"downregulation of phenotypic dimorphism","type":"related"},{"name":"downregulation of phenotypic switching","type":"exact"},{"name":"inhibition of phenotypic dimorphism","type":"related"},{"name":"inhibition of phenotypic switching","type":"narrow"},{"name":"negative regulation of phenotypic dimorphism","type":"related"}],"termid":"GO:1900240"}


id: GO:0061055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the myotome over time, from its formation to the mature structure. The myotome is the portion of the somite that will give rise to muscle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotome development","termid":"GO:0061055"}


id: GO:2001228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to gamma radiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to gamma radiation","termid":"GO:0010332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to gamma radiation","synonyms":[{"name":"regulation of response to gamma ray","type":"related"},{"name":"regulation of response to gamma-ray photon","type":"related"}],"termid":"GO:2001228"}


id: PBO:0000999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine methyltransferase Met26","termid":"PBO:0000999"}


id: PBO:0072717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide/INSL5 receptor 4","termid":"PBO:0072717"}


id: PBO:0038705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin epsilon 1, pseudogene","termid":"PBO:0038705"}


id: FYPO:0006662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during G0 phase in which the nucleus is broken into multiple small fragments that are smaller than a normal nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology during G0","termid":"FYPO:0006667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented nucleus during G0","synonyms":[{"name":"degraded nucleus during cell quiescence","type":"related"},{"name":"fragmented nuclear DNA during G0","type":"related"},{"name":"fragmented nucleus during cell quiescence","type":"exact"},{"name":"fragmented nucleus during quiescence","type":"exact"},{"name":"loss of nuclear integrity during G0","type":"related"}],"termid":"FYPO:0006662"}


id: GO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenylcysteine metabolic process","termid":"GO:0030329"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine catabolic process","synonyms":[{"name":"prenylcysteine breakdown","type":"exact"},{"name":"prenylcysteine catabolism","type":"exact"},{"name":"prenylcysteine degradation","type":"exact"}],"termid":"GO:0030328"}


id: MOD:00406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Applied Biosystems original isotope-coded affinity tag d0 reagent.","definition_xrefs":["Unimod:13#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems original ICAT(TM) d0 modified cysteine","synonyms":[{"name":"Applied Biosystems original ICAT(TM) d0","type":"related"},{"name":"ICAT-D","type":"related"}],"termid":"MOD:00406"}


id: GO:0016122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"xanthophyll metabolic process","synonyms":[{"name":"xanthophyll metabolism","type":"exact"}],"termid":"GO:0016122"}


id: GO:0051672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the cell wall peptidoglycans of another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall peptidoglycan in other organism (obsolete GO:0051672)","synonyms":[{"name":"catabolic process of cell wall peptidoglycans of other organism","type":"exact"},{"name":"catabolism of cell wall peptidoglycans of other organism","type":"exact"},{"name":"cell wall catabolic process in other organism","type":"narrow"},{"name":"cell wall catabolism in other organism","type":"narrow"},{"name":"cell wall peptidoglycan catabolic process in another organism","type":"exact"}],"termid":"GO:0051672"}


id: SO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A start codon that is not the usual AUG sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"start_codon","termid":"SO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_start_codon","synonyms":[{"name":"non ATG start codon","type":"exact"},{"name":"non canonical start codon","type":"exact"},{"name":"non-canonical start codon","type":"exact"}],"termid":"SO:0000680"}


id: GO:0007638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of a mechanical stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory behavior","synonyms":[{"name":"behavioral response to mechanical stimulus","type":"exact"},{"name":"behavioural response to mechanical stimulus","type":"exact"},{"name":"mechanosensory behaviour","type":"exact"}],"termid":"GO:0007638"}


id: GO:0070060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin nucleation process in which actin monomers combine in the absence of any existing actin filaments; elongation of the actin oligomer formed by nucleation leads to the formation of an unbranched filament.","definition_xrefs":["GOC:mah","PMID:17477841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"'de novo' actin filament nucleation","synonyms":[{"name":"formin-mediated actin filament nucleation","type":"narrow"},{"name":"unbranched actin filament nucleation","type":"related"}],"termid":"GO:0070060"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["RHEA:54676","GOC:eab","PMID:29315936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: PBO:0087798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Syntaxin-like vacuolar t-SNARE; functions with Vam7p in vacuolar protein trafficking; mediates docking/fusion of late transport intermediates with the vacuole; has an acidic di-leucine sorting signal and C-terminal transmembrane region","termid":"PBO:0087798"}


id: GO:0070678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a preprotein, the unprocessed form of a protein destined to undergo co- or post-translational processing.","definition_xrefs":["GOC:imk","PMID:12914940","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"preprotein binding","synonyms":[{"name":"unprocessed protein binding","type":"exact"}],"termid":"GO:0070678"}


id: PBO:0011166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1/Yta4 (predicted)","termid":"PBO:0011166"}


id: PR:O74473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc11 gene.","definition_xrefs":["UniProtKB:O74473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation network scaffold protein cdc11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.11c","synonyms":[{"name":"SIN scaffold protein cdc11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc11","type":"exact"},{"name":"cell division control protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74473"}


id: PBO:0054726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2135","termid":"PBO:0054726"}


id: FYPO:0006527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of hydrolysis of peptide bonds within a protein is decreased. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification","termid":"FYPO:0002498"},{"relation_name":"is_a","term_name":"abnormal proteolysis","termid":"FYPO:0005376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased proteolysis","synonyms":[{"name":"decreased peptidolysis","type":"exact"},{"name":"decreased protein cleavage","type":"related"},{"name":"reduced proteolysis","type":"exact"}],"termid":"FYPO:0006527"}


id: PBO:0110426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 1","termid":"PBO:0110426"}


id: PBO:0091236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Con-6 family conserved fungal protein","termid":"PBO:0091236"}


id: GO:0098938
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The actin cytoskeleton that is part of a dendritic spine.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton of dendritic spine","termid":"GO:0098836"},{"relation_name":"is_a","term_name":"postsynaptic actin cytoskeleton","termid":"GO:0098871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin cytoskeleton of dendritic spine","termid":"GO:0098938"}


id: GO:0070999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of gravity in which a sensory mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of gravity","termid":"GO:0009590"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of gravity","termid":"GO:0070998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of gravity","termid":"GO:0070999"}


id: PBO:0050871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP(+)) 2","termid":"PBO:0050871"}


id: GO:1903135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cupric ion, copper(2+).","definition_xrefs":["GOC:bf","GO_REF:0000067","GOC:PARL","GOC:TermGenie","PMID:24567322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion binding","termid":"GO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"cupric ion binding","synonyms":[{"name":"Cu(2+) binding","type":"exact"},{"name":"Cu(II) binding","type":"exact"},{"name":"copper(2+)binding","type":"exact"}],"termid":"GO:1903135"}


id: GO:0045884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","GOC:go_curators","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of survival gene product expression (obsolete GO:0045884)","synonyms":[{"name":"regulation of survival gene product activity","type":"broad"},{"name":"regulation of survival gene product expression","type":"exact"},{"name":"regulation of survival gene products","type":"broad"}],"termid":"GO:0045884"}


id: PBO:0077441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176A","termid":"PBO:0077441"}


id: PR:Q9P7V8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphate carrier protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24089:SF22","OMA:SCHPO03484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphate carrier protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.13c","secondary_identifiers":["UniProtKB:Q9P7V8"],"synonyms":[{"name":"Spom972h-SLC25A3","type":"exact"}],"termid":"PR:Q9P7V8"}


id: FYPO:0006669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell mates with two partners, leading to the fusion of three cells. The resulting zygote can then undergo sporulation to form an ascus containing more than four spores.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mating between three cells","synonyms":[{"name":"abnormal conjugation between three cells","type":"exact"},{"name":"abnormal mating among three cells","type":"exact"}],"termid":"FYPO:0006669"}


id: GO:0050951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of temperature stimulus","synonyms":[{"name":"sensory perception of thermal stimulus","type":"exact"}],"termid":"GO:0050951"}


id: GO:0090543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part that is the central region of the midbody characterized by a gap in alpha-tubulin staining. It is a dense structure of antiparallel microtubules from the central spindle in the middle of the intercellular bridge.","definition_xrefs":["GOC:pm","PMID:22522702","PMID:18641129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"midbody","termid":"GO:0030496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Flemming body","synonyms":[{"name":"Midbody ring","type":"related"}],"termid":"GO:0090543"}


id: PBO:0006198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification","termid":"PBO:0006198"}


id: FYPO:0001897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"P-bodies present in decreased numbers","termid":"FYPO:0001898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"P-bodies present in decreased numbers during vegetative growth","synonyms":[{"name":"P bodies present in decreased numbers during vegetative growth","type":"exact"},{"name":"P-bodies present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"P-bodies present in reduced numbers during vegetative growth","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers during vegetative growth","type":"exact"},{"name":"decreased P-body formation during vegetative growth","type":"related"},{"name":"decreased P-body number during vegetative growth","type":"exact"},{"name":"decreased number of P-bodies present during vegetative growth","type":"related"},{"name":"fewer P-bodies present during vegetative growth","type":"exact"}],"termid":"FYPO:0001897"}


id: GO:0010638
data:
  {"annotated_genes":["SJAG_00883","SJAG_02433","SJAG_04502","SJAG_04312","SJAG_03936","SJAG_03048","SJAG_02990","SJAG_01805","SJAG_02332","SJAG_04435","SJAG_03137","SJAG_00266","SJAG_04573","SJAG_02169","SJAG_01837","SJAG_00082","SJAG_00666","SJAG_03681","SJAG_04259","SJAG_03353","SJAG_01679","SJAG_03438","SJAG_03581","SJAG_02336","SJAG_03126","SJAG_04968","SJAG_00145","SJAG_01297","SJAG_04597","SJAG_01212","SJAG_03624","SJAG_03812","SJAG_02451","SJAG_02498","SJAG_02380","SJAG_04776","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[95326,109830,104172,107939,86249,111981,110320,99733,103125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[89833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[93336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[68805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[64401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903373"},{"annotations":[94710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[98171,112767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[90823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045836"},{"annotations":[97641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[104804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[90047,85513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[106469,90048,109393,82991,90228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[98175,112769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"},{"annotations":[97904,107339,93412,110830,89438,98176,95884,110321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[90049,85516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[84557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[85019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"},{"annotations":[92891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[106208,93337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061191"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00145":null,"SJAG_00266":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01212":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02433":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02990":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03137":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03581":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03812":null,"SJAG_03936":null,"SJAG_04259":null,"SJAG_04312":null,"SJAG_04435":null,"SJAG_04502":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of organelle organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of organelle organisation","type":"exact"},{"name":"positive regulation of organelle organization and biogenesis","type":"related"}],"termid":"GO:0010638","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0031117":null,"GO:0031453":null,"GO:0032215":null,"GO:0045836":null,"GO:0045842":null,"GO:0061191":null,"GO:0090141":null,"GO:0110161":null,"GO:0140499":null,"GO:0140501":null,"GO:1901098":null,"GO:1902426":null,"GO:1902846":null,"GO:1903373":null,"GO:1903380":null,"GO:1903473":null,"GO:1903501":null,"GO:1903599":null,"GO:1905561":null}}


id: PBO:0051274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 5","termid":"PBO:0051274"}


id: PBO:0050882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI2 antisense RNA 1","termid":"PBO:0050882"}


id: GO:0031704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apelin receptor.","definition_xrefs":["GOC:mah","PMID:12787050","GOC:nln","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"apelin receptor binding","secondary_identifiers":["GO:0042569"],"synonyms":[{"name":"APJ receptor binding","type":"exact"},{"name":"apelin receptor ligand","type":"narrow"}],"termid":"GO:0031704"}


id: PBO:0047881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(5)(q15)","termid":"PBO:0047881"}


id: GO:0014711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"}


id: PBO:0081610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 534","termid":"PBO:0081610"}


id: PBO:0016931
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane AnChored protein","termid":"PBO:0016931"}


id: PR:Q92340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shu1 gene.","definition_xrefs":["UniProtKB:Q92340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C1F8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.02c","synonyms":[{"name":"Spom972h-shu1","type":"exact"}],"termid":"PR:Q92340"}


id: PBO:0071697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 3","termid":"PBO:0071697"}


id: PBO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)/OR22-1 (pseudogene)","termid":"PBO:0051477"}


id: PBO:0056076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6F","termid":"PBO:0056076"}


id: PBO:0078490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 9-1","termid":"PBO:0078490"}


id: PBO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E10","termid":"PBO:0075530"}


id: GO:1903375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an acoustico-facial VII-VIII ganglion complex over time, from its formation to the mature structure.","definition_xrefs":["PMID:18356247","GOC:bf","GOC:mat","GOC:PARL","GOC:TermGenie","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facioacoustic ganglion development","synonyms":[{"name":"acoustico-facial VII-VIII ganglion complex development","type":"exact"},{"name":"acousticofacial ganglion development","type":"exact"},{"name":"facio-acoustic VII-VIII ganglion complex development","type":"exact"},{"name":"facio-acoustic ganglion complex VII-VIII development","type":"exact"},{"name":"facio-acoustic ganglion development","type":"exact"}],"termid":"GO:1903375"}


id: FYPO:0007096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is decreased.","definition_xrefs":["PomBase:mah","PMID:31495586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin fusion focus","termid":"FYPO:0006503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to actin fusion focus","synonyms":[{"name":"decreased protein localisation to actin fusion focus","type":"exact"},{"name":"reduced protein localization to actin fusion focus","type":"exact"}],"termid":"FYPO:0007096"}


id: GO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism decreases the frequency, rate or extent of synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host synaptic transmission","termid":"GO:0044758"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation by symbiont of host synaptic transmission","termid":"GO:0044759"}


id: PBO:0014264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FUN14 family protein","termid":"PBO:0014264"}


id: PBO:0047184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 201 member B","termid":"PBO:0047184"}


id: PBO:0067457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 582, pseudogene","termid":"PBO:0067457"}


id: PBO:0030660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man9GlcNAc_level","termid":"PBO:0030660"}


id: FYPO:0007514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to manumycin A. Cells stop growing (and may die) at a concentration of manumycin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to manumycin A","synonyms":[{"name":"hypersensitive to manumycin A","type":"exact"},{"name":"sensitive to manu-A","type":"exact"},{"name":"sensitive to manumycin A during mitotic cell cycle","type":"related"},{"name":"sensitive to manumycin A during vegetative growth","type":"exact"}],"termid":"FYPO:0007514"}


id: PR:Q9HGK9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnp20 gene.","definition_xrefs":["UniProtKB:Q9HGK9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C800.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.13","synonyms":[{"name":"Spom972h-cnp20","type":"exact"}],"termid":"PR:Q9HGK9"}


id: GO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive T cell acquires the specialized features of an effector, regulatory, or memory T cell as part of an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell differentiation involved in immune response","synonyms":[{"name":"T cell development involved in immune response","type":"related"},{"name":"T cell differentiation during immune response","type":"related"},{"name":"T lymphocyte differentiation during immune response","type":"related"},{"name":"T-cell differentiation during immune response","type":"related"},{"name":"T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002292"}


id: FYPO:0009032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of bortezomib than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to bortezomib","synonyms":[{"name":"resistance to bortezomib during mitotic cell cycle","type":"related"},{"name":"resistance to bortezomib during vegetative growth","type":"exact"},{"name":"resistant to bortezomib","type":"exact"}],"termid":"FYPO:0009032"}


id: GO:0043871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delta1-piperideine-6-carboxylate + NAD+ + 2 H2O = 2-aminoadipate + NADH + H+. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["MetaCyc:RXN-8162","PMID:16237033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"delta1-piperideine-6-carboxylate dehydrogenase activity","secondary_identifiers":["RHEA:49476"],"synonyms":[{"name":"AmaB","type":"related"},{"name":"PIPOX","type":"related"}],"termid":"GO:0043871"}


id: PBO:0060718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A7","termid":"PBO:0060718"}


id: PBO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit d (predicted)","termid":"PBO:0002114"}


id: FYPO:0001934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing glycerol as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on glycerol carbon source","termid":"FYPO:0000684"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0002060","FYPO:0001985","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"abolished cell population growth on glycerol carbon source","synonyms":[{"name":"abolished glycerol utilization","type":"related"},{"name":"abolished growth on glycerol carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on glycerol carbon source","type":"exact"},{"name":"cell population growth on glycerol carbon source abolished","type":"exact"}],"termid":"FYPO:0001934"}


id: GO:0106040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of GABA-A receptor activity","termid":"GO:0106040"}


id: PBO:0087248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-threonine kinase and endoribonuclease; transmembrane protein that mediates the unfolded protein response (UPR) by regulating Hac1p synthesis through HAC1 mRNA splicing; role in homeostatic adaptation to ER stress; Kar2p binds inactive Ire1p and releases from it upon ER stress","termid":"PBO:0087248"}


id: PBO:0081379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 219","termid":"PBO:0081379"}


id: GO:0050026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-glycol + NAD(P)+ = a 2-hydroxycarbonyl compound + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.185","MetaCyc:L-GLYCOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-glycol dehydrogenase activity","synonyms":[{"name":"L-(+)-glycol:NAD(P) oxidoreductase activity","type":"related"},{"name":"L-glycol:NAD(P) dehydrogenase activity","type":"related"},{"name":"L-glycol:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"glycol (nicotinamide adenine dinucleotide (phosphate)) dehydrogenase activity","type":"related"}],"termid":"GO:0050026"}


id: PBO:0036259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase Ade3","termid":"PBO:0036259"}


id: PR:P05764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10442:SF0","PRO:DNx","OMA:SCHPO03124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.06","secondary_identifiers":["UniProtKB:P05764"],"synonyms":[{"name":"S28 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPS21","type":"exact"}],"termid":"PR:P05764"}


id: GO:0090231
data:
  {"annotated_genes":["SJAG_03681","SJAG_02169","SJAG_04259","SJAG_03126","SJAG_03353","SJAG_01679","SJAG_02336","SJAG_03327","SJAG_02451","SJAG_00883","SJAG_01837","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86249,111981,109830,107939,95326,110320,104172,103125,99733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[89833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[109835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[97119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"regulates","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090231","terms_by_termid":{"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0055025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle tissue development","termid":"GO:0045844"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue development","termid":"GO:0055024"},{"relation_name":"positively_regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle tissue development","synonyms":[{"name":"activation of cardiac muscle development","type":"narrow"},{"name":"positive regulation of heart muscle development","type":"exact"},{"name":"stimulation of cardiac muscle development","type":"narrow"},{"name":"up regulation of cardiac muscle development","type":"exact"},{"name":"up-regulation of cardiac muscle development","type":"exact"},{"name":"upregulation of cardiac muscle development","type":"exact"}],"termid":"GO:0055025"}


id: PBO:0045296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 48","termid":"PBO:0045296"}


id: PATO:0010000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in the bearer by virtue of the bearer consisting of a single, maximally connected structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maximally connected","termid":"PATO:0010000"}


id: GO:1905380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:bhm","GO_REF:0000058","GOC:TermGenie","PMID:10022900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"regulation of ncRNA transcription","termid":"GO:0140747"},{"relation_name":"regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355","GO:0016073"],"is_obsolete":false,"name":"regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905380"}


id: GO:2000478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric glomerular visceral epithelial cell development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of metanephric podocyte development","termid":"GO:2000477"},{"relation_name":"positively_regulates","term_name":"metanephric podocyte development","termid":"GO:0072249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric podocyte development","synonyms":[{"name":"positive regulation of metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:2000478"}


id: PBO:0030026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_agglutination","termid":"PBO:0030026"}


id: PBO:0053077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LBX2 antisense RNA 1","termid":"PBO:0053077"}


id: GO:1990441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","PMID:21113145","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990441)","synonyms":[{"name":"ER stress-induced negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"reduction of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"repression of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"suppression of transcription from RNA polymerase II promoter under ER stress","type":"exact"}],"termid":"GO:1990441"}


id: PBO:0085633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in GPI anchor synthesis; multimembrane-spanning protein that localizes to the endoplasmic reticulum; highly conserved among eukaryotes; GPI stands for glycosylphosphatidylinositol","termid":"PBO:0085633"}


id: PBO:0062901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase NAD binding domain containing 1","termid":"PBO:0062901"}


id: GO:0048837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sorocarp sorus over time, from its formation to the mature structure. A sorocarp sorus is the spore containing structure of a sorocarp.","definition_xrefs":["GOC:devbiol","GOC:mtg_sensu","PMID:4332228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"culmination involved in sorocarp development","termid":"GO:0031154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp sorus development","synonyms":[{"name":"sorocarp sorus formation","type":"exact"},{"name":"sorocarp spore head formation","type":"exact"},{"name":"sorocarp spore head morphogenesis","type":"related"}],"termid":"GO:0048837"}


id: PR:P33886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.07c","secondary_identifiers":["UniProtKB:P33886"],"synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom972h-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"}],"termid":"PR:P33886"}


id: GO:0007436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the larva, by which the anatomical structures of the salivary gland are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland morphogenesis","termid":"GO:0007436"}


id: PBO:0029987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation","termid":"PBO:0029987"}


id: PBO:0062006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily I member 1 pseudogene","termid":"PBO:0062006"}


id: FYPO:0005924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in centromere inner repeat regions is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level in chromatin","termid":"FYPO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased H2A.Z level at centromere inner repeat","synonyms":[{"name":"H2A.Z accumulation at centromere inner repeat","type":"exact"},{"name":"increased H2A.Z level at centromere imr during vegetative growth","type":"exact"},{"name":"increased H2A.Z level at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased H2A.Z level at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased H2A.Z level in chromatin at centromere inner repeat","type":"exact"}],"termid":"FYPO:0005924"}


id: PBO:0031622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_sporulation","termid":"PBO:0031622"}


id: GO:1904165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:rph","PMID:22541436"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of triglyceride homeostasis (obsolete GO:1904165)","synonyms":[{"name":"activation of triacylglycerol homeostasis","type":"narrow"},{"name":"activation of triglyceride homeostasis","type":"narrow"},{"name":"positive regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up regulation of triglyceride homeostasis","type":"exact"},{"name":"up-regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up-regulation of triglyceride homeostasis","type":"exact"},{"name":"upregulation of triacylglycerol homeostasis","type":"exact"},{"name":"upregulation of triglyceride homeostasis","type":"exact"}],"termid":"GO:1904165"}


id: PBO:0002575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3d Moe1","termid":"PBO:0002575"}


id: PBO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 35, NatC auxiliary subunit","termid":"PBO:0060410"}


id: FYPO:0006833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis  begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["GO:0031671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal onset of primary cell septum biogenesis","synonyms":[{"name":"normal onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"normal onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"normal onset of primary cell septum formation","type":"exact"},{"name":"normal onset of primary septum biogenesis","type":"exact"},{"name":"normal onset of primary septum synthesis","type":"related"},{"name":"normal timing of primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006833"}


id: GO:1903265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor-mediated signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:bf","PMID:23453807","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor-mediated signaling pathway","termid":"GO:0010803"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor-mediated signaling pathway","termid":"GO:0033209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"activation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"activation of adipocytokine signaling pathway","type":"related"},{"name":"activation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-mediated signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of adipocytokine signaling pathway","type":"related"},{"name":"positive regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"up regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"up regulation of adipocytokine signaling pathway","type":"related"},{"name":"up regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"up regulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"up-regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"up-regulation of adipocytokine signaling pathway","type":"related"},{"name":"up-regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"up-regulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"upregulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"upregulation of adipocytokine signaling pathway","type":"related"},{"name":"upregulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"upregulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:1903265"}


id: PBO:0064163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVA","termid":"PBO:0064163"}


id: PBO:0034636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_kinetochore_during_vegetative_growth","termid":"PBO:0034636"}


id: PBO:0083915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin; nucleates the formation of linear actin filaments; involved in processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables; activity is regulated by Hof1p and by the Bud14p-Kel1p-Kel2p complex; dephosphorylated and delocalized from the division site in a Glc7p/Ref2p-dependent manner; functionally redundant with BNI1","termid":"PBO:0083915"}


id: GO:1990314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin-like growth factor stimulus.","definition_xrefs":["PMID:20042609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to insulin-like growth factor stimulus","synonyms":[{"name":"cellular response to insulin-like growth factor","type":"exact"}],"termid":"GO:1990314"}


id: GO:0004558
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83085,83086,91797,91798],"is_not":false,"summary":null,"term":"GO:0004558"},{"annotations":[97387,97386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032450"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->4)-linked alpha-D-glucose residues with release of alpha-D-glucose.","definition_xrefs":["EC:3.2.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"alpha-1,4-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191108","GO:0016982","Reactome:R-HSA-5659861","GO:0004562","MetaCyc:MALTODEXGLUCOSID-RXN","Reactome:R-HSA-5659879","Reactome:R-HSA-5659899","Reactome:R-HSA-5659922","Reactome:R-HSA-191101","Reactome:R-HSA-189102","Reactome:R-HSA-189053","Reactome:R-HSA-191116"],"synonyms":[{"name":"acid maltase activity","type":"related"},{"name":"alpha-D-glucosidase activity","type":"related"},{"name":"alpha-D-glucoside glucohydrolase activity","type":"related"},{"name":"alpha-glucopyranosidase activity","type":"related"},{"name":"alpha-glucosidase II","type":"related"},{"name":"alpha-glucoside hydrolase activity","type":"related"},{"name":"glucoinvertase activity","type":"related"},{"name":"glucosidoinvertase activity","type":"related"},{"name":"glucosidosucrase activity","type":"related"},{"name":"lysosomal alpha-glucosidase activity","type":"broad"},{"name":"maltase-glucoamylase activity","type":"related"}],"termid":"GO:0004558","terms_by_termid":{"GO:0004558":null,"GO:0032450":null}}


id: GO:1900409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidative stress.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"positive regulation of response to oxidative stress","termid":"GO:1902884"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidative stress","synonyms":[{"name":"activation of adaptive response to oxidative stress","type":"narrow"},{"name":"activation of cellular response to oxidative stress","type":"narrow"},{"name":"positive regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up regulation of cellular response to oxidative stress","type":"exact"},{"name":"up-regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up-regulation of cellular response to oxidative stress","type":"exact"},{"name":"upregulation of adaptive response to oxidative stress","type":"narrow"},{"name":"upregulation of cellular response to oxidative stress","type":"exact"}],"termid":"GO:1900409"}


id: PBO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human INT6","termid":"PBO:0003394"}


id: GO:0043848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the incision of damaged DNA on the 3' side of a lesion, typically at the ninth phosphodiester bond 3' of the damage.","definition_xrefs":["PMID:11818552"],"gene_count":0,"genotype_count":0,"name":"obsolete excinuclease cho activity (obsolete GO:0043848)","synonyms":[{"name":"cho","type":"related"},{"name":"endonuclease cho","type":"exact"},{"name":"uvrc homolog protein","type":"related"}],"termid":"GO:0043848"}


id: FYPO:0003382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular acetate level","synonyms":[{"name":"increased acetate accumulation","type":"related"},{"name":"increased cellular acetate level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetate level during vegetative growth","type":"exact"}],"termid":"FYPO:0003382"}


id: GO:0090533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase dependent transmembrane transport complex","termid":"GO:0098533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cation-transporting ATPase complex","termid":"GO:0090533"}


id: GO:0043486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:15066277","GOC:jl","PMID:11735001"],"gene_count":0,"genotype_count":0,"name":"obsolete histone exchange (obsolete GO:0043486)","synonyms":[{"name":"histone chaperone","type":"related"},{"name":"histone replacement","type":"exact"}],"termid":"GO:0043486"}


id: FYPO:0002316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of squalene measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular squalene level","synonyms":[{"name":"normal cellular squalene accumulation","type":"related"},{"name":"normal cellular squalene level during mitotic cell cycle","type":"related"},{"name":"normal cellular squalene level during vegetative growth","type":"exact"}],"termid":"FYPO:0002316"}


id: PBO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) Hos2","termid":"PBO:0001914"}


id: GO:0006114
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409","SJAG_04264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89612,102379,109867],"is_not":false,"summary":null,"term":"GO:0006114"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol metabolic process","termid":"GO:0006071"},{"relation_name":"is_a","term_name":"alditol biosynthetic process","termid":"GO:0019401"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null,"SJAG_04264":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycerol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycerol anabolism","type":"exact"},{"name":"glycerol biosynthesis","type":"exact"},{"name":"glycerol formation","type":"exact"},{"name":"glycerol synthesis","type":"exact"}],"termid":"GO:0006114","terms_by_termid":{"GO:0006114":null}}


id: FYPO:0000905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein ubiquitination","termid":"FYPO:0006977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein ubiquitination during vegetative growth","synonyms":[{"name":"abnormal protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"abnormal protein ubiquitinylation during vegetative growth","type":"related"},{"name":"abnormal protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000905"}


id: FYPO:0001013
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115643,115648,115586,115650],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115413,115463,115470,115462,115412,115419,115587,115420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[115299,115294,115302,115290,115286,115287],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115558],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal. Cellular membrane organization results in the assembly, arrangement of constituent parts, or disassembly of a lipid bilayer membrane, such as the plasma membrane or an organelle membrane.","definition_xrefs":["PomBase:mah","GO:0061024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":16,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal membrane organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_01906","SJAG_05207","SJAG_01242","SJAG_03891","SJAG_03940","SJAG_04464","SJAG_03449","SJAG_02763","SJAG_01745","SJAG_03892"],"single_locus_genotype_uniquenames":["nem2delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","nup61delta","lem2delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","vps32delta","ned1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","man1delta","vps4delta","alx1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta"],"synonyms":[{"name":"abnormal cellular membrane organization","type":"exact"},{"name":"abnormal membrane organisation","type":"exact"}],"termid":"FYPO:0001013","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:1905028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane depolarization during AV node cell action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","GOC:TermGenie","PMID:19726871","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900826"},{"relation_name":"is_a","term_name":"regulation of membrane depolarization during AV node cell action potential","termid":"GO:1905027"},{"relation_name":"negatively_regulates","term_name":"membrane depolarization during AV node cell action potential","termid":"GO:0086045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane depolarization during AV node cell action potential","synonyms":[{"name":"down regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"down regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of membrane depolarization during AV node cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of membrane depolarization during AV node cell action potential","type":"narrow"},{"name":"inhibition of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905028"}


id: PBO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP95 divergent transcript","termid":"PBO:0042864"}


id: FYPO:0000576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of gene silencing is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene silencing","termid":"FYPO:0000574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased gene silencing","synonyms":[{"name":"decreased gene silencing during mitotic cell cycle","type":"related"},{"name":"decreased gene silencing during vegetative growth","type":"exact"},{"name":"reduced gene silencing","type":"exact"},{"name":"silencing: decreased","type":"related"}],"termid":"FYPO:0000576"}


id: PBO:0056199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA8 antisense RNA 1","termid":"PBO:0056199"}


id: GO:1901482
data:
  {"annotated_genes":["SJAG_03256","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98609,99675],"is_not":false,"summary":null,"term":"GO:1901482"}]},"cv_name":"biological_process","definition":"A L-lysine import into the vacuole that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane import into vacuole","termid":"GO:0090517"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-lysine import into vacuole involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901482","terms_by_termid":{"GO:1901482":null}}


id: FYPO:0004927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore formation assembly is normal (i.e. indistinguishable from wild type). In prospore formation, the nascent membrane forms at the meiotic outer plaque and grows until closure occurs and forespores, or prospores, are formed.","definition_xrefs":["GO:0032120","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal prospore membrane formation","synonyms":[{"name":"normal ascospore-type prospore membrane assembly","type":"exact"},{"name":"normal forespore membrane formation","type":"exact"}],"termid":"FYPO:0004927"}


id: GO:0080101
data:
  {"annotated_genes":["SJAG_00812"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105215],"is_not":false,"summary":null,"term":"GO:0080101"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidyl-N-dimethylethanolamine = S-adenosyl-L-homocysteine + phosphatidylcholine.","definition_xrefs":["EC:2.1.1.71","PMID:19366698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:32739","MetaCyc:RXN4FS-2","KEGG_REACTION:R01320"],"termid":"GO:0080101","terms_by_termid":{"GO:0080101":null}}


id: PBO:0060811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit V3","termid":"PBO:0060811"}


id: GO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicoid mRNA localization","synonyms":[{"name":"activation of bicoid mRNA localization","type":"narrow"},{"name":"positive regulation of bicoid mRNA localisation","type":"exact"},{"name":"stimulation of bicoid mRNA localization","type":"narrow"},{"name":"up regulation of bicoid mRNA localization","type":"exact"},{"name":"up-regulation of bicoid mRNA localization","type":"exact"},{"name":"upregulation of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045854"}


id: PBO:0083266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 75% of ORF overlaps the verified gene SFH1; deletion causes a vacuolar protein sorting defect and blocks anaerobic growth","termid":"PBO:0083266"}


id: GO:0043194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of the axon proximal to the neuronal cell body, at the level of the axon hillock. The action potentials that propagate along the axon are generated at the level of this initial segment.","definition_xrefs":["GOC:nln","GOC:sl","PMID:21551097","PMID:1754851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon initial segment","secondary_identifiers":["NIF_Subcellular:sao256000789"],"synonyms":[{"name":"initial segment","type":"exact"}],"termid":"GO:0043194"}


id: GO:0072334
data:
  {"annotated_genes":["SJAG_04162","SJAG_04697","SJAG_01177"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108359,111631],"is_not":false,"summary":null,"term":"GO:0072334"},{"annotations":[111630,83850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"}]},"cv_name":"biological_process","definition":"The process in which UDP-galactose is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01177":null,"SJAG_04162":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"UDP-galactose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015785"],"synonyms":[{"name":"UDP-galactose membrane transport","type":"exact"},{"name":"UDP-galactose transport","type":"related"}],"termid":"GO:0072334","terms_by_termid":{"GO:0072334":null,"GO:0097624":null}}


id: GO:0036474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to hydrogen peroxide (H2O2).","definition_xrefs":["GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to hydrogen peroxide (obsolete GO:0036474)","synonyms":[{"name":"cell death in response to H2O2","type":"exact"},{"name":"hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:0036474"}


id: PBO:0070834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 13","termid":"PBO:0070834"}


id: PBO:0109137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3039","termid":"PBO:0109137"}


id: PBO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2489","termid":"PBO:0055072"}


id: FYPO:0007965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which heterothallic haploid cells spontaneously form cells with diploid DNA content after failing chromosome segregation and  consequently nuclear division. The nucleus is displaced from the cell center by actin cables, preventing chromosome cut and leading to diploidisation.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased spontaneous diploidization","termid":"FYPO:0000252"},{"relation_name":"output_of","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased spontaneous diploidization due to abolished sister chromatid separation","secondary_identifiers":["PMID:33506191","PomBase:mlr"],"synonyms":[{"name":"escape from mitotic catastrophe","type":"broad"}],"termid":"FYPO:0007965"}


id: GO:0097033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex III (also known as cytochrome bc(1) complex or ubiquinol-cytochrome c reductase), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex III biogenesis (obsolete GO:0097033)","synonyms":[{"name":"mitochondrial cytochrome bc(1) complex biogenesis","type":"exact"}],"termid":"GO:0097033"}


id: GO:0042851
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-alanine metabolism","type":"exact"}],"termid":"GO:0042851","terms_by_termid":{"GO:0042853":null}}


id: PR:O14295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plr1 gene.","definition_xrefs":["UniProtKB:O14295","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.11","synonyms":[{"name":"PL reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PL-red (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-plr1","type":"exact"}],"termid":"PR:O14295"}


id: GO:0016104
data:
  {"annotated_genes":["SJAG_00624","SJAG_03360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66381,84219],"is_not":false,"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_03360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triterpenoid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"triterpene biosynthesis","type":"narrow"},{"name":"triterpene biosynthetic process","type":"narrow"},{"name":"triterpenoid anabolism","type":"exact"},{"name":"triterpenoid biosynthesis","type":"exact"},{"name":"triterpenoid formation","type":"exact"},{"name":"triterpenoid synthesis","type":"exact"}],"termid":"GO:0016104","terms_by_termid":{"GO:0016104":null}}


id: PBO:0088762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein NIFK","termid":"PBO:0088762"}


id: PR:Q10247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.19 gene.","definition_xrefs":["UniProtKB:Q10247","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4G9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.19","synonyms":[{"name":"Spom972h-SPAC4G9.19","type":"exact"}],"termid":"PR:Q10247"}


id: PBO:0057825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3144","termid":"PBO:0057825"}


id: PR:Q9P7X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13337:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.16","secondary_identifiers":["UniProtKB:Q9P7X0"],"synonyms":[{"name":"CybS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP23A10.16","type":"related"},{"name":"Spom972h-SDHD","type":"exact"},{"name":"succinate-ubiquinone reductase membrane anchor subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim18","type":"related"}],"termid":"PR:Q9P7X0"}


id: PBO:0082843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle protein; involved in vesicle formation and incorporation of specific secretory cargo; required for the delivery of bud-site selection protein Axl2p and Nha1p antiporter to cell surface; related to Drosophila cornichon; ERV14 has a paralog, ERV15, that arose from the whole genome duplication","termid":"PBO:0082843"}


id: GO:0018403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Dermatan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.","definition_xrefs":["RESID:AA0209","PMID:7338506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-dermatan sulfate linkage via dermatan 4-sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"protein-dermatan sulphate linkage via dermatan 4-sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"}],"termid":"GO:0018403"}


id: PBO:0060413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 50, NatE catalytic subunit","termid":"PBO:0060413"}


id: SO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 8th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["SO:KE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K8_acetylation_site","synonyms":[{"name":"H4K8 acetylation site","type":"exact"},{"name":"H4K8ac","type":"exact"}],"termid":"SO:0001731"}


id: PBO:0030080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import_during_nitrogen_starvation","termid":"PBO:0030080"}


id: GO:0003292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endocardial cushion cell becomes a cell of a cardiac septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"cardiac septum development","termid":"GO:0003279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac septum cell differentiation","termid":"GO:0003292"}


id: PBO:0070130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 44 pseudogene","termid":"PBO:0070130"}


id: GO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["GOC:add","ISBN:0121245462","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK5 cascade","termid":"GO:0070376"},{"relation_name":"negatively_regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERK5 cascade","synonyms":[{"name":"down regulation of BMK cascade","type":"exact"},{"name":"down-regulation of BMK cascade","type":"exact"},{"name":"downregulation of BMK cascade","type":"exact"},{"name":"inhibition of BMK cascade","type":"narrow"},{"name":"negative regulation of BMK cascade","type":"exact"},{"name":"negative regulation of BMK signaling pathway","type":"exact"},{"name":"negative regulation of BMK signalling pathway","type":"exact"},{"name":"negative regulation of BMK1 cascade","type":"exact"},{"name":"negative regulation of ERK5 signaling pathway","type":"exact"},{"name":"negative regulation of MAPK7 cascade","type":"exact"}],"termid":"GO:0070377"}


id: FYPO:0003055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is delayed at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:23117617","PMID:22582262","PomBase:mah","PMID:24173580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of homologous chromosome pairing","termid":"FYPO:0003026"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"delayed onset of homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"delayed homologous chromosome pairing at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"delayed onset of homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"delayed onset of homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"delayed onset of synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003055"}


id: PBO:0056914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC-induced long non-coding RNA","termid":"PBO:0056914"}


id: PBO:0017651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein involved in TOR signaling Bit2 (predicted)","termid":"PBO:0017651"}


id: MOD:01994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N1'-formyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-tryptophan","termid":"MOD:01106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N1'-formyl-L-tryptophan","synonyms":[{"name":"N1'FoTrp","type":"exact"}],"termid":"MOD:01994"}


id: PBO:0066258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 1","termid":"PBO:0066258"}


id: PBO:0063650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 7","termid":"PBO:0063650"}


id: PBO:0074025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 3","termid":"PBO:0074025"}


id: PBO:0038343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_on_by","termid":"PBO:0038343"}


id: PBO:0017075
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structures of acceptor stem and anticodon/intron loop of substrate tRNA crucial for RNaseP activity","termid":"PBO:0017075"}


id: PBO:0058551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6130","termid":"PBO:0058551"}


id: PBO:0030651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_nitrogen_starvation","termid":"PBO:0030651"}


id: PBO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 128","termid":"PBO:0075078"}


id: PBO:0052467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 13","termid":"PBO:0052467"}


id: PBO:0110479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lncRNA metabolic regulator 1","termid":"PBO:0110479"}


id: PR:P87293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16A10.01 gene.","definition_xrefs":["UniProtKB:P87293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized UPF0442 protein C16A10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.01","synonyms":[{"name":"Spom972h-SPAC16A10.01","type":"exact"}],"termid":"PR:P87293"}


id: PR:O94349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC61.05 gene.","definition_xrefs":["UniProtKB:O94349","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C61.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.05","synonyms":[{"name":"Spom972h-SPCC61.05","type":"exact"}],"termid":"PR:O94349"}


id: FYPO:0000583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000121"],"is_obsolete":false,"name":"abolished sporulation","synonyms":[{"name":"absent sporulation","type":"exact"},{"name":"ascospore formation abolished","type":"exact"},{"name":"sporulation abolished","type":"exact"},{"name":"sporulation: absent","type":"related"}],"termid":"FYPO:0000583"}


id: GO:0097452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. The complex binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs and suppresses their translation by blocking the recruitment of the 43S ribosomal complex to m7G cap-bound eIF4G. In humans it includes RPL13A, EPRS, SYNCRIP and GAPDH; mouse complexes lack SYNCRIP.","definition_xrefs":["PMID:15479637","GOC:br","PMID:23071094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GAIT complex","synonyms":[{"name":"IFN-gamma-activated inhibitor of translation complex","type":"exact"},{"name":"gamma interferon-activated inhibitor of translation complex","type":"exact"}],"termid":"GO:0097452"}


id: GO:0060834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a line that delineates the mouth and the anus of an embryo.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral/aboral axis specification","synonyms":[{"name":"oral/aboral axis determination","type":"related"}],"termid":"GO:0060834"}


id: PBO:0040342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f","termid":"PBO:0040342"}


id: PBO:0091359
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dpb4-interacting, RRM and IDR-containing factor","termid":"PBO:0091359"}


id: GO:1900634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentadecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane biosynthetic process","termid":"GO:0043447"},{"relation_name":"is_a","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadecane biosynthetic process","synonyms":[{"name":"pentadecane anabolism","type":"exact"},{"name":"pentadecane biosynthesis","type":"exact"},{"name":"pentadecane formation","type":"exact"},{"name":"pentadecane synthesis","type":"exact"}],"termid":"GO:1900634"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: PBO:0091996
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter located -692--679","termid":"PBO:0091996"}


id: GO:0018888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chloroacrylic acid, ClHC=CHCOOH, a chlorinated derivative of acrylic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-chloroacrylic acid metabolic process","secondary_identifiers":["UM-BBD_pathwayID:caa"],"synonyms":[{"name":"3-chloroacrylic acid metabolism","type":"exact"}],"termid":"GO:0018888"}


id: PBO:0073243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 2","termid":"PBO:0073243"}


id: PBO:0078075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation associated membrane protein 1 like 1","termid":"PBO:0078075"}


id: GO:0017157
data:
  {"annotated_genes":["SJAG_03374","SJAG_00661","SJAG_04509","SJAG_03754","SJAG_02366","SJAG_03763","SJAG_00430"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83368,87825,89480,94132,96629,96744],"is_not":false,"summary":null,"term":"GO:0017157"},{"annotations":[95927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00430":null,"SJAG_00661":null,"SJAG_02366":null,"SJAG_03374":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017157","terms_by_termid":{"GO:0017157":null,"GO:0045921":null}}


id: PBO:0081147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP69 zinc finger protein","termid":"PBO:0081147"}


id: FYPO:0005698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from the equatorial microtubule organizing center does not occur.","definition_xrefs":["PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cytoplasmic microtubules nucleated from eMTOC absent from cell","termid":"FYPO:0004619"},{"relation_name":"is_a","term_name":"abolished cytoplasmic microtubule nucleation","termid":"FYPO:0005693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"abolished microtubule nucleation from eMTOC","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation from eMTOC","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing centre","type":"exact"},{"name":"microtubule nucleation from eMTOC abolished","type":"exact"}],"termid":"FYPO:0005698"}


id: PBO:0090316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Esc1","termid":"PBO:0090316"}


id: GO:0072735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tert-butyl hydroperoxide (t-BOOH) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkyl hydroperoxide","termid":"GO:0033195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tert-butyl hydroperoxide","synonyms":[{"name":"response to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"response to t-BOOH","type":"exact"}],"termid":"GO:0072735"}


id: GO:0141143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts cell adhesion to the extracellular matrix in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22534208","PMID:30345086"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated disruption of host cell adhesion to extracellular matrix (obsolete GO:0141143)","synonyms":[{"name":"disruption by symbiont of host cell adhesion to extracellular matrix","type":"exact"}],"termid":"GO:0141143"}


id: MOD:01046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-chloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tyrosine","termid":"MOD:01028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-chloro-L-tyrosine","synonyms":[{"name":"3'-ClTyr","type":"exact"}],"termid":"MOD:01046"}


id: PBO:0088305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal and vacuolar ubiquitin-protein ligase E3/phosphatidylinositol(3)-phosphate binding protein Pib1","termid":"PBO:0088305"}


id: GO:0044396
data:
  {"annotated_genes":["SJAG_04982","SJAG_04644","SJAG_02511","SJAG_04887","SJAG_02177","SJAG_04465","SJAG_00649","SJAG_03146","SJAG_02075","SJAG_02228","SJAG_04052","SJAG_01732","SJAG_02245","SJAG_02700","SJAG_04001","SJAG_03119","SJAG_03088","SJAG_00521","SJAG_04886","SJAG_01964","SJAG_01894","SJAG_03086","SJAG_01268","SJAG_03044","SJAG_01384","SJAG_04100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83730,90957,93436,94570,94639,100990,101009],"is_not":false,"summary":null,"term":"GO:0044396"},{"annotations":[85334,103050,90446,107638,98873,106638,110944,95421,108148,108171,99131,101008,114940,114588,106970,93635,95608,99073,86198,83622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000147"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane in cells, at sites of endocytosis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00521":null,"SJAG_00649":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02177":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02511":null,"SJAG_02700":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03146":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04100":null,"SJAG_04465":null,"SJAG_04644":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin cortical patch organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin cortical patch organisation","type":"exact"}],"termid":"GO:0044396","terms_by_termid":{"GO:0000147":null,"GO:0044396":null}}


id: GO:1902652
data:
  {"annotated_genes":["SJAG_04499","SJAG_03531","SJAG_02855","SJAG_00502","SJAG_03929","SJAG_01307","SJAG_00158","SJAG_03352","SJAG_00717","SJAG_04790","SJAG_00370","SJAG_00580","SJAG_00624","SJAG_02068","SJAG_03750","SJAG_04810","SJAG_02104","SJAG_01474","SJAG_04018","SJAG_04270","SJAG_03349","SJAG_03024","SJAG_04049","SJAG_02719","SJAG_02044","SJAG_03509","SJAG_05311","SJAG_04865","SJAG_03715","SJAG_00453","SJAG_04362","SJAG_00770","SJAG_04059","SJAG_03249","SJAG_02982","SJAG_03598","SJAG_00413","SJAG_04217","SJAG_03235","SJAG_03018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83962,105171,107268,85163,94587,99835,102411,84253,103615,108530,95332,100108,111138,111298,88107,112632,90283,90081,87023,84189,100543,103752,103428,100303,99180,107781,88161,114962,92285,93760,105415,106025,84218,110963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[95523,92041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006102"},{"annotations":[89514],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[105789],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[105790],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[84049,84050,101713],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving secondary alcohol.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators","PMID:11288200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00502":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04362":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"secondary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"secondary alcohol metabolism","type":"exact"}],"termid":"GO:1902652","terms_by_termid":{"GO:0006102":null,"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: GO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal membrane transporter (obsolete GO:0005400)","synonyms":[{"name":"peroxisomal membrane transporter","type":"exact"}],"termid":"GO:0005400"}


id: PBO:0030513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_purvalanol_A","termid":"PBO:0030513"}


id: PBO:0084813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant has a respiratory growth defect and displays reduced peroxide-induced mitochondrial ROS; partially overlaps the verified gene MRPL51/YPR100W","termid":"PBO:0084813"}


id: PBO:0003808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP/GTP exchange factor, WD repeat protein Spo14","termid":"PBO:0003808"}


id: PR:Q9P376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II subunit A C-terminal domain phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23081:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A C-terminal domain phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.05c","secondary_identifiers":["UniProtKB:Q9P376"],"synonyms":[{"name":"CTD phosphatase fcp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19B12.05c","type":"related"},{"name":"Spom972h-CTDP1","type":"exact"}],"termid":"PR:Q9P376"}


id: GO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"},{"relation_name":"part_of","term_name":"glandular epithelial cell development","termid":"GO:0002068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell maturation","termid":"GO:0002071"}


id: PBO:0055153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2572","termid":"PBO:0055153"}


id: FYPO:0007076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes histone H3-K9 specific methyltransferase activity is altered. For example, preference for modified (e.g. ubiquitinated) H3 molecules may be enhanced or diminished.","definition_xrefs":["PMID:31468675","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"},{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0000652","FYPO:0000641","FYPO:0000707","FYPO:0000002","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"altered histone H3-K9 methyltransferase substrate specificity","synonyms":[{"name":"altered histone methyltransferase activity (H3-K9 specific) substrate specificity","type":"exact"}],"termid":"FYPO:0007076"}


id: PR:P87233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- phf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWM histone demethylase complex subunit phf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.07c","synonyms":[{"name":"PHD finger domain-containing protein phf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-phf1","type":"exact"}],"termid":"PR:P87233"}


id: GO:0007234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated in response to osmotic change, as mediated through a phosphorelay system. In S.cerevisiae, the osmosensor is the histidine kinase Sln1.","definition_xrefs":["PMID:26787842","PMID:9843501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"},{"relation_name":"is_a","term_name":"osmosensory signaling pathway","termid":"GO:0007231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"osmosensory signaling via phosphorelay pathway","synonyms":[{"name":"osmolarity sensing via two-component system","type":"exact"},{"name":"osmolarity signaling pathway via two-component system","type":"exact"},{"name":"osmolarity signalling pathway via two-component system","type":"exact"},{"name":"osmosensory signaling pathway via two-component system","type":"narrow"},{"name":"osmosensory signalling pathway via two-component system","type":"exact"},{"name":"signal transduction during osmotic stress via two-component system","type":"exact"}],"termid":"GO:0007234"}


id: PBO:0044139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 5","termid":"PBO:0044139"}


id: PBO:0066213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 6","termid":"PBO:0066213"}


id: PBO:0069114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 363, pseudogene","termid":"PBO:0069114"}


id: PBO:0056900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIER family member 2","termid":"PBO:0056900"}


id: PBO:0055663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 1","termid":"PBO:0055663"}


id: PATO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000666 energy_quantity (obsolete PATO:0000666)","termid":"PATO:0000666"}


id: PBO:0084142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity glucose transporter; member of the major facilitator superfamily, nearly identical to Hxt7p, expressed at high basal levels relative to other HXTs, repression of expression by high glucose requires SNF3; HXT6 has a paralog, HXT1, that arose from the whole genome duplication","termid":"PBO:0084142"}


id: GO:0001703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the mouth and the anus forms second.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming first","synonyms":[{"name":"protostomic gastrulation","type":"narrow"}],"termid":"GO:0001703"}


id: GO:0103072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acyl CoA = formyl-CoA + an odd numbered straight chain 2,3,4-saturated fatty aldehyde.","definition_xrefs":["EC:4.1.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"straight chain (R)-2-hydroxy fatty acyl-CoA lyase activity","secondary_identifiers":["MetaCyc:RXN66-475"],"termid":"GO:0103072"}


id: GO:0016895
data:
  {"annotated_genes":["SJAG_05280","SJAG_02818","SJAG_03734","SJAG_01173","SJAG_01648","SJAG_04410","SJAG_01163","SJAG_01832","SJAG_02908","SJAG_05373","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105038,101079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[88606,83877,92825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[111755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[84037,105897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[92828,103665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[84040,103251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[107556,92832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity","termid":"GO:0004529"},{"relation_name":"is_a","term_name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016796"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01163":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03734":null,"SJAG_04410":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0016787","GO:0016788","GO:0003824","GO:0004527"],"is_obsolete":false,"name":"DNA exonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008858","EC:3.1.11.-"],"synonyms":[{"name":"exodeoxyribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"exonuclease VIII activity","type":"narrow"}],"termid":"GO:0016895","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null}}


id: PATO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality denoting the lack of an entity.","definition_xrefs":["thefreedictionary.:thefreedictionary."],"direct_ancestors":[{"relation_name":"is_a","term_name":"amount","termid":"PATO:0000070"},{"relation_name":"reciprocal_of","term_name":"lacking processual parts","termid":"PATO:0001558"},{"relation_name":"reciprocal_of","term_name":"lacks all parts of type","termid":"PATO:0002000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent","secondary_identifiers":["PATO:0001996"],"synonyms":[{"name":"absence","type":"exact"},{"name":"absent from organism","type":"exact"}],"termid":"PATO:0000462"}


id: GO:0071799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin D stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"response to prostaglandin D","termid":"GO:0071798"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin D stimulus","termid":"GO:0071799"}


id: PBO:0062973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPC4 antisense RNA 1","termid":"PBO:0062973"}


id: PBO:0079669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2","termid":"PBO:0079669"}


id: SO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The C-terminal residues of a polypeptide which are exchanged for a GPI-anchor.","definition_xrefs":["EBI:rh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cleaved_for_gpi_anchor_region","synonyms":[{"name":"cleaved for gpi anchor region","type":"exact"}],"termid":"SO:0001408"}


id: GO:0035045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gradual disintegration of the sperm plasma membrane following insemination. This process is seen in Drosophila after entry of the entire sperm, surrounded by its plasma membrane, into the egg.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"sperm plasma membrane disassembly","synonyms":[{"name":"sperm plasma membrane breakdown","type":"exact"},{"name":"sperm plasma membrane catabolism","type":"exact"},{"name":"sperm plasma membrane degradation","type":"exact"}],"termid":"GO:0035045"}


id: GO:0034944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2,6-dimethyl-5-methylene-heptanoyl-CoA + NAD+ = 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA + NADH+ + H+.","definition_xrefs":["UM-BBD_reactionID:r0986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2,6-dimethyl-5-methylene-heptanoyl-CoA dehydrogenase activity","termid":"GO:0034944"}


id: GO:1902389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ceramide 1-phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:23863933","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ceramide 1-phosphate transport","termid":"GO:1902389"}


id: PBO:0079909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1","termid":"PBO:0079909"}


id: PBO:0038576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRAXAS1 pseudogene 1","termid":"PBO:0038576"}


id: PBO:0084063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein of the Ras superfamily; acts primarily on Sec4p, localizes to the bud site and bud tip; msb3 msb4 double mutation causes defects in secretion and actin organization; similar to the TBC-domain Tre2 oncogene; MSB4 has a paralog, MSB3, that arose from the whole genome duplication; human homolog USP6NL can complement yeast msb3 msb4 double null mutant","termid":"PBO:0084063"}


id: PBO:0074005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 6","termid":"PBO:0074005"}


id: GO:0098510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect high environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of high humidity","termid":"GO:0098510"}


id: PBO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin transmembrane transporter Pmd1","termid":"PBO:0018184"}


id: PBO:0057916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3619","termid":"PBO:0057916"}


id: GO:0047240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-(1->4)-beta-D-glucosyl-R + UDP-D-galactose = D-galactosyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-R + H+ + UDP.","definition_xrefs":["EC:2.4.1.179","RHEA:18413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"lactosylceramide beta-1,3-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04431","MetaCyc:2.4.1.179-RXN"],"synonyms":[{"name":"UDP-galactose:D-galactosyl-1,4-beta-D-glucosyl-R beta-1,3-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:D-galactosyl-1,4-beta-D-glucosyl-R beta-1,3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-lactosylceramide beta1->3-galactosyltransferase activity","type":"related"}],"termid":"GO:0047240"}


id: GO:0043038
data:
  {"annotated_genes":["SJAG_01159","SJAG_16456","SJAG_03071","SJAG_03585","SJAG_02206","SJAG_04031","SJAG_03277","SJAG_01197","SJAG_04840","SJAG_01259","SJAG_01235","SJAG_01522","SJAG_02721","SJAG_04856","SJAG_03545","SJAG_00103","SJAG_00420","SJAG_00243","SJAG_01797","SJAG_04482","SJAG_01577","SJAG_02615","SJAG_00443","SJAG_00488","SJAG_02015","SJAG_00653","SJAG_03626","SJAG_02236","SJAG_05560","SJAG_01352","SJAG_04473","SJAG_02263","SJAG_04409","SJAG_04094","SJAG_02428","SJAG_02977","SJAG_04762","SJAG_04285","SJAG_04738","SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043041"},{"annotations":[100914,98061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006421"},{"annotations":[110104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006422"},{"annotations":[91248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006423"},{"annotations":[89353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[100513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061475"},{"annotations":[105229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006425"},{"annotations":[92355,107251,114491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070681"},{"annotations":[85845,97243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006424"},{"annotations":[92706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006426"},{"annotations":[104289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006427"},{"annotations":[108635,112127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006428"},{"annotations":[90709,93808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006429"},{"annotations":[101219,111746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006430"},{"annotations":[101054,90913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006431"},{"annotations":[89354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[103110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[114142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[92707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[90313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[90115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070159"},{"annotations":[93000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[93385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"},{"annotations":[92915,114129,89259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006432"},{"annotations":[103005,101794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006433"},{"annotations":[91107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006434"},{"annotations":[103178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006435"},{"annotations":[91772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006418"},{"annotations":[91582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006436"},{"annotations":[111101,113484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006437"}]},"cv_name":"biological_process","definition":"The modification of an amino acid to an active form, for incorporation into a peptide, protein or other macromolecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic 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id: PBO:0040550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3","termid":"PBO:0040550"}


id: GO:0075296
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98083],"is_not":false,"summary":null,"term":"GO:0075296"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"positively_regulates","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0030437","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075296","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: PBO:0065097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit alpha","termid":"PBO:0065097"}


id: PBO:0061980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 1 pseudogene","termid":"PBO:0061980"}


id: PBO:0109294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in head and neck cancer 2","termid":"PBO:0109294"}


id: GO:0004638
data:
  {"annotated_genes":["SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110570],"is_not":false,"summary":null,"term":"GO:0004638"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + 2 H+ = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO2.","definition_xrefs":["RHEA:10792","EC:4.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:AIRCARBOXY-RXN","KEGG_REACTION:R04209","Reactome:R-HSA-73806"],"synonyms":[{"name":"1-(5-phosphoribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase [5-amino-1-(5-phospho-D-ribosyl)imidazole-forming]","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-ribosylimidazole 5-phosphate carboxylase activity","type":"related"},{"name":"5-phosphoribosyl-5-aminoimidazole carboxylase activity","type":"related"},{"name":"ADE2","type":"related"},{"name":"AIR carboxylase activity","type":"related"},{"name":"class II PurE","type":"related"}],"termid":"GO:0004638","terms_by_termid":{"GO:0004638":null}}


id: FYPO:0000687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000687"}


id: PBO:0066437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"resistin","termid":"PBO:0066437"}


id: GO:1904912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["GOC:BHF_telomere","PMID:26586433","GOC:rph","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"positively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of RNA localization to telomere","synonyms":[{"name":"activation of establishment of RNA localisation to telomere","type":"narrow"},{"name":"activation of establishment of RNA localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localization to telomere","type":"exact"}],"termid":"GO:1904912"}


id: GO:0047942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + ethylamine = N(5)-ethyl-L-glutamine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.1.6","RHEA:20525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"glutamate-ethylamine ligase activity","secondary_identifiers":["MetaCyc:RXN-12905","KEGG_REACTION:R02929"],"synonyms":[{"name":"L-glutamate:ethylamine ligase (ADP-forming)","type":"related"},{"name":"N(5)-ethyl-L-glutamine synthetase activity","type":"related"},{"name":"N5-ethyl-L-glutamine synthetase activity","type":"related"},{"name":"N5-ethylglutamine synthetase activity","type":"related"},{"name":"theanine synthetase activity","type":"related"}],"termid":"GO:0047942"}


id: GO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin C, the calcium-binding subunit of the troponin complex.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"troponin C binding","termid":"GO:0030172"}


id: PBO:0051887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITFG1 antisense RNA 1","termid":"PBO:0051887"}


id: PBO:0065425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 10","termid":"PBO:0065425"}


id: PBO:0061291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPAS2 antisense RNA 1","termid":"PBO:0061291"}


id: PR:Q9P7J6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1702 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.09","synonyms":[{"name":"Spom972h-rps1702","type":"exact"}],"termid":"PR:Q9P7J6"}


id: PBO:0090418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex kleisin subunit Rec8","termid":"PBO:0090418"}


id: PBO:0042528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 4 pseudogene 1","termid":"PBO:0042528"}


id: GO:0008838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-diaminopropionate + H2O = pyruvate + 2 NH3.","definition_xrefs":["EC:4.3.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diaminopropionate ammonia-lyase activity","secondary_identifiers":["RHEA:22084","MetaCyc:4.3.1.15-RXN"],"synonyms":[{"name":"2,3-diaminopropionate ammonia-lyase (adding H2O; pyruvate-forming)","type":"related"},{"name":"2,3-diaminopropionate ammonia-lyase activity","type":"related"},{"name":"alpha,beta-diaminopropionate ammonia-lyase activity","type":"related"},{"name":"diaminopropionatase activity","type":"related"}],"termid":"GO:0008838"}


id: GO:0004252
data:
  {"annotated_genes":["SJAG_05286","SJAG_02432","SJAG_00984","SJAG_03648","SJAG_04398","SJAG_04928","SJAG_03910","SJAG_03258","SJAG_03302","SJAG_04785","SJAG_00737","SJAG_03121","SJAG_01285","SJAG_01136","SJAG_02809","SJAG_03261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82936,84483,87142,88798,88891,89793,93355,97079,98886,99656,99662,100685,103996,105122,109445,114531],"is_not":false,"summary":null,"term":"GO:0004252"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"serine-type peptidase activity","termid":"GO:0008236"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_02432":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03302":null,"SJAG_03648":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"serine-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3788061","Reactome:R-HSA-9033520","Reactome:R-HSA-158942","Reactome:R-HSA-2022411","Reactome:R-HSA-1566979","Reactome:R-HSA-140664","Reactome:R-HSA-159771","Reactome:R-HSA-5578783","Reactome:R-HSA-6800198","Reactome:R-HSA-158766","Reactome:R-HSA-1604368","Reactome:R-HSA-400492","Reactome:R-HSA-8865276","Reactome:R-HSA-1592316","Reactome:R-HSA-114697","Reactome:R-HSA-1592270","Reactome:R-HSA-1602458","Reactome:R-HSA-976743","Reactome:R-HSA-186785","Reactome:R-HSA-2129357","Reactome:R-HSA-1454843","Reactome:R-HSA-9829200","Reactome:R-HSA-158925","Reactome:R-HSA-381500","Reactome:R-HSA-382061","Reactome:R-HSA-166792","Reactome:R-HSA-381446","Reactome:R-HSA-140700","Reactome:R-HSA-158311","Reactome:R-HSA-1592278","Reactome:R-HSA-1604763","Reactome:R-HSA-2172405","Reactome:R-HSA-1592362","Reactome:R-HSA-1604752","Reactome:R-HSA-9670874","Reactome:R-HSA-9686710","Reactome:R-HSA-400459","Reactome:R-HSA-158300","Reactome:R-HSA-9710106","Reactome:R-HSA-171288","Reactome:R-HSA-1604359","Reactome:R-HSA-1604732","Reactome:R-HSA-173745","Reactome:R-HSA-183122","Reactome:R-HSA-381466","Reactome:R-HSA-170844","Reactome:R-HSA-2514823","Reactome:R-HSA-381798","Reactome:R-HSA-5607002","Reactome:R-HSA-422021","Reactome:R-HSA-9033490","Reactome:R-HSA-9033530","Reactome:R-HSA-1602466","Reactome:R-HSA-163798","Reactome:R-HSA-9662786","Reactome:R-HSA-159796","Reactome:R-HSA-174551","Reactome:R-HSA-158137","Reactome:R-HSA-140823","Reactome:R-HSA-2168923","Reactome:R-HSA-166817","Reactome:R-HSA-381461","Reactome:R-HSA-8874145","Reactome:R-HSA-1592314","Reactome:R-HSA-1799329","Reactome:R-HSA-2471621","Reactome:R-HSA-159728","Reactome:R-HSA-139893","Reactome:R-HSA-9023196","Reactome:R-HSA-2534160","Reactome:R-HSA-2534260","Reactome:R-HSA-9829030","Reactome:R-HSA-5210935","Reactome:R-HSA-1604722","Reactome:R-HSA-9770187","Reactome:R-HSA-140696","Reactome:R-HSA-1604741","Reactome:R-HSA-173626","Reactome:R-HSA-3814820","Reactome:R-HSA-8849826","Reactome:R-HSA-9033515","EC:3.4.21.-","Reactome:R-HSA-140870","Reactome:R-HSA-9023627","Reactome:R-HSA-158333","Reactome:R-HSA-1604360","Reactome:R-HSA-1566962","Reactome:R-HSA-8874206","Reactome:R-HSA-977371","Reactome:R-HSA-1592436","Reactome:R-HSA-141026","Reactome:R-HSA-158164","Reactome:R-HSA-9668365","Reactome:R-HSA-9655046","Reactome:R-HSA-9023632","Reactome:R-HSA-159773","Reactome:R-HSA-9673223","Reactome:R-HSA-9710263","Reactome:R-HSA-8874186","Reactome:R-HSA-9694661","Reactome:R-HSA-158982","Reactome:R-HSA-5691512","Reactome:R-HSA-8874205","Reactome:R-HSA-8849857","Reactome:R-HSA-140736","Reactome:R-HSA-422051","Reactome:R-HSA-6800200","Reactome:R-HSA-1912369","Reactome:R-HSA-158747","Reactome:R-HSA-6800299","Reactome:R-HSA-2534206","Reactome:R-HSA-141040","Reactome:R-HSA-6801687","Reactome:R-HSA-9830805","Reactome:R-HSA-3928657","Reactome:R-HSA-381135","Reactome:R-HSA-158419","Reactome:R-HSA-163843","Reactome:R-HSA-158744","Reactome:R-HSA-173680","Reactome:R-HSA-8874204","Reactome:R-HSA-1592297","Reactome:R-HSA-5591040","Reactome:R-HSA-9694287","Reactome:R-HSA-1181152","Reactome:R-HSA-159868","Reactome:R-HSA-9033529","Reactome:R-HSA-140769","Reactome:R-HSA-9698988","Reactome:R-HSA-1602473","Reactome:R-HSA-173631","Reactome:R-HSA-8855825","Reactome:R-HSA-2214330","Reactome:R-HSA-1592371","Reactome:R-HSA-2482180","Reactome:R-HSA-8874212","Reactome:R-HSA-1912372","Reactome:R-HSA-6807224","Reactome:R-HSA-1604731","Reactome:R-HSA-1604690","Reactome:R-HSA-158750","Reactome:R-HSA-1474197","Reactome:R-HSA-1655842","Reactome:R-HSA-977615","Reactome:R-HSA-8852716","Reactome:R-HSA-265301","Reactome:R-HSA-3785684","Reactome:R-HSA-5210912","Reactome:R-HSA-1592398","Reactome:R-HSA-140599","Reactome:R-HSA-158313","Reactome:R-HSA-3266557","Reactome:R-HSA-9699007","Reactome:R-HSA-9686731","Reactome:R-HSA-400496","Reactome:R-HSA-183130","Reactome:R-HSA-8865275","Reactome:R-HSA-140840","Reactome:R-HSA-9668253","Reactome:R-HSA-9033524","Reactome:R-HSA-9666383","Reactome:R-HSA-9830882","Reactome:R-HSA-159733","Reactome:R-HSA-1604712","Reactome:R-HSA-2514772","Reactome:R-HSA-140777","Reactome:R-HSA-1602484","Reactome:R-HSA-1566981","Reactome:R-HSA-9023626","Reactome:R-HSA-1602488","Reactome:R-HSA-2471842","Reactome:R-HSA-9023178","Reactome:R-HSA-9769949","Reactome:R-HSA-166753","Reactome:R-HSA-9708859","Reactome:R-HSA-2168960","Reactome:R-HSA-8850831","Reactome:R-HSA-9023633","Reactome:R-HSA-187020","Reactome:R-HSA-9033506","Reactome:R-HSA-9653249"],"synonyms":[{"name":"blood coagulation factor activity","type":"related"},{"name":"serine elastase activity","type":"related"}],"termid":"GO:0004252","terms_by_termid":{"GO:0004252":null}}


id: GO:0008346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of a larval organism relating to the progression of that organism along the ground by the process of lifting and setting down each leg.","definition_xrefs":["GOC:pr","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"},{"relation_name":"is_a","term_name":"walking behavior","termid":"GO:0090659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval walking behavior","synonyms":[{"name":"larval walking behaviour","type":"exact"}],"termid":"GO:0008346"}


id: PBO:0047312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 1","termid":"PBO:0047312"}


id: GO:1901425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formic acid stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to formic acid","termid":"GO:1901425"}


id: GO:0047465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate.","definition_xrefs":["EC:5.1.3.9","MetaCyc:5.1.3.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acylglucosamine-6-phosphate 2-epimerase activity","secondary_identifiers":["RHEA:23932"],"synonyms":[{"name":"N-acetylglucosmamine 6-phosphate 2-epimerase activity","type":"related"},{"name":"N-acetylmannosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"N-acyl-D-glucosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"acylglucosamine phosphate 2-epimerase activity","type":"related"},{"name":"acylglucosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"acylmannosamine phosphate 2-epimerase activity","type":"related"}],"termid":"GO:0047465"}


id: GO:0061773
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin silencing complex that recruits histone-modifying enzymes and upregulates silencing of rDNA in response to glucose starvation.","definition_xrefs":["Intact:EBI-11790279","Intact:EBI-11789632","PMID:18485871","GOC:BHM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin silencing complex","termid":"GO:0005677"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005730","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"eNoSc complex","synonyms":[{"name":"energy dependent nucleolar silencing complex","type":"exact"}],"termid":"GO:0061773"}


id: PBO:0057920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622b","termid":"PBO:0057920"}


id: GO:0043267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"potassium ion transport","termid":"GO:0006813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of potassium ion transport","synonyms":[{"name":"down regulation of potassium ion transport","type":"exact"},{"name":"down-regulation of potassium ion transport","type":"exact"},{"name":"downregulation of potassium ion transport","type":"exact"},{"name":"inhibition of potassium ion transport","type":"narrow"},{"name":"negative regulation of K+ transport","type":"exact"},{"name":"negative regulation of potassium ion conductance","type":"narrow"},{"name":"negative regulation of potassium transport","type":"exact"},{"name":"regulation of K+ conductance","type":"narrow"},{"name":"regulation of potassium conductance","type":"narrow"},{"name":"transmembrane conductance regulator activity","type":"related"}],"termid":"GO:0043267"}


id: PBO:0089920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity Bmt2","termid":"PBO:0089920"}


id: PBO:0057479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 598","termid":"PBO:0057479"}


id: PBO:0045527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTW domain containing 2","termid":"PBO:0045527"}


id: PBO:0085399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein, component of eisosomes; long-lived protein that remains stable in eisosomes of mother cells while other eisosome proteins, Pil1p and Lsp1p, turn over; may function to anchor the eisosome in place; sporulation and plasma membrane sphingolipid content are altered in mutants; localizes to furrow-like invaginations (MCC patches)","termid":"PBO:0085399"}


id: FYECO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with phenylalanine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, phenylalanine nitrogen source","termid":"FYECO:0000296"}


id: GO:1905296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:15073157","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of neural crest formation","termid":"GO:0090301"},{"relation_name":"is_a","term_name":"negative regulation of neural crest cell differentiation","termid":"GO:1905293"},{"relation_name":"is_a","term_name":"regulation of neural crest cell fate specification","termid":"GO:1905295"},{"relation_name":"negatively_regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest cell fate specification","synonyms":[{"name":"down regulation of neural crest cell fate specification","type":"exact"},{"name":"down-regulation of neural crest cell fate specification","type":"exact"},{"name":"downregulation of neural crest cell fate specification","type":"exact"},{"name":"inhibition of neural crest cell fate specification","type":"narrow"}],"termid":"GO:1905296"}


id: PBO:0084557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane anchor subunit of succinate dehydrogenase (SDH); involved in coupling the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; has similarity to human SDH subunit D (SDHD), which is implicated in paraganglioma","termid":"PBO:0084557"}


id: PBO:0076949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFA intronic transcript 1","termid":"PBO:0076949"}


id: PBO:0028369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microsatellite_DNA_binding","termid":"PBO:0028369"}


id: PBO:0054932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2346","termid":"PBO:0054932"}


id: PBO:0036283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Arg82 (predicted)","termid":"PBO:0036283"}


id: PBO:0056887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 2","termid":"PBO:0056887"}


id: GO:0010371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"regulation of gibberellin biosynthetic process","synonyms":[{"name":"regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010371"}


id: GO:0070057
data:
  {"annotated_genes":["SJAG_00405","SJAG_03536","SJAG_04080"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98727,101135,114624],"is_not":false,"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane to which the spindle pole body (SPB) is anchored; the prospore membrane extends from the SPB attachment site to surround the spore nucleus.","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005628"}],"interesting_parent_ids":["GO:0005575","GO:0005628"],"is_obsolete":false,"name":"prospore membrane spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane SPB attachment site","type":"exact"},{"name":"forespore membrane spindle pole body attachment site","type":"exact"},{"name":"prospore membrane SPB attachment site","type":"exact"}],"termid":"GO:0070057","terms_by_termid":{"GO:0070057":null}}


id: PBO:0052999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 3","termid":"PBO:0052999"}


id: FYPO:0006841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the meiotic cell cycle (preceding meiosis I) is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of meiotic S phase","synonyms":[{"name":"delayed meiotic S phase progression","type":"related"},{"name":"increased duration of meiotic S phase progression","type":"exact"},{"name":"increased duration of premeiotic DNA replication","type":"related"},{"name":"prolonged meiotic S phase","type":"exact"},{"name":"prolonged premeiotic DNA replication","type":"related"}],"termid":"FYPO:0006841"}


id: PBO:0044484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP26C1 divergent transcript","termid":"PBO:0044484"}


id: GO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Proteins that associate with intermediate filaments and function in the supramolecular organization of cellular intermediate filament networks.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete intermediate filament associated protein (obsolete GO:0001721)","synonyms":[{"name":"IFAP","type":"exact"},{"name":"intermediate filament associated protein","type":"exact"}],"termid":"GO:0001721"}


id: PBO:0072422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 27","termid":"PBO:0072422"}


id: PBO:0051377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 4-1","termid":"PBO:0051377"}


id: PBO:0062811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 2","termid":"PBO:0062811"}


id: GO:0044389
data:
  {"annotated_genes":["SJAG_02253","SJAG_01686","SJAG_04573","SJAG_00615","SJAG_04335","SJAG_01134","SJAG_00803","SJAG_01226","SJAG_03643","SJAG_02591","SJAG_01540","SJAG_03575","SJAG_00452","SJAG_01365"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62858,72159,76979,78032,74640,70137,72753,65360,59128,77554,77439,67187,77645,78540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031625"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin-like protein ligase, such as ubiquitin-ligase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_00803":null,"SJAG_01134":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_01540":null,"SJAG_01686":null,"SJAG_02253":null,"SJAG_02591":null,"SJAG_03575":null,"SJAG_03643":null,"SJAG_04335":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-like protein ligase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"E3 protein ligase binding","type":"exact"},{"name":"small conjugating protein ligase binding","type":"exact"}],"termid":"GO:0044389","terms_by_termid":{"GO:0031625":null}}


id: GO:2001060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a D-glycero-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-glycero-D-manno-heptose 7-phosphate metabolic process","synonyms":[{"name":"D-glycero-D-manno-heptose 7-phosphate metabolism","type":"exact"}],"termid":"GO:2001060"}


id: GO:0032683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"negatively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045421"],"synonyms":[{"name":"down regulation of connective tissue growth factor production","type":"exact"},{"name":"down-regulation of connective tissue growth factor production","type":"exact"},{"name":"downregulation of connective tissue growth factor production","type":"exact"},{"name":"inhibition of connective tissue growth factor production","type":"narrow"},{"name":"negative regulation of CCN2 production","type":"exact"},{"name":"negative regulation of CTGF production","type":"exact"},{"name":"negative regulation of Fisp12 production","type":"exact"},{"name":"negative regulation of Hcs24 production","type":"exact"},{"name":"negative regulation of IGFBP8 production","type":"exact"},{"name":"negative regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032683"}


id: PBO:0056364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 1","termid":"PBO:0056364"}


id: PBO:0029350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_tRNA_level_during_vegetative_growth","termid":"PBO:0029350"}


id: PBO:0069586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 860, pseudogene","termid":"PBO:0069586"}


id: GO:0080188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A small RNA-based gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription. In general this process consists of three phases: biogenesis of siRNAs, scaffold RNA production, and the formation of the guiding complex that recruits de novo DNA methyltransferases to the target loci. Transposable elements are silenced by this mechanism.","definition_xrefs":["PMID:33031395","PMID:21420348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"},{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"gene silencing by RNA-directed DNA methylation","synonyms":[{"name":"RNA-directed DNA methylation","type":"related"},{"name":"RdDM","type":"exact"}],"termid":"GO:0080188"}


id: PBO:0058533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6078","termid":"PBO:0058533"}


id: PBO:0067997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 299","termid":"PBO:0067997"}


id: PATO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000497 relative rhythym value (obsolete PATO:0000497)","termid":"PATO:0000497"}


id: GO:2001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902987"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"negatively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"negative regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"negative regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001195"}


id: PBO:0075549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 1","termid":"PBO:0075549"}


id: GO:0019221
data:
  {"annotated_genes":["SJAG_02080"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033211"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a cytokine to a receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","PMID:19295629","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cytokine-mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"cytokine mediated signalling pathway","type":"exact"}],"termid":"GO:0019221","terms_by_termid":{"GO:0033211":null}}


id: FYPO:0002949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of substance in cell during G0","synonyms":[{"name":"increased accumulation of substance in cell during G0","type":"related"},{"name":"increased level of substance in cell during cell quiescence","type":"exact"},{"name":"increased level of substance in cell during quiescence","type":"exact"},{"name":"increased substance level during G0","type":"exact"}],"termid":"FYPO:0002949"}


id: PBO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 9, pseudogene","termid":"PBO:0080130"}


id: PBO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AM member 1 pseudogene","termid":"PBO:0061974"}


id: PBO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_3'-5'-exoribonuclease_activity","termid":"PBO:0030177"}


id: PBO:0058363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4735","termid":"PBO:0058363"}


id: GO:0006891
data:
  {"annotated_genes":["SJAG_01600","SJAG_02277","SJAG_02211","SJAG_04474","SJAG_02234","SJAG_03663","SJAG_04513","SJAG_01459","SJAG_00192","SJAG_04358","SJAG_03158","SJAG_01071","SJAG_05030","SJAG_04070","SJAG_00578","SJAG_04837","SJAG_01415","SJAG_04021","SJAG_03054","SJAG_02525","SJAG_00041","SJAG_02316","SJAG_04023","SJAG_02750","SJAG_00332","SJAG_00330","SJAG_04002","SJAG_03842","SJAG_03467","SJAG_00804","SJAG_02655","SJAG_01508","SJAG_04569"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84156,86697,90603,91982,93020,93460,94190,94284,94856,95503,96097,96868,98104,98327,99089,99199,99294,99962,100739,102024,103017,105501,105743,105764,107991,109802,112513,112987,113491],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[112933,105435,84457,86676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00192":null,"SJAG_00330":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_00804":null,"SJAG_01071":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_01508":null,"SJAG_01600":null,"SJAG_02211":null,"SJAG_02234":null,"SJAG_02277":null,"SJAG_02316":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_03842":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04358":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04569":null,"SJAG_04837":null,"SJAG_05030":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"intra-Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intra-Golgi transport","type":"exact"}],"termid":"GO:0006891","terms_by_termid":{"GO:0000301":null,"GO:0006891":null}}


id: MOD:01246
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00812 after formula correction. Remap to MOD:00812.","definition_xrefs":["PubMed:15189151","PubMed:3311742","PubMed:3578767","PubMed:11344537","Unimod:295#S"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01246 fucosylated -site S (obsolete MOD:01246)","synonyms":[{"name":"Fucose","type":"related"},{"name":"dHex","type":"related"}],"termid":"MOD:01246"}


id: PBO:0078519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 9","termid":"PBO:0078519"}


id: GO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A transcription coactivator activity that activates or increases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. A fourth class of coactivator activity is the bridging of a DNA-binding transcription factor to the general (basal) transcription machinery. The Mediator complex, which bridges sequence-specific DNA binding transcription factors and RNA polymerase, is also a transcription coactivator.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coactivator activity","termid":"GO:0003713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003712"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003713"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0140110","GO:0003712","GO:0060090","GO:0003674","GO:0003713","GO:0030674"],"is_obsolete":false,"name":"nuclear receptor coactivator activity","secondary_identifiers":["GO:0038049"],"synonyms":[{"name":"ligand-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"},{"name":"nuclear receptor transcription coactivator activity","type":"exact"},{"name":"transcription factor activity, ligand-activated RNA polymerase II transcription factor binding","type":"exact"}],"termid":"GO:0030374"}


id: PBO:0049657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 11","termid":"PBO:0049657"}


id: PBO:0073369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 2","termid":"PBO:0073369"}


id: PBO:0041004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC-1 related complex subunit 6","termid":"PBO:0041004"}


id: PBO:0029939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_elongated_germ_tubes_(obsolete_FYPO:0002298)","termid":"PBO:0029939"}


id: GO:1904050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:pad","GOC:TermGenie","PMID:22314364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"regulation of spontaneous neurotransmitter secretion","termid":"GO:1904048"},{"relation_name":"positively_regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"activation of spontaneous neurotransmitter secretion","type":"narrow"},{"name":"activation of stimulus-independent neurotransmitter secretion","type":"narrow"},{"name":"positive regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"up regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"up regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"up-regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"up-regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"upregulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"upregulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904050"}


id: GO:0055014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an atrial cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The atrium is the part of the heart that receives blood into the organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell differentiation","termid":"GO:0055011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell development","synonyms":[{"name":"atrial cardiomyocyte development","type":"exact"},{"name":"atrial heart muscle development","type":"exact"}],"termid":"GO:0055014"}


id: PBO:0078640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triple QxxK/R motif containing","termid":"PBO:0078640"}


id: GO:1901461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"negatively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to formic acid","synonyms":[{"name":"down regulation of response to formic acid","type":"exact"},{"name":"down-regulation of response to formic acid","type":"exact"},{"name":"downregulation of response to formic acid","type":"exact"},{"name":"inhibition of response to formic acid","type":"narrow"}],"termid":"GO:1901461"}


id: PR:Q9Y807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC146.02 gene.","definition_xrefs":["UniProtKB:Q9Y807","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C146.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.02","synonyms":[{"name":"Spom972h-SPBC146.02","type":"exact"}],"termid":"PR:Q9Y807"}


id: PBO:0057528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 645","termid":"PBO:0057528"}


id: PBO:0029224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_homologous_chromosome_pairing","termid":"PBO:0029224"}


id: FYPO:0006657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which acid phosphatase activity is absent during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished acid phosphatase activity","termid":"FYPO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished acid phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"acid phosphatase activity abolished during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006657"}


id: GO:0030894
data:
  {"annotated_genes":["SJAG_05353","SJAG_05105","SJAG_06642","SJAG_02818","SJAG_05197","SJAG_05239","SJAG_03855","SJAG_00272","SJAG_02182","SJAG_04877","SJAG_01698","SJAG_06597","SJAG_04150","SJAG_03898","SJAG_05173","SJAG_03722","SJAG_04994","SJAG_01010","SJAG_00729","SJAG_00863","SJAG_02627","SJAG_00814","SJAG_03780","SJAG_02172"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88290,88291,88292,88293,88294,88327,88328,88329,88330,91694,108939,108940,108941,108942,108943],"is_not":false,"summary":null,"term":"GO:0030894"},{"annotations":[101174,95159,113419,93130],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[98631,100769,90903,105030],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[112336,107510,111582],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[89592,90936,108254,108824,102870,85072],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[108504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043601"}]},"cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the replication fork which mediates DNA replication. Includes DNA primase, one or more DNA polymerases, DNA helicases, and other proteins.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"replication fork","termid":"GO:0005657"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01698":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04877":null,"SJAG_04994":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05353":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"replisome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Replisome"],"synonyms":[{"name":"DNA synthesome complex","type":"related"},{"name":"RC complex","type":"related"},{"name":"replication-competent complex","type":"related"}],"termid":"GO:0030894","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0030894":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: PBO:0070462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 5","termid":"PBO:0070462"}


id: PBO:0059539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site Y","termid":"PBO:0059539"}


id: FYPO:0006280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of crossover formation as part of mitotic recombination is increased in centromeric regions.","definition_xrefs":["PMID:28977643","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased mitotic recombination with crossover formation at centromere","termid":"FYPO:0006280"}


id: GO:0010407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cell wall arabinogalactan II glycoprotein where other amino acids besides Hyp, Ala, Ser, Thr and Gly can be present and grouped into regions, such as a Cys-rich or Asn-rich domains.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinogalactan protein metabolic process","termid":"GO:0010405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"non-classical arabinogalactan protein metabolic process","synonyms":[{"name":"non-classical arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010407"}


id: PBO:0032717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaphase-promoting_complex_assembly","termid":"PBO:0032717"}


id: GO:0010234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a tapetal cell of anthers in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"anther wall tapetum cell differentiation","termid":"GO:0048657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum cell fate specification","synonyms":[{"name":"tapetal cell fate specification","type":"broad"}],"termid":"GO:0010234"}


id: PBO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane translocase Oxa102","termid":"PBO:0004241"}


id: GO:0017183
data:
  {"annotated_genes":["SJAG_00251","SJAG_00235","SJAG_04085","SJAG_04544","SJAG_04846","SJAG_02467","SJAG_01418","SJAG_01058"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96333,96486,101095,105647,107116,111795,113544,114863],"is_not":false,"summary":null,"term":"GO:0017183"}]},"cv_name":"biological_process","definition":"The modification of peptidyl-histidine to 2'-(3-carboxamido-3-(trimethylammonio)propyl)-L-histidine, known as diphthamide, found in translation elongation factor EF-2. The process occurs in eukaryotes and archaea but not eubacteria.","definition_xrefs":["GOC:pde","PMID:20559380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00251":null,"SJAG_01058":null,"SJAG_01418":null,"SJAG_02467":null,"SJAG_04085":null,"SJAG_04544":null,"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein histidyl modification to diphthamide","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RESID:AA0040"],"synonyms":[{"name":"peptidyl-diphthamide anabolism from peptidyl-histidine","type":"exact"},{"name":"peptidyl-diphthamide biosynthetic process from peptidyl-histidine","type":"exact"},{"name":"peptidyl-diphthamide formation from peptidyl-histidine","type":"exact"},{"name":"peptidyl-diphthamide synthesis from peptidyl-histidine","type":"exact"}],"termid":"GO:0017183","terms_by_termid":{"GO:0017183":null}}


id: GO:0036020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endolysosome. An endolysosome is a transient hybrid organelle formed by fusion of a late endosome with a lysosome.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"endolysosome","termid":"GO:0036019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005773","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"endolysosome membrane","synonyms":[{"name":"endolysosomal membrane","type":"exact"}],"termid":"GO:0036020"}


id: FYPO:0004628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of premeiotic DNA replication","synonyms":[{"name":"delayed premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0004628"}


id: SO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase II binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_promoter","synonyms":[{"name":"RNA polymerase B promoter","type":"exact"},{"name":"RNApol II promoter","type":"exact"},{"name":"pol II promoter","type":"related"},{"name":"polymerase II promoter","type":"exact"}],"termid":"SO:0000170"}


id: PBO:0082948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic malate dehydrogenase; one of three isozymes that catalyze interconversion of malate and oxaloacetate; involved in the glyoxylate cycle and gluconeogenesis during growth on two-carbon compounds; interacts with Pck1p and Fbp1; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0082948"}


id: PBO:0085939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mtc6 is synthetically sick with cdc13-1; SWAT-GFP and mCherry fusion proteins localize to the vacuole while SWAT-GFP fusion also localizes to the endoplasmic reticulum","termid":"PBO:0085939"}


id: PBO:0044045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 2","termid":"PBO:0044045"}


id: GO:0016339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","synonyms":[{"name":"calcium-dependent cell adhesion molecule activity","type":"related"}],"termid":"GO:0016339"}


id: FYPO:0001820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing lithium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on lithium","synonyms":[{"name":"normal cell population growth in presence of lithium ions","type":"exact"},{"name":"normal cell population growth on lithium","type":"exact"},{"name":"normal cell population growth on lithium ion","type":"exact"},{"name":"normal cellular response to lithium ion","type":"related"},{"name":"normal growth on lithium ion","type":"exact"},{"name":"normal vegetative cell population growth on lithium ion","type":"exact"}],"termid":"FYPO:0001820"}


id: PBO:0064713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 49","termid":"PBO:0064713"}


id: PBO:0081832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 766","termid":"PBO:0081832"}


id: FYPO:0009027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing phenylalanine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth on phenylalanine nitrogen source","synonyms":[{"name":"increased growth on phenylalanine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on phenylalanine nitrogen source","type":"exact"}],"termid":"FYPO:0009027"}


id: SO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon encoding a rare amino acid is changed, resulting in a different encoded amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_conservative_missense_variant","termid":"SO:0001586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare_amino_acid_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:rare_amino_acid_variant","type":"exact"},{"name":"rare amino acid variant","type":"exact"},{"name":"snpEff:RARE_AMINO_ACID","type":"exact"}],"termid":"SO:0002008"}


id: GO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,4'-disulfate.","definition_xrefs":["EC:2.8.2.27","RHEA:17205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"quercetin-3-sulfate 4'-sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.27-RXN","KEGG_REACTION:R02633"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"flavonol 4'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 4'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047366"}


id: GO:0014072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isoquinoline alkaloid","termid":"GO:0014072"}


id: FYPO:0002194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a larger volume than normal and spheroid shape, and contain one or more septa each. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen septated spheroid cells (obsolete FYPO:0002194)","synonyms":[{"name":"inviable microcolony, enlarged septated spheroid vegetative cells","type":"related"},{"name":"inviable microcolony, septated large spheroid vegetative cells","type":"related"},{"name":"inviable microcolony, septated, spheroid vegetative cells with increased cell size","type":"related"},{"name":"inviable microcolony, septated, spheroid vegetative cells with increased cell volume","type":"exact"},{"name":"inviable microcolony, swollen septated rounded cells","type":"exact"},{"name":"inviable microcolony, swollen septated spheroid vegetative cells","type":"exact"}],"termid":"FYPO:0002194"}


id: PBO:0042716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal AT-AC splicing factor","termid":"PBO:0042716"}


id: PBO:0048900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 24","termid":"PBO:0048900"}


id: PBO:0064623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrophosphatase (inorganic) 1 pseudogene","termid":"PBO:0064623"}


id: FYPO:0008162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the incidence of mitotic cell cycle arrest or delay due to regulation by the mitotic S-phase DNA damage checkpoint is greater than in wild type under any specified set of conditions.","definition_xrefs":["PMID:18344406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"increased mitotic DNA damage checkpoint activation","termid":"FYPO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"increased activation of S-phase DNA damage checkpoint","termid":"FYPO:0008162"}


