# terms

id: PBO:0066988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 291","termid":"PBO:0066988"}


id: PBO:0089056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim21","termid":"PBO:0089056"}


id: PBO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11","termid":"PBO:0090063"}


id: PBO:0067844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 146","termid":"PBO:0067844"}


id: PR:O94477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo52 gene.","definition_xrefs":["UniProtKB:O94477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-52 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.10c","synonyms":[{"name":"Spom972h-myo52","type":"exact"},{"name":"myosin type V-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94477"}


id: GO:1905336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aggrephagy.","definition_xrefs":["PMID:25686248","GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"regulation of aggrephagy","termid":"GO:1905335"},{"relation_name":"negatively_regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"negative regulation of aggrephagy","synonyms":[{"name":"down regulation of aggrephagy","type":"exact"},{"name":"down-regulation of aggrephagy","type":"exact"},{"name":"downregulation of aggrephagy","type":"exact"},{"name":"inhibition of aggrephagy","type":"narrow"}],"termid":"GO:1905336"}


id: PBO:0039663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit beta 1","termid":"PBO:0039663"}


id: PBO:0059126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage expressed 1","termid":"PBO:0059126"}


id: PBO:0036490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get1 (predicted)","termid":"PBO:0036490"}


id: PBO:0027704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_HMW_ubiquitin_conjugate_level","termid":"PBO:0027704"}


id: GO:0099541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from post to pre-synapse, across the synaptic cleft, mediated by a lipid.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by lipid","termid":"GO:0099541"}


id: PBO:0029317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_subtelomere","termid":"PBO:0029317"}


id: PBO:0070403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP9 pre-mRNA splicing factor","termid":"PBO:0070403"}


id: PBO:0027462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_error-prone_translesion_synthesis","termid":"PBO:0027462"}


id: GO:0045128
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103885],"is_not":false,"summary":null,"term":"GO:0045128"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"negative regulation of meiotic nuclear division","termid":"GO:0045835"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"negatively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0140013","GO:0006310"],"is_obsolete":false,"name":"negative regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiotic recombination","type":"exact"},{"name":"down-regulation of meiotic recombination","type":"exact"},{"name":"downregulation of meiotic recombination","type":"exact"},{"name":"inhibition of meiotic recombination","type":"narrow"},{"name":"suppression of meiotic recombination","type":"exact"}],"termid":"GO:0045128","terms_by_termid":{"GO:0045128":null}}


id: PBO:0048436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)","termid":"PBO:0048436"}


id: PBO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin exportin T Los1 (predicted)","termid":"PBO:0004600"}


id: GO:1904193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["PMID:24498161","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte apoptotic process","synonyms":[{"name":"down regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"down-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"downregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"downregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"downregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"downregulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"inhibition of cholangiocyte apoptosis","type":"narrow"},{"name":"inhibition of cholangiocyte apoptotic process","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"negative regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904193"}


id: GO:0160076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical inflammasome complex assembly.","definition_xrefs":["PMID:22002608","PMID:26375259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"negatively_regulates","term_name":"non-canonical inflammasome complex assembly","termid":"GO:0160075"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of non-canonical inflammasome complex assembly","termid":"GO:0160076"}


id: GO:1904191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of cyclin-dependent protein serine/threonine kinase activity that is involved in meiotic nuclear division.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:15791259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"is_a","term_name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0045737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in meiotic nuclear division","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"positive regulation of CDK activity involved in meiotic nuclear division","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in meiosis","type":"broad"},{"name":"stimulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"up regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"up-regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"upregulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"}],"termid":"GO:1904191"}


id: PBO:0046035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 3","termid":"PBO:0046035"}


id: PATO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immature","synonyms":[{"name":"underdeveloped","type":"related"}],"termid":"PATO:0001501"}


id: MOD:00086
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoyl-L-lysine.","definition_xrefs":["PubMed:7801126","PubMed:7939682","PubMed:2498336","RESID:AA0077","OMSSA:93","Unimod:47#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-palmitoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(hexadecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(hexadecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-palmitoyl lysine","type":"exact"},{"name":"N(zeta)-palmitoyllysine","type":"exact"},{"name":"N6-(1-oxohexadecyl)-L-lysine","type":"exact"},{"name":"N6-hexadecanoylated L-lysine","type":"exact"},{"name":"N6-palmitoyl-L-lysine","type":"exact"},{"name":"N6-palmitoylated L-lysine","type":"exact"},{"name":"N6PamLys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"epsilon-palmitoyllysine","type":"exact"},{"name":"palmitoylationk","type":"exact"}],"termid":"MOD:00086"}


id: PBO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis_II","termid":"PBO:0034590"}


id: PR:Q9P6N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC823.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6N3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive to high expression protein 9 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.13c","synonyms":[{"name":"Spom972h-SPAC823.13c","type":"exact"}],"termid":"PR:Q9P6N3"}


id: PBO:0074054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 34","termid":"PBO:0074054"}


id: PBO:0063366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 6","termid":"PBO:0063366"}


id: PBO:0027478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytokinesis_checkpoint","termid":"PBO:0027478"}


id: PR:O94374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.08c","synonyms":[{"name":"Spom972h-imp1","type":"exact"},{"name":"importin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94374"}


id: PBO:0049667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan binding protein 2","termid":"PBO:0049667"}


id: GO:0034915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methyl-3-oxooctanoyl-CoA + CoA = acetyl-CoA + 2-methylhexanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-methylhexanoyl-CoA C-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.-"],"termid":"GO:0034915"}


id: PBO:0031889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase Dal2 (predicted)","termid":"PBO:0031889"}


id: GO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains ribosomal RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete rRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071428)","synonyms":[{"name":"rRNA-containing RNP export from nucleus","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071428"}


id: GO:0015583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein N-phosphohistidine + beta-glucoside(out) = protein histidine + beta-glucoside phosphate(in). The beta-glucoside may be arbutin, salicin or cellobiose.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-glucoside [arbutin-salicin-cellobiose] permease activity (obsolete GO:0015583)","synonyms":[{"name":"beta-glucoside [arbutin-salicin-cellobiose] permease activity","type":"exact"}],"termid":"GO:0015583"}


id: PBO:0040863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 2, pseudogene","termid":"PBO:0040863"}


id: GO:0005990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose metabolic process","termid":"GO:0005988"},{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lactose catabolic process","synonyms":[{"name":"lactose breakdown","type":"exact"},{"name":"lactose catabolism","type":"exact"},{"name":"lactose degradation","type":"exact"}],"termid":"GO:0005990"}


id: PBO:0027402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_cellular_response_to_oxidative_stress","termid":"PBO:0027402"}


id: GO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism stops, prevents, or reduces the frequency, rate or extent of translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host translation (obsolete GO:0044074)","synonyms":[{"name":"negative regulation of host translation by symbiont","type":"exact"}],"termid":"GO:0044074"}


id: FYPO:0006818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere outer repeat","termid":"FYPO:0002842"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at centromere outer repeat","synonyms":[{"name":"decreased protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"decreased protein localization to chromatin at centromere otr","type":"exact"},{"name":"decreased protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at pericentric region during vegetative growth","type":"related"},{"name":"decreased protein localization to chromatin at pericentromeric region during vegetative growth","type":"related"},{"name":"reduced protein localization to chromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0006818"}


id: GO:1900334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:1900333"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0006790","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from 3-(methylthio)propionic acid","synonyms":[{"name":"down regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"down-regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"downregulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"inhibition of methane biosynthetic process from 3-(methylthio)propionic acid","type":"narrow"}],"termid":"GO:1900334"}


id: PBO:0029973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_gamma_radiation","termid":"PBO:0029973"}


id: PBO:0059549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Gln (CAA/G)","termid":"PBO:0059549"}


id: GO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-5 production","secondary_identifiers":["GO:0042225","GO:0072603"],"synonyms":[{"name":"IL-5 production","type":"exact"},{"name":"interleukin-5 biosynthetic process","type":"narrow"},{"name":"interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032634"}


id: PBO:0038715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 10","termid":"PBO:0038715"}


id: PBO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin C","termid":"PBO:0047680"}


id: FYECO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which SDS (sodium dodecyl sulfate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ SDS","synonyms":[{"name":"sodium dodecyl sulfate added","type":"exact"}],"termid":"FYECO:0000167"}


id: PBO:0091781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious protein, reverse strand of sno20","termid":"PBO:0091781"}


id: FYPO:0009099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing mannitol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on mannitol carbon source","synonyms":[{"name":"decreased growth on mannitol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on mannitol carbon source","type":"exact"},{"name":"reduced cell growth on mannitol carbon source","type":"related"},{"name":"slow cell growth on mannitol carbon source","type":"narrow"}],"termid":"FYPO:0009099"}


id: PBO:0036517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex variant subunit Cbc3","termid":"PBO:0036517"}


id: PATO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000517 abiotic stress sensitivity value (obsolete PATO:0000517)","termid":"PATO:0000517"}


id: PBO:0087204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase; required for the biosynthesis of spermidine and spermine; cells lacking Spe2p require spermine or spermidine for growth in the presence of oxygen but not when grown anaerobically","termid":"PBO:0087204"}


id: PBO:0040068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP21 antisense RNA 1","termid":"PBO:0040068"}


id: PBO:0091549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1-50 Overexpression Suppressor","termid":"PBO:0091549"}


id: GO:0035171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemocyte precursor cell acquires the specialized features of a lamellocyte. Lamellocytes are a hemocyte lineage that exists only in larvae, but are seldom observed in healthy animals. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellocyte differentiation","synonyms":[{"name":"lamellocyte cell differentiation","type":"exact"}],"termid":"GO:0035171"}


id: PBO:0003250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga6 (predicted)","termid":"PBO:0003250"}


id: PBO:0065206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 38B","termid":"PBO:0065206"}


id: PR:Q09907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease III-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00443","PANTHER:PTHR10359:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease III homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.07","secondary_identifiers":["UniProtKB:Q09907"],"synonyms":[{"name":"DNA glycoslyase/AP lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NTHL1","type":"exact"},{"name":"bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09907"}


id: GO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thrombospondin and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:BHF","GOC:signaling","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thrombospondin receptor activity","termid":"GO:0070053"}


id: GO:1904378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining an endoplasmic reticulum (ER) protein in an unfolded, soluble state that contributes to its degradation by the cytoplasmic proteasome. Maintaining ER-resident proteins in an unfolded yet soluble state condition after their retro-translocation favors their turnover by the cytosolic proteasome.","definition_xrefs":["GOC:nc","GOC:bf","PMID:21636303","GOC:BHF","GOC:PARL","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of unfolded protein","termid":"GO:0036506"},{"relation_name":"part_of","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"maintenance of unfolded protein involved in ERAD pathway","synonyms":[{"name":"ERAD chaperone-like activity","type":"related"},{"name":"chaperone holdase activity","type":"related"},{"name":"holdase activity","type":"related"},{"name":"maintenance of unfolded protein during ERAD","type":"related"},{"name":"maintenance of unfolded protein involved in ER-associated degradation pathway","type":"related"},{"name":"maintenance of unfolded protein involved in endoplasmic reticulum-associated degradation","type":"exact"},{"name":"maintenance of unfolded protein involved in endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904378"}


id: FYPO:0000340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a single functional copy of a gene does not provide sufficient normal function in a diploid cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"haploinsufficient","synonyms":[{"name":"haploinsufficient during mitotic cell cycle","type":"related"},{"name":"haploinsufficient during vegetative growth","type":"exact"}],"termid":"FYPO:0000340"}


id: GO:0140672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and possibly H4. Shares the histone acetylation (HAT) module of GCN5/PCAF-ADA2-ADA3-SGF29 (or orthologs) with the related SAGA complex (GO:0000124). Contains HAT subunits GCN5 or PCAF in a mutually exclusive manner. In addition to the HAT module contains DR1/NC2B, KAT14, MBIP, WDR5, YEATS2 and ZZZ3 or orthologs. Also regulates the activity of non-histone targets and orchestrates mitotic progression by regulating Cyclin A degradation through acetylation.","definition_xrefs":["PMID:19936620","PMID:20562830","PMID:28966424","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"ATAC complex","synonyms":[{"name":"ADA2A-containing complex","type":"exact"},{"name":"Ada Two-A containing complex","type":"exact"},{"name":"Ada two A containing complex","type":"exact"},{"name":"Ada-Two-A-containing complex","type":"exact"},{"name":"G-ATAC complex","type":"exact"},{"name":"KAT2A-containing ATAC complex","type":"exact"},{"name":"KAT2B-containing ATAC complex","type":"exact"}],"termid":"GO:0140672"}


id: MOD:01421
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a serine hydroxyl with the carbonyl of the preceding residue to form an oxazole or oxazoline ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"}


id: PBO:0049722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6","termid":"PBO:0049722"}


id: PATO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000486 moderate response (obsolete PATO:0000486)","termid":"PATO:0000486"}


id: PBO:0059466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 5","termid":"PBO:0059466"}


id: PBO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidotransferase (predicted)","termid":"PBO:0000355"}


id: PBO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan","termid":"PBO:0002116"}


id: PBO:0059810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 36","termid":"PBO:0059810"}


id: MOD:01214
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - OBSOLETE because redundant, the difference component of MOD:01060. Remap to MOD:01060.","definition_xrefs":["PubMed:11510821","Unimod:4#C","PubMed:12422359","PubMed:10504701"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01214 iodoacetamide - site C (obsolete MOD:01214)","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"}],"termid":"MOD:01214"}


id: GO:0051973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomerase activity, the catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of telomerase activity","termid":"GO:0051972"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomerase activity","synonyms":[{"name":"activation of telomerase activity","type":"narrow"},{"name":"stimulation of telomerase activity","type":"narrow"},{"name":"telomerase activator","type":"related"},{"name":"up regulation of telomerase activity","type":"exact"},{"name":"up-regulation of telomerase activity","type":"exact"},{"name":"upregulation of telomerase activity","type":"exact"}],"termid":"GO:0051973"}


id: FYPO:0005127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from late meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of late meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of late meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of late meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005127"}


id: GO:0030286
data:
  {"annotated_genes":["SJAG_01662","SJAG_00113","SJAG_02286","SJAG_02561","SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86518,83216,93285,96490,107363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005868"}]},"cv_name":"cellular_component","definition":"Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_01370":null,"SJAG_01662":null,"SJAG_02286":null,"SJAG_02561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"dynein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030286","terms_by_termid":{"GO:0005868":null}}


id: GO:0014059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of dopamine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"dopamine secretion","termid":"GO:0014046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine secretion","termid":"GO:0014059"}


id: PBO:0026981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_prospore_membrane_closure","termid":"PBO:0026981"}


id: PBO:0040973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNIP3 pseudogene 44","termid":"PBO:0040973"}


id: GO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + aspartyl-tRNA(Asn) + ATP = L-glutamate + asparaginyl-tRNA(Asn) + phosphate + ADP.","definition_xrefs":["MetaCyc:6.3.5.6-RXN","EC:6.3.5.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["Wikipedia:Asparaginyl-tRNA_synthase_(glutamine-hydrolysing)","RHEA:14513"],"synonyms":[{"name":"Asp-AdT activity","type":"related"},{"name":"Asp-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"asparaginyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"aspartyl-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050566"}


id: GO:0044245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested polysaccharides into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polysaccharide digestion","termid":"GO:0044245"}


id: GO:0006112
data:
  {"annotated_genes":["SJAG_01089","SJAG_03964","SJAG_00963","SJAG_02178","SJAG_01209","SJAG_04469","SJAG_02076","SJAG_01376","SJAG_04067","SJAG_01319","SJAG_01970","SJAG_00570","SJAG_00132","SJAG_03442","SJAG_01080"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84601,91470,102559,102794,102795,107758,110573,111931],"is_not":false,"summary":null,"term":"GO:0006112"},{"annotations":[104825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[99123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[110497,114579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005977"},{"annotations":[77264,86467,102272],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which a cell derives energy from stored compounds such as fats or glycogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy derivation by oxidation of organic compounds","termid":"GO:0015980"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00132":null,"SJAG_00570":null,"SJAG_00963":null,"SJAG_01080":null,"SJAG_01089":null,"SJAG_01209":null,"SJAG_01319":null,"SJAG_01376":null,"SJAG_01970":null,"SJAG_02076":null,"SJAG_02178":null,"SJAG_03442":null,"SJAG_03964":null,"SJAG_04067":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"energy reserve metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"energy reserve metabolism","type":"exact"}],"termid":"GO:0006112","terms_by_termid":{"GO:0005977":null,"GO:0005978":null,"GO:0005980":null,"GO:0006112":null,"GO:0045719":null}}


id: MOD:00610
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:291","PubMed:10695144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"mercury containing modified residue","termid":"MOD:01075"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl mercury","synonyms":[{"name":"Delta:Hg(1)","type":"related"},{"name":"Mercury Mercaptan","type":"related"}],"termid":"MOD:00610"}


id: FYPO:0001156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells cause the pH of their growth medium to decrease by a greater amount than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered effect on growth medium","termid":"FYPO:0001155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"decreased pH of growth medium","synonyms":[{"name":"decreased pH level of growth medium","type":"exact"},{"name":"increased growth medium acidification","type":"exact"},{"name":"reduced pH of growth medium","type":"exact"}],"termid":"FYPO:0001156"}


id: GO:0019843
data:
  {"annotated_genes":["SJAG_01478","SJAG_01087","SJAG_02477","SJAG_00523","SJAG_04342","SJAG_01468","SJAG_01201","SJAG_04847","SJAG_04492","SJAG_03952","SJAG_04304","SJAG_03297","SJAG_02723","SJAG_02280","SJAG_00315","SJAG_02535","SJAG_04689","SJAG_02508","SJAG_00945","SJAG_03043","SJAG_00566","SJAG_01194","SJAG_00629","SJAG_00748","SJAG_04754","SJAG_02427","SJAG_00067","SJAG_00889","SJAG_04066","SJAG_01568","SJAG_00323","SJAG_02372","SJAG_02312","SJAG_00253","SJAG_02840","SJAG_04281","SJAG_03053","SJAG_05248","SJAG_00503","SJAG_00034","SJAG_00465","SJAG_03197","SJAG_04188","SJAG_00166","SJAG_03252","SJAG_01132","SJAG_00083","SJAG_04414","SJAG_05190","SJAG_04900","SJAG_03326","SJAG_04108","SJAG_02530","SJAG_00782","SJAG_02359","SJAG_02861","SJAG_01387","SJAG_02024","SJAG_00069","SJAG_02510","SJAG_00544","SJAG_04767","SJAG_04663","SJAG_00513","SJAG_04324"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83833,84426,84427,85349,85390,85533,86855,87223,87647,88045,88046,90209,90210,90570,90571,91029,91076,92035,92036,92264,92554,93937,93938,96233,96505,96551,96552,96951,97106,97107,97698,97699,97728,98109,98891,100089,100090,101283,101284,101597,101598,101936,101937,102599,102600,103829,103830,104135,104136,105481,106325,106688,106689,108124,108312,108313,110080,110081,110256,110257,111659,111823,113750,113751],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[98283,88988,93194,93193,98282,84411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008097"},{"annotations":[108182,111421,110542,110541,108102,92881,108101,112668,111790,84520,108183,112667,111420,108457,92882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070180"},{"annotations":[102548,93699,87047,109964,92191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042134"},{"annotations":[95398,92329,111780,95399,112097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070181"}]},"cv_name":"molecular_function","definition":"Binding to a ribosomal RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00067":null,"SJAG_00069":null,"SJAG_00083":null,"SJAG_00166":null,"SJAG_00253":null,"SJAG_00315":null,"SJAG_00323":null,"SJAG_00465":null,"SJAG_00503":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00566":null,"SJAG_00629":null,"SJAG_00748":null,"SJAG_00782":null,"SJAG_00889":null,"SJAG_00945":null,"SJAG_01087":null,"SJAG_01132":null,"SJAG_01194":null,"SJAG_01201":null,"SJAG_01387":null,"SJAG_01468":null,"SJAG_01478":null,"SJAG_01568":null,"SJAG_02024":null,"SJAG_02280":null,"SJAG_02312":null,"SJAG_02359":null,"SJAG_02372":null,"SJAG_02427":null,"SJAG_02477":null,"SJAG_02508":null,"SJAG_02510":null,"SJAG_02530":null,"SJAG_02535":null,"SJAG_02723":null,"SJAG_02840":null,"SJAG_02861":null,"SJAG_03043":null,"SJAG_03053":null,"SJAG_03197":null,"SJAG_03252":null,"SJAG_03297":null,"SJAG_03326":null,"SJAG_03952":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04188":null,"SJAG_04281":null,"SJAG_04304":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04663":null,"SJAG_04689":null,"SJAG_04754":null,"SJAG_04767":null,"SJAG_04847":null,"SJAG_04900":null,"SJAG_05190":null,"SJAG_05248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"rRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000944"],"synonyms":[{"name":"base pairing with rRNA","type":"narrow"}],"termid":"GO:0019843","terms_by_termid":{"GO:0008097":null,"GO:0019843":null,"GO:0042134":null,"GO:0070180":null,"GO:0070181":null}}


id: PBO:0066361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoverin","termid":"PBO:0066361"}


id: PBO:0028304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitosis","termid":"PBO:0028304"}


id: GO:0019571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-arabinose, the D-enantiomer of arabino-pentose.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose catabolic process","termid":"GO:0019568"},{"relation_name":"is_a","term_name":"D-arabinose metabolic process","termid":"GO:0046372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-arabinose catabolic process","synonyms":[{"name":"D-arabinose breakdown","type":"exact"},{"name":"D-arabinose catabolism","type":"exact"},{"name":"D-arabinose degradation","type":"exact"}],"termid":"GO:0019571"}


id: PBO:0089364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1","termid":"PBO:0089364"}


id: PR:P04688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nda2 gene.","definition_xrefs":["UniProtKB:P04688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha-1 chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.15c","synonyms":[{"name":"Spom972h-nda2","type":"exact"}],"termid":"PR:P04688"}


id: PBO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-Associated Factor","termid":"PBO:0005167"}


id: MOD:01081
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-glycosyloxy- (of lysine) or beta-glycosyloxy- (of phenylalanine or tyrosine)","termid":"MOD:01081"}


id: PBO:0073321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 4","termid":"PBO:0073321"}


id: PBO:0039493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A16, pseudogene","termid":"PBO:0039493"}


id: GO:0032257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a dense core granule is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of secretory granule location","termid":"GO:0032255"},{"relation_name":"part_of","term_name":"dense core granule localization","termid":"GO:0032253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of dense core granule location","synonyms":[{"name":"maintenance of dense core granule localization","type":"related"},{"name":"maintenance of dense core vesicle location","type":"exact"}],"termid":"GO:0032257"}


id: PBO:0088886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase","termid":"PBO:0088886"}


id: PBO:0085280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane E3 ubiquitin ligase; required for for Ubc4p-dependent Pex5p ubiquitination and peroxisomal matrix protein import; contains zinc-binding RING domain; mutations in human homolog cause various peroxisomal disorders","termid":"PBO:0085280"}


id: PBO:0056695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific with OB-fold","termid":"PBO:0056695"}


id: FYPO:0001395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal activation of monopolar cell growth","synonyms":[{"name":"normal activation of monopolar vegetative cell growth","type":"exact"},{"name":"normal initiation of growth from old end following cell division","type":"exact"}],"termid":"FYPO:0001395"}


id: GO:0005712
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"chiasma","secondary_identifiers":["Wikipedia:Chiasma_(genetics)"],"termid":"GO:0005712"}


id: PBO:0082152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adapter protein for pexophagy and the Cvt targeting pathway; directs receptor-bound cargo to the phagophore assembly site (PAS) for packaging into vesicles; required for recruiting other proteins to the PAS; recruits Dnm1p to facilitate fission of mitochondria that are destined for removal by mitophagy","termid":"PBO:0082152"}


id: GO:0010560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"positive regulation of glycoprotein metabolic process","termid":"GO:1903020"},{"relation_name":"positively_regulates","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"}


id: FYPO:0000336
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115541],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115407,115344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115404],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115372,115637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115542],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component assembly at the cellular level is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_04280","SJAG_04522","SJAG_02392"],"name":"abnormal cellular component assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143","SJAG_02592","SJAG_04522"],"single_locus_genotype_uniquenames":["sty1delta","mid1delta","rga4delta","pom1delta"],"synonyms":[{"name":"abnormal cellular component assembly at cellular level","type":"exact"}],"termid":"FYPO:0000336","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0021598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the abducens nerve is generated and organized. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve morphogenesis","synonyms":[{"name":"CN VI development","type":"related"}],"termid":"GO:0021598"}


id: PATO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000754 startle response (obsolete PATO:0000754)","termid":"PATO:0000754"}


id: PBO:0110988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF34 family, possible chaperone or insertase (PMID: 34572495)","termid":"PBO:0110988"}


id: PBO:0044076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 3","termid":"PBO:0044076"}


id: GO:0060293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole of an oocyte, egg or early embryo that will be inherited by the cells that will give rise to the germ line.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm","termid":"GO:0045495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"germ plasm","secondary_identifiers":["Wikipedia:Germ_plasm"],"termid":"GO:0060293"}


id: GO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-pimara-9(11),15-diene + diphosphate.","definition_xrefs":["RHEA:25544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ent-pimara-9(11),15-diene synthase activity","secondary_identifiers":["EC:4.2.3.31","MetaCyc:RXN-9299"],"synonyms":[{"name":"PMD synthase activity","type":"broad"},{"name":"ent-copalyl-diphosphate diphosphate-lyase [ent-pimara-9(11),15-diene-forming] activity","type":"exact"}],"termid":"GO:0052674"}


id: PBO:0061367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 27","termid":"PBO:0061367"}


id: PBO:0012858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp42","termid":"PBO:0012858"}


id: PR:O94700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endothelial differentiation-related factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10245:SF1","OMA:SCHPO02913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein-bridging factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.17","secondary_identifiers":["UniProtKB:O94700"],"synonyms":[{"name":"Spom972h-EDF1","type":"exact"}],"termid":"PR:O94700"}


id: SO:1000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)uTp","type":"related"},{"name":"unorientated intrachromosomal transposition","type":"exact"}],"termid":"SO:1000162"}


id: FYPO:0000618
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115191,115192,115193],"is_not":false,"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase of mitosis is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of mitotic anaphase","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000617"],"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"delayed mitotic anaphase progression","type":"related"},{"name":"increased duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased duration of mitotic anaphase progression","type":"exact"},{"name":"mitotic cell cycle progression in anaphase: delayed","type":"related"},{"name":"mitotic cell cycle progression in anaphase: increased duration","type":"related"},{"name":"prolonged mitotic anaphase","type":"exact"}],"termid":"FYPO:0000618","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0071925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 2","termid":"PBO:0071925"}


id: GO:1901761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxytetracycline.","definition_xrefs":["GOC:TermGenie","PMID:8163168","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"oxytetracycline metabolic process","synonyms":[{"name":"oxytetracycline metabolism","type":"exact"}],"termid":"GO:1901761"}


id: PBO:0083577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps YFR035C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083577"}


id: PBO:0073322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 5","termid":"PBO:0073322"}


id: FYPO:0007873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which exocytosis is abnormal. Exocytosis is the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. A phenotype may affect exocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0006887","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal exocytosis","synonyms":[{"name":"exocytosis defects","type":"exact"}],"termid":"FYPO:0007873"}


id: PBO:0062641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily K member 2 pseudogene","termid":"PBO:0062641"}


id: PR:P87110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- itr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.03","synonyms":[{"name":"Spom972h-itr2","type":"exact"}],"termid":"PR:P87110"}


id: PBO:0084847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L16 ribosomal protein; synthetic lethality with hac1 mutation suggests a possible role in synthesis of precursors for protein glycosylation","termid":"PBO:0084847"}


id: PBO:0061464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 0 group B member 2","termid":"PBO:0061464"}


id: GO:0031385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the end of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of termination of mating projection growth","termid":"GO:0031385"}


id: GO:0072685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an Mre11 complex, a trimeric protein complex that possesses endonuclease activity and is involved in meiotic recombination, DNA repair and checkpoint signaling.","definition_xrefs":["GOC:mah","PMID:19211838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Mre11 complex assembly","synonyms":[{"name":"MRN complex assembly","type":"exact"},{"name":"MRX complex assembly","type":"exact"},{"name":"RAD50-MRE11-NBN complex assembly","type":"exact"},{"name":"RMX complex assembly","type":"exact"},{"name":"Rad50 complex assembly","type":"exact"},{"name":"Rad50-Rad32-Nbs1 complex assembly","type":"exact"}],"termid":"GO:0072685"}


id: PBO:0071166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 5","termid":"PBO:0071166"}


id: GO:0021935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The early migration of granule cell precursors in which cells move orthogonal to the direction of radial migration and ultimately cover the superficial zone of the cerebellar primordium.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","PMID:15157725","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain tangential cell migration","termid":"GO:0021934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell precursor tangential migration","termid":"GO:0021935"}


id: PBO:0058458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5187","termid":"PBO:0058458"}


id: PBO:0041853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 3","termid":"PBO:0041853"}


id: FYPO:0001437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing antimycin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on antimycin A","synonyms":[{"name":"normal cell population growth in presence of antimycin A","type":"exact"},{"name":"normal cell population growth on antimycin A","type":"exact"},{"name":"normal cellular response to antimycin A","type":"related"},{"name":"normal vegetative cell population growth on antimycin A","type":"exact"}],"termid":"FYPO:0001437"}


id: GO:0000018
data:
  {"annotated_genes":["SJAG_00266","SJAG_00995","SJAG_02822","SJAG_01205","SJAG_02592","SJAG_03438","SJAG_04205","SJAG_03219","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105009,106266],"is_not":false,"summary":null,"term":"GO:0000018"},{"annotations":[103882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[103885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[87718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"},{"annotations":[84557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[105254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"},{"annotations":[84670,90013,112373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010520"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination, a DNA metabolic process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00995":null,"SJAG_01205":null,"SJAG_01677":null,"SJAG_02592":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03438":null,"SJAG_04205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000018","terms_by_termid":{"GO:0000018":null,"GO:0010520":null,"GO:0010569":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null,"GO:0045951":null}}


id: GO:0140949
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106439],"is_not":false,"summary":null,"term":"GO:0140949"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl9-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me3.","definition_xrefs":["RHEA:60276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008276","GO:0003674","GO:0016741","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3K9 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.355"],"synonyms":[{"name":"histone H3-K9 trimethylation","type":"broad"},{"name":"histone H3K9 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140949","terms_by_termid":{"GO:0140949":null}}


id: PBO:0051725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSYN1 antisense RNA 1","termid":"PBO:0051725"}


id: GO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070955"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of bacterium","type":"narrow"}],"termid":"GO:0070956"}


id: FYPO:0003423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial RNA measured in a cell is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level in mitochondrion","termid":"FYPO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased mitochondrial RNA level","synonyms":[{"name":"decreased RNA level in mitochondrion","type":"exact"},{"name":"decreased mitochondrial RNA accumulation","type":"related"},{"name":"decreased mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transcript level","type":"exact"},{"name":"reduced mitochondrial RNA level","type":"exact"}],"termid":"FYPO:0003423"}


id: CHEBI:47322
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE","termid":"CHEBI:47322"}


id: GO:0048812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"},{"relation_name":"part_of","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection morphogenesis","synonyms":[{"name":"neurite biosynthesis","type":"narrow"},{"name":"neurite formation","type":"narrow"},{"name":"neurite growth","type":"narrow"},{"name":"neurite morphogenesis","type":"related"}],"termid":"GO:0048812"}


id: GO:0120265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"},{"relation_name":"negatively_regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of chromosome attachment to the nuclear envelope","synonyms":[{"name":"down regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"down-regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"downregulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"inhibition of chromosome attachment to the nuclear envelope","type":"narrow"}],"termid":"GO:0120265"}


id: PBO:0017525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2, Gim4(predicted)","termid":"PBO:0017525"}


id: PBO:0034210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-differs_in_attribute","termid":"PBO:0034210"}


id: PBO:0048862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 7","termid":"PBO:0048862"}


id: PBO:0059595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 7","termid":"PBO:0059595"}


id: GO:2001234
data:
  {"annotated_genes":["SJAG_02875"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903298"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of apoptotic signaling pathway","termid":"GO:2001233"},{"relation_name":"negatively_regulates","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02875":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001234","terms_by_termid":{"GO:1903298":null}}


id: GO:1904851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of protein localization to telomere.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25467444","GOC:BHF_telomere","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to telomere","termid":"GO:0070203"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to chromosome, telomeric region","termid":"GO:1904816"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"establishment of protein localization to telomere","termid":"GO:0070200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein localization to telomere","synonyms":[{"name":"activation of establishment of protein localisation to telomere","type":"narrow"},{"name":"activation of establishment of protein localization to chromosome, telomeric region","type":"narrow"},{"name":"activation of establishment of protein localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"positive regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"up regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"up regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"up regulation of establishment of protein localization to telomere","type":"exact"},{"name":"up-regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"up-regulation of establishment of protein localization to telomere","type":"exact"},{"name":"upregulation of establishment of protein localisation to telomere","type":"exact"},{"name":"upregulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"upregulation of establishment of protein localization to telomere","type":"exact"}],"termid":"GO:1904851"}


id: FYPO:0007147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which Mei2 nuclear dot formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal Mei2 nuclear dot formation","synonyms":[{"name":"normal Mei2 nuclear dot assembly","type":"exact"},{"name":"normal meiRNA nuclear dot formation","type":"related"}],"termid":"FYPO:0007147"}


id: PBO:0057728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1303","termid":"PBO:0057728"}


id: PBO:0005378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, DUF2457 family","termid":"PBO:0005378"}


id: FYPO:0002103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has one nucleus and one septum, and is swollen and inviable. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell","termid":"FYPO:0002414"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000337","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000005","FYPO:0000641","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen mononucleate monoseptate vegetative cell","synonyms":[{"name":"inviable enlarged mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable large mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with increased cell volume","type":"exact"},{"name":"inviable swollen mononucleate monoseptate cell","type":"exact"},{"name":"inviable swollen mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable swollen mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; swollen mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002103"}


id: PR:P0CT37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-4 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.13c","synonyms":[{"name":"Spom972h-Tf2-4","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT37"}


id: GO:0050107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a monoterpenol = CoA + a monoterpenol acetate ester.","definition_xrefs":["EC:2.3.1.69","MetaCyc:MONOTERPENOL-O-ACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"monoterpenol O-acetyltransferase activity","synonyms":[{"name":"acetyl-CoA:monoterpenol O-acetyltransferase activity","type":"related"},{"name":"menthol transacetylase activity","type":"narrow"}],"termid":"GO:0050107"}


id: PR:P87238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cue1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.13c","synonyms":[{"name":"Spom972h-cue1","type":"exact"}],"termid":"PR:P87238"}


id: PBO:0071414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 20","termid":"PBO:0071414"}


id: PBO:0065238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 6","termid":"PBO:0065238"}


id: GO:0015802
data:
  {"annotated_genes":["SJAG_01336","SJAG_04715","SJAG_00877","SJAG_01923","SJAG_04983","SJAG_02716","SJAG_02029","SJAG_04725","SJAG_00051","SJAG_01636","SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85920],"is_not":false,"summary":null,"term":"GO:0015802"},{"annotations":[85919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[64002,99864,99865,93053,99862,83924,99863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[99671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[63233,94558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[98609,99675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[99676,105968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"basic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015802","terms_by_termid":{"GO:0015802":null,"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1901482":null,"GO:1903826":null,"GO:1990822":null}}


id: PBO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP2 pseudogene 1","termid":"PBO:0046293"}


id: FYPO:0002038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deadenylation-independent decapping of nuclear-transcribed mRNA is abnormal. This decapping process is cleavage of the 5'-cap of a nuclear-transcribed mRNA, independent of poly(A) tail shortening. All RNA decapping may be abnormal, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah","GO:0031087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002038"}


id: PATO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000480 positive regulation (obsolete PATO:0000480)","termid":"PATO:0000480"}


id: SO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_junction_loop","synonyms":[{"name":"RNA junction loop","type":"exact"}],"termid":"SO:0000026"}


id: PBO:0091838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0091838"}


id: PBO:0080166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 1","termid":"PBO:0080166"}


id: GO:0021662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 4. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 structural organization","synonyms":[{"name":"rhombomere 4 structural organisation","type":"exact"}],"termid":"GO:0021662"}


id: PBO:0081132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 divergent transcript","termid":"PBO:0081132"}


id: PBO:0040751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 2, pseudogene 1","termid":"PBO:0040751"}


id: PBO:0088648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator, RecA family ATPase Rad57/Rhp57","termid":"PBO:0088648"}


id: PBO:0067010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 18, pseudogene","termid":"PBO:0067010"}


id: PBO:0086247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may have a role in transcription elongation; forms a complex with Csn12p that is recruited to transcribed genes; possibly involved in splicing based on pre-mRNA accumulation defect for many intron-containing genes","termid":"PBO:0086247"}


id: PBO:0045390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 1","termid":"PBO:0045390"}


id: GO:0061854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuroblast migration.","definition_xrefs":["PMID:23149556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of neuroblast migration","termid":"GO:0061853"},{"relation_name":"positively_regulates","term_name":"neuroblast migration","termid":"GO:0097402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroblast migration","termid":"GO:0061854"}


id: PBO:0110049
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial MICOS interactor required for Cristae morphology","termid":"PBO:0110049"}


id: GO:1901591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair via break-induced replication.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via homologous recombination","termid":"GO:0010569"},{"relation_name":"regulates","term_name":"double-strand break repair via break-induced replication","termid":"GO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"regulation of double-strand break repair via break-induced replication","termid":"GO:1901591"}


id: GO:0015274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. The membrane is an organellar membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated chloride channel activity","termid":"GO:0005247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"organellar voltage-gated chloride channel activity","synonyms":[{"name":"organellar voltage gated chloride channel activity","type":"exact"},{"name":"organellar voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:0015274"}


id: PBO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal signal anchor","termid":"PBO:0000505"}


id: GO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall of seed trichomes after cell expansion is complete.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"seed trichome differentiation","termid":"GO:0090376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"secondary cell wall biogenesis involved in seed trichome differentiation","synonyms":[{"name":"secondary cell wall biosynthesis involved in seed trichome differentiation","type":"exact"},{"name":"seed trichome secondary wall biosynthesis","type":"related"}],"termid":"GO:0090379"}


id: PBO:0063862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 pseudogene 1","termid":"PBO:0063862"}


id: GO:1905610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GOC:PARL","GO_REF:0000059","GOC:TermGenie","PMID:23409027","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA binding","termid":"GO:1902415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA cap binding","termid":"GO:1905610"}


id: PBO:0034549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034549"}


id: PBO:0064883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 catalytic subunit beta pseudogene 1","termid":"PBO:0064883"}


id: PBO:0067461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 586, pseudogene","termid":"PBO:0067461"}


id: GO:0031424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns.","definition_xrefs":["GOC:ebc","GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinization","termid":"GO:0031424"}


id: PBO:0089319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER resident protein acetylase Sdg1","termid":"PBO:0089319"}


id: FYPO:0007063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any 23S rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PMID:29641590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased 23S rRNA precursor level","synonyms":[{"name":"increased 23S rRNA precursor accumulation","type":"related"},{"name":"increased 23S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 23S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 23S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0007063"}


id: FYPO:0006528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of hydrolysis of peptide bonds within a protein is decreased during the meiotic cell cycle. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased proteolysis during meiotic cell cycle","synonyms":[{"name":"decreased peptidolysis during meiotic cell cycle","type":"exact"},{"name":"decreased protein cleavage during meiotic cell cycle","type":"related"},{"name":"reduced proteolysis during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006528"}


id: GO:0061885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of mini excitatory postsynaptic potential. Mini excitatory postsynaptic potential is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell, induced by the spontaneous release of a single vesicle of an excitatory neurotransmitter into the synapse.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:20395454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mini excitatory postsynaptic potential","termid":"GO:0061884"},{"relation_name":"is_a","term_name":"positive regulation of excitatory postsynaptic potential","termid":"GO:2000463"},{"relation_name":"positively_regulates","term_name":"mini excitatory postsynaptic potential","termid":"GO:0098816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of mini excitatory postsynaptic potential","termid":"GO:0061885"}


id: GO:0075138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting oxygen tension in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host oxygen tension environment","synonyms":[{"name":"response of symbiont to host oxygen tension environment","type":"exact"}],"termid":"GO:0075138"}


id: PBO:0065749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 1","termid":"PBO:0065749"}


id: PBO:0073396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain bifurcated histone lysine methyltransferase 2","termid":"PBO:0073396"}


id: PBO:0046506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 2","termid":"PBO:0046506"}


id: PBO:0069942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1235, pseudogene","termid":"PBO:0069942"}


id: PBO:0051980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 3","termid":"PBO:0051980"}


id: PBO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Rum1","termid":"PBO:0004211"}


id: PBO:0038279
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0038279"}


id: PBO:0060337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 2","termid":"PBO:0060337"}


id: PBO:0044020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 2 pseudogene 1","termid":"PBO:0044020"}


id: GO:0032656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-13 production","secondary_identifiers":["GO:0045366","GO:2000665"],"synonyms":[{"name":"regulation of IL-13 production","type":"exact"},{"name":"regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-13 secretion","type":"narrow"}],"termid":"GO:0032656"}


id: PBO:0067318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 404, pseudogene","termid":"PBO:0067318"}


id: PBO:0073491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate lyase 1","termid":"PBO:0073491"}


id: PBO:0056404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 2","termid":"PBO:0056404"}


id: PBO:0060708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 5","termid":"PBO:0060708"}


id: PR:O14224
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rho GDP-dissociation inhibitor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho GDP-dissociation inhibitor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.06","secondary_identifiers":["UniProtKB:O14224"],"synonyms":[{"name":"Spom972h-ARHGDIG","type":"exact"},{"name":"rho GDI (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14224"}


id: GO:0045802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytoskeleton (obsolete GO:0045802)","synonyms":[{"name":"negative regulation of cytoskeleton","type":"exact"}],"termid":"GO:0045802"}


id: PR:Q9P3U6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.07c","synonyms":[{"name":"Spom972h-ght1","type":"exact"},{"name":"hexose transporter 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U6"}


id: PBO:0069256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 511, pseudogene","termid":"PBO:0069256"}


id: PBO:0017521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating activity Atg10","termid":"PBO:0017521"}


id: GO:0033567
data:
  {"annotated_genes":["SJAG_05232","SJAG_00618","SJAG_02294","SJAG_00198","SJAG_04183","SJAG_02199","SJAG_02690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96411,97288,99993,88216,96374,88124,90723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The DNA metabolic process, occurring during lagging strand synthesis, by which RNA primers are removed from Okazaki fragments, the resulting gaps filled by DNA polymerization, and the ends ligated to form a continuous strand.","definition_xrefs":["ISBN:0716720094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"lagging strand elongation","termid":"GO:0006273"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_04183":null,"SJAG_05232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA replication, Okazaki fragment processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033567","terms_by_termid":{"GO:1903461":null}}


id: FYPO:0002647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during mitosis (obsolete FYPO:0002647)","synonyms":[{"name":"decreased peptidyl-threonine phosphorylation during mitosis","type":"exact"},{"name":"decreased protein threonine phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein threonine phosphorylation during mitotic M phase during mitotic cell cycle","type":"related"},{"name":"decreased threonine phosphorylation during mitosis","type":"exact"},{"name":"reduced protein threonine phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0002647"}


id: PR:O43068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolin complex subunit mde4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.04","synonyms":[{"name":"Spom972h-mde4","type":"exact"},{"name":"mei4-dependent protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43068"}


id: MOD:00152
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S'-(8alpha-FAD)-L-cystine.","definition_xrefs":["RESID:AA0143","Unimod:50#C","PubMed:10220347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(8alpha-FAD)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]sulfanylpropanoic acid","type":"exact"},{"name":"8alpha-(S-cysteinyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES S-8alpha-FAD cysteine","type":"exact"},{"name":"S-(8alpha-FAD)-L-cysteine","type":"exact"},{"name":"S8aFADCys","type":"exact"}],"termid":"MOD:00152"}


id: SO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where there has been exchange of genetic material in the event of mitosis or meiosis","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"recombination feature","type":"exact"}],"termid":"SO:0000298"}


id: PBO:0056284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotically associated long non coding RNA","termid":"PBO:0056284"}


id: PBO:0109115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 9, His-X-His N1(pi)-histidine","termid":"PBO:0109115"}


id: PBO:0084582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL060C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL061C","termid":"PBO:0084582"}


id: PBO:0050621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 13","termid":"PBO:0050621"}


id: GO:0016681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor (obsolete GO:0016681)","secondary_identifiers":["EC:1.10.2.-"],"termid":"GO:0016681"}


id: GO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein-lipid complex, any macromolecular complex that contains both protein and lipid molecules.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein-lipid complex binding","termid":"GO:0071814"}


id: GO:0061273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric distal tubule are generated and organized. The mesonephric distal tubule is a mesonephric nephron tubule that begins at the macula densa and extends to the mesonephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"},{"relation_name":"is_a","term_name":"distal tubule morphogenesis","termid":"GO:0072156"},{"relation_name":"part_of","term_name":"mesonephric distal tubule development","termid":"GO:0061274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric distal tubule morphogenesis","termid":"GO:0061273"}


id: PBO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide synthase Aur1 (predicted)","termid":"PBO:0000480"}


id: PBO:0064129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKIA antisense RNA 1","termid":"PBO:0064129"}


id: GO:2000344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the acrosome reaction.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acrosome reaction","termid":"GO:0060046"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acrosome reaction","termid":"GO:2000344"}


id: PBO:0040071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 2","termid":"PBO:0040071"}


id: FYPO:0005896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"decreased protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"decreased protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin during G1 phase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005896"}


id: PBO:0047100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member B","termid":"PBO:0047100"}


id: MOD:01156
data:
  {"annotated_genes":["SJAG_02592","SJAG_04551","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115603,115296,115604,115605,115602,115295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[115669,115408,115345,115668,115670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"Modified amino acid residue derived from a natural amino acid by a real or hypothetical chemical process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_04551":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by chemical process","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"termid":"MOD:01156","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00046":null,"MOD:00696":null}}


id: FYECO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2-deoxyglucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2-DG","synonyms":[{"name":"2-deoxy-D-glucose added","type":"exact"},{"name":"2-deoxyglucose added","type":"exact"}],"termid":"FYECO:0000332"}


id: GO:0047674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-apiitol + NAD+ = D-apiose + H+ + NADH.","definition_xrefs":["RHEA:15301","EC:1.1.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"apiose 1-reductase activity","secondary_identifiers":["KEGG_REACTION:R03577","MetaCyc:APIOSE-1-REDUCTASE-RXN"],"synonyms":[{"name":"D-apiitol reductase activity","type":"related"},{"name":"D-apiitol:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"D-apiose reductase activity","type":"related"}],"termid":"GO:0047674"}


id: GO:1901942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-epi-alpha-bisabolol.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"(+)-epi-alpha-bisabolol metabolic process","termid":"GO:1901941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"(+)-epi-alpha-bisabolol catabolic process","synonyms":[{"name":"(+)-epi-alpha-bisabolol breakdown","type":"exact"},{"name":"(+)-epi-alpha-bisabolol catabolism","type":"exact"},{"name":"(+)-epi-alpha-bisabolol degradation","type":"exact"}],"termid":"GO:1901942"}


id: GO:0010154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit development","termid":"GO:0010154"}


id: GO:0110058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell differentiation.","definition_xrefs":["GOC:BHF","PMID:23072816","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell differentiation","termid":"GO:0045603"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell differentiation","termid":"GO:0110058"}


id: MOD:00643
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Artifact","definition_xrefs":["PubMed:11968134","Unimod:337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylamine Michael addition derivatized residue","synonyms":[{"name":"Methylamine","type":"related"},{"name":"Michael addition with methylamine","type":"related"}],"termid":"MOD:00643"}


id: PBO:0035923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0035923"}


id: PBO:0068841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 79, pseudogene","termid":"PBO:0068841"}


id: PBO:0058954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKNK1 antisense RNA 1","termid":"PBO:0058954"}


id: GO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:di","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to neutral pH","termid":"GO:0036176"}


id: GO:0003923
data:
  {"annotated_genes":["SJAG_05278","SJAG_03672","SJAG_03292","SJAG_00846","SJAG_02776"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82896,86930,87775,99545,110003],"is_not":false,"summary":null,"term":"GO:0003923"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor.","definition_xrefs":["ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_02776":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0008233","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"GPI-anchor transamidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162836"],"termid":"GO:0003923","terms_by_termid":{"GO:0003923":null}}


id: PBO:0068953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 197, pseudogene","termid":"PBO:0068953"}


id: PBO:0050967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1","termid":"PBO:0050967"}


id: PBO:0017627
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not a DNA polymerase delta subunit as initially detected in PMID:9326594","termid":"PBO:0017627"}


id: PBO:0000853
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.100","termid":"PBO:0000853"}


id: FYPO:0002003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["PomBase:mah","GO:0000978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished","type":"exact"},{"name":"abolished transcription factor binding to promoter region","type":"related"}],"termid":"FYPO:0002003"}


id: GO:0018490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (4-hydroxyphenyl)pyruvate + O2 = 2 (4-hydroxyphenyl)acetate + 2 CO2.","definition_xrefs":["EC:1.2.3.13","RHEA:17197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyphenylpyruvate oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0299","MetaCyc:1.2.3.13-RXN","KEGG_REACTION:R00042"],"synonyms":[{"name":"4-hydroxyphenylpyruvate:oxygen oxidoreductase (decarboxylating)","type":"broad"}],"termid":"GO:0018490"}


id: FYPO:0005092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has a greater length, diameter, and volume than normal, is shaped in the form of a pear, and undergoes two or more rounds of cell division and then dies. In a pear-shaped cell, one end is rounded, while the other resembles an end of a normal rod-shaped cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen pear-shaped vegetative cell","termid":"FYPO:0004965"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, swollen, elongated cell","termid":"FYPO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"}],"termid":"FYPO:0005092"}


id: GO:0098630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering together of unicellular organisms in suspension form aggregates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggregation of unicellular organisms","synonyms":[{"name":"aggregation of single cell organisms","type":"exact"}],"termid":"GO:0098630"}


id: GO:1904749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["PMID:24415760","GOC:BHF_telomere","GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to nucleolus","synonyms":[{"name":"regulation of protein localisation in nucleolus","type":"exact"},{"name":"regulation of protein localisation to nucleolus","type":"exact"},{"name":"regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904749"}


id: PBO:0055014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2429","termid":"PBO:0055014"}


id: PBO:0055667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 3","termid":"PBO:0055667"}


id: PBO:0045936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A1","termid":"PBO:0045936"}


id: PBO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha6","termid":"PBO:0048202"}


id: PBO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, involved in mitochondrial protein turnover (predicted)","termid":"PBO:0001069"}


id: PBO:0055031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2446","termid":"PBO:0055031"}


id: GO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory tube development","termid":"GO:0030323"}


id: PR:O14035
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.14c gene.","definition_xrefs":["UniProtKB:O14035","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C29B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.14c","synonyms":[{"name":"Spom972h-SPAC29B12.14c","type":"exact"}],"termid":"PR:O14035"}


id: PBO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A7","termid":"PBO:0047004"}


id: FYPO:0006721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Cdr2 medial cortical node complex does not occur.","definition_xrefs":["PomBase:mah","PMID:28924043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to Cdr2 medial cortical node complex","synonyms":[{"name":"abolished protein localisation to Cdr2 medial cortical node complex","type":"exact"},{"name":"abolished protein localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"protein absent from Cdr2 medial cortical node complex","type":"related"},{"name":"protein localization to Cdr2 medial cortical node complex abolished","type":"exact"},{"name":"protein localization to Cdr2 medial cortical node complex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006721"}


id: GO:0032807
data:
  {"annotated_genes":["SJAG_02237","SJAG_02527","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95680,109945,112409],"is_not":false,"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved protein complex that contains DNA ligase IV and is involved in DNA repair by non-homologous end joining; in addition to the ligase, the complex also contains XRCC4 or a homolog, e.g. Saccharomyces Lif1p.","definition_xrefs":["PMID:16314503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonhomologous end joining complex","termid":"GO:0070419"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"DNA ligase IV complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA ligase IV-XRCC4 complex","type":"exact"}],"termid":"GO:0032807","terms_by_termid":{"GO:0032807":null}}


id: PR:O13897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C22A12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.06c","synonyms":[{"name":"Spom972h-SPAC22A12.06c","type":"exact"}],"termid":"PR:O13897"}


id: PBO:0004324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)/GCN5-related N acetyltransferase fusion protein","termid":"PBO:0004324"}


id: PBO:0054107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1472","termid":"PBO:0054107"}


id: PBO:0065625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 3","termid":"PBO:0065625"}


id: GO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + dTTP = diphosphate + dTDP-D-galactose.","definition_xrefs":["RHEA:17165","EC:2.7.7.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.32-RXN","KEGG_REACTION:R02329"],"synonyms":[{"name":"dTDP galactose pyrophosphorylase activity","type":"related"},{"name":"dTDP-galactose diphosphorylase activity","type":"related"},{"name":"dTDP-galactose pyrophosphorylase activity","type":"related"},{"name":"dTTP:alpha-D-galactose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate thymidylyl transferase activity","type":"related"},{"name":"thymidine diphosphogalactose pyrophosphorylase activity","type":"related"},{"name":"thymidine triphosphate:alpha-D-galactose 1-phosphate thymidylyltransferase activity","type":"related"}],"termid":"GO:0047342"}


id: PBO:0084278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein, member of the p24 family; forms complex with Erp3p, Erp5p, and Emp24p; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription","termid":"PBO:0084278"}


id: PBO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily B member 1","termid":"PBO:0052111"}


id: GO:0003706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II in response to a ligand.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand-regulated transcription factor activity (obsolete GO:0003706)","synonyms":[{"name":"ligand-regulated transcription factor activity","type":"exact"}],"termid":"GO:0003706"}


id: PBO:0027184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_F-actin_level_in_actomyosin_contractile_ring_during_anaphase_B","termid":"PBO:0027184"}


id: PR:P21911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00778","PRO:DNx","PANTHER:PTHR11921:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.01","secondary_identifiers":["UniProtKB:P21911"],"synonyms":[{"name":"Ip (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SDHB","type":"exact"},{"name":"iron-sulfur subunit of complex II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21911"}


id: PBO:0089335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine kinase Eki1","termid":"PBO:0089335"}


id: PR:O74518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.12","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid12","type":"exact"},{"name":"caffeine-induced death protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74518"}


id: PBO:0076732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 1","termid":"PBO:0076732"}


id: GO:0042968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"homoserine transport","termid":"GO:0042968"}


id: PBO:0073850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3 3' UTR overlapping transcript 1","termid":"PBO:0073850"}


id: PBO:0109369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4C","termid":"PBO:0109369"}


id: PR:O42939
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-activating enzyme subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10953:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme E1-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.03c","secondary_identifiers":["UniProtKB:O42939"],"synonyms":[{"name":"SPBC16H5.03c","type":"related"},{"name":"Spom972h-UBA2","type":"exact"},{"name":"pmt3-activating enzyme subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42939"}


id: PBO:0069716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 996, pseudogene","termid":"PBO:0069716"}


id: PBO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp15","termid":"PBO:0003367"}


id: GO:0046868
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular, often complex, membranous structure, sometimes with additional membranous lamellae inside, found in bacteria. They are associated with synthesis of DNA and secretion of proteins.","definition_xrefs":["PMID:33327493","PMID:31921091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"mesosome","secondary_identifiers":["Wikipedia:Mesosome"],"termid":"GO:0046868"}


id: PBO:0056041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene C4 synthase","termid":"PBO:0056041"}


id: GO:0002727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of natural killer cell cytokine production","synonyms":[{"name":"regulation of NK cell cytokine production","type":"exact"}],"termid":"GO:0002727"}


id: PBO:0012543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_on_population_of","termid":"PBO:0012543"}


id: GO:1902001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fatty acid is transported across a membrane.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:9395310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"fatty acid transmembrane transport","termid":"GO:1902001"}


id: GO:0071388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisone stimulus. Cortisone is a natural glucocorticoid steroid hormone that is metabolically convertible to cortisol. Cortisone is synthesized from cholesterol in the cortex of the adrenal gland under the stimulation of adrenocorticotropin hormone (ACTH). The main physiological effect of cortisone is on carbohydrate metabolism; it can stimulate increased glucose release from the liver, increased liver glycogen synthesis, and decreased utilization of glucose by the tissues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cortisone","termid":"GO:0051413"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cortisone stimulus","termid":"GO:0071388"}


id: PBO:0061646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 4","termid":"PBO:0061646"}


id: PBO:0034514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow_rim","termid":"PBO:0034514"}


id: GO:0140584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA translocase activity that folds chromosomal DNA and catalytically extends the newly formed loop, driven by ATP hydrolysis.","definition_xrefs":["PMID:23074191","PMID:26499245","PMID:27210764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA translocase activity","termid":"GO:0015616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chromatin extrusion motor activity","synonyms":[{"name":"chromatin extrusion activity","type":"exact"}],"termid":"GO:0140584"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: GO:0051705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism has a behavioral effect on another organism of the same or different species.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism behavior (obsolete GO:0051705)","synonyms":[{"name":"behavioral interaction between organisms","type":"exact"},{"name":"behavioral interaction with other organism","type":"exact"},{"name":"behavioral signaling","type":"narrow"},{"name":"behavioral signalling","type":"narrow"},{"name":"behavioural interaction between organisms","type":"exact"},{"name":"behavioural interaction with other organism","type":"exact"}],"termid":"GO:0051705"}


id: PBO:0007885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein Slm1 (predicted)","termid":"PBO:0007885"}


id: PBO:0064859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R15B and PIK3C2B antisense RNA 1","termid":"PBO:0064859"}


id: PBO:0058584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6717","termid":"PBO:0058584"}


id: GO:0030996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of nitrogen.","definition_xrefs":["GOC:mah","GOC:vw","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle arrest in response to nitrogen starvation (obsolete GO:0030996)","synonyms":[{"name":"cell cycle arrest in response to nitrogen starvation","type":"broad"}],"termid":"GO:0030996"}


id: PBO:0043358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claspin","termid":"PBO:0043358"}


id: PBO:0059186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRFAP1 pseudogene 1","termid":"PBO:0059186"}


id: PBO:0090545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S21","termid":"PBO:0090545"}


id: GO:0060283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of oocyte development","termid":"GO:0060281"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oocyte development","termid":"GO:0060283"}


id: PBO:0065353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 3","termid":"PBO:0065353"}


id: PBO:0071780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 8","termid":"PBO:0071780"}


id: PBO:0085539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication","termid":"PBO:0085539"}


id: MOD:00054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-acetyl-L-glutamine.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-glutamine","synonyms":[{"name":"(2S)-2-acetamido-5-pentanediamic acid","type":"exact"},{"name":"2-acetylamino-5-amino-5-oxopentanoic acid","type":"exact"},{"name":"2-acetylamino-5-pentanediamic acid","type":"exact"},{"name":"2-acetylazanyl-5-azanyl-5-oxopentanoic acid","type":"exact"},{"name":"AcGln","type":"exact"},{"name":"N-acetyl-L-glutamine","type":"exact"},{"name":"N-acetylated L-glutamine","type":"exact"},{"name":"acetylglutamine","type":"exact"}],"termid":"MOD:00054"}


id: PBO:0080302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 66 pseudogene","termid":"PBO:0080302"}


id: GO:0046631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation","synonyms":[{"name":"alpha-beta T lymphocyte activation","type":"exact"},{"name":"alpha-beta T-cell activation","type":"exact"},{"name":"alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046631"}


id: PR:O74917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.06 gene.","definition_xrefs":["UniProtKB:O74917","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.06","synonyms":[{"name":"Spom972h-SPCC757.06","type":"exact"}],"termid":"PR:O74917"}


id: PBO:0082860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of TRAPP complexes I, II and IV; transport protein particle (TRAPP) complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII, and IV); proposed subunit of a novel complex, TRAPPIV, that may function redundantly with TRAPPIII as a GEF that activates Ypt1 during autophagy","termid":"PBO:0082860"}


id: PBO:0055912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 36","termid":"PBO:0055912"}


id: PBO:0070272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 7","termid":"PBO:0070272"}


id: PBO:0038376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-root_parasite_of","termid":"PBO:0038376"}


id: PBO:0049719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4 pseudogene 1","termid":"PBO:0049719"}


id: GO:0070074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle that forms part of the apical complex; a small, threadlike structure located is close proximity to the subpellicular microtubules. Its contents include a rhomboid protease (PfROM1 in Plasmodium falciparum) that moves from the lateral asymmetric localization to the merozoite apical pole and the posterior pole upon release of merozoites from schizonts.","definition_xrefs":["GOC:BHF","PMID:18048320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mononeme","termid":"GO:0070074"}


id: PBO:0061739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2 pseudogene 1","termid":"PBO:0061739"}


id: PBO:0039475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18E, pseudogene","termid":"PBO:0039475"}


id: PBO:0109616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 16, pseudogene","termid":"PBO:0109616"}


id: SO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with mRNA recoded by translational bypass.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded_by_translational_bypass","termid":"SO:0000886"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_mRNA_recoded_by_translational_bypass","synonyms":[{"name":"gene with mRNA recoded by translational bypass","type":"exact"}],"termid":"SO:0000711"}


id: FYECO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a fatty acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:alock"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ fatty acid","termid":"FYECO:0000042"}


id: PBO:0036265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A thioesterase","termid":"PBO:0036265"}


id: FYPO:0007527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell tip is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:27746023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to cell tip during nitrogen starvation","synonyms":[{"name":"increased protein localization to cell tip during nitrogen depletion","type":"exact"},{"name":"increased protein localization to cell tip during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007527"}


id: PBO:0048056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 5","termid":"PBO:0048056"}


id: GO:0007516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hemocyte over time, from its formation to the mature structure. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte development","synonyms":[{"name":"arthropod blood cell development","type":"exact"}],"termid":"GO:0007516"}


id: PBO:0026960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_localization","termid":"PBO:0026960"}


id: SO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A supercontig that is not been assigned to any ultracontig during a genome assembly project.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supercontig","termid":"SO:0000148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unassigned_supercontig","synonyms":[{"name":"unassigned scaffold","type":"related"},{"name":"unassigned supercontig","type":"exact"}],"termid":"SO:0001875"}


id: PBO:0034415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_specification_of","termid":"PBO:0034415"}


id: GO:1904886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a beta-catenin destruction complex into its constituent components.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:23169527","GOC:PARL","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"beta-catenin destruction complex disassembly","synonyms":[{"name":"23S APC complex disassembly","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex disassembly","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex disassembly","type":"exact"},{"name":"BDC disassembly","type":"exact"},{"name":"beta-catenin degradation complex disassembly","type":"exact"},{"name":"dissociation of beta-catenin degradation complex","type":"exact"}],"termid":"GO:1904886"}


id: PBO:0001682
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Swi5 independently of Rhp57","termid":"PBO:0001682"}


id: GO:0060935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}


id: PBO:0035937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_methylation_during_vegetative_growth","termid":"PBO:0035937"}


id: PBO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI family protein","termid":"PBO:0003346"}


id: PBO:0087169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C82","termid":"PBO:0087169"}


id: PR:Q9Y700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Tu 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03013","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Tu, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.04c","secondary_identifiers":["UniProtKB:Q9Y700"],"synonyms":[{"name":"Spom972h-tufB","type":"exact"}],"termid":"PR:Q9Y700"}


id: PATO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000157 absolute temporal (obsolete PATO:0000157)","termid":"PATO:0000157"}


id: PBO:0089847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, protein phosphatase regulatory subunit","termid":"PBO:0089847"}


id: PBO:0053238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL3 antisense RNA 1","termid":"PBO:0053238"}


id: GO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with serotonin and transmitting the signal across the membrane by activation of the Gq/11 subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gq/11 subunit subsequently activates phospholipase C and results in an increase in inositol triphosphate (IP3) levels.","definition_xrefs":["GOC:bf","PMID:18571247","PMID:18703043","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor activity","termid":"GO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"Gq/11-coupled serotonin receptor activity","synonyms":[{"name":"5-HT2 receptor activity","type":"broad"},{"name":"serotonin receptor activity, coupled via Gq/11","type":"exact"}],"termid":"GO:0001587"}


id: PBO:0072135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 12","termid":"PBO:0072135"}


id: GO:0023030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class Ib molecules via the antigen binding groove.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class Ib protein binding","termid":"GO:0023029"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex binding","termid":"GO:0023025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class Ib protein binding, via antigen binding groove","termid":"GO:0023030"}


id: PBO:0027168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation","termid":"PBO:0027168"}


id: PBO:0052745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 37","termid":"PBO:0052745"}


id: PBO:0082779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sum1p-Rfm1p-Hst1p complex; Rfm1p tethers the Hst1p histone deacetylase to the DNA-binding protein Sum1p; complex is involved in transcriptional repression of middle sporulation genes and in initiation of DNA replication","termid":"PBO:0082779"}


id: PBO:0027733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0027733"}


id: MOD:01563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01563"}


id: GO:0098029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short structure attached to an icosahedral virion capsid, and used for attachment to the host cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, spike","termid":"GO:0098029"}


id: PBO:0088286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1774 family multi-spanning conserved fungal membrane protein","termid":"PBO:0088286"}


id: PBO:0077703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin C2, fast skeletal type","termid":"PBO:0077703"}


id: GO:0043108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of withdrawing a pilus back into a cell.","definition_xrefs":["PMID:17355871","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus organization","termid":"GO:0043711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pilus retraction","termid":"GO:0043108"}


id: PBO:0080341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 105 pseudogene","termid":"PBO:0080341"}


id: PBO:0056697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis initiator","termid":"PBO:0056697"}


id: SO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","definition_xrefs":["NCBI:th","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation","synonyms":[{"name":"transchr","type":"related"},{"name":"translocated sequence","type":"exact"}],"termid":"SO:0000199"}


id: GO:1990327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXV) chains; type XXV collagen triple helices span the plasma membrane.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"collagen type XXV trimer","termid":"GO:1990327"}


id: PBO:0087432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit c'' of the vacuolar ATPase; v-ATPase functions in acidification of the vacuole; one of three proteolipid subunits of the V0 domain","termid":"PBO:0087432"}


id: PBO:0034027
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_curator_email","termid":"PBO:0034027"}


id: GO:0035623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which glucose is taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["PMID:11269503","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"},{"relation_name":"is_a","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"renal glucose absorption","synonyms":[{"name":"glucose reabsorption","type":"exact"},{"name":"nephron glucose absorption","type":"exact"}],"termid":"GO:0035623"}


id: PBO:0071292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 15","termid":"PBO:0071292"}


id: PBO:0090130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type zinc finger protein and glutamine sensor Pib2","termid":"PBO:0090130"}


id: PBO:0057197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 370","termid":"PBO:0057197"}


id: PBO:0091922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo Sfi1 Interactor","termid":"PBO:0091922"}


id: GO:0018040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glutamic acid amide by hydrolysis and oxidation of an interior Glu-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0087"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamic acid amidation (obsolete GO:0018040)","termid":"GO:0018040"}


id: PBO:0053427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 370","termid":"PBO:0053427"}


id: GO:0006428
data:
  {"annotated_genes":["SJAG_03545","SJAG_04285"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108635,112127],"is_not":false,"summary":null,"term":"GO:0006428"}]},"cv_name":"biological_process","definition":"The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. The isoleucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a isoleucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03545":null,"SJAG_04285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"isoleucyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006428","terms_by_termid":{"GO:0006428":null}}


id: GO:0035100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 20-hydroxyecdysone (ecdysone). Ecdysone is an ecdysteroid produced by the prothoracic glands of immature insects and the ovaries of adult females, which stimulates growth and molting.","definition_xrefs":["ISBN:0198506732","ISBN:0582227089","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol binding","termid":"GO:0032934"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"ecdysone binding","termid":"GO:0035100"}


id: PBO:0080713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing antisense to TP53","termid":"PBO:0080713"}


id: PBO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crooked neck pre-mRNA splicing factor 1","termid":"PBO:0043918"}


id: GO:0031043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 7 O-glycan structure, GalNAc-alpha-(1->6)-GalNAc.","definition_xrefs":["GOC:mah","PMID:10580130","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"O-glycan processing, core 7","termid":"GO:0031043"}


id: PBO:0090515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 and Swr1 complex YEATS family subunit Yaf9","termid":"PBO:0090515"}


id: PBO:0049759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C1 regulator 1","termid":"PBO:0049759"}


id: PBO:0005035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR domain protein, possibly involved in DNA repair","termid":"PBO:0005035"}


id: PBO:0038310
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_first_sent_to_curator_date","termid":"PBO:0038310"}


id: FYPO:0007016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of rRNA genes in ribosomal DNA repeat regions is increased.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at rDNA","termid":"FYPO:0004032"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of rRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of rRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of ribosomal RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at rRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007016"}


id: PBO:0056772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 22, Kin17 lysine","termid":"PBO:0056772"}


id: PBO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxypyruvate isomerase (putative)","termid":"PBO:0050826"}


id: PBO:0042099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 170","termid":"PBO:0042099"}


id: GO:0102737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 4-coumaryl-CoA + H2O + 3 malonyl-CoA = 4 coenzyme A + 3 carbon dioxide + p-coumaroyltriacetate.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"p-coumaroyltriacetic acid synthase activity","secondary_identifiers":["MetaCyc:RXN-7577"],"termid":"GO:0102737"}


id: GO:0009854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reactions of the C2 pathway bring about the metabolic conversion of two molecules of 2-phosphoglycolate to one molecule of 3-phosphoglycerate, which can be used by the C3 cycle, and one molecule of carbon dioxide (CO2).","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"},{"relation_name":"part_of","term_name":"photorespiration","termid":"GO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative photosynthetic carbon pathway","termid":"GO:0009854"}


id: PBO:0051331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-26 (pseudogene)","termid":"PBO:0051331"}


id: FYPO:0001616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular valine level","synonyms":[{"name":"decreased cellular L-valine level","type":"exact"},{"name":"decreased cellular valine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular valine level during vegetative growth","type":"exact"},{"name":"decreased level of valine in cell","type":"exact"},{"name":"reduced cellular valine level","type":"exact"},{"name":"reduced level of valine in cell","type":"exact"}],"termid":"FYPO:0001616"}


id: PBO:0027061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endo-1,6-beta-glucosidase_activity","termid":"PBO:0027061"}


id: GO:0000963
data:
  {"annotated_genes":["SJAG_00797","SJAG_06586","SJAG_03104","SJAG_04113","SJAG_00865","SJAG_02302","SJAG_00077","SJAG_02288","SJAG_02526","SJAG_00428","SJAG_04700","SJAG_00358","SJAG_02991","SJAG_01704","SJAG_00255","SJAG_04367","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99443],"is_not":false,"summary":null,"term":"GO:0000963"},{"annotations":[91934,106554,85472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[105839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"},{"annotations":[94700,110486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000965"},{"annotations":[109942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[114012,105840,83199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[97164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[110294,114706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[89901,113058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[88413,104396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The conversion of a primary RNA molecule transcribed from a mitochondrial genome into one or more mature RNA molecules; occurs in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00428":null,"SJAG_00797":null,"SJAG_00865":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02526":null,"SJAG_02991":null,"SJAG_03104":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial RNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000963","terms_by_termid":{"GO:0000963":null,"GO:0000964":null,"GO:0000965":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0140040":null,"GO:1990180":null,"GO:1990799":null}}


id: PBO:0076457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 3","termid":"PBO:0076457"}


id: GO:0110091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["GOC:sl","PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"},{"relation_name":"negatively_regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hippocampal neuron apoptotic process","termid":"GO:0110091"}


id: PBO:0049290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 9, pseudogene","termid":"PBO:0049290"}


id: RO:0008501
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship wherein a plant or algae is living on the outside surface of another plant.","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyte_of","termid":"RO:0008501"}


id: GO:2000860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aldosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mineralocorticoid secretion","termid":"GO:2000857"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"positively_regulates","term_name":"aldosterone secretion","termid":"GO:0035932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of aldosterone secretion","termid":"GO:2000860"}


id: PBO:0026657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-heterochromatin_assembly_beyond_boundary_element_IRC1L","termid":"PBO:0026657"}


id: PBO:0042660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 16, tectorial membrane component","termid":"PBO:0042660"}


id: PBO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Chp1","termid":"PBO:0001418"}


id: PBO:0044884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND10 pseudogene 1","termid":"PBO:0044884"}


id: GO:0036080
data:
  {"annotated_genes":["SJAG_00339","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88957,84473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[84474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleotide-sugar from one side of a membrane to the other. Purine nucleotide-sugars are purine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["PMID:19948734","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar transmembrane transporter activity","termid":"GO:0005338"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"purine nucleotide-sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036080","terms_by_termid":{"GO:0005457":null,"GO:0005458":null}}


id: GO:1901388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta activation","termid":"GO:0036363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of transforming growth factor beta activation","synonyms":[{"name":"regulation of L-TGF-beta activation","type":"exact"},{"name":"regulation of TGF-B activation","type":"exact"},{"name":"regulation of TGF-beta activation","type":"exact"},{"name":"regulation of TGFB activation","type":"exact"},{"name":"regulation of TGFbeta activation","type":"exact"},{"name":"regulation of latent TGF-beta activation","type":"exact"}],"termid":"GO:1901388"}


id: PBO:0079282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTLL1 antisense RNA 1","termid":"PBO:0079282"}


id: GO:0004972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An cation channel that opens in response to binding by extracellular glutmate, but only if glycine is also bound and the membrane is depolarized. Voltage gating is indirect, due to ejection of bound magnesium from the pore at permissive voltages.","definition_xrefs":["GOC:mah","PMID:10049997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0038023","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"NMDA glutamate receptor activity","secondary_identifiers":["Wikipedia:NMDA_receptor"],"synonyms":[{"name":"N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"NMDA receptor","type":"exact"}],"termid":"GO:0004972"}


id: PBO:0077813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 pathway corepressor 1","termid":"PBO:0077813"}


id: PBO:0063962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase like 1","termid":"PBO:0063962"}


id: PBO:0031549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rDNA_separation","termid":"PBO:0031549"}


id: PBO:0058068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4287","termid":"PBO:0058068"}


id: PBO:0004231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt4","termid":"PBO:0004231"}


id: MOD:01232
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(12)C labeled N6-propanoyl-L-lysine.","definition_xrefs":["PubMed:11857757","Unimod:58#K","PubMed:11999733","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-propanoyl-L-lysine","termid":"MOD:01398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"3x(12)C labeled N6-propanoyl-L-lysine","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:01232"}


id: GO:0048540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bursa of Fabricius over time, from its formation to the mature structure. The bursa of Fabricius is an organ found in birds involved in B cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bursa of Fabricius development","termid":"GO:0048540"}


id: PBO:0017846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea transmembrane transporter (predicted)","termid":"PBO:0017846"}


id: PR:Q9UUA2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent DNA helicase PIF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23274:SF0","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase pfh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.14c","secondary_identifiers":["UniProtKB:Q9UUA2"],"synonyms":[{"name":"DNA repair and recombination helicase pfh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIF1 helicase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RRM3/PIF1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC887.14c","type":"related"},{"name":"Spom972h-PIF1","type":"exact"},{"name":"pif1","type":"related"},{"name":"rph1","type":"related"}],"termid":"PR:Q9UUA2"}


id: PBO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity_during_cellular_hyperosmotic_response","termid":"PBO:0030355"}


id: PBO:0015248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi3","termid":"PBO:0015248"}


id: PR:P87120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P protein subunit p30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00574","PANTHER:PTHR13031:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.04c","secondary_identifiers":["UniProtKB:P87120"],"synonyms":[{"name":"Spom972h-RPP30","type":"exact"}],"termid":"PR:P87120"}


id: FYPO:0002449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer signal recognition particles (SRPs) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"signal recognition particles present in decreased numbers","synonyms":[{"name":"SRPs present in decreased numbers","type":"exact"},{"name":"decreased level of SRPs","type":"related"},{"name":"decreased signal recognition particle formation during vegetative growth","type":"related"},{"name":"fewer signal recognition particles present during vegetative growth","type":"exact"},{"name":"signal recognition particles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"signal recognition particles present in decreased numbers during vegetative growth","type":"exact"},{"name":"signal recognition particles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002449"}


id: PBO:0044400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 61, pseudogene","termid":"PBO:0044400"}


id: GO:0017075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a syntaxin-1 SNAP receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syntaxin binding","termid":"GO:0019905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"syntaxin-1 binding","termid":"GO:0017075"}


id: GO:0030511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0017015"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of cellular response to transforming growth factor beta stimulus","termid":"GO:1903846"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta receptor signaling pathway","synonyms":[{"name":"activation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"positive regulation of TGF-beta receptor signaling pathway","type":"exact"},{"name":"positive regulation of TGFbeta receptor signaling pathway","type":"exact"},{"name":"positive regulation of transforming growth factor beta receptor signalling pathway","type":"exact"},{"name":"stimulation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"up regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"up-regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"upregulation of transforming growth factor beta receptor signaling pathway","type":"exact"}],"termid":"GO:0030511"}


id: PBO:0076452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAGAP antisense RNA 1","termid":"PBO:0076452"}


id: PBO:0074878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 58C","termid":"PBO:0074878"}


id: PBO:0051613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 gamma","termid":"PBO:0051613"}


id: PBO:0042082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 149","termid":"PBO:0042082"}


id: GO:0019918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of methylation of peptidyl-arginine to form peptidyl-N(omega),N'(omega)-dimethyl-L-arginine.","definition_xrefs":["RESID:AA0069","RESID:AA0067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine omega-N-methylation","termid":"GO:0035247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine methylation, to symmetrical-dimethyl arginine","termid":"GO:0019918"}


id: SO:1000149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal mutation whereby the (large) region between the first two breaks listed is lost, and the two flanking segments (one of them centric) are joined as a translocation to the free ends resulting from the third break.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"},{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite_duplication","synonyms":[{"name":"(Drosophila)bDp","type":"related"},{"name":"bipartite duplication","type":"exact"}],"termid":"SO:1000149"}


id: PBO:0054056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1398","termid":"PBO:0054056"}


id: PBO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (predicted)","termid":"PBO:0000418"}


id: PBO:0043048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 5","termid":"PBO:0043048"}


id: GO:0106185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 37 of the histone.","definition_xrefs":["GOC:mah","PMID:30773398"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K37 methylation (obsolete GO:0106185)","synonyms":[{"name":"histone H3 K37 methylation","type":"exact"},{"name":"histone H3K37me","type":"exact"},{"name":"histone lysine H3 K37 methylation","type":"exact"}],"termid":"GO:0106185"}


id: GO:0018723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenanthrol + X-SO3(-) = HX + 3-phenanthrylsulfate.","definition_xrefs":["UM-BBD_reactionID:r0561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrol sulfotransferase activity","termid":"GO:0019111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-phenanthrol sulfotransferase activity","synonyms":[{"name":"3-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018723"}


id: RO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasite_of","synonyms":[{"name":"epiparasite of","type":"related"},{"name":"hyperparasitoid of","type":"related"}],"termid":"RO:0002553"}


id: GO:0030963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dihydroxylation of peptidyl-lysine to peptidyl-4,5-dihydroxy-L-lysine.","definition_xrefs":["RESID:AA0370","PMID:10978343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine dihydroxylation to 4,5-dihydroxy-L-lysine","termid":"GO:0030963"}


id: PBO:0081965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZPR1 zinc finger","termid":"PBO:0081965"}


id: PBO:0011412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inhibited_by","termid":"PBO:0011412"}


id: PBO:0003865
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eleven-nineteen Lysine rich in Leukemia","termid":"PBO:0003865"}


id: PBO:0031416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell-substrate_adhesion","termid":"PBO:0031416"}


id: PBO:0042115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 187","termid":"PBO:0042115"}


id: PBO:0080480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 3-1, pseudogene","termid":"PBO:0080480"}


id: PBO:0086312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with role in regulation of MBF-specific transcription at Start; phosphorylated by Cln-Cdc28p kinases in vitro; unphosphorylated form binds Swi6p, which is required for Stb1p function; expression is cell-cycle regulated; STB1 has a paralog, YOL131W, that arose from the whole genome duplication","termid":"PBO:0086312"}


id: GO:1900242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle endocytosis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"regulates","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of synaptic vesicle endocytosis","synonyms":[{"name":"regulation of synaptic vesicle retrieval","type":"related"}],"termid":"GO:1900242"}


id: GO:2000186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"regulation of phosphate transmembrane transport","termid":"GO:2000185"},{"relation_name":"negatively_regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of phosphate transmembrane transport","synonyms":[{"name":"negative regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000186"}


id: GO:0080041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribose + H2O = AMP + ribose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ADP-ribose pyrophosphohydrolase activity","termid":"GO:0080041"}


id: PATO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-invasive","termid":"PATO:0002132"}


id: PBO:0056373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1 pseudogene 1","termid":"PBO:0056373"}


id: PBO:0079644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Q family like 1","termid":"PBO:0079644"}


id: PBO:0091519
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae Hys2","termid":"PBO:0091519"}


id: GO:0019120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid halide bond in substances containing halogen atoms in organic linkage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds","termid":"GO:0016824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","secondary_identifiers":["Reactome:R-HSA-9011595","EC:3.8.1.-"],"termid":"GO:0019120"}


id: GO:0002838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to tumor cell","termid":"GO:0002835"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune response to tumor cell","synonyms":[{"name":"down regulation of immune response to tumor cell","type":"exact"},{"name":"down-regulation of immune response to tumor cell","type":"exact"},{"name":"downregulation of immune response to tumor cell","type":"exact"},{"name":"inhibition of immune response to tumor cell","type":"narrow"},{"name":"negative regulation of immune response to tumour cell","type":"exact"}],"termid":"GO:0002838"}


id: PBO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_unknown","termid":"PBO:0034695"}


id: PBO:0049499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 6","termid":"PBO:0049499"}


id: PBO:0073694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 6","termid":"PBO:0073694"}


id: PBO:0073386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 2, histone lysine methyltransferase","termid":"PBO:0073386"}


id: PBO:0017696
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptide Trna Hydrolase","termid":"PBO:0017696"}


id: PBO:0078986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon CTA) 2-1","termid":"PBO:0078986"}


id: SO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A (unitary) pseudogene that is stable in the population but importantly it has a functional alternative allele also in the population. i.e., one strain may have the gene, another strain may have the pseudogene. MHC haplotypes have allelic pseudogenes.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelic_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:allelic","type":"exact"},{"name":"allelic pseudogenic rRNA","type":"exact"}],"termid":"SO:0002196"}


id: PBO:0072077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 7","termid":"PBO:0072077"}


id: PBO:0017405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, uncharacterized","termid":"PBO:0017405"}


id: PBO:0080963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 6","termid":"PBO:0080963"}


id: PBO:0091097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF ATP-dependent chromatin remodeler Snf22","termid":"PBO:0091097"}


id: GO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + toluene = 2-benzylsuccinate.","definition_xrefs":["EC:4.1.99.11","RHEA:10416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"benzylsuccinate synthase activity","secondary_identifiers":["KEGG_REACTION:R05598","MetaCyc:RXN-863","UM-BBD_enzymeID:e0259"],"synonyms":[{"name":"benzylsuccinate fumarate-lyase (toluene-forming)","type":"related"},{"name":"benzylsuccinate fumarate-lyase activity","type":"related"}],"termid":"GO:0018805"}


id: PBO:0046473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELKS/RAB6-interacting/CAST family member 1","termid":"PBO:0046473"}


id: PBO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Pss1","termid":"PBO:0001237"}


id: PATO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's catalytic activity divided by the volume of the system.","definition_xrefs":["IUPAC:IUPAC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic (activity) concentration","termid":"PATO:0001674"}


id: GO:0007448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the imaginal disc. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that rapidly develop into adult appendages during metamorphosis from larval to adult form.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}


id: PBO:0062917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y1","termid":"PBO:0062917"}


id: PBO:0091022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type transcription factor (Mc-like)","termid":"PBO:0091022"}


id: GO:1904221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:16120614","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of serine C-palmitoyltransferase activity","termid":"GO:1904220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"down regulation of SPT","type":"related"},{"name":"down regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"down regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"down regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"down regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"down-regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"down-regulation of SPT","type":"related"},{"name":"down-regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"down-regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"down-regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"downregulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"downregulation of SPT","type":"related"},{"name":"downregulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"downregulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"downregulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"inhibition of 3-oxosphinganine synthetase activity","type":"narrow"},{"name":"inhibition of SPT","type":"related"},{"name":"inhibition of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"inhibition of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"narrow"},{"name":"inhibition of serine C-palmitoyltransferase activity","type":"narrow"},{"name":"negative regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"negative regulation of SPT","type":"related"},{"name":"negative regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"negative regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"}],"termid":"GO:1904221"}


id: GO:2000585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010641"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:2000583"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"positive regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"positive regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"positive regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000585"}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: PBO:0076272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 1","termid":"PBO:0076272"}


id: PBO:0028996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_arginine_import","termid":"PBO:0028996"}


id: PBO:0084757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix protein involved in Fe-S cluster biogenesis; facilitates [4Fe-2S] cluster inception into mitochondrial proteins such as lipoate synthase and succinate dehydrogenase; interacts and may function with Grx5p at an early step in Fe-S cluster biosynthesis; forms dimeric complexes with Grx5p and Nfu1p that alter the stability of shared Fe/S clusters; sequence similarity to human BOLA family member, BOLA1 and S. pombe uvi31, a putative DNA repair protein","termid":"PBO:0084757"}


id: PBO:0091309
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Starvation induced ArresT","termid":"PBO:0091309"}


id: PBO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_model_of","termid":"PBO:0034205"}


id: GO:0033900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA precursor into two, leaving 5'-hydroxy and 3'-phosphate groups.","definition_xrefs":["EC:3.1.27.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788","GO:0140098"],"is_obsolete":false,"name":"ribonuclease F activity","secondary_identifiers":["MetaCyc:3.1.27.7-RXN"],"synonyms":[{"name":"RNase F activity","type":"related"},{"name":"ribonuclease F (E. coli) activity","type":"related"}],"termid":"GO:0033900"}


id: PBO:0054133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1499","termid":"PBO:0054133"}


id: PBO:0089178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex ubiquitin-protein ligase E3 subunit Gid2/Rmd5","termid":"PBO:0089178"}


id: GO:0030162
data:
  {"annotated_genes":["SJAG_02485","SJAG_00475","SJAG_02244","SJAG_01131","SJAG_02723","SJAG_00712","SJAG_01528","SJAG_01489","SJAG_01533","SJAG_01544","SJAG_03048","SJAG_00642","SJAG_03699","SJAG_00766","SJAG_00071","SJAG_04477","SJAG_01210","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[85925,102838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[84439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[61290,65310,68141,68687,67211,67013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[98178,92207,104818,107684,113166,102542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[95614,92233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061136"},{"annotations":[110687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01528":null,"SJAG_01533":null,"SJAG_01544":null,"SJAG_02244":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of proteolysis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"regulation of peptidolysis","type":"exact"}],"termid":"GO:0030162","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0061136":null,"GO:1901800":null,"GO:1905785":null,"GO:1905786":null}}


id: GO:0010994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating free ubiquitin chains, compounds composed of a large number of ubiquitin monomers. These chains are not conjugated to a protein.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"free ubiquitin chain polymerization","termid":"GO:0010994"}


id: PR:O60094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myb-binding protein 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03187","PANTHER:PTHR13213:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase V (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.14c","secondary_identifiers":["UniProtKB:O60094"],"synonyms":[{"name":"POL V (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MYBBP1A","type":"exact"}],"termid":"PR:O60094"}


id: PBO:0083721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident protein involved in peroxisomal biogenesis; ER-localized protein that associates with peroxisomes; interacts with Pex30p and reticulons Rtn1p and Yop1p to regulate peroxisome biogenesis from the ER; role in peroxisomal-destined vesicular flow from the ER; regulates peroxisomal size, number and distribution; Pex28p and Pex29p may act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p; forms ER foci upon DNA replication stress","termid":"PBO:0083721"}


id: GO:0009631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases freezing tolerance of an organism in response to low, nonfreezing temperatures.","definition_xrefs":["GOC:syr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cold acclimation","termid":"GO:0009631"}


id: PBO:0005334
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia","termid":"PBO:0005334"}


id: FYPO:0002784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to a salt stress. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during cellular response to salt stress","synonyms":[{"name":"decreased transcription during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced transcription during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0002784"}


id: GO:0003726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule.","definition_xrefs":["GOC:mah","RHEA:10120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine deaminase activity","termid":"GO:0004000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"double-stranded RNA adenosine deaminase activity","secondary_identifiers":["Reactome:R-HSA-77615","EC:3.5.4.37","GO:0003971","Reactome:R-HSA-77614"],"synonyms":[{"name":"double-stranded RNA specific editase activity","type":"related"}],"termid":"GO:0003726"}


id: PBO:0054111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1476","termid":"PBO:0054111"}


id: FYPO:0000147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of establishment or maintenance of cell polarity","termid":"FYPO:0000191"},{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"},{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005568","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal NETO","synonyms":[{"name":"abnormal NETO during vegetative growth","type":"exact"},{"name":"abnormal cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abnormal new end take-off","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0000147"}


id: GO:0090299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"neural crest formation","termid":"GO:0014029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural crest formation","termid":"GO:0090299"}


id: PBO:0017648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, implicated in calcium tranport","termid":"PBO:0017648"}


id: GO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside metabolic process","termid":"GO:0009118"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"positive regulation of nucleoside metabolic process","synonyms":[{"name":"activation of nucleoside metabolic process","type":"narrow"},{"name":"positive regulation of nucleoside metabolism","type":"exact"},{"name":"stimulation of nucleoside metabolic process","type":"narrow"},{"name":"up regulation of nucleoside metabolic process","type":"exact"},{"name":"up-regulation of nucleoside metabolic process","type":"exact"},{"name":"upregulation of nucleoside metabolic process","type":"exact"}],"termid":"GO:0045979"}


id: GO:1903879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11beta-hydroxyprogesterone.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:10802282","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"11beta-hydroxyprogesterone binding","termid":"GO:1903879"}


id: GO:2000943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amylopectin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of amylopectin metabolic process","termid":"GO:2000942"},{"relation_name":"negatively_regulates","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amylopectin metabolic process","synonyms":[{"name":"negative regulation of Amylopectin metabolism","type":"exact"}],"termid":"GO:2000943"}


id: GO:0060618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the nipple over time, from its formation to the mature structure. The nipple is a part of the mammary gland that protrudes from the surface ectoderm.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nipple development","termid":"GO:0060618"}


id: PBO:0051126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-4 (pseudogene)","termid":"PBO:0051126"}


id: GO:0098634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to the extracellular matrix.","definition_xrefs":["Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0098631","GO:0003674"],"is_obsolete":false,"name":"cell-matrix adhesion mediator activity","synonyms":[{"name":"cell-matrix adhesion molecule","type":"exact"},{"name":"protein binding involved in cell-matrix adhesion","type":"exact"}],"termid":"GO:0098634"}


id: GO:0070018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A receptor complex that consists of two transforming growth factor beta (TGF-beta) type I receptor monomers. TGF-beta type I receptor dimers form in the presence or absence of ligand, and can associate with ligand-bound TGF-beta type II receptor dimers.","definition_xrefs":["Reactome:R-HSA-170864"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta type I receptor homodimeric complex (obsolete GO:0070018)","synonyms":[{"name":"TGF-beta type I receptor complex","type":"exact"},{"name":"TGF-beta type I receptor dimer","type":"exact"},{"name":"TGFBR1 homodimer","type":"exact"},{"name":"transforming growth factor beta type I receptor complex","type":"exact"}],"termid":"GO:0070018"}


id: PBO:0003153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Stt3","termid":"PBO:0003153"}


id: PBO:0066931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 233","termid":"PBO:0066931"}


id: GO:0070368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hepatocyte differentiation","termid":"GO:0070366"},{"relation_name":"positively_regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte differentiation","synonyms":[{"name":"activation of hepatocyte differentiation","type":"narrow"},{"name":"positive regulation of liver cell differentiation","type":"exact"},{"name":"stimulation of hepatocyte differentiation","type":"narrow"},{"name":"up regulation of hepatocyte differentiation","type":"exact"},{"name":"up-regulation of hepatocyte differentiation","type":"exact"},{"name":"upregulation of hepatocyte differentiation","type":"exact"}],"termid":"GO:0070368"}


id: PBO:0072108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 6","termid":"PBO:0072108"}


id: FYPO:0003123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is abolished during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nuclear periphery","termid":"FYPO:0002568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nuclear periphery during cellular response to heat","synonyms":[{"name":"abolished protein localisation to nuclear periphery during cellular response to heat","type":"exact"},{"name":"abolished protein localization to nuclear periphery during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear periphery during cellular response to heat during vegetative growth","type":"exact"},{"name":"protein localization to nuclear periphery abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0003123"}


id: PBO:0025430
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Survival Motor Neuron","termid":"PBO:0025430"}


id: GO:0033640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to osmotic stress (obsolete GO:0033640)","termid":"GO:0033640"}


id: PBO:0082531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-2 has a paralog, ASP3-4, that arose from a segmental duplication","termid":"PBO:0082531"}


id: SO:1000047
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion that does not include the centromere.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paracentric","termid":"SO:0001519"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracentric_inversion","synonyms":[{"name":"paracentric inversion","type":"exact"}],"termid":"SO:1000047"}


id: FYPO:0000327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of trichostatin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to trichostatin A","synonyms":[{"name":"resistance to trichostatin A during mitotic cell cycle","type":"related"},{"name":"resistance to trichostatin A during vegetative growth","type":"exact"},{"name":"resistant to trichostatin A","type":"exact"}],"termid":"FYPO:0000327"}


id: GO:1904853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an ascospore wall.","definition_xrefs":["PMID:24623719","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spore cell wall","termid":"GO:0099614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to ascospore wall","synonyms":[{"name":"protein localisation in ascospore wall","type":"exact"},{"name":"protein localisation to ascospore wall","type":"exact"},{"name":"protein localization in ascospore wall","type":"exact"}],"termid":"GO:1904853"}


id: GO:1904652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to cell division site that is involved in cell separation after cytokinesis.","definition_xrefs":["GOC:TermGenie","PMID:25411334","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell division site involved in cell separation after cytokinesis","termid":"GO:1904652"}


id: PBO:0079882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3A","termid":"PBO:0079882"}


id: GO:0043672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, non-sculptured part of the exine which lies below the sexine.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nexine","termid":"GO:0043672"}


id: GO:1900280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.","definition_xrefs":["GOC:TermGenie","GOC:pr","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell costimulation","termid":"GO:1900279"},{"relation_name":"is_a","term_name":"negative regulation of T cell costimulation","termid":"GO:2000524"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, alpha-beta T cell costimulation","termid":"GO:0035783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"down regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"down-regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"downregulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"inhibition of CD4-positive, alpha beta T cell costimulation","type":"narrow"},{"name":"negative regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:1900280"}


id: PBO:0076652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 6","termid":"PBO:0076652"}


id: GO:0009984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: substrate + ATP = substrate-AMP + diphosphate.","definition_xrefs":["PMID:12084835"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate forming enzyme activity (obsolete GO:0009984)","synonyms":[{"name":"adenylate forming enzyme activity","type":"exact"}],"termid":"GO:0009984"}


id: FYPO:0007710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is lower than normal.","definition_xrefs":["PMID:33723569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Ssb1 foci","synonyms":[{"name":"decreased number of RPA foci","type":"exact"},{"name":"decreased number of Rad11 foci","type":"exact"},{"name":"decreased number of Rpa1 foci","type":"exact"},{"name":"decreased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"decreased number of Ssb1 foci during vegetative growth","type":"exact"},{"name":"reduced number of Ssb1 foci","type":"exact"}],"termid":"FYPO:0007710"}


id: GO:0045924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the willingness or readiness of a female to receive male advances.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female mating behavior","termid":"GO:0060180"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity","secondary_identifiers":["GO:0060181"],"synonyms":[{"name":"female receptivity","type":"related"}],"termid":"GO:0045924"}


id: PBO:0052352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4B","termid":"PBO:0052352"}


id: GO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the vacuolar membrane of a vacuole that retains the same shape regardless of cell cycle phase. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"plant-type vacuole lumen","synonyms":[{"name":"lumen of vacuole with cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000330"}


id: GO:0010754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cGMP-mediated signaling","termid":"GO:0010752"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cGMP-mediated signaling","synonyms":[{"name":"negative regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010754"}


id: GO:0016550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The insertion into or deletion from an RNA molecule of nucleotide residues not encoded in DNA; takes place during or after transcription.","definition_xrefs":["PMID:11092837"],"gene_count":0,"genotype_count":0,"name":"obsolete insertion or deletion editing (obsolete GO:0016550)","synonyms":[{"name":"insertion or deletion editing","type":"exact"},{"name":"insertion/deletion editing","type":"exact"}],"termid":"GO:0016550"}


id: GO:0018459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,5R)-carveol + NADP+ = (R)-carvone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.243","RHEA:13629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carveol dehydrogenase activity","secondary_identifiers":["MetaCyc:CARVEOL-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0714","KEGG_REACTION:R03114"],"synonyms":[{"name":"(-)-trans-carveol dehydrogenase activity","type":"related"},{"name":"(-)-trans-carveol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018459"}


id: PATO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality that obtains by virtue of the bearer being concave on one side and convex on the other.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/concavo-convex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavo-convex","synonyms":[{"name":"concavoconvex","type":"exact"}],"termid":"PATO:0002538"}


id: PBO:0070997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 21","termid":"PBO:0070997"}


id: GO:0006191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyinosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"},{"relation_name":"is_a","term_name":"deoxyinosine biosynthetic process","termid":"GO:0046095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyinosine salvage","termid":"GO:0006191"}


id: PBO:0076212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 3","termid":"PBO:0076212"}


id: PBO:0088937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex subunit Gar1","termid":"PBO:0088937"}


id: PBO:0046727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enah/Vasp-like","termid":"PBO:0046727"}


id: GO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052225)","synonyms":[{"name":"energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052225"}


id: PBO:0027019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nalidixic_acid","termid":"PBO:0027019"}


id: PBO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 1","termid":"PBO:0039633"}


id: PBO:0063789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 14","termid":"PBO:0063789"}


id: GO:1902123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-pinoresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:15949826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(-)-pinoresinol metabolic process","termid":"GO:1901598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(-)-pinoresinol catabolic process","synonyms":[{"name":"(-)-pinoresinol breakdown","type":"exact"},{"name":"(-)-pinoresinol catabolism","type":"exact"},{"name":"(-)-pinoresinol degradation","type":"exact"}],"termid":"GO:1902123"}


id: GO:0038087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to an alpha-type platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"VEGF-A/PDGFRalpha signaling","type":"narrow"},{"name":"VEGF-activated PDGFRalpha signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"},{"name":"VEGF/PDGFRalpha signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor-alpha signaling pathway","type":"exact"}],"termid":"GO:0038087"}


id: GO:1902455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["PMID:22969033","GOC:TermGenie","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"negatively_regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stem cell population maintenance","synonyms":[{"name":"down regulation of maintenance of pluripotency","type":"related"},{"name":"down regulation of stem cell maintenance","type":"exact"},{"name":"down-regulation of maintenance of pluripotency","type":"related"},{"name":"down-regulation of stem cell maintenance","type":"exact"},{"name":"downregulation of maintenance of pluripotency","type":"related"},{"name":"downregulation of stem cell maintenance","type":"exact"},{"name":"inhibition of maintenance of pluripotency","type":"related"},{"name":"inhibition of stem cell maintenance","type":"narrow"},{"name":"negative regulation of maintenance of pluripotency","type":"related"}],"termid":"GO:1902455"}


id: GO:0047402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + protein alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine = protein beta-D-galactosyl-L-hydroxylysine + beta-D-glucose. The enzyme specifically hydrolyzes glucose from alpha-D-glucosyl- (1->2)-beta-D-galactosyl disaccharide units that are linked to hydroxylysine residues of collagen and collagen-like proteins.","definition_xrefs":["EC:3.2.1.107","MetaCyc:3.2.1.107-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"protein-glucosylgalactosylhydroxylysine glucosidase activity","secondary_identifiers":["RHEA:11068"],"synonyms":[{"name":"2-O-alpha-D-glucopyranosyl-5-O-alpha-D-galactopyranosylhydroxy-L-lysine glucohydrolase activity","type":"related"},{"name":"protein-alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine glucohydrolase activity","type":"related"}],"termid":"GO:0047402"}


id: PBO:0071932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 9","termid":"PBO:0071932"}


id: PATO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having four angles and four sides.","direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadrangular","termid":"PATO:0001988"}


id: GO:0016872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The catalysis of certain rearrangements of a molecule to break or form a ring.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"intramolecular lyase activity","secondary_identifiers":["EC:5.5.1.-"],"termid":"GO:0016872"}


id: GO:0009744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sucrose","synonyms":[{"name":"response to sucrose stimulus","type":"exact"}],"termid":"GO:0009744"}


id: MOD:00256
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that dioxygenates an L-methionine residue to L-methionine sulfone.","definition_xrefs":["Unimod:425#M","PubMed:7791219","OMSSA:115","PubMed:7786407","RESID:AA0251","PubMed:12686488","PubMed:9252331","DeltaMass:205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-methionine","termid":"MOD:00709"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine sulfone","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfonyl)butanoic acid","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"L-methionine S,S-dioxide","type":"exact"},{"name":"L-methionine sulfone","type":"exact"},{"name":"MOD_RES Methionine sulfone","type":"exact"},{"name":"MetO2","type":"exact"},{"name":"MethionylSulphone","type":"exact"},{"name":"Oxidation of Methionine (to Sulphone)","type":"exact"},{"name":"S,S-dioxymethionine","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"suphonem","type":"exact"}],"termid":"MOD:00256"}


id: PBO:0041087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 3","termid":"PBO:0041087"}


id: PBO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 2","termid":"PBO:0047528"}


id: PBO:0040697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain keto acid dehydrogenase kinase","termid":"PBO:0040697"}


id: PBO:0047567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 18","termid":"PBO:0047567"}


id: PBO:0088614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit Sno1","termid":"PBO:0088614"}


id: PBO:0059062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3A","termid":"PBO:0059062"}


id: GO:0036413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline at position 26 in histone H3.","definition_xrefs":["GOC:als","PMID:22853951"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R26 citrullination (obsolete GO:0036413)","synonyms":[{"name":"histone H3 arginine 26 citrullination","type":"exact"}],"termid":"GO:0036413"}


id: GO:0075137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont organism or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the redox environment in host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host redox environment","synonyms":[{"name":"response of symbiont to host redox environment","type":"exact"}],"termid":"GO:0075137"}


id: GO:0062101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-aspartate + 2-oxoglutarate + O2 = protein 3-hydroxy-L-aspartate + succinate + CO2.","definition_xrefs":["PMID:1856229","PMID:1378441","RHEA:11508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"peptidyl-aspartic acid 3-dioxygenase activity","secondary_identifiers":["MetaCyc:PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN","Reactome:R-HSA-9631355","RESID:AA0026","GO:0004597","EC:1.14.11.16"],"synonyms":[{"name":"aspartate beta-hydroxylase activity","type":"related"},{"name":"aspartyl/asparaginyl beta-hydroxylase activity","type":"related"},{"name":"aspartylpeptide beta-dioxygenase activity","type":"related"},{"name":"peptide-L-aspartate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"peptide-aspartate beta-dioxygenase activity","type":"exact"}],"termid":"GO:0062101"}


id: PBO:0090981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex ubiquitin protein ligase E3 subunit Vps11","termid":"PBO:0090981"}


id: GO:0021910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that results in the spatial identity of regions along the dorsal-ventral axis of the spinal cord.","definition_xrefs":["GOC:tb","PMID:11262869","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in ventral spinal cord patterning","synonyms":[{"name":"hedgehog signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"hh signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"smoothened signalling pathway in ventral spinal cord patterning","type":"exact"}],"termid":"GO:0021910"}


id: PBO:0039404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 5","termid":"PBO:0039404"}


id: PBO:0052017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 7","termid":"PBO:0052017"}


id: FYPO:0001984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"protein absent from cell","termid":"FYPO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein absent from cell during vegetative growth","synonyms":[{"name":"protein absent from cell during mitotic cell cycle","type":"related"},{"name":"undetectable cellular protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0001984"}


id: PBO:0088793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erd1 homolog","termid":"PBO:0088793"}


id: GO:0050885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process controlling balance","synonyms":[{"name":"regulation of balance","type":"related"}],"termid":"GO:0050885"}


id: PBO:0034417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_direct_regulator_(obsolete_requires_direct_regulator)","termid":"PBO:0034417"}


id: PBO:0069457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 722, pseudogene","termid":"PBO:0069457"}


id: PBO:0038309
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_degradation","termid":"PBO:0038309"}


id: FYPO:0000478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic nuclear divisions are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiosis","synonyms":[{"name":"meiosis: normal","type":"related"},{"name":"normal meiotic nuclear division","type":"exact"}],"termid":"FYPO:0000478"}


id: FYPO:0003436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic G2 phase","synonyms":[{"name":"reduced protein kinase activity during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0003436"}


id: PBO:0088318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein, tRNA chaperone Sla1","termid":"PBO:0088318"}


id: GO:0004829
data:
  {"annotated_genes":["SJAG_03585","SJAG_01235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90117,103180],"is_not":false,"summary":null,"term":"GO:0004829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr).","definition_xrefs":["EC:6.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01235":null,"SJAG_03585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0016874","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"threonine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380002","RHEA:24624","MetaCyc:THREONINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380201"],"synonyms":[{"name":"L-threonine:tRNAThr ligase (AMP-forming)","type":"related"},{"name":"TRS","type":"related"},{"name":"threonine translase activity","type":"related"},{"name":"threonine-transfer ribonucleate synthetase activity","type":"related"},{"name":"threonyl ribonucleic synthetase activity","type":"related"},{"name":"threonyl-tRNA synthetase activity","type":"exact"},{"name":"threonyl-transfer RNA synthetase activity","type":"related"},{"name":"threonyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"threonyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004829","terms_by_termid":{"GO:0004829":null}}


id: PBO:0069043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 288, pseudogene","termid":"PBO:0069043"}


id: GO:0015651
data:
  {"annotated_genes":["SJAG_00543","SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015227"},{"annotations":[99476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"quaternary ammonium group transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015202"],"synonyms":[{"name":"quaternary amine transmembrane transporter activity","type":"exact"},{"name":"quaternary ammonium compound transporter activity","type":"exact"}],"termid":"GO:0015651","terms_by_termid":{"GO:0015227":null,"GO:0090422":null}}


id: FYPO:0004016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mitochondrial DNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:2065367","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA content","termid":"FYPO:0001383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular mtDNA level","synonyms":[{"name":"normal mitochondrial DNA content","type":"exact"},{"name":"normal mitochondrial DNA level","type":"exact"},{"name":"normal mtDNA level","type":"exact"},{"name":"normal mtDNA level during mitotic cell cycle","type":"related"},{"name":"normal mtDNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004016"}


id: MOD:01020
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioanisyl","termid":"MOD:01020"}


id: PBO:0013838
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoPantothenate-Cysteine","termid":"PBO:0013838"}


id: PR:O59783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC320.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C320.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.06","synonyms":[{"name":"Spom972h-SPCC320.06","type":"exact"}],"termid":"PR:O59783"}


id: FYPO:0006319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is normal (i.e. indistinguishable from wild type). DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal extent of DNA resection during replication fork processing","synonyms":[{"name":"normal DNA resectioning during replication fork processing","type":"related"},{"name":"normal extent of DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"normal extent of DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"normal extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0006319"}


id: PBO:0055499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2933","termid":"PBO:0055499"}


id: SO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the lysosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"lysosomal_localization_signal","synonyms":[{"name":"lysosomal localization signal","type":"exact"}],"termid":"SO:0001530"}


id: PBO:0040969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 40","termid":"PBO:0040969"}


id: PBO:0076032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32A","termid":"PBO:0076032"}


id: GO:0006888
data:
  {"annotated_genes":["SJAG_04434","SJAG_04739","SJAG_00858","SJAG_02655","SJAG_01409","SJAG_01991","SJAG_02264","SJAG_05344","SJAG_03933","SJAG_00767","SJAG_04070","SJAG_02839","SJAG_02349","SJAG_01642","SJAG_02418","SJAG_00484","SJAG_01003","SJAG_01415","SJAG_02160","SJAG_04021","SJAG_03810","SJAG_04569","SJAG_01508","SJAG_04513","SJAG_01166","SJAG_05013","SJAG_00284","SJAG_04909","SJAG_03499","SJAG_00785","SJAG_03270","SJAG_01899","SJAG_01600","SJAG_03467","SJAG_02103","SJAG_00357","SJAG_03244","SJAG_02539","SJAG_04938","SJAG_00072","SJAG_00330","SJAG_00578","SJAG_03558","SJAG_04402","SJAG_02482","SJAG_05345","SJAG_00899","SJAG_04419","SJAG_03552","SJAG_04196","SJAG_03153","SJAG_02012","SJAG_04592","SJAG_01025","SJAG_02640","SJAG_01570","SJAG_02824","SJAG_04112","SJAG_01279","SJAG_04528","SJAG_01633","SJAG_04740","SJAG_00192","SJAG_04837","SJAG_05326","SJAG_04391","SJAG_03670","SJAG_03907","SJAG_02525","SJAG_04618","SJAG_04615","SJAG_04002","SJAG_04598","SJAG_00557","SJAG_02120","SJAG_00092","SJAG_02234","SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83708,84155,84852,85026,85797,86695,87059,87657,88755,88839,89526,89896,90025,90692,91230,91292,91739,91778,93019,93479,93627,93819,94189,94283,94795,94855,96046,96096,96520,96605,96867,97979,98326,98948,99088,99961,100119,100449,100738,102293,102716,103016,103199,103940,104341,104655,105432,105763,106061,106698,106791,107419,108420,108678,108714,109671,109801,110387,111015,111060,111679,112428,112464,112606,113065,113712,114294,114891,115023],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[91194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[102455],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090114"},{"annotations":[106152,107956,108712,112685,71040,74194,88981],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[107618],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060628"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph","ISBN:0716731363","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":78,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00092":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00330":null,"SJAG_00357":null,"SJAG_00484":null,"SJAG_00557":null,"SJAG_00578":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00858":null,"SJAG_00899":null,"SJAG_00906":null,"SJAG_01003":null,"SJAG_01025":null,"SJAG_01166":null,"SJAG_01279":null,"SJAG_01409":null,"SJAG_01415":null,"SJAG_01508":null,"SJAG_01570":null,"SJAG_01600":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01899":null,"SJAG_01991":null,"SJAG_02012":null,"SJAG_02103":null,"SJAG_02120":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02418":null,"SJAG_02482":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02824":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03244":null,"SJAG_03270":null,"SJAG_03467":null,"SJAG_03499":null,"SJAG_03552":null,"SJAG_03558":null,"SJAG_03670":null,"SJAG_03810":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04070":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04419":null,"SJAG_04434":null,"SJAG_04513":null,"SJAG_04528":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04615":null,"SJAG_04618":null,"SJAG_04739":null,"SJAG_04740":null,"SJAG_04837":null,"SJAG_04909":null,"SJAG_04938":null,"SJAG_05013":null,"SJAG_05326":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum to Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0048221"],"synonyms":[{"name":"ER to Golgi transport","type":"exact"},{"name":"ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"anterograde (ER to Golgi) transport","type":"exact"},{"name":"anterograde transport, ER to Golgi","type":"exact"},{"name":"anterograde transport, endoplasmic reticulum to Golgi","type":"exact"},{"name":"anterograde vesicle-mediated transport, ER to Golgi","type":"exact"},{"name":"anterograde vesicle-mediated transport, endoplasmic reticulum to Golgi","type":"exact"},{"name":"endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"rough ER to cis-Golgi transport","type":"exact"},{"name":"rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:0006888","terms_by_termid":{"GO:0006888":null,"GO:0048208":null,"GO:0060628":null,"GO:0090110":null,"GO:0090114":null}}


id: GO:0061026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of cardiac muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue regeneration","termid":"GO:0061026"}


id: GO:1903933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA primase activity.","definition_xrefs":["GO_REF:0000059","PMID:14766746","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"is_a","term_name":"regulation of DNA primase activity","termid":"GO:1903932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA primase activity","synonyms":[{"name":"down regulation of DNA primase activity","type":"exact"},{"name":"down-regulation of DNA primase activity","type":"exact"},{"name":"downregulation of DNA primase activity","type":"exact"},{"name":"inhibition of DNA primase activity","type":"narrow"}],"termid":"GO:1903933"}


id: PR:Q9UTC0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zym1 gene.","definition_xrefs":["UniProtKB:Q9UTC0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein zym1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.13","synonyms":[{"name":"Spom972h-zym1","type":"exact"}],"termid":"PR:Q9UTC0"}


id: PBO:0029969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029969"}


id: PBO:0060975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC pseudogene 2","termid":"PBO:0060975"}


id: FYPO:0007438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which activation of the mitotic spindle assembly checkpoint begins earlier than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:28017606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"premature activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"advanced activation of mitotic spindle assembly checkpoint","type":"exact"},{"name":"premature activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007438"}


id: PBO:0083423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF HUA1/YGR268C","termid":"PBO:0083423"}


id: PBO:0042389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member b","termid":"PBO:0042389"}


id: GO:0010306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhamnogalacturonan II, a low molecular mass (5 - 10KDa) pectic polysaccharide, conserved in the primary walls of dicotyledenous and monocotyledenous plants and gymnosperms.","definition_xrefs":["PMID:12754267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"},{"relation_name":"is_a","term_name":"cell wall pectin biosynthetic process","termid":"GO:0052325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"rhamnogalacturonan II biosynthetic process","termid":"GO:0010306"}


id: PBO:0052261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 2B","termid":"PBO:0052261"}


id: GO:0051081
data:
  {"annotated_genes":["SJAG_00680","SJAG_00840","SJAG_04578"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007077"},{"annotations":[99501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[99504,89471],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the nuclear membranes, for example during cellular division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"},{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear envelope breakdown","type":"related"},{"name":"nuclear envelope catabolism","type":"related"},{"name":"nuclear envelope degradation","type":"related"},{"name":"nuclear envelope disassembly","type":"related"}],"termid":"GO:0051081","terms_by_termid":{"GO:0007077":null,"GO:0140516":null,"GO:1905557":null}}


id: GO:1901084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pyrrolizidine alkaloid.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid catabolic process (obsolete GO:1901084)","synonyms":[{"name":"pyrrolizidine alkaloid breakdown","type":"exact"},{"name":"pyrrolizidine alkaloid catabolism","type":"exact"},{"name":"pyrrolizidine alkaloid degradation","type":"exact"}],"termid":"GO:1901084"}


id: GO:0047645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: primary alcohol + acceptor = aldehyde + reduced acceptor.","definition_xrefs":["EC:1.1.99.20","MetaCyc:ALKAN-1-OL-DEHYDROGENASE-ACCEPTOR-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkan-1-ol dehydrogenase (acceptor) activity","secondary_identifiers":["RHEA:14685"],"synonyms":[{"name":"alkan-1-ol:(acceptor) oxidoreductase activity","type":"related"},{"name":"alkan-1-ol:acceptor oxidoreductase activity","type":"related"},{"name":"polyethylene glycol dehydrogenase activity","type":"narrow"}],"termid":"GO:0047645"}


id: GO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","PMID:20951801","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"positively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"}


id: GO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.","definition_xrefs":["GOC:go_curators","Pfam:PF00017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SH2 domain binding","termid":"GO:0042169"}


id: GO:0052799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown of a bicyclic nitroimidazole into simpler components in a process that requires coenzyme F420 and produces reactive nitrogen species. Hydride, from reduced coenzyme F420, is added to the bicyclic nitroimidazole, resulting in unstable substances that break down to form three stable products. The elimination of nitrous acid produces the corresponding des-nitroimidazole; hydrolysis produces a related compound; and further reduction creates an aromatic hydroxylamine metabolite that degrades further. These reactions release hyponitrous acid and nitrous acid, which is unstable and disproportionates into nitric oxide (NO) and other reactive nitrogen intermediates.","definition_xrefs":["GOC:mengo_curators","PMID:16387854","PMID:19039139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicyclic nitroimidazole catabolic process","termid":"GO:0052800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:0052799"}


id: SO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion gene that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"engineered_gene","termid":"SO:0000280"},{"relation_name":"is_a","term_name":"fusion_gene","termid":"SO:0000287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_fusion_gene","synonyms":[{"name":"engineered fusion gene","type":"exact"}],"termid":"SO:0000288"}


id: PATO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"male fertility","termid":"PATO:0000279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male semi-sterile","termid":"PATO:0001762"}


id: PBO:0051719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like 6","termid":"PBO:0051719"}


id: PBO:0005384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chk1 protein kinase","termid":"PBO:0005384"}


id: PR:P04689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atb2 gene.","definition_xrefs":["UniProtKB:P04689","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha-2 chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.05c","synonyms":[{"name":"Spom972h-atb2","type":"exact"}],"termid":"PR:P04689"}


id: PR:P40984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-conjugating enzyme UBC9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00437","PANTHER:PTHR24067:SF32","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-conjugating enzyme ubc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.13","secondary_identifiers":["UniProtKB:P40984"],"synonyms":[{"name":"SUMO protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2I","type":"exact"},{"name":"ubiquitin carrier protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin carrier protein hus5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-conjugating enzyme E2-18 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase hus5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40984"}


id: GO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamin diphosphate = ADP + thiamin triphosphate.","definition_xrefs":["MetaCyc:THIAMIN-DIPHOSPHATE-KINASE-RXN","EC:2.7.4.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"thiamine-diphosphate kinase activity","secondary_identifiers":["Reactome:R-HSA-997381","RHEA:11240"],"synonyms":[{"name":"ATP:thiamin-diphosphate phosphotransferase activity","type":"related"},{"name":"ATP:thiamine-diphosphate phosphotransferase activity","type":"related"},{"name":"TDP kinase activity","type":"related"},{"name":"protein bound thiamin diphosphate:ATP phosphoryltransferase activity","type":"related"},{"name":"thiamin diphosphate kinase activity","type":"exact"},{"name":"thiamin diphosphate phosphotransferase activity","type":"related"},{"name":"thiamin pyrophosphate kinase activity","type":"related"},{"name":"thiamin-diphosphate kinase activity","type":"exact"},{"name":"thiamine diphosphate kinase activity","type":"related"}],"termid":"GO:0050331"}


id: PBO:0080526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS protein family homolog 8, pseudogene","termid":"PBO:0080526"}


id: PBO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.75","termid":"PBO:0001832"}


id: PBO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion associated, oncogene regulated","termid":"PBO:0042582"}


id: MOD:01219
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9254591","PubMed:9750125","Unimod:286#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site D","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01219"}


id: PBO:0062398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 21 pseudogene","termid":"PBO:0062398"}


id: GO:0043200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.","definition_xrefs":["GOC:mlg","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amino acid","secondary_identifiers":["GO:0010237"],"synonyms":[{"name":"response to amino acid stimulus","type":"exact"}],"termid":"GO:0043200"}


id: GO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).","definition_xrefs":["GOC:nc","PMID:19581589","PMID:19858100","PMID:19214183","GOC:BHF","GOC:BHF_telomere","PMID:19809492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of extrachromosomal circular DNA","termid":"GO:0001325"},{"relation_name":"part_of","term_name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200","GO:0044085"],"is_obsolete":false,"name":"t-circle formation","synonyms":[{"name":"telomeric circle formation","type":"exact"}],"termid":"GO:0090656"}


id: GO:0052451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the inflammatory response of a symbiont organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont inflammatory response (obsolete GO:0052451)","synonyms":[{"name":"modulation by organism of symbiont inflammatory response","type":"exact"}],"termid":"GO:0052451"}


id: FYPO:0001025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle progression is arrested under conditions where arrest normally occurs.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000631"],"is_obsolete":false,"name":"normally arrested mitotic cell cycle progression","synonyms":[{"name":"normal mitotic cell cycle arrest","type":"exact"}],"termid":"FYPO:0001025"}


id: PR:Q10347
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- any2 gene.","definition_xrefs":["UniProtKB:Q10347","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.05","synonyms":[{"name":"Spom972h-any2","type":"exact"}],"termid":"PR:Q10347"}


id: GO:0009941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast envelope","termid":"GO:0009941"}


id: GO:0008804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NH3 + CO2 = ADP + carbamoyl phosphate.","definition_xrefs":["EC:2.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"carbamate kinase activity","secondary_identifiers":["MetaCyc:CARBAMATE-KINASE-RXN","RHEA:10152"],"synonyms":[{"name":"ATP:carbamate phosphotransferase activity","type":"related"},{"name":"CKase activity","type":"related"},{"name":"carbamoyl phosphokinase activity","type":"related"},{"name":"carbamyl phosphokinase activity","type":"related"}],"termid":"GO:0008804"}


id: GO:0050178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate = enol-phenylpyruvate.","definition_xrefs":["RHEA:17097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylpyruvate tautomerase activity","secondary_identifiers":["EC:5.3.2.1","MetaCyc:PHENYLPYRUVATE-TAUTOMERASE-RXN"],"synonyms":[{"name":"phenylpyruvate keto--enol tautomerase activity","type":"exact"},{"name":"phenylpyruvate keto-enol-isomerase activity","type":"exact"},{"name":"phenylpyruvic keto--enol isomerase activity","type":"exact"}],"termid":"GO:0050178"}


id: PBO:0085351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid-binding protein that interacts with both Ypt7p and Vps33p; may partially counteract the action of Vps33p and vice versa, localizes to the rim of the vacuole as cells approach stationary phase; contains a putative inverse BAR (I-BAR) domain that can mold lipid bilayer membranes into protrusions","termid":"PBO:0085351"}


id: PATO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on a sloping line joining two nonconsecutive points of an entity relative to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diagonal to","termid":"PATO:0002392"}


id: GO:0031945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"positively_regulates","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucocorticoid metabolic process","synonyms":[{"name":"activation of glucocorticoid metabolic process","type":"narrow"},{"name":"positive regulation of glucocorticoid metabolism","type":"exact"},{"name":"stimulation of glucocorticoid metabolic process","type":"narrow"},{"name":"up regulation of glucocorticoid metabolic process","type":"exact"},{"name":"up-regulation of glucocorticoid metabolic process","type":"exact"},{"name":"upregulation of glucocorticoid metabolic process","type":"exact"}],"termid":"GO:0031945"}


id: PBO:0082824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved oxidoreductase involved in lipid droplet morphology; mutant shows defects in CPY processing and vacuolar morphology; required for replication of Brome mosaic virus in S. cerevisiae, a model system for studying replication of positive-strand RNA viruses in their natural hosts; homologus to human RDH12 linked to Leber Congenital Amaurosis","termid":"PBO:0082824"}


id: PBO:0070333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 5","termid":"PBO:0070333"}


id: GO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075079)","termid":"GO:0075079"}


id: PBO:0040968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 39","termid":"PBO:0040968"}


id: PBO:0083552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene CSE1","termid":"PBO:0083552"}


id: FYPO:0005160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression is normal (i.e. indistinguishable from wild type) after exposure to hydroxyurea.","definition_xrefs":["PMID:16849602","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cell cycle progression following cellular response to hydroxyurea","synonyms":[{"name":"normal cell cycle progression following HU exposure","type":"exact"},{"name":"normal cell cycle progression following cellular response to HU","type":"exact"}],"termid":"FYPO:0005160"}


id: SO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that only exists within the promoter region of a eukaryotic gene.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_promoter_element","termid":"SO:0002309"},{"relation_name":"part_of","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core_eukaryotic_promoter_element","synonyms":[{"name":"core eukaryotic promoter element","type":"exact"},{"name":"general transcription factor binding site","type":"related"}],"termid":"SO:0001660"}


id: GO:1903512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytanic acid.","definition_xrefs":["GO_REF:0000068","PMID:16799769","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"methyl-branched fatty acid metabolic process","termid":"GO:0097089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytanic acid metabolic process","synonyms":[{"name":"phytanic acid metabolism","type":"exact"}],"termid":"GO:1903512"}


id: PBO:0073818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 19","termid":"PBO:0073818"}


id: PBO:0038797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3A (pseudogene)","termid":"PBO:0038797"}


id: GO:0035952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of oligopeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17005992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035952)","synonyms":[{"name":"negative regulation of oligopeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of oligopeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035952"}


id: PBO:0068011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 315","termid":"PBO:0068011"}


id: GO:0010438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfur starvation","termid":"GO:0010438"}


id: PBO:0034542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate_synthase_(NADH)_activity","termid":"PBO:0034542"}


id: GO:0015770
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sucrose transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015770","terms_by_termid":{"GO:0106082":null}}


id: PBO:0079601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E4 pseudogene","termid":"PBO:0079601"}


id: SO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon redefined to be the new amino acid, pyrrolysine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_read_through","termid":"SO:0000883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_codon_redefined_as_pyrrolysine","synonyms":[{"name":"stop codon redefined as pyrrolysine","type":"exact"}],"termid":"SO:0000884"}


id: PBO:0017053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U3B","termid":"PBO:0017053"}


id: PBO:0059636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 2","termid":"PBO:0059636"}


id: GO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proteins transported from mitochondria and targeted to cytoplasmic proteasomes for degradation as a response to oxidative stress conditions.","definition_xrefs":["GOC:mcc","PMID:21109188","PMID:21070972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mitochondria-associated ubiquitin-dependent protein catabolic process","synonyms":[{"name":"MAD","type":"exact"},{"name":"mitochondria-associated protein catabolic process","type":"exact"},{"name":"mitochondria-associated protein degradation","type":"exact"},{"name":"mitochondrion-associated protein catabolic process","type":"exact"}],"termid":"GO:0072671"}


id: GO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytotoxic T cell differentiation","synonyms":[{"name":"regulation of cytotoxic T cell development","type":"related"},{"name":"regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045583"}


id: GO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of FasL.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of FasL production","termid":"GO:0045219"},{"relation_name":"positively_regulates","term_name":"FasL biosynthetic process","termid":"GO:0045210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of FasL production","synonyms":[{"name":"activation of FasL biosynthetic process","type":"narrow"},{"name":"positive regulation of FasL anabolism","type":"exact"},{"name":"positive regulation of FasL biosynthesis","type":"exact"},{"name":"positive regulation of FasL biosynthetic process","type":"exact"},{"name":"positive regulation of FasL formation","type":"exact"},{"name":"positive regulation of FasL synthesis","type":"exact"},{"name":"stimulation of FasL biosynthetic process","type":"narrow"},{"name":"up regulation of FasL biosynthetic process","type":"exact"},{"name":"up-regulation of FasL biosynthetic process","type":"exact"},{"name":"upregulation of FasL biosynthetic process","type":"exact"}],"termid":"GO:0045220"}


id: GO:0060687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of prostate gland branching, the process in which the branching structure of the prostate gland is generated and organized. A branch is a division or offshoot from a main stem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in prostate gland morphogenesis","termid":"GO:0060687"}


id: PBO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug123","termid":"PBO:0017067"}


id: PBO:0086316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to ABC transporter family members; lacks predicted membrane-spanning regions; transcriptionally activated by Yrm1p along with genes involved in multidrug resistance","termid":"PBO:0086316"}


id: GO:0033791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA + H2O + acceptor = (24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestan-26-oyl-CoA + reduced acceptor.","definition_xrefs":["EC:1.17.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity","secondary_identifiers":["MetaCyc:1.17.99.3-RXN","RHEA:15733"],"synonyms":[{"name":"(25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA:acceptor 24-oxidoreductase (24R-hydroxylating) activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate 24-hydroxylase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA oxidase activity","type":"related"},{"name":"THC-CoA oxidase activity","type":"related"},{"name":"THCA-CoA oxidase activity","type":"related"},{"name":"trihydroxycoprostanoyl-CoA oxidase activity","type":"related"}],"termid":"GO:0033791"}


id: GO:0097355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to heterochromatin","synonyms":[{"name":"protein localisation to heterochromatin","type":"exact"}],"termid":"GO:0097355"}


id: PBO:0086763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication","termid":"PBO:0086763"}


id: PBO:0073186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein O like, pseudogene","termid":"PBO:0073186"}


id: GO:0042203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"toluene catabolic process","synonyms":[{"name":"toluene breakdown","type":"exact"},{"name":"toluene catabolism","type":"exact"},{"name":"toluene degradation","type":"exact"}],"termid":"GO:0042203"}


id: PBO:0061636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT16 divergent transcript","termid":"PBO:0061636"}


id: PBO:0062334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 73 pseudogene","termid":"PBO:0062334"}


id: PBO:0079583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 4","termid":"PBO:0079583"}


id: FYPO:0007507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in one or more promoter regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:17434129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at promoter during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at promoter during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at promoter during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at promoter during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at promoter during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007507"}


id: GO:1903156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any guanine transmembrane transporter activity that is involved in guanine import into cell.","definition_xrefs":["GOC:dos","GOC:TermGenie","GO_REF:0000061","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine transmembrane transporter activity involved in guanine import into cell (obsolete GO:1903156)","synonyms":[{"name":"guanine transmembrane transporter activity involved in guanine import into cell","type":"exact"}],"termid":"GO:1903156"}


id: FYPO:0003968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that has a larger diameter and volume than normal, then initiates growth from the opposite end of the spore body, and does not go on to form a viable dividing cell. The cell may undergo one or two rounds of nuclear division, but does not undergo cytokinesis.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:9105045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with swollen elongated germ tube","termid":"FYPO:0002911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with swollen elongated germ tube and bidirectional cell growth from spore body","synonyms":[{"name":"inviable after spore germination, without cell division, with swollen elongated cell and bidirectional cell growth from spore body","type":"exact"},{"name":"lethal after spore germination, without cell division, with swollen elongated germ tube and bidirectional cell growth from spore body","type":"exact"}],"termid":"FYPO:0003968"}


id: FYPO:0005351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a guanyl-nucleotide exchange factor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased guanyl-nucleotide exchange factor activity","synonyms":[{"name":"increased GEF activity","type":"exact"}],"termid":"FYPO:0005351"}


id: PBO:0042902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor I","termid":"PBO:0042902"}


id: PBO:0061653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear FMR1 interacting protein 1","termid":"PBO:0061653"}


id: PBO:0030909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030909"}


id: PBO:0027725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_fusion","termid":"PBO:0027725"}


id: SO:1000009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into an other pyrimidine nucleotide, or change of a purine nucleotide, A or G, into an other purine nucleotide.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition","termid":"SO:1000009"}


id: PATO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having high brightness and moderate saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light deep pink","termid":"PATO:0001257"}


id: PBO:0058061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4281","termid":"PBO:0058061"}


id: FYPO:0007356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which Smp focus formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:31811152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal Smp focus formation","synonyms":[{"name":"normal Sme2 focus formation","type":"narrow"},{"name":"normal Smp dot formation","type":"exact"},{"name":"normal Smp focus assembly","type":"exact"}],"termid":"FYPO:0007356"}


id: FYPO:0001562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular histidine level","secondary_identifiers":["FYPO:0001620"],"synonyms":[{"name":"decreased cellular L-histidine level","type":"exact"},{"name":"decreased cellular histidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular histidine level during vegetative growth","type":"exact"},{"name":"decreased histidine accumulation","type":"related"},{"name":"reduced cellular histidine level","type":"exact"}],"termid":"FYPO:0001562"}


id: FYECO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that includes heat shock, i.e. a step in which cells or samples are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping heat shock","termid":"FYECO:0000116"}


