# terms

id: PBO:0053388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 315","termid":"PBO:0053388"}


id: PBO:0056982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30b","termid":"PBO:0056982"}


id: GO:0097123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A1 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin A1-CDK2 complex","termid":"GO:0097123"}


id: FYPO:0006065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring disassembly begins later than normal.","definition_xrefs":["PomBase:mah","PMID:15385632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring disassembly during vegetative growth","termid":"FYPO:0006064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of septin ring disassembly during vegetative growth","synonyms":[{"name":"delayed onset of septin ring disassembly during mitotic cell cycle","type":"related"},{"name":"delayed septin ring disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006065"}


id: GO:0030267
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96812,100931],"is_not":false,"summary":null,"term":"GO:0030267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycolate + NADP+ = glyoxylate + NADPH + H+.","definition_xrefs":["RHEA:10992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyoxylate reductase activity","termid":"GO:0106345"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyoxylate reductase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.1.79","Reactome:R-HSA-389826","MetaCyc:GLYOXYLATE-REDUCTASE-NADP+-RXN","Wikipedia:Glyoxylate_reductase_(NADP+)"],"synonyms":[{"name":"NADPH-glyoxylate reductase activity","type":"related"},{"name":"glycolate:NADP+ oxidoreductase activity","type":"related"},{"name":"glyoxylate reductase (NADP+)","type":"related"}],"termid":"GO:0030267","terms_by_termid":{"GO:0030267":null}}


id: GO:0033337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal fin development","termid":"GO:0033337"}


id: GO:0005924
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An adherens junction which connects a cell to the extracellular matrix.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-substrate adherens junction (obsolete GO:0005924)","synonyms":[{"name":"hemi-adherens junction","type":"related"}],"termid":"GO:0005924"}


id: GO:1903182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of SUMO ligase activity.","definition_xrefs":["GOC:bf","GO_REF:0000059","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of SUMO transferase activity","synonyms":[{"name":"regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"regulation of SUMO conjugating enzyme activity","type":"exact"}],"termid":"GO:1903182"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: GO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of an imaginal disc-derived wing.","definition_xrefs":["PMID:21393605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}


id: PBO:0029198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation","termid":"PBO:0029198"}


id: PBO:0045187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B6","termid":"PBO:0045187"}


id: GO:0039686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral DNA replication process where replication occurs in both directions from the starting point. This creates two replication forks, moving in opposite directions.","definition_xrefs":["GOC:jl","VZ:1939","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"bidirectional double-stranded viral DNA replication","synonyms":[{"name":"viral bidirectional dsDNA replication","type":"exact"}],"termid":"GO:0039686"}


id: PBO:0061268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA1 divergent transcript","termid":"PBO:0061268"}


id: PBO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt5","termid":"PBO:0001715"}


id: PBO:0067673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 854, pseudogene","termid":"PBO:0067673"}


id: PBO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-associated cyclin-dependent protein kinase Lsk1","termid":"PBO:0002304"}


id: MOD:01886
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an sulfanyl or substituted sulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiolated residue","termid":"MOD:01886"}


id: MOD:00849
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a potassium atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium containing modified residue","synonyms":[{"name":"KRes","type":"exact"}],"termid":"MOD:00849"}


id: GO:0052116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in host environment (obsolete GO:0052116)","synonyms":[{"name":"chemotaxis in response to host environment","type":"exact"}],"termid":"GO:0052116"}


id: GO:1904302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1849751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of maternal process involved in parturition","termid":"GO:1904301"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of maternal process involved in parturition","synonyms":[{"name":"down regulation of maternal process involved in parturition","type":"exact"},{"name":"down-regulation of maternal process involved in parturition","type":"exact"},{"name":"downregulation of maternal process involved in parturition","type":"exact"},{"name":"inhibition of maternal process involved in parturition","type":"narrow"}],"termid":"GO:1904302"}


id: GO:0090055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of silent mating-type cassette heterochromatin formation","termid":"GO:0090054"},{"relation_name":"positively_regulates","term_name":"silent mating-type cassette heterochromatin formation","termid":"GO:0030466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"positive regulation of silent mating-type cassette heterochromatin formation","synonyms":[{"name":"positive regulation of chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"positive regulation of silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0090055"}


id: PBO:0090479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ family ubiquitin-type ligase substrate adaptor Btb1","termid":"PBO:0090479"}


id: GO:1905889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to very-low-density lipoprotein particle stimulus.","definition_xrefs":["GOC:aruk","GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:7592957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:1905890"},{"relation_name":"positively_regulates","term_name":"cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:0090731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"activation of cellular response to VLDL particle stimulus","type":"narrow"},{"name":"activation of cellular response to very-low-density lipoprotein particle stimulus","type":"narrow"},{"name":"positive regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"up regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"up regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"up-regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"up-regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"upregulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"upregulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"}],"termid":"GO:1905889"}


id: PBO:0053048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 6, translational regulator","termid":"PBO:0053048"}


id: GO:0019416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of thiosulfate to tetrathionate, using cytochrome c as an electron acceptor.","definition_xrefs":["MetaCyc:THIOSULFOX-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"polythionate oxidation","termid":"GO:0019416"}


id: RO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal or contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causes_or_contributes_to_condition","termid":"RO:0003302"}


id: GO:1900973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sarcinapterin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of sarcinapterin metabolic process","termid":"GO:1900970"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin biosynthetic process","termid":"GO:1900971"},{"relation_name":"positively_regulates","term_name":"sarcinapterin biosynthetic process","termid":"GO:1900868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0042559"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042559"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sarcinapterin biosynthetic process","synonyms":[{"name":"activation of sarcinapterin anabolism","type":"exact"},{"name":"activation of sarcinapterin biosynthesis","type":"exact"},{"name":"activation of sarcinapterin biosynthetic process","type":"narrow"},{"name":"activation of sarcinapterin formation","type":"exact"},{"name":"activation of sarcinapterin synthesis","type":"exact"},{"name":"positive regulation of sarcinapterin anabolism","type":"exact"},{"name":"positive regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"positive regulation of sarcinapterin formation","type":"exact"},{"name":"positive regulation of sarcinapterin synthesis","type":"exact"},{"name":"up regulation of sarcinapterin anabolism","type":"exact"},{"name":"up regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"up regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"up regulation of sarcinapterin formation","type":"exact"},{"name":"up regulation of sarcinapterin synthesis","type":"exact"},{"name":"up-regulation of sarcinapterin anabolism","type":"exact"},{"name":"up-regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"up-regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"up-regulation of sarcinapterin formation","type":"exact"},{"name":"up-regulation of sarcinapterin synthesis","type":"exact"},{"name":"upregulation of sarcinapterin anabolism","type":"exact"},{"name":"upregulation of sarcinapterin biosynthesis","type":"exact"},{"name":"upregulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"upregulation of sarcinapterin formation","type":"exact"},{"name":"upregulation of sarcinapterin synthesis","type":"exact"}],"termid":"GO:1900973"}


id: GO:0072125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in kidney development","termid":"GO:1901723"},{"relation_name":"negatively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"}


id: PBO:0012536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_maturation_of","termid":"PBO:0012536"}


id: SO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence ACGCGT, bound by the transcription factor complex MBF (MCB-binding factor) and found in promoters of genes expressed during the G1/S transition of the cell cycle.","definition_xrefs":["PMID:16285853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCB","synonyms":[{"name":"MluI cell cycle box","type":"exact"}],"termid":"SO:0001855"}


id: GO:0051628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of epinephrine uptake","termid":"GO:0051626"},{"relation_name":"positively_regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epinephrine uptake","synonyms":[{"name":"activation of epinephrine uptake","type":"narrow"},{"name":"positive regulation of adrenaline uptake","type":"exact"},{"name":"positive regulation of epinephrine import","type":"exact"},{"name":"stimulation of epinephrine uptake","type":"narrow"},{"name":"up regulation of epinephrine uptake","type":"exact"},{"name":"up-regulation of epinephrine uptake","type":"exact"},{"name":"upregulation of epinephrine uptake","type":"exact"}],"termid":"GO:0051628"}


id: PATO:0000443
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern quality inhering in a bearer by virtue of the bearer's disrupted sleep during normal sleeping period; often accompanied by cataplexy, sleep paralysis.","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000443 narcolepsy (obsolete PATO:0000443)","termid":"PATO:0000443"}


id: PBO:0064260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A8","termid":"PBO:0064260"}


id: PBO:0042923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 1","termid":"PBO:0042923"}


id: PBO:0029520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_septated_spheroid_cells_(obsolete_FYPO:0002194)","termid":"PBO:0029520"}


id: PBO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere localized protein Cnl2","termid":"PBO:0001052"}


id: PBO:0003264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-N (predicted)","termid":"PBO:0003264"}


id: GO:0071715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of icosanoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Icosanoids are unsaturated C20 fatty acids and skeletally related compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"icosanoid transport","synonyms":[{"name":"eicosanoid transport","type":"exact"}],"termid":"GO:0071715"}


id: PBO:0076237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 6 pseudogene 1","termid":"PBO:0076237"}


id: PBO:0074338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1","termid":"PBO:0074338"}


id: GO:2000351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"endothelial cell apoptotic process","termid":"GO:0072577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell apoptotic process","synonyms":[{"name":"regulation of apoptosis of endothelial cells","type":"exact"},{"name":"regulation of endothelial cell apoptosis","type":"narrow"},{"name":"regulation of endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"regulation of killing of endothelial cells","type":"exact"},{"name":"regulation of programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"regulation of programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:2000351"}


id: PBO:0026838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle_pole_body_during_anaphase","termid":"PBO:0026838"}


id: GO:0036519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a serotonergic neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:PARL","GOC:bf","CL:0000850","PMID:21106844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemorepulsion of axon","termid":"GO:0061643"},{"relation_name":"part_of","term_name":"serotonergic neuron axon guidance","termid":"GO:0036515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of serotonergic neuron axon","synonyms":[{"name":"chemorepulsion of 5-HT axon","type":"exact"},{"name":"chemorepulsion of serotonergic axon","type":"related"}],"termid":"GO:0036519"}


id: PBO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketoreductase (predicted)","termid":"PBO:0001470"}


id: PBO:0043278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member A","termid":"PBO:0043278"}


id: PBO:0064109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKD1 antisense RNA 1","termid":"PBO:0064109"}


id: FYPO:0005169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the centromere central core occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at centromere central core during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 methylation at centromere central core during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at centromere central core during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0005169"}


id: SO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The junction where an insertion occurred.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_site","synonyms":[{"name":"insertion site","type":"exact"}],"termid":"SO:0000366"}


id: PBO:0075843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 4","termid":"PBO:0075843"}


id: PBO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious","termid":"PBO:0000223"}


id: GO:1904492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Ac-Asp-Glu.","definition_xrefs":["GOC:hal","GOC:BHF","PMID:24863754","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"oligopeptide binding","termid":"GO:1900750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Ac-Asp-Glu binding","termid":"GO:1904492"}


id: PBO:0049685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAGLR opposite strand lncRNA","termid":"PBO:0049685"}


id: GO:0008093
data:
  {"annotated_genes":["SJAG_03200","SJAG_00030","SJAG_02737","SJAG_02045","SJAG_03264","SJAG_00700","SJAG_04077","SJAG_03564","SJAG_00268","SJAG_02795","SJAG_00397","SJAG_01143","SJAG_07018","SJAG_03596","SJAG_05196","SJAG_04558","SJAG_02246","SJAG_05179","SJAG_03673","SJAG_04498","SJAG_00368","SJAG_04479","SJAG_03116"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86925,93754,95038,100498],"is_not":false,"summary":null,"term":"GO:0008093"},{"annotations":[102479,113047,110010,98546,113135,88151,108768,98776,107853,102080,98221,102478,108292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106006"},{"annotations":[96771,98860,95603,94004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140475"},{"annotations":[98629,108843,85653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106166"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings together a cytoskeletal protein (either a microtubule or actin filament, spindle pole body, or protein directly bound to them) and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["PMID:30323238","GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00268":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00700":null,"SJAG_01143":null,"SJAG_02045":null,"SJAG_02246":null,"SJAG_02737":null,"SJAG_02795":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_03264":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03673":null,"SJAG_04077":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04558":null,"SJAG_05179":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"cytoskeletal anchor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoskeletal adaptor activity","type":"exact"}],"termid":"GO:0008093","terms_by_termid":{"GO:0008093":null,"GO:0106006":null,"GO:0106166":null,"GO:0140475":null}}


id: PBO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 44","termid":"PBO:0052752"}


id: PR:000027595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht3 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.3","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"hht3","type":"exact"}],"termid":"PR:000027595"}


id: PBO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF962 family protein","termid":"PBO:0002082"}


id: PBO:0049655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 9","termid":"PBO:0049655"}


id: GO:0045743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"activation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of FGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of FGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of FGFR signaling pathway","type":"exact"},{"name":"stimulation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of fibroblast growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045743"}


id: FYPO:0005943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal translocation that would result in the loss of one of two different alleles of a gene occurs to a lower extent than normal.","definition_xrefs":["PMID:19798055","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased break-induced loss of heterozygosity","termid":"FYPO:0005451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased break-induced loss of heterozygosity via chromosomal translocation","synonyms":[{"name":"decreased break-induced loss of heterozygosity via chromosomal translocation during mitotic cell cycle","type":"related"},{"name":"decreased break-induced loss of heterozygosity via chromosomal translocation during vegetative growth","type":"exact"},{"name":"reduced break-induced loss of heterozygosity via chromosomal translocation","type":"exact"}],"termid":"FYPO:0005943"}


id: PBO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.-.-.-","termid":"PBO:0000309"}


id: GO:1905488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16516839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of anterior/posterior axon guidance","termid":"GO:1905486"},{"relation_name":"positively_regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior/posterior axon guidance","synonyms":[{"name":"activation of anterior-posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon pathfinding","type":"narrow"},{"name":"positive regulation of anterior-posterior axon guidance","type":"exact"},{"name":"positive regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up-regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"upregulation of anterior-posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905488"}


id: PATO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a leaf.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leaf-like","termid":"PATO:0002457"}


id: GO:1900004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine-type endopeptidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endopeptidase activity","termid":"GO:0010951"},{"relation_name":"is_a","term_name":"regulation of serine-type endopeptidase activity","termid":"GO:1900003"},{"relation_name":"is_a","term_name":"negative regulation of serine-type peptidase activity","termid":"GO:1902572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine-type endopeptidase activity","synonyms":[{"name":"down regulation of blood coagulation factor activity","type":"related"},{"name":"down regulation of serine-type endopeptidase activity","type":"related"},{"name":"negative regulation of blood coagulation factor activity","type":"related"}],"termid":"GO:1900004"}


id: SO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 16S_rRNA, which functions as the small subunit of the ribosome in prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA_gene","termid":"SO:0002362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_16S_gene","synonyms":[{"name":"16S rRNA gene","type":"exact"},{"name":"16S_rRNA_gene","type":"exact"}],"termid":"SO:0002237"}


id: PBO:0054405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1801","termid":"PBO:0054405"}


id: GO:0002929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly stable complex composed of the ATAC complex and the mediator complex (also called TRAP or MED). MECO binds and regulates the transcription of a subset of non-coding RNAs transcribed by RNA polymerase II.","definition_xrefs":["GOC:hjd","PMID:20508642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MECO complex","synonyms":[{"name":"meta-coactivator complex","type":"exact"}],"termid":"GO:0002929"}


id: GO:0042200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanuric acid, a potential degradation product of triazine herbicides.","definition_xrefs":["UM-BBD_pathwayID:cya"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanuric acid metabolic process","termid":"GO:0042199"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"cyanuric acid catabolic process","synonyms":[{"name":"cyanuric acid breakdown","type":"exact"},{"name":"cyanuric acid catabolism","type":"exact"},{"name":"cyanuric acid degradation","type":"exact"}],"termid":"GO:0042200"}


id: PBO:0089453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C Pgc1 /SMN complex subunit Gem6, tandem fusion","termid":"PBO:0089453"}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: PBO:0081161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein 2","termid":"PBO:0081161"}


id: PBO:0072789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 4, pseudogene","termid":"PBO:0072789"}


id: PBO:0043561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type V alpha 3 chain","termid":"PBO:0043561"}


id: GO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of a reaction that results in the formation of carbamoyl phosphate.","definition_xrefs":["GOC:mah","EC:6.3.5.5","EC:6.3.4.16"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamoyl-phosphate synthase activity (obsolete GO:0004086)","synonyms":[{"name":"carbamoyl phosphate synthase activity","type":"exact"},{"name":"carbamoyl-phosphate synthase activity","type":"exact"}],"termid":"GO:0004086"}


id: GO:1990748
data:
  {"annotated_genes":["SJAG_03108","SJAG_01628","SJAG_03497","SJAG_04242","SJAG_01596","SJAG_02599","SJAG_04403","SJAG_03303","SJAG_04726","SJAG_02630","SJAG_02973","SJAG_05256","SJAG_02988","SJAG_01216","SJAG_04404","SJAG_00141","SJAG_01734","SJAG_04632","SJAG_04516","SJAG_00219","SJAG_00365","SJAG_01612","SJAG_00179","SJAG_00903","SJAG_03166","SJAG_03316","SJAG_05181","SJAG_01973","SJAG_04608","SJAG_01651","SJAG_02907","SJAG_01199","SJAG_04399","SJAG_03494","SJAG_02515","SJAG_01457","SJAG_04674","SJAG_02276","SJAG_00489","SJAG_02106","SJAG_04788","SJAG_01404","SJAG_04953","SJAG_03476","SJAG_00270","SJAG_03797","SJAG_01344","SJAG_03288","SJAG_04125","SJAG_00614","SJAG_06611","SJAG_03653","SJAG_04823","SJAG_01162","SJAG_01351","SJAG_02247","SJAG_04063","SJAG_00988","SJAG_01995","SJAG_02960","SJAG_02010","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83441,83445,83545,85632,88007,88732,88733,90325,90330,90610,90682,92804,94096,94759,94950,95590,95803,96082,97594,98599,98672,99455,102488,104639,108272,109030,109496,109535,110658,110754,112205,114256,114691,114830],"is_not":false,"summary":null,"term":"GO:1990748"},{"annotations":[108728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110095"},{"annotations":[92751,114282,104349,92712,88921,93078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"},{"annotations":[96593,109788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140114"},{"annotations":[100882,104756,90861,114374,95748,113455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[100885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140041"},{"annotations":[98017,82860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070458"},{"annotations":[90862,102681,57211,101153,65216,101069,57213,68047,65217,68514,68515,68513,57212,63448,68516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098869"},{"annotations":[99305,91213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[95907,113460,84477,106035,88747,68462,95022,65065,106083,58052,84910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a toxic substance. These may include transport of the toxic substance away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"cellular response to toxic substance","termid":"GO:0097237"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_02988":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03653":null,"SJAG_03797":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1990748","terms_by_termid":{"GO:0019430":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1990748":null}}


id: PBO:0004059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Ucp3 (predicted)","termid":"PBO:0004059"}


id: FYPO:0000370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA modification is abnormal. All RNA modification may be abnormal, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA modification","synonyms":[{"name":"RNA modification: abnormal","type":"related"},{"name":"abnormal RNA modification during mitotic cell cycle","type":"related"},{"name":"abnormal RNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000370"}


id: GO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RHG (reaper/hid/grimm) domain/motif (AKA iap binding motif).","definition_xrefs":["GOC:dos","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"RHG protein domain binding","synonyms":[{"name":"RHG domain binding","type":"exact"},{"name":"iap binding domain binding","type":"exact"},{"name":"inhibitor of apoptosis binding domain binding","type":"exact"},{"name":"reaper hid grim domain binding","type":"exact"}],"termid":"GO:0089719"}


id: PBO:0055916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A4, pseudogene","termid":"PBO:0055916"}


id: GO:1902882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:16899554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to oxidative stress","termid":"GO:1902882"}


id: PBO:0067542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 688, pseudogene","termid":"PBO:0067542"}


id: GO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular organofluorine metabolic process","termid":"GO:0090348"},{"relation_name":"is_a","term_name":"negative regulation of cellular organohalogen metabolic process","termid":"GO:0090349"},{"relation_name":"negatively_regulates","term_name":"cellular organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular organofluorine metabolic process","termid":"GO:0090350"}


id: GO:0035480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"regulates","term_name":"Notch signaling pathway involved in heart induction","termid":"GO:0003137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Notch signaling pathway involved in heart induction","synonyms":[{"name":"regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035480"}


id: MOD:00338
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-cyano-L-cysteine.","definition_xrefs":["PubMed:12586941","PubMed:4808702","RESID:AA0333","Unimod:438#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-cyano-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-thiocyanatopropanoic acid","type":"exact"},{"name":"Cyano","type":"related"},{"name":"MOD_RES S-cyanocysteine","type":"exact"},{"name":"S-cyano-L-cysteine","type":"exact"},{"name":"S-cyanocysteine","type":"exact"},{"name":"alpha-amino-beta-thiocyanatopropionic acid","type":"exact"},{"name":"beta-thiocyanatoalanine","type":"exact"},{"name":"cyano","type":"related"},{"name":"serine thiocyanic acid ester","type":"exact"}],"termid":"MOD:00338"}


id: PBO:0074106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC28A2 antisense RNA 1","termid":"PBO:0074106"}


id: GO:0098590
data:
  {"annotated_genes":["SJAG_04358","SJAG_00368","SJAG_02572","SJAG_04673","SJAG_03536","SJAG_02351","SJAG_01114","SJAG_01345","SJAG_01189","SJAG_01660","SJAG_04714","SJAG_03915","SJAG_01888","SJAG_04506","SJAG_04905","SJAG_02924","SJAG_02392","SJAG_01978","SJAG_02258","SJAG_01738","SJAG_01983","SJAG_01388","SJAG_04620","SJAG_05285","SJAG_01794","SJAG_02684","SJAG_04509","SJAG_02222","SJAG_04001","SJAG_00514","SJAG_02989","SJAG_04668","SJAG_02916","SJAG_03608","SJAG_04637","SJAG_01437"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016324"},{"annotations":[87957,85363,111888,95498,102927,83346,101973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032154"},{"annotations":[86808,83457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090689"},{"annotations":[91520,102471],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106186"},{"annotations":[94722,83609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070250"},{"annotations":[92055,106138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070867"},{"annotations":[110432,111895,83355,83755,104364,113296,111527,87962,89101,91202,106813,105372,102472,96445,92743,97578,83611,88051,96121,88273,98819,110226,85370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031520"},{"annotations":[95387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902929"},{"annotations":[84839,83930,99070,114621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane that is a (regional) part of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01189":null,"SJAG_01345":null,"SJAG_01388":null,"SJAG_01437":null,"SJAG_01660":null,"SJAG_01738":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02222":null,"SJAG_02258":null,"SJAG_02351":null,"SJAG_02392":null,"SJAG_02572":null,"SJAG_02684":null,"SJAG_02916":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03536":null,"SJAG_03608":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04358":null,"SJAG_04506":null,"SJAG_04509":null,"SJAG_04620":null,"SJAG_04637":null,"SJAG_04668":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04905":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane region","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"region of plasma membrane","type":"exact"}],"termid":"GO:0098590","terms_by_termid":{"GO:0016324":null,"GO:0031520":null,"GO:0032154":null,"GO:0044853":null,"GO:0070250":null,"GO:0070867":null,"GO:0090689":null,"GO:0106186":null,"GO:1902929":null}}


id: PBO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor 1 like","termid":"PBO:0060149"}


id: FYPO:0006402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 36 of histone H3 in one or more promoter regions does not occur.","definition_xrefs":["PMID:28903048","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K36 trimethylation during vegetative growth","termid":"FYPO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K36 trimethylation at promoter during vegetative growth","synonyms":[{"name":"abolished histone H3 K36 trimethylation at promoter during vegetative growth","type":"exact"},{"name":"abolished histone H3-K36 trimethylation at promoter during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K36me3 at promoter during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K36 trimethylation at promoter during vegetative growth","type":"exact"},{"name":"histone H3-K36 trimethylation abolished at promoter during vegetative growth","type":"exact"},{"name":"histone H3-K36 trimethylation absent at promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0006402"}


id: PBO:0056944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-3 host gene","termid":"PBO:0056944"}


id: GO:1900796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terrequinone A.","definition_xrefs":["PMID:17291795","GOC:TermGenie","PMID:17704773","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"terrequinone A biosynthetic process","secondary_identifiers":["GO:1900794"],"synonyms":[{"name":"terrequinone A anabolism","type":"exact"},{"name":"terrequinone A biosynthesis","type":"exact"},{"name":"terrequinone A formation","type":"exact"},{"name":"terrequinone A metabolic process","type":"broad"},{"name":"terrequinone A metabolism","type":"broad"},{"name":"terrequinone A synthesis","type":"exact"}],"termid":"GO:1900796"}


id: PBO:0075703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum response factor","termid":"PBO:0075703"}


id: PBO:0030274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030274"}


id: PBO:0051241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-53-1 (pseudogene)","termid":"PBO:0051241"}


id: GO:1902796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA processing.","definition_xrefs":["PMID:24210919","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of snoRNA processing","termid":"GO:1902796"}


id: PBO:0078496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon GAT) 1-3","termid":"PBO:0078496"}


id: PBO:0063284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 10","termid":"PBO:0063284"}


id: PBO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 82","termid":"PBO:0070614"}


id: PR:Q9UTJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphomannomutase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01572","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.07","secondary_identifiers":["UniProtKB:Q9UTJ2"],"synonyms":[{"name":"PMM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PMM1","type":"exact"}],"termid":"PR:Q9UTJ2"}


id: PBO:0054694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2103","termid":"PBO:0054694"}


id: PBO:0060868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 11","termid":"PBO:0060868"}


id: GO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventricular septum intermedium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septum development","termid":"GO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum intermedium development","termid":"GO:0003282"}


id: PBO:0048865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 10","termid":"PBO:0048865"}


id: PBO:0031234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_or_maintenance_of_actin_cytoskeleton_polarity","termid":"PBO:0031234"}


id: PBO:0044079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 1","termid":"PBO:0044079"}


id: PBO:0051870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL LIM homeobox 2","termid":"PBO:0051870"}


id: GO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of F2-isoprostane.","definition_xrefs":["PMID:25449649","PMID:16371369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"F2-isoprostane catabolic process","termid":"GO:0062233"}


id: PBO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase family Scn1","termid":"PBO:0001902"}


id: GO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cardiac skeleton over time, from its formation to the mature structure. The cardiac skeleton is a specialized extracellular matrix that separates the atria from the ventricles and provides physical support for the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac skeleton development","synonyms":[{"name":"heart fibrous skeleton development","type":"exact"}],"termid":"GO:0003204"}


id: GO:0048328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"regulates","term_name":"axial mesodermal cell fate specification","termid":"GO:0048327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axial mesodermal cell fate specification","termid":"GO:0048328"}


id: PBO:0057463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 582","termid":"PBO:0057463"}


id: PBO:0003598
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.5","termid":"PBO:0003598"}


id: PBO:0056335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 15","termid":"PBO:0056335"}


id: PBO:0034776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Vps902","termid":"PBO:0034776"}


id: PBO:0026770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_uracil_import","termid":"PBO:0026770"}


id: PBO:0041875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic arginine sensor for mTORC1 subunit 2","termid":"PBO:0041875"}


id: PBO:0039473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18C, pseudogene","termid":"PBO:0039473"}


id: PR:Q9P7Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDT1-like protein C186.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.05c","synonyms":[{"name":"Spom972h-SPAC186.05c","type":"exact"}],"termid":"PR:Q9P7Q0"}


id: FYPO:0004415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased phosphatase activity","termid":"FYPO:0004415"}


id: PBO:0046549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 3","termid":"PBO:0046549"}


id: GO:0030962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dihydroxylation of peptidyl-arginine to form peptidyl-3,4-dihydroxy-L-arginine.","definition_xrefs":["PMID:10978343","RESID:AA0369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine hydroxylation","termid":"GO:0030961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine dihydroxylation to peptidyl-3,4-dihydroxy-L-arginine","termid":"GO:0030962"}


id: PBO:0027006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_prospore_membrane_formation","termid":"PBO:0027006"}


id: PBO:0065643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 21","termid":"PBO:0065643"}


id: PBO:0029845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_acetylation","termid":"PBO:0029845"}


id: PBO:0079123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone subunit beta","termid":"PBO:0079123"}


id: FYPO:0005660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is decreased.","definition_xrefs":["PMID:25414342","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal frequency of meiotic crossover associated with gene conversion","termid":"FYPO:0005658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"decreased levels of meiotic crossover associated with a gene conversion event","type":"exact"},{"name":"reduced frequency of meiotic crossover associated with gene conversion","type":"exact"}],"termid":"FYPO:0005660"}


id: PBO:0056367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 4","termid":"PBO:0056367"}


id: MOD:01578
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01578"}


id: PBO:0073339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 1","termid":"PBO:0073339"}


id: PBO:0028059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcriptional_response_to_pheromone","termid":"PBO:0028059"}


id: PBO:0085507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10B has a paralog, RPS10A, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia","termid":"PBO:0085507"}


id: GO:0031201
data:
  {"annotated_genes":["SJAG_00557","SJAG_04909","SJAG_03848","SJAG_04978","SJAG_04023","SJAG_04701","SJAG_03536","SJAG_03347","SJAG_02103","SJAG_04739","SJAG_00826","SJAG_02204","SJAG_03754","SJAG_04513","SJAG_02586","SJAG_01324","SJAG_02241","SJAG_00171","SJAG_03552"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86088,87822,89271,89525,93818,95247,95646,95963,96866,103278,103939,104604,105593,105740,108677,113633,114625,114713],"is_not":false,"summary":null,"term":"GO:0031201"},{"annotations":[96518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070044"}]},"cv_name":"cellular_component","definition":"A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.","definition_xrefs":["GOC:bhm","GOC:pr","PMID:19450911","PMID:10872468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_02103":null,"SJAG_02204":null,"SJAG_02241":null,"SJAG_02586":null,"SJAG_03347":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03754":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04701":null,"SJAG_04739":null,"SJAG_04909":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"SNARE complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031201","terms_by_termid":{"GO:0031201":null,"GO:0070044":null}}


id: GO:0072692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Repression of transcription of DNA at the central core of a regional centromere by altering the structure of chromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin silencing at centromere central core (obsolete GO:0072692)","synonyms":[{"name":"centromere central core chromatin silencing","type":"exact"},{"name":"chromatin silencing at centromeric central core","type":"exact"},{"name":"chromatin silencing at chromosome kinetochore domain","type":"exact"},{"name":"heterochromatic silencing at centromere central core","type":"exact"}],"termid":"GO:0072692"}


id: PBO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA acetyltransferase (predicted)","termid":"PBO:0004432"}


id: GO:0102056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + an 11-hydroxyjasmonate = adenosine 3',5'-bismonophosphate + H+ + an 11-hydroxyjasmonate sulfate.","definition_xrefs":["GOC:pz","RHEA:52732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"11-hydroxyjasmonate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-10453","EC:2.8.2.39"],"termid":"GO:0102056"}


id: PBO:0078230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-5","termid":"PBO:0078230"}


id: FYPO:0002052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal sporulation frequency","synonyms":[{"name":"normal ascospore formation frequency","type":"exact"},{"name":"normal sporulation occurrence","type":"exact"}],"termid":"FYPO:0002052"}


id: GO:0046265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiocyanate, any anion of thiocyanic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiocyanate metabolic process","termid":"GO:0018969"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"thiocyanate catabolic process","synonyms":[{"name":"thiocyanate breakdown","type":"exact"},{"name":"thiocyanate catabolism","type":"exact"},{"name":"thiocyanate degradation","type":"exact"}],"termid":"GO:0046265"}


id: PBO:0035954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_negative_regulation_of_protein_kinase_activity_during_mitosis","termid":"PBO:0035954"}


id: PR:Q9Y800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug97 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 97 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.11c","synonyms":[{"name":"Spom972h-mug97","type":"exact"},{"name":"meiotic expression up-regulated protein 33 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y800"}


id: PBO:0089939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Srs2 interacting SWIM domain protein Srs1","termid":"PBO:0089939"}


id: GO:1900375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of inositol biosynthetic process.","definition_xrefs":["GOC:go_curators","PMID:2004420","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900375)","synonyms":[{"name":"activation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900375"}


id: GO:0045315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor development.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of eye photoreceptor cell development","termid":"GO:0042479"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor development","termid":"GO:0045314"},{"relation_name":"positively_regulates","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye photoreceptor development","synonyms":[{"name":"activation of eye photoreceptor development","type":"broad"},{"name":"positive regulation of eye photoreceptor development","type":"broad"},{"name":"stimulation of eye photoreceptor development","type":"broad"},{"name":"up regulation of eye photoreceptor development","type":"broad"},{"name":"up-regulation of eye photoreceptor development","type":"broad"},{"name":"upregulation of eye photoreceptor development","type":"broad"}],"termid":"GO:0045315"}


id: PBO:0055962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 75A","termid":"PBO:0055962"}


id: MOD:01433
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 1-amino-2-propanone.","definition_xrefs":["PubMed:12715872","PubMed:19196969","RESID:AA0486","ChEBI:17906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated residue","termid":"MOD:00683"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-amino-2-propanone","synonyms":[{"name":"1-amino-2-propanone","type":"exact"},{"name":"1-aminopropan-2-one","type":"exact"},{"name":"1-aminopropanone","type":"exact"},{"name":"MOD_RES 1-amino-2-propanone","type":"exact"},{"name":"aminoacetone","type":"exact"}],"termid":"MOD:01433"}


id: PBO:0072298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 16","termid":"PBO:0072298"}


id: MOD:01407
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazoline-4-carboxylic acid.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine thiazoline-4-carboxylic acid","synonyms":[{"name":"(4R)-2-[(1S)-1-amino-2-phenylethyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazoline-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01407"}


id: PBO:0078435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-5","termid":"PBO:0078435"}


id: PBO:0029598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sodium:hydrogen_antiporter_activity","termid":"PBO:0029598"}


id: PBO:0076813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 1","termid":"PBO:0076813"}


id: PBO:0048283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 17","termid":"PBO:0048283"}


id: PR:Q9C106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12949:SF0","PRO:DNx","OMA:SCHPO01373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.03","secondary_identifiers":["UniProtKB:Q9C106"],"synonyms":[{"name":"RNA polymerase III subunit C3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C82 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3C","type":"exact"}],"termid":"PR:Q9C106"}


id: GO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an epidermal growth factor-type receptor binding to one of its physiological ligands. This process contributes to lung development.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway involved in lung development","synonyms":[{"name":"epidermal growth factor receptor signalling pathway involved in lung development","type":"exact"}],"termid":"GO:0060507"}


id: PBO:0035968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_cable_assembly","termid":"PBO:0035968"}


id: PR:O74842
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.05c","synonyms":[{"name":"Fun thirty-related protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft2","type":"exact"}],"termid":"PR:O74842"}


id: GO:0051306
data:
  {"annotated_genes":["SJAG_01297","SJAG_02336","SJAG_03353","SJAG_04999","SJAG_04259","SJAG_00460","SJAG_03350","SJAG_01330","SJAG_03048","SJAG_03351","SJAG_02451","SJAG_00146","SJAG_01956","SJAG_01082","SJAG_04968","SJAG_04573","SJAG_05236","SJAG_04884","SJAG_04126","SJAG_02498","SJAG_02380","SJAG_01805","SJAG_03126","SJAG_03681","SJAG_04661","SJAG_05329","SJAG_02169","SJAG_00883","SJAG_04699","SJAG_00666","SJAG_01679","SJAG_02542","SJAG_02186","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85869,87287,90834,92297,95343,95348,96568,97627,113663],"is_not":false,"summary":null,"term":"GO:0051306"},{"annotations":[99733,104172,110320,95326,109830,86249,111981,103125,107939],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[109834,95182,111619,105850,97588,110560,102197,112764,86252],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[111620,102198],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045841"},{"annotations":[99099],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000816"},{"annotations":[89833],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112768],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[107339,93412,110321,95884,97904,110830,89438,98176],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[112770],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905824"},{"annotations":[95349,93413],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901970"}]},"cv_name":"biological_process","definition":"The process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00146":null,"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04661":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05236":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome separation during mitosis","type":"related"},{"name":"mitotic chromosome separation","type":"related"},{"name":"mitotic sister chromatid resolution","type":"exact"},{"name":"sister chromatid separation during mitosis","type":"exact"}],"termid":"GO:0051306","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0045842":null,"GO:0051306":null,"GO:0090267":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905824":null,"GO:2000816":null}}


id: GO:0047228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacylglycerol + UDP-D-glucose = 3-D-glucosyl-1,2-diacylglycerol + UDP.","definition_xrefs":["MetaCyc:2.4.1.157-RXN","EC:2.4.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,2-diacylglycerol 3-glucosyltransferase activity","synonyms":[{"name":"UDP-glucose-diacylglycerol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacylglycerol 3-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacylglycerol glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,2-diacylglycerol 3-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:diacylglycerol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-diacylglycerol glucosyltransferase activity","type":"related"}],"termid":"GO:0047228"}


id: PBO:0047603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 2B","termid":"PBO:0047603"}


id: GO:0031089
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet dense granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet dense granule","termid":"GO:0042827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"platelet dense granule lumen","termid":"GO:0031089"}


id: GO:0071523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a TIR domain interaction.","definition_xrefs":["GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete TIR domain-mediated complex assembly (obsolete GO:0071523)","termid":"GO:0071523"}


id: PBO:0027735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cytoplasm_with_protein_mislocalized_to_nucleolus_during_cellular_response_to_latrunculin_B","termid":"PBO:0027735"}


id: GO:0010296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein C-terminal S-farnesyl-L-cysteine methyl ester + H2O = protein C-terminal S-farnesyl-L-cysteine + methanol + H+.","definition_xrefs":["PMID:16870359","RHEA:48520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"prenylcysteine methylesterase activity","secondary_identifiers":["MetaCyc:RXN-8409"],"termid":"GO:0010296"}


id: MOD:00378
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartyl semialdehyde.","definition_xrefs":["Unimod:447#D","PubMed:14235557","PubMed:1093385","RESID:AA0373","PubMed:15237995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"deoxygenated residue","termid":"MOD:01161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartyl semialdehyde","synonyms":[{"name":"(S)-2-amino-4-oxobutanoic acid","type":"exact"},{"name":"Deoxy","type":"related"},{"name":"L-aminosuccinaldehydic acid","type":"exact"},{"name":"L-aminosuccinic acid semialdehyde","type":"exact"},{"name":"L-aspartate-beta-semialdehyde","type":"exact"},{"name":"L-aspartic beta-semialdehyde","type":"exact"},{"name":"L-aspartyl aldehyde","type":"exact"},{"name":"L-beta-formylalanine","type":"exact"},{"name":"MOD_RES Aspartyl aldehyde","type":"exact"},{"name":"aspartyl 4-semialdehyde","type":"exact"},{"name":"aspartyl aldehyde","type":"exact"},{"name":"reduction","type":"related"}],"termid":"MOD:00378"}


id: GO:2001237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"negatively_regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"negative regulation of extrinsic apoptosis","type":"narrow"},{"name":"negative regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001237"}


id: GO:0008816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-citryl-CoA = acetyl-CoA + oxaloacetate.","definition_xrefs":["EC:4.1.3.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"citryl-CoA lyase activity","secondary_identifiers":["MetaCyc:CITRYLY-RXN","RHEA:20812"],"synonyms":[{"name":"(3S)-citryl-CoA oxaloacetate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(3S)-citryl-CoA oxaloacetate-lyase activity","type":"related"}],"termid":"GO:0008816"}


id: GO:0031941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A two-stranded helical polymer of the protein actin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin filament","termid":"GO:0005884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"filamentous actin","secondary_identifiers":["Wikipedia:Actin"],"synonyms":[{"name":"F-actin","type":"exact"}],"termid":"GO:0031941"}


id: PBO:0038529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 3, phospholipase","termid":"PBO:0038529"}


id: PBO:0004707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin activating enzyme E1","termid":"PBO:0004707"}


id: PBO:0078173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-4","termid":"PBO:0078173"}


id: FYPO:0005201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to heat stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to heat stress","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to heat stress","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to heat stress during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to heat stress during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to heat stress","type":"exact"}],"termid":"FYPO:0005201"}


id: GO:0030614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a disulfide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor","secondary_identifiers":["EC:1.20.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with disulphide as acceptor","type":"exact"}],"termid":"GO:0030614"}


id: PBO:0039167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchor inhibitor 1","termid":"PBO:0039167"}


id: FYPO:0002411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable curved elongated vegetative cell","synonyms":[{"name":"curved elongated inviable cell","type":"exact"},{"name":"inviable curved elongated cell","type":"exact"},{"name":"inviable curved elongated cell during vegetative growth","type":"exact"},{"name":"inviable curved elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002411"}


id: PBO:0031704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_export","termid":"PBO:0031704"}


id: GO:0014012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons outside the central nervous system (outside the brain and spinal cord) following an axonal injury.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system axon regeneration","synonyms":[{"name":"axon regeneration in peripheral nervous system","type":"exact"}],"termid":"GO:0014012"}


id: PBO:0044461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 60, pseudogene","termid":"PBO:0044461"}


id: PBO:0039701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inhibitor 5 pseudogene 2","termid":"PBO:0039701"}


id: GO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from within the mitotic spindle.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"mitotic spindle-templated microtubule nucleation","termid":"GO:0090221"}


id: GO:0072384
data:
  {"annotated_genes":["SJAG_04001","SJAG_02040","SJAG_05185","SJAG_00113","SJAG_02045","SJAG_00397","SJAG_00140","SJAG_02737","SJAG_01662","SJAG_01370","SJAG_04143","SJAG_01929","SJAG_01613","SJAG_01508","SJAG_02286","SJAG_02561","SJAG_03073","SJAG_00368","SJAG_02431","SJAG_01863","SJAG_04597","SJAG_03673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94286],"is_not":false,"summary":null,"term":"GO:0072384"},{"annotations":[93290,96496,83222,107178,107366,113041,87375,98775,97214,99075,110007,86527,86917,107001,90875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[102474,107180],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[97218],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"},{"annotations":[112706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047497"},{"annotations":[94982,93367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[86919,83226,90878,94983,84079,93292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[90050],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_01370":null,"SJAG_01508":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_01929":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"organelle transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based organelle localization","type":"exact"}],"termid":"GO:0072384","terms_by_termid":{"GO:0000743":null,"GO:0030989":null,"GO:0032118":null,"GO:0047497":null,"GO:0072384":null,"GO:0090561":null,"GO:1902854":null,"GO:1903563":null}}


id: PBO:0077780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tonsoku like, DNA repair protein","termid":"PBO:0077780"}


id: GO:0061051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"positively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061051"}


id: GO:0098939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in nerve cell dendrites.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion transport along microtubule","termid":"GO:0047497"},{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"dendritic transport of mitochondrion","termid":"GO:0098939"}


id: PBO:0031437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_plasmid_loss","termid":"PBO:0031437"}


id: PBO:0083368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps uncharacterized ORF YDL086W; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083368"}


id: PBO:0072845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2","termid":"PBO:0072845"}


id: PBO:0060019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 7","termid":"PBO:0060019"}


id: PBO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A7 family member B","termid":"PBO:0048904"}


id: PBO:0036031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_ribosomal_proteins_during_vegetative_growth","termid":"PBO:0036031"}


id: FYPO:0005966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal potassium import","synonyms":[{"name":"abnormal cellular potassium import","type":"exact"},{"name":"abnormal potassium import across plasma membrane","type":"exact"},{"name":"abnormal potassium import during mitotic cell cycle","type":"related"},{"name":"abnormal potassium import during vegetative growth","type":"exact"},{"name":"abnormal potassium import into cell","type":"exact"},{"name":"abnormal potassium ion import","type":"exact"}],"termid":"FYPO:0005966"}


id: PBO:0057101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 194-2","termid":"PBO:0057101"}


id: PBO:0062331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 70","termid":"PBO:0062331"}


id: GO:0033800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a 7-hydroxyisoflavone = S-adenosyl-L-homocysteine + a 7-methoxyisoflavone.","definition_xrefs":["EC:2.1.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"isoflavone 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-6241","RHEA:17933"],"synonyms":[{"name":"S-adenosyl-L-methionine:hydroxyisoflavone 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033800"}


id: PBO:0072814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 9 like","termid":"PBO:0072814"}


id: PBO:0041436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 40","termid":"PBO:0041436"}


id: PBO:0046474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELKS/RAB6-interacting/CAST family member 2","termid":"PBO:0046474"}


id: PBO:0051846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 2","termid":"PBO:0051846"}


id: PBO:0067171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 225, pseudogene","termid":"PBO:0067171"}


id: PBO:0080251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 14 pseudogene","termid":"PBO:0080251"}


id: GO:0030820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP catabolic process (obsolete GO:0030820)","synonyms":[{"name":"regulation of 3',5' cAMP catabolic process","type":"exact"},{"name":"regulation of 3',5' cAMP catabolism","type":"exact"},{"name":"regulation of 3',5'-cAMP catabolic process","type":"exact"},{"name":"regulation of 3',5'-cAMP catabolism","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate catabolic process","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate catabolism","type":"exact"},{"name":"regulation of cAMP breakdown","type":"exact"},{"name":"regulation of cAMP catabolism","type":"exact"},{"name":"regulation of cAMP degradation","type":"exact"},{"name":"regulation of cyclic AMP catabolic process","type":"exact"},{"name":"regulation of cyclic AMP catabolism","type":"exact"}],"termid":"GO:0030820"}


id: PBO:0084912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic exit network (MEN) scaffold protein; core component of the SPB outer plaque that functions in astral microtubule organization via Spc72p; scaffold for recruitment of MEN components, such as Cdc15p, Tem1p and the Bfa1p-Bub2p checkpoint complex; phosphorylation by Cdc15p creates a Dbf2p-Mob1p phospho-docking site enabling Cdc15p-dependent complex activation and mitotic exit; acts through the MEN to specify Kar9p-mediated asymmetric SPB inheritance; homologous to mammalian centriolin","termid":"PBO:0084912"}


id: PBO:0053865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1140","termid":"PBO:0053865"}


id: PBO:0055254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2681","termid":"PBO:0055254"}


id: PBO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 5","termid":"PBO:0050970"}


id: GO:0002752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a cell surface pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["GOC:ar","PMID:15199967","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface pattern recognition receptor signaling pathway","synonyms":[{"name":"cell surface PAMP receptor signaling pathway","type":"exact"},{"name":"cell surface PRR signaling pathway","type":"exact"},{"name":"cell surface pathogen receptor signaling pathway","type":"exact"},{"name":"cell surface pattern recognition receptor signalling pathway","type":"exact"}],"termid":"GO:0002752"}


id: PBO:0050556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HR lysine demethylase and nuclear receptor corepressor","termid":"PBO:0050556"}


id: PBO:0086553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL118C is not an essential gene","termid":"PBO:0086553"}


id: PBO:0001635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoric monoester hydrolase (predicted)","termid":"PBO:0001635"}


id: PBO:0076931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor EB","termid":"PBO:0076931"}


id: GO:0046067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dGDP, deoxyguanosine diphosphate, (2'-deoxyguanosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009184"},{"relation_name":"is_a","term_name":"dGDP metabolic process","termid":"GO:0046066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dGDP catabolic process","synonyms":[{"name":"dGDP breakdown","type":"exact"},{"name":"dGDP catabolism","type":"exact"},{"name":"dGDP degradation","type":"exact"}],"termid":"GO:0046067"}


id: PBO:0040671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 29","termid":"PBO:0040671"}


id: GO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,5-dihydroxypyridine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"2,5-dihydroxypyridine metabolic process","termid":"GO:0051165"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine catabolic process","synonyms":[{"name":"2,5-dihydroxypyridine breakdown","type":"exact"},{"name":"2,5-dihydroxypyridine catabolism","type":"exact"},{"name":"2,5-dihydroxypyridine degradation","type":"exact"},{"name":"pyridine-2,5-diol catabolic process","type":"exact"}],"termid":"GO:0051166"}


id: PBO:0079871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF1 RNA helicase and ATPase","termid":"PBO:0079871"}


id: PBO:0004272
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARC syndrome","termid":"PBO:0004272"}


id: PBO:0073665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal induced proliferation associated 1 like 1","termid":"PBO:0073665"}


id: GO:0052143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis on or near host involved in symbiotic interaction (obsolete GO:0052143)","synonyms":[{"name":"chemotaxis on or near host during symbiotic interaction","type":"related"}],"termid":"GO:0052143"}


id: RO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a 'neuron projection bundle' and a region in which one or more of its component neuron projections either synapses to targets or receives synaptic input.\\nT innervates some R\\nExpands_to: T has_fasciculating_neuron_projection that synapse_in some R.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervates","termid":"RO:0002134"}


id: GO:0080048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-glucose + phosphate = alpha-D-glucose-1-phosphate + GDP.","definition_xrefs":["PMID:17462988","PMID:18463094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"GDP-D-glucose phosphorylase activity","secondary_identifiers":["GO:0010474","MetaCyc:RXN-12486","EC:2.7.7.78","RHEA:30387"],"synonyms":[{"name":"GDP:glucose-1-phosphate guanyltransferase activity","type":"exact"},{"name":"glucose-1-phosphate guanylyltransferase (GDP) activity","type":"exact"}],"termid":"GO:0080048"}


id: GO:0005354
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106597],"is_not":false,"summary":null,"term":"GO:0005354"}]},"cv_name":"molecular_function","definition":"Enables the transfer of galactose from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["RHEA:34915","ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"galactose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"}],"termid":"GO:0005354","terms_by_termid":{"GO:0005354":null}}


id: GO:0090311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein deacetylation","synonyms":[{"name":"regulation of protein amino acid deacetylation","type":"exact"}],"termid":"GO:0090311"}


id: PBO:0046462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphycan","termid":"PBO:0046462"}


id: GO:0102507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-4-hydroxybenzoyl-beta-D-glucose = cyanidin 3,7-di-O-beta-D-glucoside betaine + 4-hydroxybenzoic acid + H+.","definition_xrefs":["EC:2.4.1.300","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 7-O-glucosyltransferase (hydroxybenzoly-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14434"],"termid":"GO:0102507"}


id: PBO:0015219
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SEC14","termid":"PBO:0015219"}


id: PBO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 83","termid":"PBO:0071081"}


id: PBO:0046880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A5, pseudogene","termid":"PBO:0046880"}


id: PBO:0011477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog Far8","termid":"PBO:0011477"}


id: GO:0052358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont glucan (obsolete GO:0052358)","termid":"GO:0052358"}


id: PBO:0017510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, ubiquitin-protein ligase E3, Sea4 (predicted)","termid":"PBO:0017510"}


id: PBO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.15","termid":"PBO:0004531"}


id: PATO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000065 relative percentage (obsolete PATO:0000065)","termid":"PATO:0000065"}


id: PBO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0035746"}


id: PBO:0061900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor delta 1","termid":"PBO:0061900"}


id: GO:0034332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:mah","GOC:aruk","GOC:bc","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction organization","synonyms":[{"name":"adherens junction organisation","type":"exact"}],"termid":"GO:0034332"}


id: PBO:0031020
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_vegetative_growth","termid":"PBO:0031020"}


id: GO:0034012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD = AMP + riboflavin cyclic-4',5'-phosphate.","definition_xrefs":["EC:4.6.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824","GO:0009975"],"is_obsolete":false,"name":"FAD-AMP lyase (cyclizing) activity","secondary_identifiers":["RHEA:13729"],"synonyms":[{"name":"FAD AMP-lyase (cyclic-FMN-forming) activity","type":"related"},{"name":"FAD AMP-lyase (riboflavin-cyclic-4',5'-phosphate-forming) activity","type":"related"},{"name":"FMN cyclase activity","type":"related"}],"termid":"GO:0034012"}


id: GO:0003990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylcholine + H2O = choline + acetate.","definition_xrefs":["EC:3.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholinesterase activity","termid":"GO:0004104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acetylcholinesterase activity","secondary_identifiers":["MetaCyc:ACETYLCHOLINESTERASE-RXN","RHEA:17561","Reactome:R-HSA-372519"],"synonyms":[{"name":"AcCholE","type":"related"},{"name":"acetyl.beta-methylcholinesterase activity","type":"related"},{"name":"acetylcholine acetylhydrolase activity","type":"related"},{"name":"acetylcholine hydrolase activity","type":"related"},{"name":"acetylthiocholinesterase activity","type":"related"},{"name":"choline esterase I activity","type":"related"},{"name":"true cholinesterase activity","type":"related"}],"termid":"GO:0003990"}


id: PBO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.78","termid":"PBO:0001364"}


id: PBO:0078721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 1-1","termid":"PBO:0078721"}


id: GO:0050978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an electrical stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. Movement in a magnetic field results in an induced electric field, which can be perceived by organisms such as elasmobranch fish.","definition_xrefs":["GOC:ai","Wikipedia:Magnetoception","PMID:15886990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of electrical stimulus","termid":"GO:0050952"},{"relation_name":"is_a","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception by sensory perception of electrical stimulus","synonyms":[{"name":"magnetoreception by electrical stimulus","type":"exact"},{"name":"magnetoreception through electrical stimulus","type":"exact"},{"name":"magnetoreception, sensory perception of electrical stimulus","type":"exact"},{"name":"magnetoreception, using electrical stimulus","type":"exact"}],"termid":"GO:0050978"}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: PBO:0073438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFI1 centrin binding protein","termid":"PBO:0073438"}


id: GO:0048500
data:
  {"annotated_genes":["SJAG_01840","SJAG_01282","SJAG_03411","SJAG_01759","SJAG_03684","SJAG_02456"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112010,87159,110418,112734,86360,111191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005786"}]},"cv_name":"cellular_component","definition":"A complex of protein and RNA which facilitates translocation of proteins across membranes.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Signal_recognition_particle"],"termid":"GO:0048500","terms_by_termid":{"GO:0005786":null}}


id: PBO:0050367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 70","termid":"PBO:0050367"}


id: PBO:0057531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 647","termid":"PBO:0057531"}


id: GO:0014064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of serotonin.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of serotonin secretion","termid":"GO:0014062"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"serotonin secretion","termid":"GO:0001820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of serotonin secretion","synonyms":[{"name":"activation of serotonin secretion","type":"narrow"},{"name":"positive regulation of serotonin release","type":"related"},{"name":"stimulation of serotonin secretion","type":"narrow"},{"name":"up regulation of serotonin secretion","type":"exact"},{"name":"up-regulation of serotonin secretion","type":"exact"},{"name":"upregulation of serotonin secretion","type":"exact"}],"termid":"GO:0014064"}


id: GO:0080070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-methylthiooctyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 8-methylthiooctyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4333"],"termid":"GO:0080070"}


id: PBO:0031806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_at_mitotic_metaphase/anaphase_transition","termid":"PBO:0031806"}


id: PR:O94312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp2 gene.","definition_xrefs":["UniProtKB:O94312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.07c","synonyms":[{"name":"Spom972h-pdp2","type":"exact"}],"termid":"PR:O94312"}


id: GO:0032136
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93899],"is_not":false,"summary":null,"term":"GO:0032136"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/C mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"adenine/cytosine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"A/C mispair binding","type":"exact"},{"name":"C/A mispair binding","type":"exact"},{"name":"cytosine/adenine mispair binding","type":"related"}],"termid":"GO:0032136","terms_by_termid":{"GO:0032136":null}}


id: PBO:0043014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKB-CPT1B readthrough (NMD candidate)","termid":"PBO:0043014"}


id: FYPO:0006697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular methionine level","synonyms":[{"name":"increased cellular L-methionine level","type":"exact"},{"name":"increased cellular methionine level during mitotic cell cycle","type":"related"},{"name":"increased cellular methionine level during vegetative growth","type":"exact"},{"name":"increased level of methionine in cell","type":"exact"},{"name":"induced cellular methionine level","type":"exact"}],"termid":"FYPO:0006697"}


id: PBO:0055646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3085","termid":"PBO:0055646"}


id: PBO:0003646
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDG-Ii","termid":"PBO:0003646"}


id: GO:0005945
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100306],"is_not":false,"summary":null,"term":"GO:0005945"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses 6-phosphofructokinase activity; homodimeric, homooctameric, and allosteric homotetrameric forms are known.","definition_xrefs":["GOC:vw","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"6-phosphofructokinase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005945","terms_by_termid":{"GO:0005945":null}}


id: PBO:0061106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family CARD domain containing 4","termid":"PBO:0061106"}


id: PBO:0057194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR365B and MIR4725 host gene","termid":"PBO:0057194"}


id: PBO:0088950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating enzyme Atg10","termid":"PBO:0088950"}


id: GO:1990473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ciliary targeting sequence, a specific peptide sequence that acts as a signal to localize a membrane protein to the ciliary membrane.","definition_xrefs":["PMID:20603001","PMID:18256283","PMID:19575670","GOC:krc","PMID:20697559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005048","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ciliary targeting signal binding","synonyms":[{"name":"CTS binding","type":"exact"}],"termid":"GO:1990473"}


id: PBO:0047535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 1","termid":"PBO:0047535"}


id: PBO:0031733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_meiosis","termid":"PBO:0031733"}


id: PATO:0000671
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000671 water value (obsolete PATO:0000671)","termid":"PATO:0000671"}


id: PBO:0030522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_assembly","termid":"PBO:0030522"}


id: PBO:0066655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 3","termid":"PBO:0066655"}


id: PR:Q9P6N6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 38 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 38 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.10c","secondary_identifiers":["UniProtKB:Q9P6N6"],"synonyms":[{"name":"Spom972h-SLC25A38","type":"exact"}],"termid":"PR:Q9P6N6"}


id: GO:1900552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving asperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"asperfuranone metabolic process","synonyms":[{"name":"asperfuranone metabolism","type":"exact"}],"termid":"GO:1900552"}


id: PBO:0067243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 316, pseudogene","termid":"PBO:0067243"}


id: PBO:0047523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free fatty acid receptor 3","termid":"PBO:0047523"}


id: GO:0009685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gibberellin metabolic process","synonyms":[{"name":"gibberellic acid metabolic process","type":"narrow"},{"name":"gibberellic acid metabolism","type":"narrow"},{"name":"gibberellin metabolism","type":"exact"}],"termid":"GO:0009685"}


id: PR:O36014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartyl aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10761:SF2","OMA:SCHPO02005","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.02","secondary_identifiers":["UniProtKB:O36014"],"synonyms":[{"name":"Spom972h-DNPEP","type":"exact"}],"termid":"PR:O36014"}


id: GO:0080071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indol-3-yl-methyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = indol-3-yl-methyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-1443"],"termid":"GO:0080071"}


id: PBO:0038964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin 5 (putative)","termid":"PBO:0038964"}


id: PBO:0076864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 13B","termid":"PBO:0076864"}


id: GO:0034465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon monoxide (CO) stimulus.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon monoxide","termid":"GO:0034465"}


id: GO:0047118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dioxo-6-phenylhexanoate + NADP+ = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H+ + NADPH.","definition_xrefs":["EC:1.3.1.40","RHEA:24268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate reductase activity","secondary_identifiers":["KEGG_REACTION:R03463","MetaCyc:1.3.1.40-RXN"],"synonyms":[{"name":"2,6-dioxo-6-phenylhexanoate:NADP+ delta2-oxidoreductase activity","type":"related"},{"name":"2-hydroxy-6-oxo-phenylhexa-2,4-dienoate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"}],"termid":"GO:0047118"}


id: PBO:0028324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028324"}


id: PBO:0054385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1781","termid":"PBO:0054385"}


id: MOD:01292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00075. Map to MOD:00075.","definition_xrefs":["Unimod:529"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01292 dimethylation of proline residue (obsolete MOD:01292)","synonyms":[{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethylation of proline residue","type":"related"}],"termid":"MOD:01292"}


id: PBO:0054879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2293","termid":"PBO:0054879"}


id: GO:0071743
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgE immunoglobulin complex","termid":"GO:0071742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"IgE immunoglobulin complex, circulating","synonyms":[{"name":"IgE antibody","type":"exact"}],"termid":"GO:0071743"}


id: FYPO:0001057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal amino acid import","synonyms":[{"name":"abnormal amino acid import across plasma membrane","type":"exact"},{"name":"abnormal amino acid import into cell","type":"exact"},{"name":"abnormal amino acid uptake","type":"exact"}],"termid":"FYPO:0001057"}


id: SO:0000890
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is post translationally regulated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"post_translationally_regulated","termid":"SO:0000130"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post_translationally_regulated_gene","synonyms":[{"name":"post translationally regulated gene","type":"exact"}],"termid":"SO:0000890"}


id: PBO:0081814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 7, Y-linked","termid":"PBO:0081814"}


id: PBO:0042393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member g","termid":"PBO:0042393"}


id: PBO:0082216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 5 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit zeta","termid":"PBO:0082216"}


id: PBO:0028729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylcysteine_sulfoxide_level","termid":"PBO:0028729"}


id: FYPO:0005890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to calcium ion","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to calcium ion","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005890"}


id: GO:0097430
data:
  {"annotated_genes":["SJAG_03079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97271],"is_not":false,"summary":null,"term":"GO:0097430"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions from outside of a cell, across an ascospore-type prospore membrane and into the cytosol.","definition_xrefs":["GOC:vw","PMID:21828039","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03079":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"copper ion import across prospore membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper ion import into ascospore-type prospore","type":"related"},{"name":"copper ion transport into forespores","type":"related"}],"termid":"GO:0097430","terms_by_termid":{"GO:0097430":null}}


id: PBO:0045500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 3","termid":"PBO:0045500"}


id: GO:0007580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance, as cells age, of circular DNA molecules that originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and replicated independently of chromosomal replication.","definition_xrefs":["PMID:9891807","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA accumulation involved in cell aging (obsolete GO:0007580)","synonyms":[{"name":"extrachromosomal circular DNA accumulation during cell ageing","type":"related"},{"name":"extrachromosomal circular DNA accumulation during cell aging","type":"related"}],"termid":"GO:0007580"}


id: PBO:0088836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup82","termid":"PBO:0088836"}


id: GO:1905030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any voltage-gated ion channel activity that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["ISBN:9780071120005","GOC:TermGenie","GO_REF:0000061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"voltage gated ion channel activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"voltage gated ion channel activity involved in regulation of postsynaptic membrane potential","type":"exact"},{"name":"voltage-dependent ion channel activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"voltage-dependent ion channel activity involved in regulation of postsynaptic membrane potential","type":"exact"},{"name":"voltage-gated ion channel activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"voltage-gated ion channel activity involved in regulation of postsynaptic membrane potential","type":"broad"}],"termid":"GO:1905030"}


id: PBO:0066116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 10 member B","termid":"PBO:0066116"}


id: MOD:00160
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-glycosyl-L-asparagine.","definition_xrefs":["PubMed:5490222","PubMed:111247","RESID:AA0151#var","PubMed:1694179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-glycosyl-L-asparagine","synonyms":[{"name":"N4GlycoAsn","type":"exact"}],"termid":"MOD:00160"}


id: PBO:0003626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucan synthesis-associated protein (predicted)","termid":"PBO:0003626"}


id: PBO:0082914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome b2 (L-lactate cytochrome-c oxidoreductase); component of the mitochondrial intermembrane space, required for lactate utilization; expression is repressed by glucose and anaerobic conditions","termid":"PBO:0082914"}


id: PBO:0065902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB43 pseudogene 1","termid":"PBO:0065902"}


id: PBO:0005628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-Mg/Pi carrier (predicted)","termid":"PBO:0005628"}


id: GO:1904444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of Sertoli cell barrier.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18057314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"establishment of Sertoli cell barrier","termid":"GO:0097368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of Sertoli cell barrier","synonyms":[{"name":"regulation of establishment of BTB","type":"exact"},{"name":"regulation of establishment of SCB","type":"exact"},{"name":"regulation of establishment of blood-testis barrier","type":"exact"}],"termid":"GO:1904444"}


id: GO:0036368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes required for a cone photoreceptor to recover, following light activation, so that it can respond to a subsequent light stimulus. Cone recovery requires the shutoff of active participants in the phototransduction cascade, including the visual pigment and downstream signal transducers.","definition_xrefs":["GOC:gap","PMID:22802362","PMID:16039565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cone photoresponse recovery","synonyms":[{"name":"cone phototransduction termination","type":"related"},{"name":"cone response recovery","type":"exact"}],"termid":"GO:0036368"}


id: GO:0033739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-aminomethyl-7-deazaguanine + 2 NADP+ = 7-cyano-7-deazaguanine + 3 H+ + 2 NADPH.","definition_xrefs":["RHEA:13409","EC:1.7.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"preQ1 synthase activity","secondary_identifiers":["MetaCyc:RXN0-4022","KEGG_REACTION:R07605"],"synonyms":[{"name":"7-aminomethyl-7-carbaguanine:NADP+ oxidoreductase activity","type":"exact"},{"name":"7-cyano-7-deazaguanine reductase activity","type":"related"},{"name":"QueF","type":"related"},{"name":"YkvM","type":"related"},{"name":"preQ0 oxidoreductase activity","type":"related"},{"name":"preQ0 reductase activity","type":"related"},{"name":"queuine synthase activity","type":"related"},{"name":"queuine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0033739"}


id: GO:0010415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the mannan backbone, the unsubstituted polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"unsubstituted mannan metabolic process","synonyms":[{"name":"unsubstituted mannan metabolism","type":"exact"}],"termid":"GO:0010415"}


id: PBO:0058832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8062","termid":"PBO:0058832"}


id: PBO:0061294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein, coactivator of histone transcription","termid":"PBO:0061294"}


id: PBO:0071998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7","termid":"PBO:0071998"}


id: FYPO:0003376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to nitrogen starvation. Cells go on to grow and divide to a greater extent than wild type following nitrogen starvation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to nitrogen starvation","synonyms":[{"name":"increased cell population growth during cellular response to nitrogen starvation","type":"exact"},{"name":"increased growth during cellular response to nitrogen starvation","type":"exact"},{"name":"resistance to nitrogen depletion","type":"exact"},{"name":"resistance to nitrogen deprivation","type":"exact"},{"name":"resistance to nitrogen starvation during mitotic cell cycle","type":"related"},{"name":"resistance to nitrogen starvation during vegetative growth","type":"exact"},{"name":"resistant to nitrogen starvation","type":"exact"}],"termid":"FYPO:0003376"}


id: GO:0060272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of skeletal joints are generated and organized during the embryonic phase. A skeletal joint is the connecting structure between the bones of the skeleton.","definition_xrefs":["UBERON:0000982","GOC:BHF","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system morphogenesis","termid":"GO:0048704"},{"relation_name":"part_of","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal joint morphogenesis","termid":"GO:0060272"}


id: PBO:0075739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 54","termid":"PBO:0075739"}


id: GO:0031768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ghrelin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"ghrelin receptor binding","synonyms":[{"name":"ghrelin receptor ligand","type":"narrow"},{"name":"type 1 growth hormone secretagogue GH-releasing peptide receptor binding","type":"exact"}],"termid":"GO:0031768"}


id: GO:1990129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein-DNA complex involved in replication restart after a stalled replication fork has been repaired.","definition_xrefs":["GOC:bhm","PMID:17139333"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-primosome complex involved in replication restart (obsolete GO:1990129)","synonyms":[{"name":"pre-primosome complex involved in replication restart","type":"exact"}],"termid":"GO:1990129"}


id: PBO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS3 and NABP interacting protein","termid":"PBO:0051684"}


id: FYPO:0000858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of heterochromatin is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nucleosome positioning in heterochromatin","synonyms":[{"name":"normal nucleosome occupancy in heterochromatin","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing in heterochromatin","type":"exact"}],"termid":"FYPO:0000858"}


id: GO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA triple helix. The formation of triple helical DNA has been evoked in several cellular processes including transcription, replication, and recombination.","definition_xrefs":["PMID:10681538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"triplex DNA binding","termid":"GO:0045142"}


id: PBO:0063889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P pseudogene 2","termid":"PBO:0063889"}


id: GO:1901557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fenofibrate stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fenofibrate","termid":"GO:1901557"}


id: PR:Q9HGP7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.08c gene.","definition_xrefs":["UniProtKB:Q9HGP7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C212.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.08c","synonyms":[{"name":"Spom972h-SPAC212.08c","type":"exact"}],"termid":"PR:Q9HGP7"}


id: PBO:0051317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR9-1 (pseudogene)","termid":"PBO:0051317"}


id: PBO:0057758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1972-1","termid":"PBO:0057758"}


id: GO:0033209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by tumor necrosis factor binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to tumor necrosis factor","termid":"GO:0071356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"adipocytokine signaling pathway","type":"related"},{"name":"tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0033209"}


id: PBO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.12","termid":"PBO:0003249"}


id: PBO:0044895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPP autophagy regulator 1","termid":"PBO:0044895"}


id: PBO:0017550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1","termid":"PBO:0017550"}


id: PBO:0078612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64C","termid":"PBO:0078612"}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_00212","SJAG_00516","SJAG_01913","SJAG_02023","SJAG_01471","SJAG_04955","SJAG_00136","SJAG_01447","SJAG_04015","SJAG_02782","SJAG_03406","SJAG_05294","SJAG_01397","SJAG_01817"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83507,85357,85684,87603,91337,92316,94666,95688,95766,97429,98473,99753,105812,114818],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: PBO:0053153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 2","termid":"PBO:0053153"}


id: PBO:0110326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOC antisense RNA 1","termid":"PBO:0110326"}


id: PBO:0087857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator in nitrogen catabolite repression system; localization and activity regulated by quality of nitrogen source and Ure2p; full-length protein forms prion-like aggregates when overproduced","termid":"PBO:0087857"}


id: PBO:0059706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 14","termid":"PBO:0059706"}


id: GO:0102283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: C20 sphinganine(1+) + NADP = C20 3-dehydrosphinganine(1+) + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-ketodihydrosphinganine (C20) reductase activity (obsolete GO:0102283)","termid":"GO:0102283"}


id: PBO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapidly internalised","termid":"PBO:0002419"}


id: PBO:0072583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 1B","termid":"PBO:0072583"}


id: GO:0160137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2457) in 23S rRNA = pseudouridine(2457) in 23S rRNA.","definition_xrefs":["EC:5.4.99.20","RHEA:38871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2457) synthase activity","termid":"GO:0160137"}


id: PBO:0058377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4749","termid":"PBO:0058377"}


id: PBO:0045105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in malignant brain tumors 1 like 1 (pseudogene)","termid":"PBO:0045105"}


id: GO:0051610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serotonin into a cell, typically presynaptic neurons or glial cells. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin transport","termid":"GO:0006837"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"serotonin uptake","synonyms":[{"name":"5-HT uptake","type":"exact"},{"name":"5-hydroxytryptamine uptake","type":"exact"},{"name":"5HT uptake","type":"exact"},{"name":"serotonin import","type":"exact"}],"termid":"GO:0051610"}


id: PBO:0108525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper like post translational regulator 1","termid":"PBO:0108525"}


id: PBO:0085629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress by acting along with Nfu1p at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to mitochondrial client proteins like lipoate synthase and succinate dehydrogenase; sequence similarity to human BOLA family member, BOLA3, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS2)","termid":"PBO:0085629"}


id: PBO:0029326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_at_mating_type_locus_during_mitotic_S_phase","termid":"PBO:0029326"}


id: PBO:0034486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_lipid_metabolism_gene_mRNA_during_cellular_response_to_hypoxia","termid":"PBO:0034486"}


id: GO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + AH2 + O2 = a 17a-hydroxysteroid + A + H2O.","definition_xrefs":["EC:1.14.14.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"steroid 17-alpha-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-193099","Reactome:R-HSA-5601843","Reactome:R-HSA-193068","Reactome:R-HSA-9035954","Reactome:R-HSA-9035956","Reactome:R-HSA-193070","MetaCyc:STEROID-17-ALPHA-MONOOXYGENASE-RXN","Reactome:R-HSA-193072"],"synonyms":[{"name":"17alpha-hydroxylase-C17,20 lyase activity","type":"related"},{"name":"cytochrome P-450 (P-45017alpha,lyase)","type":"related"},{"name":"cytochrome P450 CYP17","type":"narrow"},{"name":"cytochrome P45017alpha","type":"related"},{"name":"cytochrome p450 XVIIA1 activity","type":"narrow"},{"name":"steroid 17-alpha-hydroxylase activity","type":"exact"},{"name":"steroid 17-alpha-hydroxylase-C17-20 lyase activity","type":"exact"},{"name":"steroid 17-alpha-hydroxylase/17,20 lyase activity","type":"related"},{"name":"steroid 17alpha-hydroxylase activity","type":"related"},{"name":"steroid 17alpha-monooxygenase activity","type":"related"},{"name":"steroid 17alphahydroxylase/17,20 lyase activity","type":"related"},{"name":"steroid,hydrogen-donor:oxygen oxidoreductase (17alpha-hydroxylating)","type":"related"}],"termid":"GO:0004508"}


id: GO:0000791
data:
  {"annotated_genes":["SJAG_03161","SJAG_02416","SJAG_03689","SJAG_01717","SJAG_00342","SJAG_03844","SJAG_03047","SJAG_00471","SJAG_03567","SJAG_03126","SJAG_03832","SJAG_02849","SJAG_03128"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89972,98198,99238,101224,102065,102140,107228,107933,108022,108077,109411,109636,112059],"is_not":false,"summary":null,"term":"GO:0000791"}]},"cv_name":"cellular_component","definition":"A dispersed and relatively uncompacted form of chromatin that is in a transcription-competent conformation.","definition_xrefs":["PMID:32017156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00342":null,"SJAG_00471":null,"SJAG_01717":null,"SJAG_02416":null,"SJAG_02849":null,"SJAG_03047":null,"SJAG_03126":null,"SJAG_03128":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03689":null,"SJAG_03832":null,"SJAG_03844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"euchromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao445485807","GO:0005719","Wikipedia:Euchromatin","GO:0035327"],"synonyms":[{"name":"nuclear euchromatin","type":"related"},{"name":"transcriptionally active chromatin","type":"exact"}],"termid":"GO:0000791","terms_by_termid":{"GO:0000791":null}}


id: PBO:0076781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEA domain transcription factor 4","termid":"PBO:0076781"}


id: FYPO:0001377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"decreased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"decreased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"decreased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001377"}


id: PBO:0001217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyltransferase I alpha subunit Cwp1","termid":"PBO:0001217"}


id: PBO:0055532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2967","termid":"PBO:0055532"}


id: PBO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4 (predicted)","termid":"PBO:0003327"}


id: PBO:0005667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Spc19","termid":"PBO:0005667"}


id: PBO:0046577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 19, envelope","termid":"PBO:0046577"}


id: GO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of sodium ions across a membrane. The complex comprises a membrane sector (F0 or V0) that carries out ion transport and a cytoplasmic compartment sector (F1 or V1) that catalyzes ATP synthesis or hydrolysis.","definition_xrefs":["PMID:14656431","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium ion-transporting two-sector ATPase complex","synonyms":[{"name":"sodium-transporting two-sector ATPase complex","type":"exact"}],"termid":"GO:0016472"}


id: PBO:0062859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoraplin","termid":"PBO:0062859"}


id: PBO:0087413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; homologous to bovine subunit OSCP (oligomycin sensitivity-conferring protein); phosphorylated","termid":"PBO:0087413"}


id: PBO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase I Gls1 (predicted)","termid":"PBO:0001947"}


id: PR:O94574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase C1773.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.17c","synonyms":[{"name":"Spom972h-SPBC1773.17c","type":"exact"}],"termid":"PR:O94574"}


id: GO:1901535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA demethylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA demethylation","termid":"GO:0080111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA demethylation","termid":"GO:1901535"}


id: PBO:0072964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCG5 antisense RNA 1","termid":"PBO:0072964"}


id: GO:1902576
data:
  {"annotated_genes":["SJAG_02162","SJAG_03048","SJAG_01210","SJAG_01068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104816,112946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[98165,104817,93490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear cell cycle DNA replication.","definition_xrefs":["PMID:19033384","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication during S phase","type":"related"},{"name":"down regulation of DNA replication involved in S phase","type":"exact"},{"name":"down regulation of DNA replication involved in S-phase","type":"exact"},{"name":"down regulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"down-regulation of DNA replication during S phase","type":"related"},{"name":"down-regulation of DNA replication involved in S phase","type":"exact"},{"name":"down-regulation of DNA replication involved in S-phase","type":"exact"},{"name":"down-regulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"downregulation of DNA replication during S phase","type":"related"},{"name":"downregulation of DNA replication involved in S phase","type":"exact"},{"name":"downregulation of DNA replication involved in S-phase","type":"exact"},{"name":"downregulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"inhibition of DNA replication during S phase","type":"related"},{"name":"inhibition of DNA replication involved in S phase","type":"narrow"},{"name":"inhibition of DNA replication involved in S-phase","type":"narrow"},{"name":"inhibition of nuclear cell cycle DNA replication","type":"narrow"},{"name":"negative regulation of DNA replication during S phase","type":"related"},{"name":"negative regulation of DNA replication involved in S phase","type":"exact"},{"name":"negative regulation of DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902576","terms_by_termid":{"GO:1903464":null,"GO:1903467":null}}


id: GO:0032484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the RaI subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Ral protein signal transduction","termid":"GO:0032484"}


id: GO:0021830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of interneurons from the subpallium to the cortex during forebrain development.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}


id: MOD:00053
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N-acetyl-L-glutamic acid.","definition_xrefs":["PubMed:6725286","ChEBI:17533","RESID:AA0044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-glutamic acid","synonyms":[{"name":"(2S)-2-(acetamido)pentanedioic acid","type":"exact"},{"name":"2-(acetylamino)pentanedioic acid","type":"exact"},{"name":"2-(acetylazanyl)pentanedioic acid","type":"exact"},{"name":"AcGlu","type":"exact"},{"name":"MOD_RES N-acetylglutamate","type":"exact"},{"name":"N-acetyl-L-glutamic acid","type":"exact"},{"name":"N-acetylated L-glutamic acid","type":"exact"},{"name":"acetylglutamic acid","type":"exact"}],"termid":"MOD:00053"}


id: PBO:0092017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glycine (ucc), mitochondrial","termid":"PBO:0092017"}


id: GO:0044095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of a host cell's nuclear content other than the chromosomes or the nucleolus. The host is the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleoplasm","termid":"GO:0044095"}


id: PBO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during","termid":"PBO:0006170"}


id: PBO:0031682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_peroxisome_degradation","termid":"PBO:0031682"}


id: PATO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000725 function value (obsolete PATO:0000725)","termid":"PATO:0000725"}


id: GO:0046200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of m-cresol (3-hydroxytoluene), the meta-isoform of cresol.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete m-cresol biosynthetic process (obsolete GO:0046200)","synonyms":[{"name":"m-cresol anabolism","type":"exact"},{"name":"m-cresol biosynthesis","type":"exact"},{"name":"m-cresol biosynthetic process","type":"exact"},{"name":"m-cresol formation","type":"exact"},{"name":"m-cresol synthesis","type":"exact"}],"termid":"GO:0046200"}


id: PBO:0039290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG5 dolichyl-phosphate beta-glucosyltransferase","termid":"PBO:0039290"}


id: PBO:0052070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 14","termid":"PBO:0052070"}


id: PBO:0085864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has sequence and structural similarity to flavodoxins; predicted to be palmitoylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085864"}


id: PBO:0039003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFDN divergent transcript","termid":"PBO:0039003"}


id: GO:0021852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a pyramidal neuron precursor from the ventricular zone to the correct layer of the cerebral cortex.","definition_xrefs":["GOC:dph","PMID:12626695","GOC:cls","GOC:dgh","PMID:22192824","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"},{"relation_name":"is_a","term_name":"radial glia-guided pyramidal neuron migration","termid":"GO:0140650"},{"relation_name":"part_of","term_name":"pyramidal neuron development","termid":"GO:0021860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramidal neuron migration to cerebral cortex","synonyms":[{"name":"projection neuron migration","type":"related"},{"name":"pyramidal neuron migration","type":"broad"}],"termid":"GO:0021852"}


id: PBO:0108934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLEKHB2 pseudogene 1","termid":"PBO:0108934"}


id: FYPO:0000786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a higher frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased plasmid loss","synonyms":[{"name":"increased plasmid loss during mitotic cell cycle","type":"related"},{"name":"increased plasmid loss during vegetative growth","type":"exact"}],"termid":"FYPO:0000786"}


id: PBO:0011101
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription repressed by copper","termid":"PBO:0011101"}


id: PBO:0066521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repulsive guidance molecule BMP co-receptor b","termid":"PBO:0066521"}


id: PR:P30261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.02c","synonyms":[{"name":"Spom972h-cdc27","type":"exact"},{"name":"cell division control protein 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30261"}


id: GO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a natural killer cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"},{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"natural killer cell cytokine production","synonyms":[{"name":"NK cell cytokine production","type":"exact"}],"termid":"GO:0002370"}


id: FYPO:0002526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to latrunculin B. Cells stop growing (and may die) at a concentration of latrunculin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to latrunculin B","synonyms":[{"name":"hypersensitive to latrunculin B","type":"exact"},{"name":"sensitive to LatB","type":"exact"},{"name":"sensitive to latrunculin B during mitotic cell cycle","type":"related"},{"name":"sensitive to latrunculin B during vegetative growth","type":"exact"}],"termid":"FYPO:0002526"}


id: GO:0004238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of protein and peptide substrates preferentially on carboxyl side of hydrophobic residues.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete meprin A activity (obsolete GO:0004238)","synonyms":[{"name":"N-benzoyl-L-tyrosyl-p-aminobenzoic acid hydrolase activity","type":"related"},{"name":"PABA-peptide hydrolase activity","type":"related"},{"name":"PPH","type":"related"},{"name":"endopeptidase-2 activity","type":"broad"},{"name":"meprin","type":"related"},{"name":"meprin A activity","type":"exact"},{"name":"meprin-a","type":"related"}],"termid":"GO:0004238"}


id: PBO:0060919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 6","termid":"PBO:0060919"}


id: FYPO:0003093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which small RNA molecules physically associated with the Argonaute protein (Ago1) are longer than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"increased Argonaute-associated RNA length","synonyms":[{"name":"increased Argonaute-associated priRNA length","type":"narrow"},{"name":"increased Argonaute-associated siRNA length","type":"narrow"},{"name":"increased length of Ago1-associated RNA","type":"narrow"},{"name":"increased length of Argonaute-associated RNA","type":"exact"},{"name":"increased length of Argonaute-associated small RNA","type":"exact"}],"termid":"FYPO:0003093"}


id: GO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the olfactory nerve is generated and organized. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve morphogenesis","synonyms":[{"name":"CN I morphogenesis","type":"related"}],"termid":"GO:0021627"}


id: MOD:01990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a glycinium (protonated glycine).","definition_xrefs":["ChEBI:64723","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated glycine (glycinium) residue","termid":"MOD:01990"}


id: SO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_C_cluster","synonyms":[{"name":"V DJ C cluster","type":"exact"},{"name":"V-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000542"}


id: PBO:0058201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4494","termid":"PBO:0058201"}


id: SO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region at a non-allelic position where exchange of genetic material happens as a result of homologous recombination.","direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_hotspot","termid":"SO:0000339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_allelic_homologous_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:non_allelic_homologous","type":"exact"},{"name":"INSDC_qualifier:non_allelic_homologous_recombination","type":"exact"},{"name":"NAHRR","type":"exact"},{"name":"non allelic homologous recombination region","type":"exact"}],"termid":"SO:0002094"}


id: PBO:0076597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 19","termid":"PBO:0076597"}


id: PBO:0083888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of nuclear pore complex (NPC); also part of the NPC nuclear basket; contributes directly to nucleocytoplasmic transport; involved in regulation of transcription and mitosis; induces membrane tubulation, which may contribute to nuclear pore assembly; NUP53 has a paralog, ASM4, that arose from the whole genome duplication","termid":"PBO:0083888"}


id: GO:1901094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein homooligomerization","termid":"GO:0032463"},{"relation_name":"is_a","term_name":"negative regulation of protein tetramerization","termid":"GO:1901091"},{"relation_name":"is_a","term_name":"regulation of protein homotetramerization","termid":"GO:1901093"},{"relation_name":"negatively_regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of protein homotetramerization","synonyms":[{"name":"down regulation of protein homotetramer assembly","type":"exact"},{"name":"down regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"down regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"down regulation of protein homotetramer formation","type":"exact"},{"name":"down regulation of protein homotetramerization","type":"exact"},{"name":"down-regulation of protein homotetramer assembly","type":"exact"},{"name":"down-regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"down-regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"down-regulation of protein homotetramer formation","type":"exact"},{"name":"down-regulation of protein homotetramerization","type":"exact"},{"name":"downregulation of protein homotetramer assembly","type":"exact"},{"name":"downregulation of protein homotetramer biosynthesis","type":"exact"},{"name":"downregulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"downregulation of protein homotetramer formation","type":"exact"},{"name":"downregulation of protein homotetramerization","type":"exact"},{"name":"inhibition of protein homotetramer assembly","type":"narrow"},{"name":"inhibition of protein homotetramer biosynthesis","type":"narrow"},{"name":"inhibition of protein homotetramer biosynthetic process","type":"narrow"},{"name":"inhibition of protein homotetramer formation","type":"narrow"},{"name":"inhibition of protein homotetramerization","type":"narrow"},{"name":"negative regulation of protein homotetramer assembly","type":"exact"},{"name":"negative regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"negative regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"negative regulation of protein homotetramer formation","type":"exact"}],"termid":"GO:1901094"}


id: PATO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's being placed alternately one above the other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate placement","termid":"PATO:0001932"}


id: PBO:0059900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 23","termid":"PBO:0059900"}


id: GO:0140347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of N-retinylidene-N-retinylphosphatidylethanolamine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:10412977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"N-retinylidene-phosphatidylethanolamine flippase activity","synonyms":[{"name":"N-retinylidene-phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"}],"termid":"GO:0140347"}


id: GO:0051871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dihydrofolic acid, a folic acid in which the bicyclic pteridine structure is in the dihydro, partially reduced form; they are intermediates in folate metabolism and are reduced to their tetrahydro, reduced forms.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dihydrofolic acid binding","synonyms":[{"name":"DHF binding","type":"related"},{"name":"dihydrofolate binding","type":"related"}],"termid":"GO:0051871"}


id: PBO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 7","termid":"PBO:0072310"}


id: PBO:0004041
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.5","termid":"PBO:0004041"}


id: GO:0031105
data:
  {"annotated_genes":["SJAG_00663","SJAG_03688","SJAG_01277","SJAG_01769","SJAG_04470","SJAG_04375","SJAG_03374"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112048,101884,90146,95855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032152"},{"annotations":[96740,99760,93614,95858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032151"}]},"cv_name":"cellular_component","definition":"A protein complex containing septins. Typically, these complexes contain multiple septins and are oligomeric.","definition_xrefs":["GOC:mah","PMID:15385632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01277":null,"SJAG_01769":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_04375":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"septin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031105","terms_by_termid":{"GO:0032151":null,"GO:0032152":null}}


id: GO:0031551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of brain-derived neurotrophic factor-activated receptor activity","synonyms":[{"name":"regulation of BDNF receptor activity","type":"exact"},{"name":"regulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031551"}


id: GO:0007080
data:
  {"annotated_genes":["SJAG_01775","SJAG_04745","SJAG_03217","SJAG_00335","SJAG_00678","SJAG_00930","SJAG_04412","SJAG_01224","SJAG_05319","SJAG_04040","SJAG_02731","SJAG_01278","SJAG_03220","SJAG_00768","SJAG_05266","SJAG_04623","SJAG_04140","SJAG_02346","SJAG_04259","SJAG_00646","SJAG_03048","SJAG_03327","SJAG_02045","SJAG_01082","SJAG_03989","SJAG_01370","SJAG_01613","SJAG_02451","SJAG_01211","SJAG_05220","SJAG_03437","SJAG_01601","SJAG_00918","SJAG_00082","SJAG_03543","SJAG_01805","SJAG_01837","SJAG_01297","SJAG_02624","SJAG_04076","SJAG_02761","SJAG_02286","SJAG_00794","SJAG_03540","SJAG_01371","SJAG_00207","SJAG_04884","SJAG_00418","SJAG_00302","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105848,94356,110554,114223,83220,106254,112615,97115,86916,93623,90978,98232,96142,86526,91238,101328,83471,85560,107655,114749,106296,109829],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[104173],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[90420,105849],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[94977,99736,104177,89831,94359],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[97808,86514,112762,84640,109257,97809,96281,113015,109833,85253,89832,108612,98234,108614,84868,104809,89465,97810,94361,110151,99737,105833,99377,108613,94874,110559,94360,104178,114779,103399],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[98177,85515,89439,107158,112771],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[112776],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140273"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during mitotic chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase chromosome alignment","termid":"GO:0051310"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007080","terms_by_termid":{"GO:0051315":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140429":null,"GO:1990758":null,"GO:1990942":null}}


id: PBO:0030375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_adenine_starvation","termid":"PBO:0030375"}


id: PBO:0065826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6A, member RAS oncogene family","termid":"PBO:0065826"}


id: FYPO:0007145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5' deoxyribonuclease (pyrimidine dimer) activity is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal 5' deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","synonyms":[{"name":"normal 5' deoxyribonuclease (pyrimidine dimer) activity during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0007145"}


id: PBO:0059639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 5","termid":"PBO:0059639"}


id: GO:0051803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051803)","synonyms":[{"name":"down regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"negative regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051803"}


id: PBO:0056842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056842"}


id: GO:0044813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycolytic fermentation beginning with the anaerobic conversion of glucose to pyruvate by the glycolytic pathway, continuing with pyruvate:ferredoxin oxidoreductase (PFOR) activity. This pathway is found in strict anaerobes such as Clostridia species.","definition_xrefs":["GOC:mengo_curators","PMID:20395274","PMID:20692761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"glycolytic fermentation via PFOR pathway","secondary_identifiers":["MetaCyc:CENTFERM-PWY"],"termid":"GO:0044813"}


id: GO:0005014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRKA receptor activity (obsolete GO:0005014)","synonyms":[{"name":"neurotrophin TRKA receptor activity","type":"exact"}],"termid":"GO:0005014"}


id: GO:0097323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a B cell to another cell via adhesion molecules.","definition_xrefs":["GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"B cell adhesion","termid":"GO:0097323"}


id: PBO:0059167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPV17 mitochondrial inner membrane protein like 2","termid":"PBO:0059167"}


id: PBO:0058294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4668","termid":"PBO:0058294"}


id: FYECO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2,2'-dipyridyl was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2,2'-dipyridyl","synonyms":[{"name":"2,2'-dipyridyl added","type":"exact"}],"termid":"FYECO:0000409"}


id: PBO:0055773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNX1 antisense RNA 2","termid":"PBO:0055773"}


id: PBO:0077991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing","termid":"PBO:0077991"}


id: FYPO:0002341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint","synonyms":[{"name":"delayed mitotic DNA damage checkpoint deactivation","type":"exact"},{"name":"prolonged mitotic DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0002341"}


id: PBO:0003640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic forkhead transcription factor Mei4","termid":"PBO:0003640"}


id: PBO:0081972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2","termid":"PBO:0081972"}


id: PBO:0089241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human coilin ortholog Mug174","termid":"PBO:0089241"}


id: GO:0019615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol via the ortho-cleavage pathway, in which the catechol aromatic ring is broken between the two carbon atoms bearing hydroxyl groups.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"beta-ketoadipate pathway","termid":"GO:0042952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"catechol catabolic process, ortho-cleavage","secondary_identifiers":["MetaCyc:CATECHOL-ORTHO-CLEAVAGE-PWY"],"synonyms":[{"name":"catechol breakdown, ortho-cleavage","type":"exact"},{"name":"catechol degradation, ortho-cleavage","type":"exact"}],"termid":"GO:0019615"}


id: PBO:0017881
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itsy bitsy phosphatase","termid":"PBO:0017881"}


id: GO:0031375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity.","definition_xrefs":["ISBN:0716720094","GOC:mah","PMID:12957385","ISBN:0471331309"],"gene_count":0,"genotype_count":0,"name":"obsolete type II fatty acid synthase complex (obsolete GO:0031375)","synonyms":[{"name":"type II FAS","type":"exact"},{"name":"type II FAS complex","type":"exact"},{"name":"type II fatty acid synthase","type":"exact"},{"name":"type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031375"}


id: PBO:0084006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycine-tRNA synthetase, not expressed under normal growth conditions; expression is induced under heat, oxidative, pH, or ethanol stress conditions; more stable than the major glycine-tRNA synthetase Grs1p at 37 deg C; GRS2 has a paralog, GRS1, that arose from the whole genome duplication","termid":"PBO:0084006"}


id: PBO:0084773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein; probable minor component of the TOM (translocase of outer membrane) complex responsible for recognition and import of mitochondrially directed proteins; TOM71 has a paralog, TOM70, that arose from the whole genome duplication","termid":"PBO:0084773"}


id: _global:involved_in_positive_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' positively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_positive_regulation_of","secondary_identifiers":["RO:0002429"],"termid":"_global:involved_in_positive_regulation_of"}


id: PBO:0031600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase","termid":"PBO:0031600"}


id: SO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA including L-part1, V-intron and V-exon, with the 5' UTR and 3' UTR.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_gene_segment","synonyms":[{"name":"INSDC_feature:V_segment","type":"exact"},{"name":"V gene","type":"exact"},{"name":"V gene segment","type":"exact"},{"name":"V-GENE","type":"exact"},{"name":"variable_gene","type":"exact"}],"termid":"SO:0000466"}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: PBO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 6 pseudogene","termid":"PBO:0042631"}


id: PBO:0063682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 6","termid":"PBO:0063682"}


id: PBO:0030579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_glycine_level","termid":"PBO:0030579"}


id: GO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process evolved to enable an interaction with an organism of a different species.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interspecies interaction between organisms","synonyms":[{"name":"interaction with another species","type":"exact"},{"name":"interspecies interaction","type":"exact"},{"name":"interspecies interaction between organisms","type":"exact"},{"name":"interspecies interaction with other organisms","type":"exact"}],"termid":"GO:0044419"}


id: PBO:0088635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID, TFIIF, Ino80, SWI/SNF, and NuA4 complex YEATS family subunit Tfg3","termid":"PBO:0088635"}


id: PBO:0063063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PANK2 antisense RNA 1","termid":"PBO:0063063"}


id: PBO:0041532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 96","termid":"PBO:0041532"}


id: GO:0019809
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82865],"is_not":false,"summary":null,"term":"GO:0019809"}]},"cv_name":"molecular_function","definition":"Binding to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine binding","termid":"GO:0019808"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"spermidine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019809","terms_by_termid":{"GO:0019809":null}}


id: PR:P0CT57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1402 gene.","definition_xrefs":["UniProtKB:P0CT57","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.13","synonyms":[{"name":"Spom972h-rps1402","type":"exact"}],"termid":"PR:P0CT57"}


id: PBO:0052992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 4","termid":"PBO:0052992"}


id: PBO:0049541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 5","termid":"PBO:0049541"}


id: PBO:0031551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peptidase_activity","termid":"PBO:0031551"}


id: GO:1900478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sulfate assimilation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:7601277","PMID:7891681","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900478)","synonyms":[{"name":"activation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:1900478"}


id: PBO:0082267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation; activity regulated by TORC1 effectors, Npr1p and Par32p; human homolog RHCG complements yeast null mutant; mutations in human homolog RHCG implicated in metabolic acidosis; MEP1 has a paralog, MEP3, that arose from the whole genome duplication","termid":"PBO:0082267"}


id: GO:0052055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the function of a host protein via a direct interaction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host molecular function (obsolete GO:0052055)","synonyms":[{"name":"modification by symbiont of host molecular function","type":"exact"},{"name":"modification by symbiont of host protein function","type":"exact"}],"termid":"GO:0052055"}


id: GO:0009118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleoside metabolic process","synonyms":[{"name":"regulation of nucleoside metabolism","type":"exact"}],"termid":"GO:0009118"}


id: PBO:0082016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZW10 interacting kinetochore protein","termid":"PBO:0082016"}


id: PBO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene name conflict","termid":"PBO:0001338"}


id: FYPO:0005960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a mitotic spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PomBase:mah","PMID:15797925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"multipolar spindle","termid":"FYPO:0005959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000120","FYPO:0002399"],"is_obsolete":false,"name":"multipolar mitotic spindle","synonyms":[{"name":"multipolar spindle during mitosis","type":"exact"},{"name":"multipolar spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0005960"}


id: FYPO:0003866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell when the cell is in G0 phase is higher than normal. Total protein or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during G0","synonyms":[{"name":"increased protein accumulation during G0","type":"related"},{"name":"increased protein level during cell quiescence","type":"exact"},{"name":"increased protein level during quiescence","type":"exact"}],"termid":"FYPO:0003866"}


id: PBO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemojuvelin BMP co-receptor","termid":"PBO:0050008"}


id: PBO:0041577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 91","termid":"PBO:0041577"}


id: PBO:0039100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 4","termid":"PBO:0039100"}


id: GO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A protein to which cyclosporin A (an immunosuppressant) binds. Possesses peptidyl-prolyl isomerase activity.","definition_xrefs":["EC:5.2.1.8","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclophilin (obsolete GO:0004600)","synonyms":[{"name":"cyclophilin","type":"exact"}],"termid":"GO:0004600"}


id: GO:0061797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A gated channel activity that enables the transmembrane transfer of a chloride ion by a channel that opens in response to a change in pH.","definition_xrefs":["GOC:dph","PMID:27358471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"pH-gated monoatomic ion channel activity","termid":"GO:0160128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pH-gated chloride channel activity","termid":"GO:0061797"}


id: MOD:00104
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to L-proline amide.","definition_xrefs":["RESID:AA0095","PubMed:5760861","PubMed:4982117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline amide","synonyms":[{"name":"(2S)-pyrrolidine-2-carboxamide","type":"exact"},{"name":"L-proline amide","type":"exact"},{"name":"MOD_RES Proline amide","type":"exact"},{"name":"ProN","type":"exact"},{"name":"amidated L-proline","type":"exact"},{"name":"prolinamide","type":"exact"}],"termid":"MOD:00104"}


id: GO:0071278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cesium stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cesium ion","termid":"GO:0010164"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cesium ion","synonyms":[{"name":"cellular response to cesium","type":"exact"}],"termid":"GO:0071278"}


id: PBO:0052269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4C","termid":"PBO:0052269"}


id: PBO:0065858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB15, member RAS oncogene family","termid":"PBO:0065858"}


id: GO:0071235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a proline stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to proline","termid":"GO:0010238"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to proline","termid":"GO:0071235"}


id: FYPO:0003735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product that normally binds to a specific DNA sequence instead binds to a different sequence when a gene is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:7651412","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000653"],"is_obsolete":false,"name":"altered DNA binding specificity","synonyms":[{"name":"abnormal DNA binding specificity","type":"exact"}],"termid":"FYPO:0003735"}


id: PBO:0080568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and FYVE domain containing 3","termid":"PBO:0080568"}


id: GO:0019499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular nitrogen compound metabolic process","termid":"GO:0034641"},{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide metabolic process","synonyms":[{"name":"cyanide metabolism","type":"exact"}],"termid":"GO:0019499"}


id: PBO:0084380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity copper transporter of the vacuolar membrane; mutation confers resistance to toxic copper concentrations, while overexpression confers resistance to copper starvation; regulated by nonsense-mediated mRNA decay pathway","termid":"PBO:0084380"}


id: PBO:0053904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1194","termid":"PBO:0053904"}


id: PBO:0045458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DR1 associated protein 1","termid":"PBO:0045458"}


id: PR:O74736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein png2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.11c","synonyms":[{"name":"ING1 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-png2","type":"exact"}],"termid":"PR:O74736"}


id: GO:0030651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic biosynthetic process","synonyms":[{"name":"peptide antibiotic anabolism","type":"exact"},{"name":"peptide antibiotic biosynthesis","type":"exact"},{"name":"peptide antibiotic formation","type":"exact"},{"name":"peptide antibiotic synthesis","type":"exact"}],"termid":"GO:0030651"}


id: GO:0000151
data:
  {"annotated_genes":["SJAG_03454","SJAG_04574","SJAG_05012","SJAG_05236","SJAG_02837","SJAG_01051","SJAG_05297","SJAG_04619","SJAG_01801","SJAG_01956","SJAG_03130","SJAG_00439","SJAG_01472","SJAG_02299","SJAG_03350","SJAG_02044","SJAG_04661","SJAG_01637","SJAG_01533","SJAG_00656","SJAG_03417","SJAG_02685","SJAG_00435","SJAG_03680","SJAG_04180","SJAG_04540","SJAG_04087","SJAG_04612","SJAG_03037","SJAG_04309","SJAG_02162","SJAG_00681","SJAG_04573","SJAG_03809","SJAG_02591","SJAG_00756","SJAG_00819","SJAG_04384","SJAG_00262","SJAG_03858","SJAG_01617","SJAG_01573","SJAG_01134","SJAG_01657","SJAG_00146","SJAG_00341","SJAG_00615","SJAG_04520","SJAG_03218","SJAG_04853","SJAG_03302","SJAG_01886","SJAG_00552","SJAG_03841","SJAG_00071","SJAG_00320","SJAG_01678","SJAG_03385","SJAG_04142","SJAG_03575","SJAG_01022","SJAG_00293","SJAG_03351","SJAG_04971","SJAG_02703","SJAG_05329","SJAG_02197","SJAG_05274","SJAG_03728","SJAG_03612","SJAG_02186","SJAG_02753","SJAG_02169","SJAG_00666","SJAG_02319","SJAG_02041","SJAG_00192","SJAG_01068","SJAG_04035","SJAG_01585","SJAG_01709","SJAG_00651","SJAG_01253","SJAG_01572","SJAG_03006","SJAG_01392","SJAG_00033","SJAG_04151","SJAG_03561","SJAG_03345","SJAG_03219","SJAG_02822","SJAG_02651","SJAG_01540","SJAG_04335","SJAG_03651","SJAG_01480","SJAG_04611","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84067,84843,86248,88265,92205,97259,100431,100826,101767,103100,103119,106981,108302,111714,112850,112945],"is_not":false,"summary":null,"term":"GO:0000151"},{"annotations":[92295,90830,95874,87280,102054,84434,95344,103501,97621,111005,84176,89383,85861,95339,98080,109145,96565,63469,108196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005680"},{"annotations":[109003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031436"},{"annotations":[89981,113778,92421,106425,110042,114894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[90167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031463"},{"annotations":[101188,92377,92422,107223,86393,86444,83838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080008"},{"annotations":[107102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"},{"annotations":[95119,77669,93202,107167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035361"},{"annotations":[84748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031461"},{"annotations":[88200,93543,108813,112479,84480,103914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044695"},{"annotations":[83770,93106,103777,97659,92301,110302,90740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034657"},{"annotations":[84757,103578,101144,108996,113242,99805,100665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"},{"annotations":[85168,105503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000839"},{"annotations":[86763,89008,112298,114926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033503"},{"annotations":[100711,105003,106259,89984,93487,97902,86125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"},{"annotations":[100797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097505"},{"annotations":[93488,91219,94188,86126,95373,84047,100851,111873,98676,112804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019005"},{"annotations":[87064,92383,105903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033768"}]},"cv_name":"cellular_component","definition":"A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.","definition_xrefs":["PMID:9529603","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":99,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00071":null,"SJAG_00146":null,"SJAG_00192":null,"SJAG_00262":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00341":null,"SJAG_00435":null,"SJAG_00439":null,"SJAG_00552":null,"SJAG_00615":null,"SJAG_00651":null,"SJAG_00656":null,"SJAG_00666":null,"SJAG_00681":null,"SJAG_00756":null,"SJAG_00819":null,"SJAG_01022":null,"SJAG_01051":null,"SJAG_01068":null,"SJAG_01134":null,"SJAG_01253":null,"SJAG_01392":null,"SJAG_01472":null,"SJAG_01480":null,"SJAG_01533":null,"SJAG_01540":null,"SJAG_01572":null,"SJAG_01573":null,"SJAG_01585":null,"SJAG_01617":null,"SJAG_01637":null,"SJAG_01657":null,"SJAG_01678":null,"SJAG_01709":null,"SJAG_01801":null,"SJAG_01886":null,"SJAG_01956":null,"SJAG_02041":null,"SJAG_02044":null,"SJAG_02119":null,"SJAG_02162":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02197":null,"SJAG_02299":null,"SJAG_02319":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02685":null,"SJAG_02703":null,"SJAG_02753":null,"SJAG_02822":null,"SJAG_02837":null,"SJAG_03006":null,"SJAG_03037":null,"SJAG_03130":null,"SJAG_03218":null,"SJAG_03219":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03385":null,"SJAG_03417":null,"SJAG_03454":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03612":null,"SJAG_03651":null,"SJAG_03680":null,"SJAG_03728":null,"SJAG_03809":null,"SJAG_03841":null,"SJAG_03858":null,"SJAG_04035":null,"SJAG_04087":null,"SJAG_04142":null,"SJAG_04151":null,"SJAG_04180":null,"SJAG_04309":null,"SJAG_04335":null,"SJAG_04384":null,"SJAG_04520":null,"SJAG_04540":null,"SJAG_04573":null,"SJAG_04574":null,"SJAG_04611":null,"SJAG_04612":null,"SJAG_04619":null,"SJAG_04661":null,"SJAG_04853":null,"SJAG_04971":null,"SJAG_05012":null,"SJAG_05236":null,"SJAG_05274":null,"SJAG_05297":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000151","terms_by_termid":{"GO:0000151":null,"GO:0000836":null,"GO:0000839":null,"GO:0005680":null,"GO:0019005":null,"GO:0031436":null,"GO:0031461":null,"GO:0031463":null,"GO:0031464":null,"GO:0033503":null,"GO:0033768":null,"GO:0034657":null,"GO:0035361":null,"GO:0043224":null,"GO:0043494":null,"GO:0044695":null,"GO:0080008":null,"GO:0097505":null}}


id: PR:Q9UT17
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.11","synonyms":[{"name":"Spom972h-SPAC9.11","type":"exact"}],"termid":"PR:Q9UT17"}


id: GO:0140569
data:
  {"annotated_genes":["SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96796],"is_not":false,"summary":null,"term":"GO:0140569"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from the endoplasmic reticulum (ER) membrane.","definition_xrefs":["PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraction of mislocalized protein from membrane","termid":"GO:0140568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"extraction of mislocalized protein from ER membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140569","terms_by_termid":{"GO:0140569":null}}


id: PBO:0049551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 13","termid":"PBO:0049551"}


id: PATO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001173 urine glucose composition value (obsolete PATO:0001173)","termid":"PATO:0001173"}


id: PBO:0028924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription","termid":"PBO:0028924"}


id: PBO:0044665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicarbonyl and L-xylulose reductase","termid":"PBO:0044665"}


id: PBO:0090258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic ubiquitin ligase substrate adaptor Aly2","termid":"PBO:0090258"}


id: FYPO:0000654
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[115218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a catalytic activity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01458":null,"SJAG_02796":null},"genotype_count":2,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"catalytic activity phenotype","references_by_uniquename":{"PMID:31956022":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796","SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"enzymatic activity phenotype","type":"exact"},{"name":"fission yeast catalytic activity phenotype","type":"exact"}],"termid":"FYPO:0000654","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0000719":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: PBO:0066853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 153","termid":"PBO:0066853"}


id: PR:Q9Y884
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pek1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase skh1/pek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.07","synonyms":[{"name":"Spom972h-pek1","type":"exact"}],"termid":"PR:Q9Y884"}


id: MOD:02003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-serine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O3-acylated L-serine","termid":"MOD:02003"}


id: GO:0038096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An Fc-gamma receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.","definition_xrefs":["PMID:12488490","PMID:15466916","GOC:phg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","termid":"GO:0002433"},{"relation_name":"is_a","term_name":"Fc-gamma receptor signaling pathway","termid":"GO:0038094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:0038096"}


id: GO:0055041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclopentanol + NAD+ = cyclopentanone + H+ + NADH.","definition_xrefs":["EC:1.1.1.163","RHEA:11728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclopentanol dehydrogenase activity","secondary_identifiers":["MetaCyc:CYCLOPENTANOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02553"],"synonyms":[{"name":"cyclopentanol:NAD+ oxidoreductase activity","type":"related"},{"name":"cyclopentanol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0055041"}


id: PBO:0051905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha D","termid":"PBO:0051905"}


id: PBO:0003341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp1 (predicted)","termid":"PBO:0003341"}


id: PBO:0030667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_27S_rRNA_precursor_level","termid":"PBO:0030667"}


id: PBO:0047322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAU ubiquitin like and ribosomal protein S30 fusion","termid":"PBO:0047322"}


id: GO:1904589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein import.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11406629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"protein import","termid":"GO:0017038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of protein import","synonyms":[{"name":"regulation of protein uptake","type":"exact"}],"termid":"GO:1904589"}


id: GO:1902136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-secoisolariciresinol.","definition_xrefs":["PMID:8910615","PMID:9872995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(-)-secoisolariciresinol metabolic process","synonyms":[{"name":"(-)-secoisolariciresinol metabolism","type":"exact"}],"termid":"GO:1902136"}


id: GO:0017021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete myosin phosphatase myosin binding (obsolete GO:0017021)","synonyms":[{"name":"myosin phosphatase myosin binding","type":"exact"}],"termid":"GO:0017021"}


id: GO:0060315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051280"},{"relation_name":"is_a","term_name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060315"}


id: PBO:0069873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1160, pseudogene","termid":"PBO:0069873"}


id: FYPO:0004767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-alanine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar alanine level","synonyms":[{"name":"increased level of alanine in vacuole","type":"exact"},{"name":"increased vacuolar L-alanine level","type":"exact"},{"name":"increased vacuolar alanine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar alanine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004767"}


id: PBO:0040146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asialoglycoprotein receptor 1","termid":"PBO:0040146"}


id: POMBASE_GENE_EX_REL:not_happens_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not_happens_during","termid":"POMBASE_GENE_EX_REL:not_happens_during"}


id: GO:0034236
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70668],"is_not":false,"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to one or both of the catalytic subunits of protein kinase A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"},{"relation_name":"is_a","term_name":"protein kinase A binding","termid":"GO:0051018"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein kinase A catalytic subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PKA catalytic subunit binding","type":"exact"}],"termid":"GO:0034236","terms_by_termid":{"GO:0034236":null}}


id: PBO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing","termid":"PBO:0030536"}


id: PBO:0045501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 4","termid":"PBO:0045501"}


id: GO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + L-aspartate(in) + L-glutamate(out) = H+(in) + L-aspartate(out) + L-glutamate(in).","definition_xrefs":["PMID:11566871","RHEA:70783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"aspartate:glutamate, proton antiporter activity","termid":"GO:0000515"}


id: PBO:0062536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 1","termid":"PBO:0062536"}


id: FYECO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing maltose as the carbon source, yeast extract and other components.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose YE","synonyms":[{"name":"maltose rich medium","type":"broad"}],"termid":"FYECO:0000236"}


id: GO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + 2-oxoglutarate + O2 = a flavone + succinate + CO2 + H2O.","definition_xrefs":["EC:1.14.20.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"flavone synthase activity","secondary_identifiers":["RHEA:10448","MetaCyc:RXN-8000"],"synonyms":[{"name":"FNS I","type":"related"},{"name":"flavanone,2-oxoglutarate:oxygen oxidoreductase (dehydrating) activity","type":"related"},{"name":"flavone synthase I activity","type":"related"}],"termid":"GO:0033759"}


id: PBO:0066412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT TNF receptor","termid":"PBO:0066412"}


id: PBO:0004216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase Tdh1","termid":"PBO:0004216"}


id: PBO:0045014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog C","termid":"PBO:0045014"}


id: PBO:0040210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 3","termid":"PBO:0040210"}


id: GO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"lateral mesoderm morphogenesis","termid":"GO:0048369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm formation","synonyms":[{"name":"lateral plate mesoderm biosynthesis","type":"exact"},{"name":"lateral plate mesoderm formation","type":"exact"}],"termid":"GO:0048370"}


id: PBO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine","termid":"PBO:0000374"}


id: PBO:0031594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_during_vegetative_growth","termid":"PBO:0031594"}


id: PR:Q9P7T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX60 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01742","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized helicase C694.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.02","secondary_identifiers":["UniProtKB:Q9P7T8"],"synonyms":[{"name":"Spom972h-DDX60","type":"exact"}],"termid":"PR:Q9P7T8"}


id: GO:0032577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a linoleoyl ((9Z,12Z)-octadeca-9,12-dienoyl) group from phosphatidylcholine to an oxygen atom on a cardiolipin molecule.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-linoleoyltransferase activity","termid":"GO:0032576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine:cardiolipin O-linoleoyltransferase activity","synonyms":[{"name":"phosphatidylcholine:cardiolipin linoleoyltransferase","type":"exact"}],"termid":"GO:0032577"}


id: GO:1901722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["PMID:18182616","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"}


id: GO:0034441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipid or protein within a plasma lipoprotein particle by oxidation of the lipid or one or more amino acids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle oxidation","synonyms":[{"name":"plasma lipoprotein oxidation","type":"related"}],"termid":"GO:0034441"}


id: FYPO:0000002
data:
  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id: PBO:0074981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-23","termid":"PBO:0074981"}


id: PBO:0081015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 47","termid":"PBO:0081015"}


id: GO:1902032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in response to osmotic stress.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:18636113"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in response to osmotic stress (obsolete GO:1902032)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in osmotic response","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in osmotic stress response","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in osmotic response","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in osmotic stress response","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in osmotic response","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in osmotic stress response","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in osmotic response","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in osmotic stress response","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in response to osmotic stress","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in osmotic response","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in osmotic stress response","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in response to osmotic stress","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in osmotic response","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in osmotic stress response","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in response to osmotic stress","type":"related"}],"termid":"GO:1902032"}


id: GO:0048327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an axial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"axial mesodermal cell fate commitment","termid":"GO:0048322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate specification","synonyms":[{"name":"axial mesoderm cell fate specification","type":"exact"}],"termid":"GO:0048327"}


id: PBO:0027313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_template_switch-mediated_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0027313"}


id: PBO:0005115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn8 (predicted)","termid":"PBO:0005115"}


id: PBO:0073454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 3","termid":"PBO:0073454"}


id: GO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal part (obsolete GO:0044439)","synonyms":[{"name":"peroxisome component","type":"exact"}],"termid":"GO:0044439"}


id: PBO:0040808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 1","termid":"PBO:0040808"}


id: PBO:0080970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8B","termid":"PBO:0080970"}


id: GO:1903009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a proteasome complex into its constituent components.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proteasome complex disassembly","synonyms":[{"name":"26S proteasome disassembly","type":"narrow"},{"name":"proteasome degradation","type":"exact"},{"name":"proteasome disassembly","type":"exact"}],"termid":"GO:1903009"}


id: GO:0032145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to succinate-semialdehyde dehydrogenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase binding","synonyms":[{"name":"succinic semialdehyde dehydrogenase binding","type":"exact"}],"termid":"GO:0032145"}


id: PBO:0088664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stm1/Oga1 family protein Smp4","termid":"PBO:0088664"}


id: FYPO:0000552
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